Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:50:27 (2316818): wrapper (7.7.26015): starting
23:50:27 (2316818): wrapper: running run_atlas (--nthreads 12)
[2025-09-30 23:50:27] Arguments: --nthreads 12
[2025-09-30 23:50:27] Threads: 12
[2025-09-30 23:50:27] Checking for CVMFS
[2025-09-30 23:50:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-09-30 23:50:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-09-30 23:50:27] Running cvmfs_config stat atlas.cern.ch
[2025-09-30 23:50:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-09-30 23:50:27] 2.11.5.0 2572 15279 140348 151205 2 381 38735411 45568000 8960 130560 0 105831670 99.776 65271540 22203 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-09-30 23:50:27] CVMFS is ok
[2025-09-30 23:50:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-09-30 23:50:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-09-30 23:50:27] Further information can be found at the LHC@home message board.
[2025-09-30 23:50:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-09-30 23:50:27] Checking for apptainer binary...
[2025-09-30 23:50:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-09-30 23:50:27] Running /usr/bin/apptainer --version
[2025-09-30 23:50:28] apptainer version 1.4.1-1.el9
[2025-09-30 23:50:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-09-30 23:50:28] wns0095.triumf.lcg
[2025-09-30 23:50:28] apptainer works
[2025-09-30 23:50:28] Set ATHENA_PROC_NUMBER=12
[2025-09-30 23:50:28] Set ATHENA_CORE_NUMBER=12
[2025-09-30 23:50:28] Starting ATLAS job with PandaID=6826325768
[2025-09-30 23:50:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-09-30 23:54:54]  *** The last 200 lines of the pilot log: ***
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | INFO     | will not add max space = 0 B to job metrics
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | WARNING  | wrong length of table data, x=[1759301487.0], y=[1635.0] (must be same and length>=4)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | INFO     | could have reported an average CPU frequency of 2722 MHz (4 samples)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | ..............................
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . Timing measurements:
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . get job = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . initial setup = 3 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . payload setup = 10 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . stage-in = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . payload execution = 36 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . stage-out = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . log creation = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | ..............................
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6826325768/pilotlog.txt
[2025-09-30 23:54:54] 2025-10-01 06:54:01,333 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-09-30 23:54:54] - Log from pilotlog.txt -
[2025-09-30 23:54:54] 2025-10-01 06:54:01,305 | INFO     | extracted standard memory fields from prmon json
[2025-09-30 23:54:54] 2025-10-01 06:54:01,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-09-30 23:54:54] 2025-10-01 06:54:01,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-09-30 23:54:54] 2025-10-01 06:54:01,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | WARNING  | found no stored workdir sizes
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | INFO     | will not add max space = 0 B to job metrics
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | WARNING  | wrong length of table data, x=[1759301487.0], y=[1635.0] (must be same and length>=4)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | INFO     | could have reported an average CPU frequency of 2722 MHz (4 samples)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | ..............................
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . Timing measurements:
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . get job = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . initial setup = 3 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . payload setup = 10 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . stage-in = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . payload execution = 36 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . stage-out = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . log creation = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | ..............................
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6826325768/pilotlog.txt
[2025-09-30 23:54:54] 2025-10-01 06:54:01,333 | WARNING  | 
[2025-09-30 23:54:54] [begin log extracts]
[2025-09-30 23:54:54] - Log from pilotlog.txt -
[2025-09-30 23:54:54] 2025-10-01 06:54:01,305 | INFO     | extracted standard memory fields from prmon json
[2025-09-30 23:54:54] 2025-10-01 06:54:01,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-09-30 23:54:54] 2025-10-01 06:54:01,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-09-30 23:54:54] 2025-10-01 06:54:01,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | WARNING  | found no stored workdir sizes
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | INFO     | will not add max space = 0 B to job metrics
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | WARNING  | wrong length of table data, x=[1759301487.0], y=[1635.0] (must be same and length>=4)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,306 | INFO     | could have reported an average CPU frequency of 2722 MHz (4 samples)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | ..............................
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . Timing measurements:
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . get job = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . initial setup = 3 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . payload setup = 10 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . stage-in = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . payload execution = 36 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . stage-out = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | . log creation = 0 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | ..............................
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-09-30 23:54:54] 2025-10-01 06:54:01,307 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6826325768/pilotlog.txt
[2025-09-30 23:54:54] [end log extracts]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,333 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,334 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-09-30 23:54:54] 2025-10-01 06:54:01,465 | INFO     | 
[2025-09-30 23:54:54] 2025-10-01 06:54:01,465 | INFO     | job summary report
[2025-09-30 23:54:54] 2025-10-01 06:54:01,465 | INFO     | --------------------------------------------------
[2025-09-30 23:54:54] 2025-10-01 06:54:01,465 | INFO     | PanDA job id: 6826325768
[2025-09-30 23:54:54] 2025-10-01 06:54:01,465 | INFO     | task id: 46373048
[2025-09-30 23:54:54] 2025-10-01 06:54:01,465 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-09-30 23:51:47,170 CRITICAL Transform executor raised TransformValidationExceptio
[2025-09-30 23:54:54] 2025-10-01 06:54:01,465 | INFO     | status: LOG_TRANSFER = DONE 
[2025-09-30 23:54:54] 2025-10-01 06:54:01,465 | INFO     | pilot state: failed 
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | transexitcode: 65
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | exeerrorcode: 65
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | exitcode: 65
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | cpuconsumptiontime: 18 s
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | nevents: 0
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | neventsw: 0
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | pid: 2327381
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | pgrp: 2327381
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | corecount: 12
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | event service: False
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | sizes: {0: 2348605, 1: 2348860, 8: 2349122, 11: 2349150, 50: 2372619, 51: 2377067, 175: 2377205}
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | --------------------------------------------------
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | 
[2025-09-30 23:54:54] 2025-10-01 06:54:01,466 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-09-30 23:54:54] 2025-10-01 06:54:01,482 | INFO     | queue jobs had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue payloads had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue data_in had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue data_out had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,484 | INFO     | queue completed_jobids has 1 job(s)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,484 | INFO     | queue messages had 0 job(s) [purged]
[2025-09-30 23:54:54] 2025-10-01 06:54:01,484 | INFO     | job 6826325768 has completed (purged errors)
[2025-09-30 23:54:54] 2025-10-01 06:54:01,484 | INFO     | overall cleanup function is called
[2025-09-30 23:54:54] 2025-10-01 06:54:02,491 | INFO     | --- collectZombieJob: --- 10, [2327381]
[2025-09-30 23:54:54] 2025-10-01 06:54:02,491 | INFO     | zombie collector waiting for pid 2327381
[2025-09-30 23:54:54] 2025-10-01 06:54:02,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-09-30 23:54:54] 2025-10-01 06:54:02,491 | INFO     | collected zombie processes
[2025-09-30 23:54:54] 2025-10-01 06:54:02,491 | INFO     | will attempt to kill all subprocesses of pid=2327381
[2025-09-30 23:54:54] 2025-10-01 06:54:02,643 | INFO     | process IDs to be killed: [2327381] (in reverse order)
[2025-09-30 23:54:54] 2025-10-01 06:54:02,703 | WARNING  | found no corresponding commands to process id(s)
[2025-09-30 23:54:54] 2025-10-01 06:54:02,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-09-30 23:54:54] 2025-10-01 06:54:02,710 | INFO     | did not find any defunct processes belonging to 2327381
[2025-09-30 23:54:54] 2025-10-01 06:54:02,716 | INFO     | did not find any defunct processes belonging to 2327381
[2025-09-30 23:54:54] 2025-10-01 06:54:02,716 | INFO     | ready for new job
[2025-09-30 23:54:54] 2025-10-01 06:54:02,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-09-30 23:54:54] 2025-10-01 06:54:02,718 | INFO     | ***************************************
[2025-09-30 23:54:54] 2025-10-01 06:54:02,718 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-09-30 23:54:54] 2025-10-01 06:54:02,718 | INFO     | ***************************************
[2025-09-30 23:54:54] 2025-10-01 06:54:02,719 | INFO     | 
[2025-09-30 23:54:54] 2025-10-01 06:54:02,720 | INFO     | architecture information:
[2025-09-30 23:54:54] 2025-10-01 06:54:02,721 | INFO     | executing command: cat /etc/os-release
[2025-09-30 23:54:54] 2025-10-01 06:54:02,735 | INFO     | cat /etc/os-release:
[2025-09-30 23:54:54] NAME="CentOS Linux"
[2025-09-30 23:54:54] VERSION="7 (Core)"
[2025-09-30 23:54:54] ID="centos"
[2025-09-30 23:54:54] ID_LIKE="rhel fedora"
[2025-09-30 23:54:54] VERSION_ID="7"
[2025-09-30 23:54:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-09-30 23:54:54] ANSI_COLOR="0;31"
[2025-09-30 23:54:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-09-30 23:54:54] HOME_URL="https://www.centos.org/"
[2025-09-30 23:54:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-09-30 23:54:54] 
[2025-09-30 23:54:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-09-30 23:54:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-09-30 23:54:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-09-30 23:54:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-09-30 23:54:54] 
[2025-09-30 23:54:54] 2025-10-01 06:54:02,735 | INFO     | ***************************************
[2025-09-30 23:54:54] 2025-10-01 06:54:03,238 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-09-30 23:54:54] 2025-10-01 06:54:03,251 | INFO     | sufficient remaining disk space (1885008297984 B)
[2025-09-30 23:54:54] 2025-10-01 06:54:03,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-09-30 23:54:54] 2025-10-01 06:54:03,252 | INFO     | current server update state: UPDATING_FINAL
[2025-09-30 23:54:54] 2025-10-01 06:54:03,252 | INFO     | update_server=False
[2025-09-30 23:54:54] 2025-10-01 06:54:03,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-09-30 23:54:54] 2025-10-01 06:54:03,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-09-30 23:54:54] 2025-10-01 06:54:03,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-09-30 23:54:54] 2025-10-01 06:54:03,418 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-09-30 23:54:54] 2025-10-01 06:54:03,418 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-09-30 23:54:54] 2025-10-01 06:54:03,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-09-30 23:54:54] 2025-10-01 06:54:03,418 | INFO     | will abort loop
[2025-09-30 23:54:54] 2025-10-01 06:54:03,613 | INFO     | all data control threads have been joined
[2025-09-30 23:54:54] 2025-10-01 06:54:04,064 | INFO     | all payload control threads have been joined
[2025-09-30 23:54:54] 2025-10-01 06:54:04,258 | INFO     | [job] retrieve thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:04,258 | INFO     | [job] queue monitor thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:04,277 | INFO     | [job] create_data_payload thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:04,345 | INFO     | [payload] failed_post thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:04,408 | INFO     | [payload] validate_pre thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:04,424 | INFO     | [job] job monitor thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:04,462 | INFO     | [payload] run_realtimelog thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:04,619 | INFO     | [data] control thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:04,797 | INFO     | all job control threads have been joined
[2025-09-30 23:54:54] 2025-10-01 06:54:04,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-09-30 23:54:54] 2025-10-01 06:54:04,878 | INFO     | [payload] execute_payloads thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:05,069 | INFO     | [payload] control thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:05,260 | INFO     | [data] copytool_out thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:05,274 | INFO     | [data] copytool_in thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:05,289 | INFO     | [payload] validate_post thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:05,575 | INFO     | [job] validate thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:05,802 | INFO     | [job] control thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:08,829 | INFO     | [data] queue_monitor thread has finished
[2025-09-30 23:54:54] 2025-10-01 06:54:33,529 | INFO     | PID=2320534 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-09-30 23:54:54] 2025-10-01 06:54:33,530 | INFO     | .. there are 21 such processes running
[2025-09-30 23:54:54] 2025-10-01 06:54:33,531 | INFO     | found 0 job(s) in 20 queues
[2025-09-30 23:54:54] 2025-10-01 06:54:33,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-09-30 23:54:54] 2025-10-01 06:54:33,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-09-30 23:54:54] 2025-10-01 06:54:47,114 | INFO     | [monitor] cgroup control has ended
[2025-09-30 23:54:54] 2025-10-01 06:54:48,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444305418048)>', '<ExcThread(monitor, started 140443509565184)>']
[2025-09-30 23:54:54] 2025-10-01 06:54:49,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-09-30 23:54:54] 2025-10-01 06:54:49,633 | INFO     | [monitor] control thread has ended
[2025-09-30 23:54:54] 2025-10-01 06:54:53,996 | INFO     | all workflow threads have been joined
[2025-09-30 23:54:54] 2025-10-01 06:54:53,996 | INFO     | end of generic workflow (traces error code: 0)
[2025-09-30 23:54:54] 2025-10-01 06:54:53,996 | INFO     | traces error code: 0
[2025-09-30 23:54:54] 2025-10-01 06:54:53,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-09-30 23:54:54] 2025-10-01 06:54:54,109 [wrapper] ==== pilot stdout END ====
[2025-09-30 23:54:54] 2025-10-01 06:54:54,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-09-30 23:54:54] 2025-10-01 06:54:54,114 [wrapper] pilotpid: 2320534
[2025-09-30 23:54:54] 2025-10-01 06:54:54,115 [wrapper] Pilot exit status: 0
[2025-09-30 23:54:54] 2025-10-01 06:54:54,131 [wrapper] pandaids: 6826325768
[2025-09-30 23:54:54] 2025-10-01 06:54:54,177 [wrapper] cleanup supervisor_pilot 2320540 2320535
[2025-09-30 23:54:54] 2025-10-01 06:54:54,183 [wrapper] Test setup, not cleaning
[2025-09-30 23:54:54] 2025-10-01 06:54:54,186 [wrapper] apfmon messages muted
[2025-09-30 23:54:54] 2025-10-01 06:54:54,191 [wrapper] ==== wrapper stdout END ====
[2025-09-30 23:54:54] 2025-10-01 06:54:54,209 [wrapper] ==== wrapper stderr END ====
[2025-09-30 23:54:54]  *** Error codes and diagnostics ***
[2025-09-30 23:54:54]     "exeErrorCode": 65,
[2025-09-30 23:54:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-09-30 23:54:54]     "pilotErrorCode": 1305,
[2025-09-30 23:54:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-09-30 23:54:54]  *** Listing of results directory ***
[2025-09-30 23:54:54] total 218804
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc    552446 Sep 30 20:43 pilot3.tar.gz
[2025-09-30 23:54:54] -rwx------. 1 boinc boinc     36292 Sep 30 21:10 runpilot2-wrapper.sh
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc      5112 Sep 30 21:10 queuedata.json
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc       100 Sep 30 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-09-30 23:54:54] -rwxr-xr-x. 1 boinc boinc      7986 Sep 30 23:50 run_atlas
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc       105 Sep 30 23:50 job.xml
[2025-09-30 23:54:54] -rw-r--r--. 2 boinc boinc 219946612 Sep 30 23:50 EVNT.46373045._002563.pool.root.1
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc      6594 Sep 30 23:50 init_data.xml
[2025-09-30 23:54:54] -rw-r--r--. 2 boinc boinc     15120 Sep 30 23:50 start_atlas.sh
[2025-09-30 23:54:54] drwxrwx--x. 2 boinc boinc      4096 Sep 30 23:50 shared
[2025-09-30 23:54:54] -rw-r--r--. 2 boinc boinc    565603 Sep 30 23:50 input.tar.gz
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc         0 Sep 30 23:50 boinc_lockfile
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc      2535 Sep 30 23:50 pandaJob.out
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc    978717 Sep 30 23:50 agis_schedconf.cvmfs.json
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc   1560051 Sep 30 23:50 agis_ddmendpoints.agis.ALL.json
[2025-09-30 23:54:54] drwx------. 4 boinc boinc      4096 Sep 30 23:50 pilot3
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc       522 Sep 30 23:51 boinc_task_state.xml
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc       979 Sep 30 23:51 memory_monitor_summary.json
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc     21823 Sep 30 23:51 log.46373048._076807.job.log.tgz.1
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc        95 Sep 30 23:53 pilot_heartbeat.json
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc      8410 Sep 30 23:54 heartbeat.json
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc      8192 Sep 30 23:54 boinc_mmap_file
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc        22 Sep 30 23:54 wrapper_checkpoint.txt
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc      5009 Sep 30 23:54 pilotlog.txt
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc     86768 Sep 30 23:54 log.46373048._076807.job.log.1
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc       188 Sep 30 23:54 output.list
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc       620 Sep 30 23:54 runtime_log
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc    133120 Sep 30 23:54 result.tar.gz
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc       647 Sep 30 23:54 ZEgLDmtL3N8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlL7LDmojFcan.diag
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc      8528 Sep 30 23:54 runtime_log.err
[2025-09-30 23:54:54] -rw-r--r--. 1 boinc boinc     21674 Sep 30 23:54 stderr.txt
[2025-09-30 23:54:54] No HITS result produced
[2025-09-30 23:54:54]  *** Contents of shared directory: ***
[2025-09-30 23:54:54] total 215496
[2025-09-30 23:54:54] -rw-r--r--. 2 boinc boinc 219946612 Sep 30 23:50 ATLAS.root_0
[2025-09-30 23:54:54] -rw-r--r--. 2 boinc boinc     15120 Sep 30 23:50 start_atlas.sh
[2025-09-30 23:54:54] -rw-r--r--. 2 boinc boinc    565603 Sep 30 23:50 input.tar.gz
[2025-09-30 23:54:54] -rw-------. 1 boinc boinc    133120 Sep 30 23:54 result.tar.gz
23:54:55 (2316818): run_atlas exited; CPU time 23.681900
23:54:55 (2316818): called boinc_finish(0)

</stderr_txt>
]]>

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