Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-06 01:15:47 (10892): vboxwrapper version 26210
2025-10-06 01:15:47 (10892): BOINC client version: 7.20.2
2025-10-06 01:15:48 (10892): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-10-06 01:15:48 (10892): Successfully copied 'init_data.xml' to the shared directory.
2025-10-06 01:15:49 (10892): Create VM. (boinc_bec955fd7f5dc305, slot#0)
2025-10-06 01:15:49 (10892): Setting Memory Size for VM. (4800MB)
2025-10-06 01:15:49 (10892): Setting CPU Count for VM. (8)
2025-10-06 01:15:50 (10892): Setting Chipset Options for VM.
2025-10-06 01:15:50 (10892): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-06 01:15:50 (10892): Setting Boot Options for VM.
2025-10-06 01:15:51 (10892): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-06 01:15:51 (10892): Enabling VM Network Access.
2025-10-06 01:15:51 (10892): Disabling USB Support for VM.
2025-10-06 01:15:52 (10892): Disabling COM Port Support for VM.
2025-10-06 01:15:52 (10892): Disabling LPT Port Support for VM.
2025-10-06 01:15:52 (10892): Disabling Audio Support for VM.
2025-10-06 01:15:52 (10892): Disabling Clipboard Support for VM.
2025-10-06 01:15:53 (10892): Disabling Drag and Drop Support for VM.
2025-10-06 01:15:53 (10892): Adding storage controller(s) to VM.
2025-10-06 01:15:53 (10892): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-06 01:15:54 (10892): Adding VirtualBox Guest Additions to VM.
2025-10-06 01:15:55 (10892): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-06 01:15:55 (10892): forwarding host port 49193 to guest port 80
2025-10-06 01:15:55 (10892): Enabling remote desktop for VM.
2025-10-06 01:15:55 (10892): Required extension pack not installed, remote desktop not enabled.
2025-10-06 01:15:55 (10892): Enabling shared directory for VM.
2025-10-06 01:15:56 (10892): Starting VM using VBoxManage interface. (boinc_bec955fd7f5dc305, slot#0)
2025-10-06 01:16:02 (10892): Successfully started VM. (PID = '9972')
2025-10-06 01:16:02 (10892): Reporting VM Process ID to BOINC.
2025-10-06 01:16:02 (10892): Guest Log: BIOS: VirtualBox 6.1.36
2025-10-06 01:16:02 (10892): Guest Log: CPUID EDX: 0x178bfbff
2025-10-06 01:16:02 (10892): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-06 01:16:02 (10892): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-06 01:16:02 (10892): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-06 01:16:02 (10892): Detected: Web Application Enabled (http://localhost:49193)
2025-10-06 01:16:02 (10892): Preference change detected
2025-10-06 01:16:02 (10892): Setting CPU throttle for VM. (100%)
2025-10-06 01:16:02 (10892): Setting network throttle for VM. (500000KB)
2025-10-06 01:16:02 (10892): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-06 01:16:04 (10892): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-06 01:16:04 (10892): Guest Log: BIOS: Booting from Hard Disk...
2025-10-06 01:16:07 (10892): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-06 01:16:07 (10892): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-06 01:16:07 (10892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-06 01:16:15 (10892): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-06 01:16:15 (10892): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-06 01:16:21 (10892): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-06 01:16:21 (10892): Guest Log: 00:00:00.000183 main     Log opened 2025-10-06T01:16:19.737119000Z
2025-10-06 01:16:21 (10892): Guest Log: 00:00:00.000294 main     OS Product: Linux
2025-10-06 01:16:21 (10892): Guest Log: 00:00:00.000329 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-06 01:16:21 (10892): Guest Log: 00:00:00.000358 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-06 01:16:21 (10892): Guest Log: 00:00:00.000388 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-06 01:16:21 (10892): Guest Log: 00:00:00.000389 main     Process ID: 1367
2025-10-06 01:16:21 (10892): Guest Log: 00:00:00.000389 main     Package type: LINUX_64BITS_GENERIC
2025-10-06 01:16:21 (10892): Guest Log: 00:00:00.001308 main     5.2.32 r132073 started. Verbose level = 0
2025-10-06 01:16:21 (10892): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-06 01:16:21 (10892): Guest Log: [INFO] Mounting shared directory
2025-10-06 01:16:21 (10892): Guest Log: [INFO] Checking for init_data.xml
2025-10-06 01:16:26 (10892): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-06 01:16:26 (10892): Guest Log: [INFO] Detected branch: prod
2025-10-06 01:16:26 (10892): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-06 01:16:26 (10892): Guest Log: Copying input files
2025-10-06 01:16:27 (10892): Guest Log: Copied input files into RunAtlas.
2025-10-06 01:16:27 (10892): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-06 01:16:27 (10892): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-06 01:16:27 (10892): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-06 01:16:27 (10892): Guest Log: Further information can be found at the LHC@home message board.
2025-10-06 01:16:31 (10892): Guest Log: 00:00:10.004148 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 210 968 302 000ns (GuestNow=1 759 738 590 709 169 000 ns GuestLast=1 759 713 379 740 867 000 ns fSetTimeLastLoop=true )
2025-10-06 01:16:37 (10892): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-06 01:16:38 (10892): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-06 01:16:38 (10892): Guest Log: 2.6.3.0 1648 0 32216 151392 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-06 01:16:39 (10892): Guest Log: copied the webapp to /var/www
2025-10-06 01:16:39 (10892): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-06 01:16:39 (10892): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-06 01:16:39 (10892): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-06 01:16:39 (10892): Guest Log:  *** Starting ATLAS job. (PandaID=6826449190 taskID=46373048) ***
2025-10-06 02:37:57 (10892): VM state change detected. (old = 'running', new = 'paused')
2025-10-06 03:42:04 (10892): VM state change detected. (old = 'paused', new = 'running')
2025-10-06 03:42:10 (10892): Guest Log: 01:21:40.712101 timesync vgsvcTimeSyncWorker: Radical host time change: 3 850 774 000 000ns (HostNow=1 759 747 304 267 000 000 ns HostLast=1 759 743 453 493 000 000 ns)
2025-10-06 03:42:20 (10892): Guest Log: 01:21:50.714618 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 832 852 944 000ns (GuestNow=1 759 747 314 269 626 000 ns GuestLast=1 759 743 481 416 682 000 ns fSetTimeLastLoop=true )
2025-10-06 04:01:21 (10892): Status Report: Elapsed Time: '6000.000000'
2025-10-06 04:01:21 (10892): Status Report: CPU Time: '41004.265625'
2025-10-06 04:47:29 (10892): VM state change detected. (old = 'running', new = 'paused')
2025-10-06 04:52:41 (10892): VM state change detected. (old = 'paused', new = 'running')
2025-10-06 05:24:33 (10892): Guest Log:  *** Job finished ***
2025-10-06 05:24:33 (10892): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:42,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:42,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:49,585 | INFO     | [monitor] cgroup control has ended
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:49,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509613954880)>', '<ExcThread(monitor, started 140508865206016)>']
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:50,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:50,119 | INFO     | [monitor] control thread has ended
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:54,783 | INFO     | all workflow threads have been joined
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:54,783 | INFO     | end of generic workflow (traces error code: 0)
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:54,783 | INFO     | traces error code: 0
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:54,783 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:54,869 [wrapper] ==== pilot stdout END ====
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:54,876 [wrapper] ==== wrapper stdout RESUME ====
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:54,884 [wrapper] pilotpid: 6086
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:54,892 [wrapper] Pilot exit status: 0
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:54,982 [wrapper] pandaids: 6826449190
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:55,024 [wrapper] cleanup supervisor_pilot 10899 6087
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:55,031 [wrapper] Test setup, not cleaning
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:55,040 [wrapper] apfmon messages muted
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:55,048 [wrapper] ==== wrapper stdout END ====
2025-10-06 05:24:33 (10892): Guest Log: 2025-10-06 12:18:55,055 [wrapper] ==== wrapper stderr END ====
2025-10-06 05:24:33 (10892): Guest Log:  *** Error codes and diagnostics ***
2025-10-06 05:24:33 (10892): Guest Log:     "exeErrorCode": 0,
2025-10-06 05:24:33 (10892): Guest Log:     "exeErrorDiag": "",
2025-10-06 05:24:33 (10892): Guest Log:     "pilotErrorCode": 0,
2025-10-06 05:24:33 (10892): Guest Log:     "pilotErrorDiag": "",
2025-10-06 05:24:33 (10892): Guest Log:  *** Listing of results directory ***
2025-10-06 05:24:33 (10892): Guest Log: total 205560
2025-10-06 05:24:33 (10892): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  1 12:55 pilot3.tar.gz
2025-10-06 05:24:33 (10892): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  1 13:15 queuedata.json
2025-10-06 05:24:33 (10892): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  1 13:16 runpilot2-wrapper.sh
2025-10-06 05:24:33 (10892): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  6 08:16 start_atlas.sh
2025-10-06 05:24:33 (10892): Guest Log: -rwxr-xr-x. 1 atlas atlas    565609 Oct  6 08:16 input.tar.gz
2025-10-06 05:24:33 (10892): Guest Log: -rwxr-xr-x. 1 atlas atlas      5963 Oct  6 08:16 init_data.xml
2025-10-06 05:24:33 (10892): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  6 08:16 EVNT.46373045._002794.pool.root.1 -> /data/./ATLAS.root_0
2025-10-06 05:24:33 (10892): Guest Log: -rw-r--r--. 1 atlas atlas      2538 Oct  6 08:16 pandaJob.out
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas    975027 Oct  6 08:17 agis_schedconf.cvmfs.json
2025-10-06 05:24:33 (10892): Guest Log: drwx------. 4 atlas atlas      4096 Oct  6 08:17 pilot3
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas 203053443 Oct  6 12:17 HITS.46373048._082669.pool.root.1
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas      1029 Oct  6 12:17 memory_monitor_summary.json
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  6 12:17 agis_ddmendpoints.agis.ALL.json
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas    412939 Oct  6 12:17 log.46373048._082669.job.log.tgz.1
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas        97 Oct  6 12:17 pilot_heartbeat.json
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas      7799 Oct  6 12:18 heartbeat.json
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas      5063 Oct  6 12:18 pilotlog.txt
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas   1399809 Oct  6 12:18 log.46373048._082669.job.log.1
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas       357 Oct  6 12:18 output.list
2025-10-06 05:24:33 (10892): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  6 12:18 runtime_log
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas   1832960 Oct  6 12:18 result.tar.gz
2025-10-06 05:24:33 (10892): Guest Log: -rw-r--r--. 1 atlas atlas      8670 Oct  6 12:18 runtime_log.err
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas       669 Oct  6 12:18 BJPMDmasBO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmt2BNDmBrltDo.diag
2025-10-06 05:24:33 (10892): Guest Log: Looking for outputfile HITS.46373048._082669.pool.root.1
2025-10-06 05:24:33 (10892): Guest Log: HITS file was successfully produced
2025-10-06 05:24:33 (10892): Guest Log: -rw-------. 1 atlas atlas 203053443 Oct  6 12:17 /home/atlas/RunAtlas/HITS.46373048._082669.pool.root.1
2025-10-06 05:24:34 (10892): Guest Log: Successfully finished the ATLAS job!
2025-10-06 05:24:34 (10892): Guest Log: Copying the results back to the shared directory!
2025-10-06 05:24:34 (10892): Guest Log:  *** Contents of shared directory: ***
2025-10-06 05:24:34 (10892): Guest Log: total 416348
2025-10-06 05:24:34 (10892): Guest Log: -rwxrwxrwx. 1 root root 220852238 Oct  6 08:15 ATLAS.root_0
2025-10-06 05:24:34 (10892): Guest Log: -rwxrwxrwx. 1 root root 203053443 Oct  6  2025 HITS.pool.root.1
2025-10-06 05:24:34 (10892): Guest Log: -rwxrwxrwx. 1 root root      5963 Oct  6 08:15 init_data.xml
2025-10-06 05:24:34 (10892): Guest Log: -rwxrwxrwx. 1 root root    565609 Oct  1 19:56 input.tar.gz
2025-10-06 05:24:34 (10892): Guest Log: -rwxrwxrwx. 1 root root   1832960 Oct  6  2025 result.tar.gz
2025-10-06 05:24:34 (10892): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  1 19:56 start_atlas.sh
2025-10-06 05:24:34 (10892): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-06 05:24:34 (10892): VM Completion File Detected.
2025-10-06 05:24:34 (10892): Powering off VM.
2025-10-06 05:24:35 (10892): Successfully stopped VM.
2025-10-06 05:24:35 (10892): Deregistering VM. (boinc_bec955fd7f5dc305, slot#0)
2025-10-06 05:24:35 (10892): Removing network bandwidth throttle group from VM.
2025-10-06 05:24:35 (10892): Removing VM from VirtualBox.
2025-10-06 05:24:41 (10892): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN