Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:09:30 (3563808): wrapper (7.7.26015): starting
05:09:30 (3563808): wrapper: running run_atlas (--nthreads 12)
[2025-10-01 05:09:30] Arguments: --nthreads 12
[2025-10-01 05:09:30] Threads: 12
[2025-10-01 05:09:30] Checking for CVMFS
[2025-10-01 05:09:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-01 05:09:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-01 05:09:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-01 05:09:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-01 05:09:31] 2.11.5.0 2829 15596 216292 151213 0 617 26044649 45568001 10287 130560 0 113247674 99.798 62973483 23461 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-01 05:09:31] CVMFS is ok
[2025-10-01 05:09:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-01 05:09:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-01 05:09:31] Further information can be found at the LHC@home message board.
[2025-10-01 05:09:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-01 05:09:31] Checking for apptainer binary...
[2025-10-01 05:09:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-01 05:09:31] Running /usr/bin/apptainer --version
[2025-10-01 05:09:31] apptainer version 1.4.1-1.el9
[2025-10-01 05:09:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-01 05:09:31] wns0092.triumf.lcg
[2025-10-01 05:09:31] apptainer works
[2025-10-01 05:09:31] Set ATHENA_PROC_NUMBER=12
[2025-10-01 05:09:31] Set ATHENA_CORE_NUMBER=12
[2025-10-01 05:09:31] Starting ATLAS job with PandaID=6826361680
[2025-10-01 05:09:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-01 05:14:04]  *** The last 200 lines of the pilot log: ***
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | WARNING  | wrong length of table data, x=[1759320649.0], y=[1195.0] (must be same and length>=4)
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | ..............................
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . Timing measurements:
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . get job = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . initial setup = 3 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . payload setup = 17 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . stage-in = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . payload execution = 34 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | . stage-out = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | . log creation = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | ..............................
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6826361680/pilotlog.txt
[2025-10-01 05:14:04] 2025-10-01 12:13:30,603 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-01 05:14:04] - Log from pilotlog.txt -
[2025-10-01 05:14:04] 2025-10-01 12:13:30,589 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6826361680/memory_monitor_summary.json (trf name=prmon)
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | INFO     | extracted standard info from prmon json
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | INFO     | extracted standard memory fields from prmon json
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | WARNING  | wrong length of table data, x=[1759320649.0], y=[1195.0] (must be same and length>=4)
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | ..............................
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . Timing measurements:
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . get job = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . initial setup = 3 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . payload setup = 17 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . stage-in = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . payload execution = 34 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | . stage-out = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | . log creation = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | ..............................
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6826361680/pilotlog.txt
[2025-10-01 05:14:04] 2025-10-01 12:13:30,603 | WARNING  | 
[2025-10-01 05:14:04] [begin log extracts]
[2025-10-01 05:14:04] - Log from pilotlog.txt -
[2025-10-01 05:14:04] 2025-10-01 12:13:30,589 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6826361680/memory_monitor_summary.json (trf name=prmon)
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | INFO     | extracted standard info from prmon json
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | INFO     | extracted standard memory fields from prmon json
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-01 05:14:04] 2025-10-01 12:13:30,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | WARNING  | wrong length of table data, x=[1759320649.0], y=[1195.0] (must be same and length>=4)
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | ..............................
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . Timing measurements:
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . get job = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . initial setup = 3 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . payload setup = 17 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . stage-in = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,591 | INFO     | . payload execution = 34 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | . stage-out = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | . log creation = 0 s
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | ..............................
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-01 05:14:04] 2025-10-01 12:13:30,592 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6826361680/pilotlog.txt
[2025-10-01 05:14:04] [end log extracts]
[2025-10-01 05:14:04] 2025-10-01 12:13:30,604 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-01 05:14:04] 2025-10-01 12:13:30,604 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-01 05:14:04] 2025-10-01 12:13:30,918 | INFO     | time since job start (221s) is within the limit (172800.0s)
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | 
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | job summary report
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | --------------------------------------------------
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | PanDA job id: 6826361680
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | task id: 46373048
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-01 05:11:05,220 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | pilot state: failed 
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | transexitcode: 65
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | exeerrorcode: 65
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | exitcode: 65
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | cpuconsumptiontime: 16 s
[2025-10-01 05:14:04] 2025-10-01 12:13:31,135 | INFO     | nevents: 0
[2025-10-01 05:14:04] 2025-10-01 12:13:31,136 | INFO     | neventsw: 0
[2025-10-01 05:14:04] 2025-10-01 12:13:31,136 | INFO     | pid: 3574347
[2025-10-01 05:14:04] 2025-10-01 12:13:31,136 | INFO     | pgrp: 3574347
[2025-10-01 05:14:04] 2025-10-01 12:13:31,136 | INFO     | corecount: 12
[2025-10-01 05:14:04] 2025-10-01 12:13:31,136 | INFO     | event service: False
[2025-10-01 05:14:04] 2025-10-01 12:13:31,136 | INFO     | sizes: {0: 2348013, 1: 2348695, 2: 2348894, 13: 2348894, 15: 2349212, 24: 2349240, 56: 2372684, 57: 2376976, 59: 2377004, 189: 2377170}
[2025-10-01 05:14:04] 2025-10-01 12:13:31,136 | INFO     | --------------------------------------------------
[2025-10-01 05:14:04] 2025-10-01 12:13:31,136 | INFO     | 
[2025-10-01 05:14:04] 2025-10-01 12:13:31,136 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-01 05:14:04] 2025-10-01 12:13:31,213 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,213 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,213 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-01 05:14:04] 2025-10-01 12:13:31,214 | INFO     | job 6826361680 has completed (purged errors)
[2025-10-01 05:14:04] 2025-10-01 12:13:31,215 | INFO     | overall cleanup function is called
[2025-10-01 05:14:04] 2025-10-01 12:13:32,223 | INFO     | --- collectZombieJob: --- 10, [3574347]
[2025-10-01 05:14:04] 2025-10-01 12:13:32,223 | INFO     | zombie collector waiting for pid 3574347
[2025-10-01 05:14:04] 2025-10-01 12:13:32,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-01 05:14:04] 2025-10-01 12:13:32,223 | INFO     | collected zombie processes
[2025-10-01 05:14:04] 2025-10-01 12:13:32,223 | INFO     | will attempt to kill all subprocesses of pid=3574347
[2025-10-01 05:14:04] 2025-10-01 12:13:32,521 | INFO     | process IDs to be killed: [3574347] (in reverse order)
[2025-10-01 05:14:04] 2025-10-01 12:13:32,824 | WARNING  | found no corresponding commands to process id(s)
[2025-10-01 05:14:04] 2025-10-01 12:13:32,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-01 05:14:04] 2025-10-01 12:13:32,860 | INFO     | did not find any defunct processes belonging to 3574347
[2025-10-01 05:14:04] 2025-10-01 12:13:32,909 | INFO     | did not find any defunct processes belonging to 3574347
[2025-10-01 05:14:04] 2025-10-01 12:13:32,910 | INFO     | ready for new job
[2025-10-01 05:14:04] 2025-10-01 12:13:32,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-01 05:14:04] 2025-10-01 12:13:32,911 | INFO     | ***************************************
[2025-10-01 05:14:04] 2025-10-01 12:13:32,911 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-01 05:14:04] 2025-10-01 12:13:32,911 | INFO     | ***************************************
[2025-10-01 05:14:04] 2025-10-01 12:13:32,911 | INFO     | 
[2025-10-01 05:14:04] 2025-10-01 12:13:32,950 | INFO     | architecture information:
[2025-10-01 05:14:04] 2025-10-01 12:13:32,951 | INFO     | executing command: cat /etc/os-release
[2025-10-01 05:14:04] 2025-10-01 12:13:33,113 | INFO     | cat /etc/os-release:
[2025-10-01 05:14:04] NAME="CentOS Linux"
[2025-10-01 05:14:04] VERSION="7 (Core)"
[2025-10-01 05:14:04] ID="centos"
[2025-10-01 05:14:04] ID_LIKE="rhel fedora"
[2025-10-01 05:14:04] VERSION_ID="7"
[2025-10-01 05:14:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-01 05:14:04] ANSI_COLOR="0;31"
[2025-10-01 05:14:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-01 05:14:04] HOME_URL="https://www.centos.org/"
[2025-10-01 05:14:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-01 05:14:04] 
[2025-10-01 05:14:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-01 05:14:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-01 05:14:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-01 05:14:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-01 05:14:04] 
[2025-10-01 05:14:04] 2025-10-01 12:13:33,114 | INFO     | ***************************************
[2025-10-01 05:14:04] 2025-10-01 12:13:33,631 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-01 05:14:04] 2025-10-01 12:13:33,784 | INFO     | sufficient remaining disk space (1930220797952 B)
[2025-10-01 05:14:04] 2025-10-01 12:13:33,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-01 05:14:04] 2025-10-01 12:13:33,784 | INFO     | current server update state: UPDATING_FINAL
[2025-10-01 05:14:04] 2025-10-01 12:13:33,785 | INFO     | update_server=False
[2025-10-01 05:14:04] 2025-10-01 12:13:33,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-01 05:14:04] 2025-10-01 12:13:33,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-01 05:14:04] 2025-10-01 12:13:33,785 | INFO     | aborting loop
[2025-10-01 05:14:04] 2025-10-01 12:13:33,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-01 05:14:04] 2025-10-01 12:13:34,084 | INFO     | all job control threads have been joined
[2025-10-01 05:14:04] 2025-10-01 12:13:34,185 | INFO     | all data control threads have been joined
[2025-10-01 05:14:04] 2025-10-01 12:13:34,712 | INFO     | all payload control threads have been joined
[2025-10-01 05:14:04] 2025-10-01 12:13:34,790 | INFO     | [job] job monitor thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:34,791 | INFO     | [job] retrieve thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:34,985 | INFO     | [payload] validate_pre thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:35,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-01 05:14:04] 2025-10-01 12:13:35,091 | INFO     | [job] control thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:35,147 | INFO     | [payload] validate_post thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:35,191 | INFO     | [data] control thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:35,487 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:35,564 | INFO     | [job] validate thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:35,703 | INFO     | [job] create_data_payload thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:35,719 | INFO     | [payload] control thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:35,872 | INFO     | [data] copytool_in thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:35,930 | INFO     | [payload] execute_payloads thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:35,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-01 05:14:04] 2025-10-01 12:13:36,085 | INFO     | [payload] failed_post thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:36,965 | INFO     | [job] queue monitor thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:37,085 | INFO     | [data] copytool_out thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:37,798 | INFO     | [data] queue_monitor thread has finished
[2025-10-01 05:14:04] 2025-10-01 12:13:48,911 | INFO     | [monitor] cgroup control has ended
[2025-10-01 05:14:04] 2025-10-01 12:13:50,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624952768320)>', '<ExcThread(monitor, started 140624124696320)>']
[2025-10-01 05:14:04] 2025-10-01 12:13:55,276 | INFO     | all workflow threads have been joined
[2025-10-01 05:14:04] 2025-10-01 12:13:55,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-01 05:14:04] 2025-10-01 12:13:55,276 | INFO     | traces error code: 0
[2025-10-01 05:14:04] 2025-10-01 12:13:55,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-01 05:14:04] 2025-10-01 12:14:04,254 | INFO     | PID=3567494 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-01 05:14:04] 2025-10-01 12:14:04,255 | INFO     | .. there are 21 such processes running
[2025-10-01 05:14:04] 2025-10-01 12:14:04,256 | INFO     | found 0 job(s) in 20 queues
[2025-10-01 05:14:04] 2025-10-01 12:14:04,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-01 05:14:04] 2025-10-01 12:14:04,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-01 05:14:04] 2025-10-01 12:14:04,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-01 05:14:04] 2025-10-01 12:14:04,257 | INFO     | [monitor] control thread has ended
[2025-10-01 05:14:04] 2025-10-01 12:14:04,375 [wrapper] ==== pilot stdout END ====
[2025-10-01 05:14:04] 2025-10-01 12:14:04,381 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-01 05:14:04] 2025-10-01 12:14:04,388 [wrapper] pilotpid: 3567494
[2025-10-01 05:14:04] 2025-10-01 12:14:04,396 [wrapper] Pilot exit status: 0
[2025-10-01 05:14:04] 2025-10-01 12:14:04,436 [wrapper] pandaids: 6826361680
[2025-10-01 05:14:04] 2025-10-01 12:14:04,473 [wrapper] cleanup supervisor_pilot 3567500 3567495
[2025-10-01 05:14:04] 2025-10-01 12:14:04,475 [wrapper] Test setup, not cleaning
[2025-10-01 05:14:04] 2025-10-01 12:14:04,477 [wrapper] apfmon messages muted
[2025-10-01 05:14:04] 2025-10-01 12:14:04,479 [wrapper] ==== wrapper stdout END ====
[2025-10-01 05:14:04] 2025-10-01 12:14:04,480 [wrapper] ==== wrapper stderr END ====
[2025-10-01 05:14:04]  *** Error codes and diagnostics ***
[2025-10-01 05:14:04]     "exeErrorCode": 65,
[2025-10-01 05:14:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-01 05:14:04]     "pilotErrorCode": 1305,
[2025-10-01 05:14:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-01 05:14:04]  *** Listing of results directory ***
[2025-10-01 05:14:04] total 218764
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc    552446 Oct  1 01:40 pilot3.tar.gz
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc      5112 Oct  1 01:53 queuedata.json
[2025-10-01 05:14:04] -rwx------. 1 boinc boinc     36292 Oct  1 01:55 runpilot2-wrapper.sh
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc       100 Oct  1 05:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-01 05:14:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct  1 05:09 run_atlas
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc       105 Oct  1 05:09 job.xml
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc      6594 Oct  1 05:09 init_data.xml
[2025-10-01 05:14:04] -rw-r--r--. 2 boinc boinc 219905112 Oct  1 05:09 EVNT.46373045._002682.pool.root.1
[2025-10-01 05:14:04] -rw-r--r--. 2 boinc boinc     15120 Oct  1 05:09 start_atlas.sh
[2025-10-01 05:14:04] drwxrwx--x. 2 boinc boinc      4096 Oct  1 05:09 shared
[2025-10-01 05:14:04] -rw-r--r--. 2 boinc boinc    565603 Oct  1 05:09 input.tar.gz
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc         0 Oct  1 05:09 boinc_lockfile
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc      2538 Oct  1 05:09 pandaJob.out
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc    979847 Oct  1 05:09 agis_schedconf.cvmfs.json
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc   1560296 Oct  1 05:09 agis_ddmendpoints.agis.ALL.json
[2025-10-01 05:14:04] drwx------. 4 boinc boinc      4096 Oct  1 05:09 pilot3
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc       522 Oct  1 05:11 boinc_task_state.xml
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc       989 Oct  1 05:11 memory_monitor_summary.json
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc     21490 Oct  1 05:11 log.46373048._079825.job.log.tgz.1
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc      8436 Oct  1 05:13 heartbeat.json
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc        22 Oct  1 05:14 wrapper_checkpoint.txt
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc      8192 Oct  1 05:14 boinc_mmap_file
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc        95 Oct  1 05:14 pilot_heartbeat.json
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc       823 Oct  1 05:14 pilotlog.txt
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc     89285 Oct  1 05:14 log.46373048._079825.job.log.1
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc       188 Oct  1 05:14 output.list
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc       620 Oct  1 05:14 runtime_log
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc    133120 Oct  1 05:14 result.tar.gz
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc      8528 Oct  1 05:14 runtime_log.err
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc       644 Oct  1 05:14 kAHLDmIn7N8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnbBNDmIZfOBn.diag
[2025-10-01 05:14:04] -rw-r--r--. 1 boinc boinc     21834 Oct  1 05:14 stderr.txt
[2025-10-01 05:14:04] No HITS result produced
[2025-10-01 05:14:04]  *** Contents of shared directory: ***
[2025-10-01 05:14:04] total 215456
[2025-10-01 05:14:04] -rw-r--r--. 2 boinc boinc 219905112 Oct  1 05:09 ATLAS.root_0
[2025-10-01 05:14:04] -rw-r--r--. 2 boinc boinc     15120 Oct  1 05:09 start_atlas.sh
[2025-10-01 05:14:04] -rw-r--r--. 2 boinc boinc    565603 Oct  1 05:09 input.tar.gz
[2025-10-01 05:14:04] -rw-------. 1 boinc boinc    133120 Oct  1 05:14 result.tar.gz
05:14:06 (3563808): run_atlas exited; CPU time 23.887835
05:14:06 (3563808): called boinc_finish(0)

</stderr_txt>
]]>

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