Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:31:37 (2286361): wrapper (7.7.26015): starting
15:31:37 (2286361): wrapper: running run_atlas (--nthreads 12)
[2025-09-30 15:31:37] Arguments: --nthreads 12
[2025-09-30 15:31:37] Threads: 12
[2025-09-30 15:31:37] Checking for CVMFS
[2025-09-30 15:31:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-09-30 15:31:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-09-30 15:31:38] Running cvmfs_config stat atlas.cern.ch
[2025-09-30 15:31:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-09-30 15:31:38] 2.11.5.0 2120 13242 211176 151195 1 861 30282979 45568001 22356 130560 0 72974962 99.732 63125826 20544 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-09-30 15:31:38] CVMFS is ok
[2025-09-30 15:31:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-09-30 15:31:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-09-30 15:31:38] Further information can be found at the LHC@home message board.
[2025-09-30 15:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-09-30 15:31:38] Checking for apptainer binary...
[2025-09-30 15:31:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-09-30 15:31:38] Running /usr/bin/apptainer --version
[2025-09-30 15:31:38] apptainer version 1.4.1-1.el9
[2025-09-30 15:31:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-09-30 15:31:39] wns0078.triumf.lcg
[2025-09-30 15:31:39] apptainer works
[2025-09-30 15:31:39] Set ATHENA_PROC_NUMBER=12
[2025-09-30 15:31:39] Set ATHENA_CORE_NUMBER=12
[2025-09-30 15:31:39] Starting ATLAS job with PandaID=6826164409
[2025-09-30 15:31:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-09-30 15:36:03]  *** The last 200 lines of the pilot log: ***
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | will not add max space = 0 B to job metrics
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | WARNING  | wrong length of table data, x=[1759271553.0], y=[879.0] (must be same and length>=4)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | could have reported an average CPU frequency of 2752 MHz (4 samples)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | ..............................
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | . Timing measurements:
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . get job = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . initial setup = 3 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . payload setup = 9 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . stage-in = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . payload execution = 25 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . stage-out = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . log creation = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | ..............................
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6826164409/pilotlog.txt
[2025-09-30 15:36:03] 2025-09-30 22:34:59,899 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-09-30 15:36:03] - Log from pilotlog.txt -
[2025-09-30 15:36:03] 2025-09-30 22:34:59,885 | INFO     | extracted standard memory fields from prmon json
[2025-09-30 15:36:03] 2025-09-30 22:34:59,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-09-30 15:36:03] 2025-09-30 22:34:59,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | WARNING  | found no stored workdir sizes
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | will not add max space = 0 B to job metrics
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | WARNING  | wrong length of table data, x=[1759271553.0], y=[879.0] (must be same and length>=4)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | could have reported an average CPU frequency of 2752 MHz (4 samples)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | ..............................
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | . Timing measurements:
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . get job = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . initial setup = 3 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . payload setup = 9 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . stage-in = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . payload execution = 25 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . stage-out = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . log creation = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | ..............................
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6826164409/pilotlog.txt
[2025-09-30 15:36:03] 2025-09-30 22:34:59,899 | WARNING  | 
[2025-09-30 15:36:03] [begin log extracts]
[2025-09-30 15:36:03] - Log from pilotlog.txt -
[2025-09-30 15:36:03] 2025-09-30 22:34:59,885 | INFO     | extracted standard memory fields from prmon json
[2025-09-30 15:36:03] 2025-09-30 22:34:59,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-09-30 15:36:03] 2025-09-30 22:34:59,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | WARNING  | found no stored workdir sizes
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | will not add max space = 0 B to job metrics
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | WARNING  | wrong length of table data, x=[1759271553.0], y=[879.0] (must be same and length>=4)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | could have reported an average CPU frequency of 2752 MHz (4 samples)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | ..............................
[2025-09-30 15:36:03] 2025-09-30 22:34:59,886 | INFO     | . Timing measurements:
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . get job = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . initial setup = 3 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . payload setup = 9 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . stage-in = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . payload execution = 25 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . stage-out = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | . log creation = 0 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | ..............................
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-09-30 15:36:03] 2025-09-30 22:34:59,887 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6826164409/pilotlog.txt
[2025-09-30 15:36:03] [end log extracts]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,899 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,900 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | 
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | job summary report
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | --------------------------------------------------
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | PanDA job id: 6826164409
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | task id: 46373048
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-09-30 15:32:45,796 CRITICAL Transform executor raised TransformValidationExceptio
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | pilot state: failed 
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | transexitcode: 65
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | exeerrorcode: 65
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | exitcode: 65
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | cpuconsumptiontime: 16 s
[2025-09-30 15:36:03] 2025-09-30 22:34:59,965 | INFO     | nevents: 0
[2025-09-30 15:36:03] 2025-09-30 22:34:59,966 | INFO     | neventsw: 0
[2025-09-30 15:36:03] 2025-09-30 22:34:59,966 | INFO     | pid: 2296683
[2025-09-30 15:36:03] 2025-09-30 22:34:59,966 | INFO     | pgrp: 2296683
[2025-09-30 15:36:03] 2025-09-30 22:34:59,966 | INFO     | corecount: 12
[2025-09-30 15:36:03] 2025-09-30 22:34:59,966 | INFO     | event service: False
[2025-09-30 15:36:03] 2025-09-30 22:34:59,966 | INFO     | sizes: {0: 2348611, 1: 2348866, 9: 2349128, 12: 2349156, 37: 2372440, 38: 2376888, 164: 2377026}
[2025-09-30 15:36:03] 2025-09-30 22:34:59,966 | INFO     | --------------------------------------------------
[2025-09-30 15:36:03] 2025-09-30 22:34:59,966 | INFO     | 
[2025-09-30 15:36:03] 2025-09-30 22:34:59,966 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-09-30 15:36:03] 2025-09-30 22:34:59,990 | INFO     | queue jobs had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue payloads had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue data_in had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue data_out had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,992 | INFO     | queue completed_jobids has 1 job(s)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,992 | INFO     | queue messages had 0 job(s) [purged]
[2025-09-30 15:36:03] 2025-09-30 22:34:59,992 | INFO     | job 6826164409 has completed (purged errors)
[2025-09-30 15:36:03] 2025-09-30 22:34:59,992 | INFO     | overall cleanup function is called
[2025-09-30 15:36:03] 2025-09-30 22:35:00,998 | INFO     | --- collectZombieJob: --- 10, [2296683]
[2025-09-30 15:36:03] 2025-09-30 22:35:00,999 | INFO     | zombie collector waiting for pid 2296683
[2025-09-30 15:36:03] 2025-09-30 22:35:00,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-09-30 15:36:03] 2025-09-30 22:35:00,999 | INFO     | collected zombie processes
[2025-09-30 15:36:03] 2025-09-30 22:35:00,999 | INFO     | will attempt to kill all subprocesses of pid=2296683
[2025-09-30 15:36:03] 2025-09-30 22:35:01,220 | INFO     | process IDs to be killed: [2296683] (in reverse order)
[2025-09-30 15:36:03] 2025-09-30 22:35:01,310 | WARNING  | found no corresponding commands to process id(s)
[2025-09-30 15:36:03] 2025-09-30 22:35:01,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-09-30 15:36:03] 2025-09-30 22:35:01,362 | INFO     | did not find any defunct processes belonging to 2296683
[2025-09-30 15:36:03] 2025-09-30 22:35:01,370 | INFO     | did not find any defunct processes belonging to 2296683
[2025-09-30 15:36:03] 2025-09-30 22:35:01,371 | INFO     | ready for new job
[2025-09-30 15:36:03] 2025-09-30 22:35:01,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-09-30 15:36:03] 2025-09-30 22:35:01,372 | INFO     | ***************************************
[2025-09-30 15:36:03] 2025-09-30 22:35:01,372 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-09-30 15:36:03] 2025-09-30 22:35:01,372 | INFO     | ***************************************
[2025-09-30 15:36:03] 2025-09-30 22:35:01,372 | INFO     | 
[2025-09-30 15:36:03] 2025-09-30 22:35:01,374 | INFO     | architecture information:
[2025-09-30 15:36:03] 2025-09-30 22:35:01,374 | INFO     | executing command: cat /etc/os-release
[2025-09-30 15:36:03] 2025-09-30 22:35:01,389 | INFO     | cat /etc/os-release:
[2025-09-30 15:36:03] NAME="CentOS Linux"
[2025-09-30 15:36:03] VERSION="7 (Core)"
[2025-09-30 15:36:03] ID="centos"
[2025-09-30 15:36:03] ID_LIKE="rhel fedora"
[2025-09-30 15:36:03] VERSION_ID="7"
[2025-09-30 15:36:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-09-30 15:36:03] ANSI_COLOR="0;31"
[2025-09-30 15:36:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-09-30 15:36:03] HOME_URL="https://www.centos.org/"
[2025-09-30 15:36:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-09-30 15:36:03] 
[2025-09-30 15:36:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-09-30 15:36:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-09-30 15:36:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-09-30 15:36:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-09-30 15:36:03] 
[2025-09-30 15:36:03] 2025-09-30 22:35:01,389 | INFO     | ***************************************
[2025-09-30 15:36:03] 2025-09-30 22:35:01,892 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-09-30 15:36:03] 2025-09-30 22:35:01,919 | INFO     | sufficient remaining disk space (1580978929664 B)
[2025-09-30 15:36:03] 2025-09-30 22:35:01,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-09-30 15:36:03] 2025-09-30 22:35:01,920 | INFO     | current server update state: UPDATING_FINAL
[2025-09-30 15:36:03] 2025-09-30 22:35:01,920 | INFO     | update_server=False
[2025-09-30 15:36:03] 2025-09-30 22:35:01,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-09-30 15:36:03] 2025-09-30 22:35:01,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-09-30 15:36:03] 2025-09-30 22:35:01,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-09-30 15:36:03] 2025-09-30 22:35:02,068 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-09-30 15:36:03] 2025-09-30 22:35:02,069 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-09-30 15:36:03] 2025-09-30 22:35:02,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-09-30 15:36:03] 2025-09-30 22:35:02,069 | INFO     | will abort loop
[2025-09-30 15:36:03] 2025-09-30 22:35:02,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-09-30 15:36:03] 2025-09-30 22:35:02,243 | INFO     | all job control threads have been joined
[2025-09-30 15:36:03] 2025-09-30 22:35:02,312 | INFO     | all data control threads have been joined
[2025-09-30 15:36:03] 2025-09-30 22:35:02,925 | INFO     | [job] retrieve thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:02,926 | INFO     | [job] queue monitor thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:03,059 | INFO     | all payload control threads have been joined
[2025-09-30 15:36:03] 2025-09-30 22:35:03,075 | INFO     | [job] job monitor thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:03,219 | INFO     | [payload] failed_post thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:03,249 | INFO     | [job] control thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:03,319 | INFO     | [data] control thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:03,457 | INFO     | [data] copytool_in thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:03,700 | INFO     | [job] validate thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:03,977 | INFO     | [payload] execute_payloads thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:04,065 | INFO     | [payload] control thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:04,145 | INFO     | [payload] validate_post thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:04,165 | INFO     | [job] create_data_payload thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:04,202 | INFO     | [data] copytool_out thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:04,207 | INFO     | [payload] run_realtimelog thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:04,295 | INFO     | [payload] validate_pre thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:05,929 | INFO     | [data] queue_monitor thread has finished
[2025-09-30 15:36:03] 2025-09-30 22:35:32,146 | INFO     | PID=2290065 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-09-30 15:36:03] 2025-09-30 22:35:32,146 | INFO     | .. there are 35 such processes running
[2025-09-30 15:36:03] 2025-09-30 22:35:32,146 | INFO     | found 0 job(s) in 20 queues
[2025-09-30 15:36:03] 2025-09-30 22:35:32,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-09-30 15:36:03] 2025-09-30 22:35:32,146 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-09-30 15:36:03] 2025-09-30 22:35:56,794 | INFO     | [monitor] cgroup control has ended
[2025-09-30 15:36:03] 2025-09-30 22:35:57,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983182071616)>', '<ExcThread(monitor, started 139982496847616)>']
[2025-09-30 15:36:03] 2025-09-30 22:35:58,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-09-30 15:36:03] 2025-09-30 22:35:58,328 | INFO     | [monitor] control thread has ended
[2025-09-30 15:36:03] 2025-09-30 22:36:02,832 | INFO     | all workflow threads have been joined
[2025-09-30 15:36:03] 2025-09-30 22:36:02,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-09-30 15:36:03] 2025-09-30 22:36:02,833 | INFO     | traces error code: 0
[2025-09-30 15:36:03] 2025-09-30 22:36:02,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-09-30 15:36:03] 2025-09-30 22:36:03,049 [wrapper] ==== pilot stdout END ====
[2025-09-30 15:36:03] 2025-09-30 22:36:03,055 [wrapper] ==== wrapper stdout RESUME ====
[2025-09-30 15:36:03] 2025-09-30 22:36:03,063 [wrapper] pilotpid: 2290065
[2025-09-30 15:36:03] 2025-09-30 22:36:03,074 [wrapper] Pilot exit status: 0
[2025-09-30 15:36:03] 2025-09-30 22:36:03,143 [wrapper] pandaids: 6826164409
[2025-09-30 15:36:03] 2025-09-30 22:36:03,556 [wrapper] cleanup supervisor_pilot 2290071 2290066
[2025-09-30 15:36:03] 2025-09-30 22:36:03,559 [wrapper] Test setup, not cleaning
[2025-09-30 15:36:03] 2025-09-30 22:36:03,561 [wrapper] apfmon messages muted
[2025-09-30 15:36:03] 2025-09-30 22:36:03,563 [wrapper] ==== wrapper stdout END ====
[2025-09-30 15:36:03] 2025-09-30 22:36:03,564 [wrapper] ==== wrapper stderr END ====
[2025-09-30 15:36:03]  *** Error codes and diagnostics ***
[2025-09-30 15:36:03]     "exeErrorCode": 65,
[2025-09-30 15:36:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-09-30 15:36:03]     "pilotErrorCode": 1305,
[2025-09-30 15:36:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-09-30 15:36:03]  *** Listing of results directory ***
[2025-09-30 15:36:03] total 219436
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc    552446 Sep 30 13:04 pilot3.tar.gz
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc      5112 Sep 30 13:10 queuedata.json
[2025-09-30 15:36:03] -rwx------. 1 boinc boinc     36292 Sep 30 13:10 runpilot2-wrapper.sh
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc       100 Sep 30 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-09-30 15:36:03] -rwxr-xr-x. 1 boinc boinc      7986 Sep 30 15:31 run_atlas
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc       105 Sep 30 15:31 job.xml
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc      6593 Sep 30 15:31 init_data.xml
[2025-09-30 15:36:03] -rw-r--r--. 2 boinc boinc 220607975 Sep 30 15:31 EVNT.46373045._002303.pool.root.1
[2025-09-30 15:36:03] -rw-r--r--. 2 boinc boinc     15120 Sep 30 15:31 start_atlas.sh
[2025-09-30 15:36:03] drwxrwx--x. 2 boinc boinc      4096 Sep 30 15:31 shared
[2025-09-30 15:36:03] -rw-r--r--. 2 boinc boinc    565608 Sep 30 15:31 input.tar.gz
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc         0 Sep 30 15:31 boinc_lockfile
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc      2538 Sep 30 15:31 pandaJob.out
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc    978003 Sep 30 15:31 agis_schedconf.cvmfs.json
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc   1560051 Sep 30 15:31 agis_ddmendpoints.agis.ALL.json
[2025-09-30 15:36:03] drwx------. 4 boinc boinc      4096 Sep 30 15:31 pilot3
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc       974 Sep 30 15:32 memory_monitor_summary.json
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc     21036 Sep 30 15:32 log.46373048._070319.job.log.tgz.1
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc        95 Sep 30 15:34 pilot_heartbeat.json
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc      8418 Sep 30 15:34 heartbeat.json
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc       523 Sep 30 15:35 boinc_task_state.xml
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc        22 Sep 30 15:35 wrapper_checkpoint.txt
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc      8192 Sep 30 15:35 boinc_mmap_file
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc      5009 Sep 30 15:36 pilotlog.txt
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc     84815 Sep 30 15:36 log.46373048._070319.job.log.1
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc       188 Sep 30 15:36 output.list
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc       620 Sep 30 15:36 runtime_log
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc    122880 Sep 30 15:36 result.tar.gz
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc      8528 Sep 30 15:36 runtime_log.err
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc       644 Sep 30 15:36 FVPODmkrvN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIq9MDmBuvvIm.diag
[2025-09-30 15:36:03] -rw-r--r--. 1 boinc boinc     21669 Sep 30 15:36 stderr.txt
[2025-09-30 15:36:03] No HITS result produced
[2025-09-30 15:36:03]  *** Contents of shared directory: ***
[2025-09-30 15:36:03] total 216132
[2025-09-30 15:36:03] -rw-r--r--. 2 boinc boinc 220607975 Sep 30 15:31 ATLAS.root_0
[2025-09-30 15:36:03] -rw-r--r--. 2 boinc boinc     15120 Sep 30 15:31 start_atlas.sh
[2025-09-30 15:36:03] -rw-r--r--. 2 boinc boinc    565608 Sep 30 15:31 input.tar.gz
[2025-09-30 15:36:03] -rw-------. 1 boinc boinc    122880 Sep 30 15:36 result.tar.gz
15:36:05 (2286361): run_atlas exited; CPU time 23.094633
15:36:05 (2286361): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN