Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-05 00:39:56 (10616): vboxwrapper version 26210
2025-10-05 00:39:56 (10616): BOINC client version: 7.20.2
2025-10-05 00:39:57 (10616): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-10-05 00:39:57 (10616): Successfully copied 'init_data.xml' to the shared directory.
2025-10-05 00:39:58 (10616): Create VM. (boinc_70379dec9b0ba230, slot#0)
2025-10-05 00:39:58 (10616): Setting Memory Size for VM. (4800MB)
2025-10-05 00:39:58 (10616): Setting CPU Count for VM. (8)
2025-10-05 00:39:59 (10616): Setting Chipset Options for VM.
2025-10-05 00:39:59 (10616): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-05 00:39:59 (10616): Setting Boot Options for VM.
2025-10-05 00:40:00 (10616): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-05 00:40:00 (10616): Enabling VM Network Access.
2025-10-05 00:40:00 (10616): Disabling USB Support for VM.
2025-10-05 00:40:01 (10616): Disabling COM Port Support for VM.
2025-10-05 00:40:01 (10616): Disabling LPT Port Support for VM.
2025-10-05 00:40:01 (10616): Disabling Audio Support for VM.
2025-10-05 00:40:01 (10616): Disabling Clipboard Support for VM.
2025-10-05 00:40:02 (10616): Disabling Drag and Drop Support for VM.
2025-10-05 00:40:02 (10616): Adding storage controller(s) to VM.
2025-10-05 00:40:02 (10616): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-05 00:40:03 (10616): Adding VirtualBox Guest Additions to VM.
2025-10-05 00:40:04 (10616): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-05 00:40:04 (10616): forwarding host port 61181 to guest port 80
2025-10-05 00:40:04 (10616): Enabling remote desktop for VM.
2025-10-05 00:40:04 (10616): Required extension pack not installed, remote desktop not enabled.
2025-10-05 00:40:04 (10616): Enabling shared directory for VM.
2025-10-05 00:40:05 (10616): Starting VM using VBoxManage interface. (boinc_70379dec9b0ba230, slot#0)
2025-10-05 00:40:11 (10616): Successfully started VM. (PID = '5904')
2025-10-05 00:40:11 (10616): Reporting VM Process ID to BOINC.
2025-10-05 00:40:11 (10616): Guest Log: BIOS: VirtualBox 6.1.36
2025-10-05 00:40:11 (10616): Guest Log: CPUID EDX: 0x178bfbff
2025-10-05 00:40:11 (10616): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-05 00:40:11 (10616): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-05 00:40:11 (10616): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-05 00:40:11 (10616): Detected: Web Application Enabled (http://localhost:61181)
2025-10-05 00:40:11 (10616): Preference change detected
2025-10-05 00:40:11 (10616): Setting CPU throttle for VM. (100%)
2025-10-05 00:40:11 (10616): Setting network throttle for VM. (500000KB)
2025-10-05 00:40:11 (10616): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-05 00:40:13 (10616): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-05 00:40:13 (10616): Guest Log: BIOS: Booting from Hard Disk...
2025-10-05 00:40:16 (10616): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-05 00:40:16 (10616): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-05 00:40:16 (10616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-05 00:40:23 (10616): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-05 00:40:23 (10616): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-05 00:40:30 (10616): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-05 00:40:30 (10616): Guest Log: 00:00:00.000162 main     Log opened 2025-10-05T00:40:28.255243000Z
2025-10-05 00:40:30 (10616): Guest Log: 00:00:00.000265 main     OS Product: Linux
2025-10-05 00:40:30 (10616): Guest Log: 00:00:00.000299 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-05 00:40:30 (10616): Guest Log: 00:00:00.000328 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-05 00:40:30 (10616): Guest Log: 00:00:00.000357 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-05 00:40:30 (10616): Guest Log: 00:00:00.000358 main     Process ID: 1371
2025-10-05 00:40:30 (10616): Guest Log: 00:00:00.000359 main     Package type: LINUX_64BITS_GENERIC
2025-10-05 00:40:30 (10616): Guest Log: 00:00:00.001152 main     5.2.32 r132073 started. Verbose level = 0
2025-10-05 00:40:30 (10616): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-05 00:40:30 (10616): Guest Log: [INFO] Mounting shared directory
2025-10-05 00:40:30 (10616): Guest Log: [INFO] Checking for init_data.xml
2025-10-05 00:40:34 (10616): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-05 00:40:34 (10616): Guest Log: [INFO] Detected branch: prod
2025-10-05 00:40:35 (10616): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-05 00:40:35 (10616): Guest Log: Copying input files
2025-10-05 00:40:36 (10616): Guest Log: Copied input files into RunAtlas.
2025-10-05 00:40:36 (10616): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-05 00:40:36 (10616): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-05 00:40:36 (10616): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-05 00:40:36 (10616): Guest Log: Further information can be found at the LHC@home message board.
2025-10-05 00:40:40 (10616): Guest Log: 00:00:10.004858 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 034 821 000ns (GuestNow=1 759 650 039 292 353 000 ns GuestLast=1 759 624 828 257 532 000 ns fSetTimeLastLoop=true )
2025-10-05 00:40:46 (10616): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-05 00:40:47 (10616): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-05 00:40:47 (10616): Guest Log: 2.6.3.0 1650 0 32168 151355 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-05 00:40:48 (10616): Guest Log: copied the webapp to /var/www
2025-10-05 00:40:48 (10616): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-05 00:40:48 (10616): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-05 00:40:48 (10616): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-05 00:40:48 (10616): Guest Log:  *** Starting ATLAS job. (PandaID=6826358039 taskID=46373048) ***
2025-10-05 01:40:50 (10616): VM state change detected. (old = 'running', new = 'paused')
2025-10-05 13:12:27 (10616): VM state change detected. (old = 'paused', new = 'running')
2025-10-05 13:12:29 (10616): Guest Log: 01:00:21.598923 timesync vgsvcTimeSyncWorker: Radical host time change: 41 500 952 000 000ns (HostNow=1 759 695 099 287 000 000 ns HostLast=1 759 653 598 335 000 000 ns)
2025-10-05 13:12:39 (10616): Guest Log: 01:00:31.600152 timesync vgsvcTimeSyncWorker: Radical guest time change: 41 458 402 973 000ns (GuestNow=1 759 695 109 288 829 000 ns GuestLast=1 759 653 650 885 856 000 ns fSetTimeLastLoop=true )
2025-10-05 13:53:09 (10616): Status Report: Elapsed Time: '6000.000000'
2025-10-05 13:53:09 (10616): Status Report: CPU Time: '42689.843750'
2025-10-05 14:13:27 (10616): VM state change detected. (old = 'running', new = 'paused')
2025-10-05 18:21:34 (10616): VM state change detected. (old = 'paused', new = 'running')
2025-10-05 18:21:35 (10616): Guest Log: 02:01:22.878082 timesync vgsvcTimeSyncWorker: Radical host time change: 14 891 380 000 000ns (HostNow=1 759 713 635 697 000 000 ns HostLast=1 759 698 744 317 000 000 ns)
2025-10-05 18:21:45 (10616): Guest Log: 02:01:32.886050 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 885 139 277 000ns (GuestNow=1 759 713 645 705 498 000 ns GuestLast=1 759 698 760 566 221 000 ns fSetTimeLastLoop=true )
2025-10-05 19:14:49 (10616): Guest Log:  *** Job finished ***
2025-10-05 19:14:49 (10616): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:37,903 | INFO     | [payload] control thread has finished
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:41,339 | INFO     | [data] queue_monitor thread has finished
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:44,210 | INFO     | [monitor] cgroup control has ended
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:44,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816172910400)>', '<ExcThread(monitor, started 139815597102848)>']
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:45,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:45,766 | INFO     | [monitor] control thread has ended
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:49,911 | INFO     | all workflow threads have been joined
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:49,912 | INFO     | end of generic workflow (traces error code: 0)
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:49,912 | INFO     | traces error code: 0
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:49,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:50,024 [wrapper] ==== pilot stdout END ====
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:50,031 [wrapper] ==== wrapper stdout RESUME ====
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:50,037 [wrapper] pilotpid: 6085
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:50,044 [wrapper] Pilot exit status: 0
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:50,135 [wrapper] pandaids: 6826358039
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:50,179 [wrapper] cleanup supervisor_pilot 10933 6086
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:50,188 [wrapper] Test setup, not cleaning
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:50,195 [wrapper] apfmon messages muted
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:50,202 [wrapper] ==== wrapper stdout END ====
2025-10-05 19:14:49 (10616): Guest Log: 2025-10-06 02:13:50,209 [wrapper] ==== wrapper stderr END ====
2025-10-05 19:14:49 (10616): Guest Log:  *** Error codes and diagnostics ***
2025-10-05 19:14:49 (10616): Guest Log:     "exeErrorCode": 0,
2025-10-05 19:14:49 (10616): Guest Log:     "exeErrorDiag": "",
2025-10-05 19:14:49 (10616): Guest Log:     "pilotErrorCode": 0,
2025-10-05 19:14:49 (10616): Guest Log:     "pilotErrorDiag": "",
2025-10-05 19:14:49 (10616): Guest Log:  *** Listing of results directory ***
2025-10-05 19:14:49 (10616): Guest Log: total 199856
2025-10-05 19:14:49 (10616): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  1 06:22 pilot3.tar.gz
2025-10-05 19:14:49 (10616): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  1 06:48 runpilot2-wrapper.sh
2025-10-05 19:14:49 (10616): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  1 06:48 queuedata.json
2025-10-05 19:14:49 (10616): Guest Log: -rwxr-xr-x. 1 atlas atlas      5963 Oct  5 07:40 init_data.xml
2025-10-05 19:14:49 (10616): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  5 07:40 start_atlas.sh
2025-10-05 19:14:49 (10616): Guest Log: -rwxr-xr-x. 1 atlas atlas    565599 Oct  5 07:40 input.tar.gz
2025-10-05 19:14:49 (10616): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  5 07:40 EVNT.46373045._002625.pool.root.1 -> /data/./ATLAS.root_0
2025-10-05 19:14:49 (10616): Guest Log: -rw-r--r--. 1 atlas atlas      2538 Oct  5 07:40 pandaJob.out
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas    973982 Oct  5 07:41 agis_schedconf.cvmfs.json
2025-10-05 19:14:49 (10616): Guest Log: drwx------. 4 atlas atlas      4096 Oct  5 07:41 pilot3
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas 197335972 Oct  6 02:12 HITS.46373048._078364.pool.root.1
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas      1027 Oct  6 02:13 memory_monitor_summary.json
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  6 02:13 agis_ddmendpoints.agis.ALL.json
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas    392828 Oct  6 02:13 log.46373048._078364.job.log.tgz.1
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas        98 Oct  6 02:13 pilot_heartbeat.json
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas      7794 Oct  6 02:13 heartbeat.json
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas      4798 Oct  6 02:13 pilotlog.txt
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas   1362820 Oct  6 02:13 log.46373048._078364.job.log.1
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas       357 Oct  6 02:13 output.list
2025-10-05 19:14:49 (10616): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  6 02:13 runtime_log
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas   1771520 Oct  6 02:13 result.tar.gz
2025-10-05 19:14:49 (10616): Guest Log: -rw-r--r--. 1 atlas atlas      8670 Oct  6 02:13 runtime_log.err
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas       668 Oct  6 02:13 ej2LDmVo5N8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKLBNDmqk6tMn.diag
2025-10-05 19:14:49 (10616): Guest Log: Looking for outputfile HITS.46373048._078364.pool.root.1
2025-10-05 19:14:49 (10616): Guest Log: HITS file was successfully produced
2025-10-05 19:14:49 (10616): Guest Log: -rw-------. 1 atlas atlas 197335972 Oct  6 02:12 /home/atlas/RunAtlas/HITS.46373048._078364.pool.root.1
2025-10-05 19:14:50 (10616): Guest Log: Successfully finished the ATLAS job!
2025-10-05 19:14:50 (10616): Guest Log: Copying the results back to the shared directory!
2025-10-05 19:14:51 (10616): Guest Log:  *** Contents of shared directory: ***
2025-10-05 19:14:51 (10616): Guest Log: total 412920
2025-10-05 19:14:51 (10616): Guest Log: -rwxrwxrwx. 1 root root 223124554 Oct  5 07:39 ATLAS.root_0
2025-10-05 19:14:51 (10616): Guest Log: -rwxrwxrwx. 1 root root 197335972 Oct  6  2025 HITS.pool.root.1
2025-10-05 19:14:51 (10616): Guest Log: -rwxrwxrwx. 1 root root      5963 Oct  5 07:39 init_data.xml
2025-10-05 19:14:51 (10616): Guest Log: -rwxrwxrwx. 1 root root    565599 Oct  1 14:15 input.tar.gz
2025-10-05 19:14:51 (10616): Guest Log: -rwxrwxrwx. 1 root root   1771520 Oct  6  2025 result.tar.gz
2025-10-05 19:14:51 (10616): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  1 14:15 start_atlas.sh
2025-10-05 19:14:51 (10616): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-05 19:14:51 (10616): VM Completion File Detected.
2025-10-05 19:14:51 (10616): Powering off VM.
2025-10-05 19:14:52 (10616): Successfully stopped VM.
2025-10-05 19:14:52 (10616): Deregistering VM. (boinc_70379dec9b0ba230, slot#0)
2025-10-05 19:14:52 (10616): Removing network bandwidth throttle group from VM.
2025-10-05 19:14:52 (10616): Removing VM from VirtualBox.
2025-10-05 19:14:58 (10616): called boinc_finish(0)

</stderr_txt>
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