Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:22:01 (3137015): wrapper (7.7.26015): starting
12:22:01 (3137015): wrapper: running run_atlas (--nthreads 8)
[2025-10-01 12:22:01] Arguments: --nthreads 8
[2025-10-01 12:22:01] Threads: 8
[2025-10-01 12:22:01] Checking for CVMFS
[2025-10-01 12:22:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-01 12:22:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-01 12:22:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-01 12:22:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-01 12:22:01] 2.13.2.0 807844 113654 551484 151224 1 297 13342174 25181184 9164 16776704 0 59469214 99.559 63089589 27597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-01 12:22:01] CVMFS is ok
[2025-10-01 12:22:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-01 12:22:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-01 12:22:01] Further information can be found at the LHC@home message board.
[2025-10-01 12:22:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-01 12:22:01] Checking for apptainer binary...
[2025-10-01 12:22:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-01 12:22:01] Running /usr/bin/apptainer --version
[2025-10-01 12:22:01] apptainer version 1.4.2-1.el9
[2025-10-01 12:22:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-01 12:22:02] c-16-38.aglt2.org
[2025-10-01 12:22:02] apptainer works
[2025-10-01 12:22:02] Set ATHENA_PROC_NUMBER=8
[2025-10-01 12:22:02] Set ATHENA_CORE_NUMBER=8
[2025-10-01 12:22:02] Starting ATLAS job with PandaID=6826241954
[2025-10-01 12:22:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:12:17 (2456782): wrapper (7.7.26015): starting
12:12:17 (2456782): wrapper: running run_atlas (--nthreads 8)
[2025-10-04 12:12:17] Arguments: --nthreads 8
[2025-10-04 12:12:17] Threads: 8
[2025-10-04 12:12:17] This job has been restarted, cleaning up previous attempt
[2025-10-04 12:12:17] Checking for CVMFS
[2025-10-04 12:12:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-04 12:12:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-04 12:12:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-04 12:12:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-04 12:12:20] 2.13.2.0 807844 117964 740552 151333 3 369 19902491 25180367 44622 16776704 0 73476338 99.538 82487329 26884 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-04 12:12:20] CVMFS is ok
[2025-10-04 12:12:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-04 12:12:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-04 12:12:20] Further information can be found at the LHC@home message board.
[2025-10-04 12:12:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-04 12:12:20] Checking for apptainer binary...
[2025-10-04 12:12:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-04 12:12:20] Running /usr/bin/apptainer --version
[2025-10-04 12:12:21] apptainer version 1.4.2-1.el9
[2025-10-04 12:12:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-04 12:12:22] c-16-38.aglt2.org
[2025-10-04 12:12:22] apptainer works
[2025-10-04 12:12:22] Set ATHENA_PROC_NUMBER=8
[2025-10-04 12:12:22] Set ATHENA_CORE_NUMBER=8
[2025-10-04 12:12:22] Starting ATLAS job with PandaID=6826241954
[2025-10-04 12:12:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 11:19:28]  *** The last 200 lines of the pilot log: ***
[2025-10-05 11:19:28] 2025-10-05 15:18:14,365 | INFO     | sum of square deviations: 776555882073.1224
[2025-10-05 11:19:28] 2025-10-05 15:18:14,692 | INFO     | sum of deviations: -494218652065.00433
[2025-10-05 11:19:28] 2025-10-05 15:18:14,692 | INFO     | mean x: 1759635990.90648
[2025-10-05 11:19:28] 2025-10-05 15:18:14,692 | INFO     | mean y: 2150939.614138439
[2025-10-05 11:19:28] 2025-10-05 15:18:14,692 | INFO     | -- intersect: 1122025178.7084742
[2025-10-05 11:19:28] 2025-10-05 15:18:14,693 | INFO     | intersect: 1122025178.7084742
[2025-10-05 11:19:28] 2025-10-05 15:18:14,717 | INFO     | chi2: 7.028205238310971
[2025-10-05 11:19:28] 2025-10-05 15:18:14,719 | INFO     | sum of square deviations: 768010258993.518
[2025-10-05 11:19:28] 2025-10-05 15:18:15,237 | INFO     | sum of deviations: -184001439912.39987
[2025-10-05 11:19:28] 2025-10-05 15:18:15,238 | INFO     | mean x: 1759635838.4109387
[2025-10-05 11:19:28] 2025-10-05 15:18:15,251 | INFO     | mean y: 2156470.9053954175
[2025-10-05 11:19:28] 2025-10-05 15:18:15,251 | INFO     | -- intersect: 423733558.18725735
[2025-10-05 11:19:28] 2025-10-05 15:18:15,252 | INFO     | intersect: 423733558.18725735
[2025-10-05 11:19:28] 2025-10-05 15:18:15,253 | INFO     | chi2: 3.982658992994251
[2025-10-05 11:19:28] 2025-10-05 15:18:15,254 | INFO     | current chi2=3.982658992994251 (change=43.333200184811766 %)
[2025-10-05 11:19:28] 2025-10-05 15:18:15,294 | INFO     | sum of square deviations: 759527319366.8445
[2025-10-05 11:19:28] 2025-10-05 15:18:15,746 | INFO     | sum of deviations: -108129741786.1697
[2025-10-05 11:19:28] 2025-10-05 15:18:15,761 | INFO     | mean x: 1759635685.9132047
[2025-10-05 11:19:28] 2025-10-05 15:18:15,762 | INFO     | mean y: 2157832.981454006
[2025-10-05 11:19:28] 2025-10-05 15:18:15,762 | INFO     | -- intersect: 252667521.71014383
[2025-10-05 11:19:28] 2025-10-05 15:18:15,762 | INFO     | intersect: 252667521.71014383
[2025-10-05 11:19:28] 2025-10-05 15:18:15,764 | INFO     | chi2: 3.7593542415667254
[2025-10-05 11:19:28] 2025-10-05 15:18:15,764 | INFO     | current chi2=3.7593542415667254 (change=5.606926222414042 %)
[2025-10-05 11:19:28] 2025-10-05 15:18:15,764 | INFO     | right removable region: 1347
[2025-10-05 11:19:28] 2025-10-05 15:18:15,781 | INFO     | sum of square deviations: 768009176485.6964
[2025-10-05 11:19:28] 2025-10-05 15:18:15,797 | INFO     | time since job start (83076s) is within the limit (172800.0s)
[2025-10-05 11:19:28] 2025-10-05 15:18:15,798 | INFO     | 83082s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-05 11:19:28] 2025-10-05 15:18:16,045 | INFO     | sum of deviations: -797025824857.6709
[2025-10-05 11:19:28] 2025-10-05 15:18:16,046 | INFO     | mean x: 1759636143.4116778
[2025-10-05 11:19:28] 2025-10-05 15:18:16,046 | INFO     | mean y: 2156339.29563932
[2025-10-05 11:19:28] 2025-10-05 15:18:16,046 | INFO     | -- intersect: 1828274426.9330769
[2025-10-05 11:19:28] 2025-10-05 15:18:16,046 | INFO     | intersect: 1828274426.9330769
[2025-10-05 11:19:28] 2025-10-05 15:18:16,048 | INFO     | chi2: 4.453978756725736
[2025-10-05 11:19:28] 2025-10-05 15:18:16,093 | INFO     | current chi2=4.453978756725736 (change=36.627081798252625 %)
[2025-10-05 11:19:28] 2025-10-05 15:18:16,095 | INFO     | sum of square deviations: 759525402310.6927
[2025-10-05 11:19:28] 2025-10-05 15:18:16,555 | INFO     | sum of deviations: -884493074513.8773
[2025-10-05 11:19:28] 2025-10-05 15:18:16,555 | INFO     | mean x: 1759636295.916914
[2025-10-05 11:19:28] 2025-10-05 15:18:16,555 | INFO     | mean y: 2157910.3850148367
[2025-10-05 11:19:28] 2025-10-05 15:18:16,556 | INFO     | -- intersect: 2051314018.4846148
[2025-10-05 11:19:28] 2025-10-05 15:18:16,556 | INFO     | intersect: 2051314018.4846148
[2025-10-05 11:19:28] 2025-10-05 15:18:16,557 | INFO     | chi2: 4.2036742203053095
[2025-10-05 11:19:28] 2025-10-05 15:18:16,558 | INFO     | current chi2=4.2036742203053095 (change=5.6197963684145 %)
[2025-10-05 11:19:28] 2025-10-05 15:18:16,558 | INFO     | left removable region: 20
[2025-10-05 11:19:28] 2025-10-05 15:18:16,588 | INFO     | sum of square deviations: 724578158311.1622
[2025-10-05 11:19:28] 2025-10-05 15:18:16,676 | INFO     | monitor loop #3666: job 0:6826241954 is in state 'finished'
[2025-10-05 11:19:28] 2025-10-05 15:18:16,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-05 11:19:28] 2025-10-05 15:18:16,796 | INFO     | sum of deviations: -563058568044.8285
[2025-10-05 11:19:28] 2025-10-05 15:18:16,796 | INFO     | mean x: 1759636265.4295404
[2025-10-05 11:19:28] 2025-10-05 15:18:16,796 | INFO     | mean y: 2166154.1996985683
[2025-10-05 11:19:28] 2025-10-05 15:18:16,796 | INFO     | -- intersect: 1369552494.1382368
[2025-10-05 11:19:28] 2025-10-05 15:18:16,796 | INFO     | intersect: 1369552494.1382368
[2025-10-05 11:19:28] 2025-10-05 15:18:16,798 | INFO     | chi2: 0.8360346734899669
[2025-10-05 11:19:28] 2025-10-05 15:18:16,799 | INFO     | -- intersect: 1369552494.1382368
[2025-10-05 11:19:28] 2025-10-05 15:18:16,799 | INFO     | current memory leak: -0.78 B/s (using 1327 data points, chi2=0.84)
[2025-10-05 11:19:28] 2025-10-05 15:18:16,800 | INFO     | could have reported an average CPU frequency of 2774 MHz (48 samples)
[2025-10-05 11:19:28] 2025-10-05 15:18:16,800 | INFO     | ..............................
[2025-10-05 11:19:28] 2025-10-05 15:18:16,801 | INFO     | . Timing measurements:
[2025-10-05 11:19:28] 2025-10-05 15:18:16,801 | INFO     | . get job = 0 s
[2025-10-05 11:19:28] 2025-10-05 15:18:16,801 | INFO     | . initial setup = 5 s
[2025-10-05 11:19:28] 2025-10-05 15:18:16,801 | INFO     | . payload setup = 50 s
[2025-10-05 11:19:28] 2025-10-05 15:18:16,801 | INFO     | . stage-in = 0 s
[2025-10-05 11:19:28] 2025-10-05 15:18:16,801 | INFO     | . payload execution = 82868 s
[2025-10-05 11:19:28] 2025-10-05 15:18:16,801 | INFO     | . stage-out = 11 s
[2025-10-05 11:19:28] 2025-10-05 15:18:16,801 | INFO     | . log creation = 2 s
[2025-10-05 11:19:28] 2025-10-05 15:18:16,802 | INFO     | ..............................
[2025-10-05 11:19:28] 2025-10-05 15:18:16,945 | INFO     | 
[2025-10-05 11:19:28] 2025-10-05 15:18:16,945 | INFO     | job summary report
[2025-10-05 11:19:28] 2025-10-05 15:18:16,945 | INFO     | --------------------------------------------------
[2025-10-05 11:19:28] 2025-10-05 15:18:16,945 | INFO     | PanDA job id: 6826241954
[2025-10-05 11:19:28] 2025-10-05 15:18:16,945 | INFO     | task id: 46373048
[2025-10-05 11:19:28] 2025-10-05 15:18:16,945 | INFO     | errors: (none)
[2025-10-05 11:19:28] 2025-10-05 15:18:16,946 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 11:19:28] 2025-10-05 15:18:16,946 | INFO     | pilot state: finished 
[2025-10-05 11:19:28] 2025-10-05 15:18:16,946 | INFO     | transexitcode: 0
[2025-10-05 11:19:28] 2025-10-05 15:18:16,946 | INFO     | exeerrorcode: 0
[2025-10-05 11:19:28] 2025-10-05 15:18:16,946 | INFO     | exeerrordiag: 
[2025-10-05 11:19:28] 2025-10-05 15:18:16,946 | INFO     | exitcode: 0
[2025-10-05 11:19:28] 2025-10-05 15:18:16,946 | INFO     | exitmsg: OK
[2025-10-05 11:19:28] 2025-10-05 15:18:16,946 | INFO     | cpuconsumptiontime: 72737 s
[2025-10-05 11:19:28] 2025-10-05 15:18:16,946 | INFO     | nevents: 400
[2025-10-05 11:19:28] 2025-10-05 15:18:16,947 | INFO     | neventsw: 0
[2025-10-05 11:19:28] 2025-10-05 15:18:16,947 | INFO     | pid: 2482815
[2025-10-05 11:19:28] 2025-10-05 15:18:16,947 | INFO     | pgrp: 2482815
[2025-10-05 11:19:28] 2025-10-05 15:18:16,947 | INFO     | corecount: 8
[2025-10-05 11:19:28] 2025-10-05 15:18:16,947 | INFO     | event service: False
[2025-10-05 11:19:28] 2025-10-05 15:18:16,947 | INFO     | sizes: {0: 2348013, 1: 2348614, 2: 2348726, 3: 2348897, 4: 2348953, 15: 2348953, 26: 2349109, 37: 2349137, 41: 2349427, 49: 2349455, 82925: 2408681, 82926: 2408960
[2025-10-05 11:19:28] 2025-10-05 15:18:16,947 | INFO     | --------------------------------------------------
[2025-10-05 11:19:28] 2025-10-05 15:18:16,947 | INFO     | 
[2025-10-05 11:19:28] 2025-10-05 15:18:16,947 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-05 11:19:28] 2025-10-05 15:18:16,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,973 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 11:19:28] 2025-10-05 15:18:16,973 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,973 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 11:19:28] 2025-10-05 15:18:16,973 | INFO     | job 6826241954 has completed (purged errors)
[2025-10-05 11:19:28] 2025-10-05 15:18:16,973 | INFO     | overall cleanup function is called
[2025-10-05 11:19:28] 2025-10-05 15:18:17,983 | INFO     | --- collectZombieJob: --- 10, [2482815]
[2025-10-05 11:19:28] 2025-10-05 15:18:17,983 | INFO     | zombie collector waiting for pid 2482815
[2025-10-05 11:19:28] 2025-10-05 15:18:17,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 11:19:28] 2025-10-05 15:18:17,984 | INFO     | collected zombie processes
[2025-10-05 11:19:28] 2025-10-05 15:18:17,984 | INFO     | will attempt to kill all subprocesses of pid=2482815
[2025-10-05 11:19:28] 2025-10-05 15:18:21,264 | INFO     | process IDs to be killed: [2482815] (in reverse order)
[2025-10-05 11:19:28] 2025-10-05 15:18:22,032 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 11:19:28] 2025-10-05 15:18:22,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 11:19:28] 2025-10-05 15:18:22,252 | INFO     | did not find any defunct processes belonging to 2482815
[2025-10-05 11:19:28] 2025-10-05 15:18:22,373 | INFO     | did not find any defunct processes belonging to 2482815
[2025-10-05 11:19:28] 2025-10-05 15:18:22,394 | INFO     | ready for new job
[2025-10-05 11:19:28] 2025-10-05 15:18:22,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 11:19:28] 2025-10-05 15:18:22,421 | INFO     | ***************************************
[2025-10-05 11:19:28] 2025-10-05 15:18:22,421 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 11:19:28] 2025-10-05 15:18:22,439 | INFO     | ***************************************
[2025-10-05 11:19:28] 2025-10-05 15:18:22,439 | INFO     | 
[2025-10-05 11:19:28] 2025-10-05 15:18:22,455 | INFO     | architecture information:
[2025-10-05 11:19:28] 2025-10-05 15:18:22,496 | INFO     | executing command: cat /etc/os-release
[2025-10-05 11:19:28] 2025-10-05 15:18:22,577 | INFO     | cat /etc/os-release:
[2025-10-05 11:19:28] NAME="CentOS Linux"
[2025-10-05 11:19:28] VERSION="7 (Core)"
[2025-10-05 11:19:28] ID="centos"
[2025-10-05 11:19:28] ID_LIKE="rhel fedora"
[2025-10-05 11:19:28] VERSION_ID="7"
[2025-10-05 11:19:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 11:19:28] ANSI_COLOR="0;31"
[2025-10-05 11:19:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 11:19:28] HOME_URL="https://www.centos.org/"
[2025-10-05 11:19:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 11:19:28] 
[2025-10-05 11:19:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 11:19:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 11:19:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 11:19:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 11:19:28] 
[2025-10-05 11:19:28] 2025-10-05 15:18:22,578 | INFO     | ***************************************
[2025-10-05 11:19:28] 2025-10-05 15:18:23,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-05 11:19:28] 2025-10-05 15:18:23,226 | INFO     | sufficient remaining disk space (62887297024 B)
[2025-10-05 11:19:28] 2025-10-05 15:18:23,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 11:19:28] 2025-10-05 15:18:23,226 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 11:19:28] 2025-10-05 15:18:23,226 | INFO     | update_server=False
[2025-10-05 11:19:28] 2025-10-05 15:18:23,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 11:19:28] 2025-10-05 15:18:23,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 11:19:28] 2025-10-05 15:18:23,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 11:19:28] 2025-10-05 15:18:23,227 | INFO     | aborting loop
[2025-10-05 11:19:28] 2025-10-05 15:18:23,834 | INFO     | all data control threads have been joined
[2025-10-05 11:19:28] 2025-10-05 15:18:24,059 | INFO     | all job control threads have been joined
[2025-10-05 11:19:28] 2025-10-05 15:18:24,232 | INFO     | [job] retrieve thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:24,233 | INFO     | [job] job monitor thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:24,269 | INFO     | all payload control threads have been joined
[2025-10-05 11:19:28] 2025-10-05 15:18:24,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:24,856 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:24,857 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:24,860 | INFO     | [data] control thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:24,870 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:24,871 | INFO     | [data] copytool_in thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:24,881 | INFO     | [job] validate thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:25,053 | INFO     | [payload] validate_post thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:25,065 | INFO     | [job] control thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:25,144 | INFO     | [payload] failed_post thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:25,234 | INFO     | [data] copytool_out thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:25,275 | INFO     | [payload] control thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:26,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 11:19:28] 2025-10-05 15:18:26,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 11:19:28] 2025-10-05 15:18:27,020 | INFO     | [job] queue monitor thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:30,308 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 11:19:28] 2025-10-05 15:18:50,272 | INFO     | PID=2465620 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-05 11:19:28] 2025-10-05 15:18:50,288 | INFO     | .. there are 49 such processes running
[2025-10-05 11:19:28] 2025-10-05 15:18:50,289 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 11:19:28] 2025-10-05 15:18:50,290 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 11:19:28] 2025-10-05 15:18:50,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 11:19:28] 2025-10-05 15:19:19,601 | INFO     | [monitor] cgroup control has ended
[2025-10-05 11:19:28] 2025-10-05 15:19:20,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380946016064)>', '<ExcThread(monitor, started 140380301408000)>']
[2025-10-05 11:19:28] 2025-10-05 15:19:20,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 11:19:28] 2025-10-05 15:19:20,497 | INFO     | [monitor] control thread has ended
[2025-10-05 11:19:28] 2025-10-05 15:19:25,245 | INFO     | all workflow threads have been joined
[2025-10-05 11:19:28] 2025-10-05 15:19:25,245 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 11:19:28] 2025-10-05 15:19:25,246 | INFO     | traces error code: 0
[2025-10-05 11:19:28] 2025-10-05 15:19:25,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 11:19:28] 2025-10-05 15:19:27,138 [wrapper] ==== pilot stdout END ====
[2025-10-05 11:19:28] 2025-10-05 15:19:27,170 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 11:19:28] 2025-10-05 15:19:27,214 [wrapper] pilotpid: 2465620
[2025-10-05 11:19:28] 2025-10-05 15:19:27,243 [wrapper] Pilot exit status: 0
[2025-10-05 11:19:28] 2025-10-05 15:19:27,417 [wrapper] pandaids: 6826241954
[2025-10-05 11:19:28] 2025-10-05 15:19:27,584 [wrapper] cleanup supervisor_pilot 2456968 2465622
[2025-10-05 11:19:28] 2025-10-05 15:19:27,616 [wrapper] Test setup, not cleaning
[2025-10-05 11:19:28] 2025-10-05 15:19:27,666 [wrapper] apfmon messages muted
[2025-10-05 11:19:28] 2025-10-05 15:19:27,674 [wrapper] ==== wrapper stdout END ====
[2025-10-05 11:19:28] 2025-10-05 15:19:27,712 [wrapper] ==== wrapper stderr END ====
[2025-10-05 11:19:28]  *** Error codes and diagnostics ***
[2025-10-05 11:19:28]     "exeErrorCode": 0,
[2025-10-05 11:19:28]     "exeErrorDiag": "",
[2025-10-05 11:19:28]     "pilotErrorCode": 0,
[2025-10-05 11:19:28]     "pilotErrorDiag": "",
[2025-10-05 11:19:28]  *** Listing of results directory ***
[2025-10-05 11:19:28] total 645516
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas    552446 Sep 30 20:15 pilot3.tar.gz
[2025-10-05 11:19:28] -rwx------. 1 boincer umatlas     36292 Sep 30 20:38 runpilot2-wrapper.sh
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas      5112 Sep 30 20:38 queuedata.json
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas       100 Oct  1 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 11:19:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  1 12:22 run_atlas
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas       105 Oct  1 12:22 job.xml
[2025-10-05 11:19:28] -rw-r--r--. 3 boincer umatlas 221000285 Oct  1 12:22 EVNT.46373045._002440.pool.root.1
[2025-10-05 11:19:28] -rw-r--r--. 3 boincer umatlas 221000285 Oct  1 12:22 ATLAS.root_0
[2025-10-05 11:19:28] -rw-r--r--. 2 boincer umatlas     15120 Oct  1 12:22 start_atlas.sh
[2025-10-05 11:19:28] drwxrwx--x. 2 boincer umatlas      4096 Oct  1 12:22 shared
[2025-10-05 11:19:28] -rw-r--r--. 2 boincer umatlas    565602 Oct  1 12:22 input.tar.gz
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas         0 Oct  1 12:22 boinc_lockfile
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas      2538 Oct  4 12:12 pandaJob.out
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas    975886 Oct  4 12:13 agis_schedconf.cvmfs.json
[2025-10-05 11:19:28] drwx------. 4 boincer umatlas      4096 Oct  4 12:13 pilot3
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas      6614 Oct  5 11:11 init_data.xml
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas 195795030 Oct  5 11:12 HITS.46373048._073734.pool.root.1
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas       532 Oct  5 11:12 boinc_task_state.xml
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas      1055 Oct  5 11:17 memory_monitor_summary.json
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas   1560401 Oct  5 11:17 agis_ddmendpoints.agis.ALL.json
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas   1198464 Oct  5 11:17 log.46373048._073734.job.log.tgz.1
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas      7859 Oct  5 11:18 heartbeat.json
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas        95 Oct  5 11:18 pilot_heartbeat.json
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas      8192 Oct  5 11:19 boinc_mmap_file
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas        29 Oct  5 11:19 wrapper_checkpoint.txt
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas      4824 Oct  5 11:19 pilotlog.txt
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas   8455369 Oct  5 11:19 log.46373048._073734.job.log.1
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas       357 Oct  5 11:19 output.list
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas       620 Oct  5 11:19 runtime_log
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas   9676800 Oct  5 11:19 result.tar.gz
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas      8784 Oct  5 11:19 runtime_log.err
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas       787 Oct  5 11:19 kweMDmx2zN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZUANDmiASyEn.diag
[2025-10-05 11:19:28] -rw-r--r--. 1 boincer umatlas     23310 Oct  5 11:19 stderr.txt
[2025-10-05 11:19:28] HITS file was successfully produced:
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas 195795030 Oct  5 11:12 shared/HITS.pool.root.1
[2025-10-05 11:19:28]  *** Contents of shared directory: ***
[2025-10-05 11:19:28] total 417064
[2025-10-05 11:19:28] -rw-r--r--. 3 boincer umatlas 221000285 Oct  1 12:22 ATLAS.root_0
[2025-10-05 11:19:28] -rw-r--r--. 2 boincer umatlas     15120 Oct  1 12:22 start_atlas.sh
[2025-10-05 11:19:28] -rw-r--r--. 2 boincer umatlas    565602 Oct  1 12:22 input.tar.gz
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas 195795030 Oct  5 11:12 HITS.pool.root.1
[2025-10-05 11:19:28] -rw-------. 1 boincer umatlas   9676800 Oct  5 11:19 result.tar.gz
11:19:29 (2456782): run_atlas exited; CPU time 76743.225149
11:19:29 (2456782): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN