Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
03:42:49 (1108690): wrapper (7.7.26015): starting
03:42:49 (1108690): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 03:42:49] Arguments: --nthreads 12
[2025-10-07 03:42:49] Threads: 12
[2025-10-07 03:42:49] Checking for CVMFS
[2025-10-07 03:42:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 03:42:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 03:42:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 03:42:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 03:42:50] 2.11.0.0 1015165 46 46468 151422 1 188 4539693 6144001 2769 130560 0 215286 99.991 5380 415 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-07 03:42:50] CVMFS is ok
[2025-10-07 03:42:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 03:42:50] Checking for apptainer binary...
[2025-10-07 03:42:50] apptainer is not installed, using version from CVMFS
[2025-10-07 03:42:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 03:42:50] radiat0r
[2025-10-07 03:42:50] apptainer works
[2025-10-07 03:42:50] Set ATHENA_PROC_NUMBER=12
[2025-10-07 03:42:50] Set ATHENA_CORE_NUMBER=12
[2025-10-07 03:42:50] Starting ATLAS job with PandaID=6826040320
[2025-10-07 03:42:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/60 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 04:27:31]  *** The last 200 lines of the pilot log: ***
[2025-10-07 04:27:31]  storage_token=
[2025-10-07 04:27:31]  surl=/var/lib/boinc/slots/60/PanDA_Pilot-6826040320/log.46373048._061087.job.log.tgz.1
[2025-10-07 04:27:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/eb/log.46373048._061087.job.log.tgz.1
[2025-10-07 04:27:31]  workdir=None
[2025-10-07 04:27:31] ]
[2025-10-07 04:27:31] 2025-10-07 04:26:49,736 | INFO     | transferring file log.46373048._061087.job.log.tgz.1 from /var/lib/boinc/slots/60/PanDA_Pilot-6826040320/log.46373048._061087.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-07 04:27:31] 2025-10-07 04:26:49,737 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/60/PanDA_Pilot-6826040320/log.46373048._061087.job.log.tgz.1 /var/lib/boinc/slots/60/log.46373048._061087.j
[2025-10-07 04:27:31] 2025-10-07 04:26:49,759 | INFO     | adding to output.list: log.46373048._061087.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/eb/log.46373048._061087.job.log.tg
[2025-10-07 04:27:31] 2025-10-07 04:26:49,759 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 04:27:31] 2025-10-07 04:26:49,759 | INFO     | summary of transferred files:
[2025-10-07 04:27:31] 2025-10-07 04:26:49,759 | INFO     |  -- lfn=log.46373048._061087.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 04:27:31] 2025-10-07 04:26:49,759 | INFO     | stage-out finished correctly
[2025-10-07 04:27:31] 2025-10-07 04:26:50,095 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 04:27:31] 2025-10-07 04:26:51,028 | INFO     | time since job start (2629s) is within the limit (172800.0s)
[2025-10-07 04:27:31] 2025-10-07 04:26:52,588 | INFO     | PID=1113396 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-07 04:27:31] 2025-10-07 04:26:52,588 | INFO     | .. there are 2 such processes running
[2025-10-07 04:27:31] 2025-10-07 04:26:52,610 | INFO     | job 6826040320 has state=finished
[2025-10-07 04:27:31] 2025-10-07 04:26:52,611 | INFO     | preparing for final server update for job 6826040320 in state='finished'
[2025-10-07 04:27:31] 2025-10-07 04:26:53,286 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-07 04:27:31] 2025-10-07 04:26:53,287 | INFO     | this job has now completed (state=finished)
[2025-10-07 04:27:31] 2025-10-07 04:26:53,287 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 04:27:31] 2025-10-07 04:26:53,287 | INFO     | log transfer has been attempted: DONE
[2025-10-07 04:27:31] 2025-10-07 04:26:53,287 | INFO     | job 6826040320 has finished - writing final server update
[2025-10-07 04:27:31] 2025-10-07 04:26:53,287 | INFO     | total number of processed events: 400 (read)
[2025-10-07 04:27:31] 2025-10-07 04:26:53,290 | INFO     | executing command: lscpu
[2025-10-07 04:27:31] 2025-10-07 04:26:53,440 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 04:27:31] 2025-10-07 04:26:53,589 | INFO     | time since job start (2631s) is within the limit (172800.0s)
[2025-10-07 04:27:31] 2025-10-07 04:26:55,596 | INFO     | time since job start (2633s) is within the limit (172800.0s)
[2025-10-07 04:27:31] 2025-10-07 04:26:56,022 | WARNING  | process 1121510 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 04:27:31] 2025-10-07 04:26:56,023 | INFO     | using path: /var/lib/boinc/slots/60/PanDA_Pilot-6826040320/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 04:27:31] 2025-10-07 04:26:56,469 | INFO     | number of running child processes to parent process 1121510: 1
[2025-10-07 04:27:31] 2025-10-07 04:26:56,470 | INFO     | maximum number of monitored processes: 6
[2025-10-07 04:27:31] 2025-10-07 04:26:57,602 | INFO     | time since job start (2635s) is within the limit (172800.0s)
[2025-10-07 04:27:31] 2025-10-07 04:26:58,127 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 04:27:31] 2025-10-07 04:26:58,184 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2704.3589531249995
[2025-10-07 04:27:31] 2025-10-07 04:26:58,247 | INFO     | using path: /var/lib/boinc/slots/60/PanDA_Pilot-6826040320/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 04:27:31] 2025-10-07 04:26:58,248 | INFO     | extracted standard info from prmon json
[2025-10-07 04:27:31] 2025-10-07 04:26:58,248 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 04:27:31] 2025-10-07 04:26:58,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 04:27:31] 2025-10-07 04:26:58,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 04:27:31] 2025-10-07 04:26:58,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 04:27:31] 2025-10-07 04:26:58,249 | INFO     | fitting pss+swap vs Time
[2025-10-07 04:27:31] 2025-10-07 04:26:58,249 | INFO     | sum of square deviations: 14456085.0
[2025-10-07 04:27:31] 2025-10-07 04:26:58,250 | INFO     | sum of deviations: -833091640.0
[2025-10-07 04:27:31] 2025-10-07 04:26:58,250 | INFO     | mean x: 1759809981.5
[2025-10-07 04:27:31] 2025-10-07 04:26:58,250 | INFO     | mean y: 2764878.3333333335
[2025-10-07 04:27:31] 2025-10-07 04:26:58,250 | INFO     | -- intersect: 101419087733.11765
[2025-10-07 04:27:31] 2025-10-07 04:26:58,250 | INFO     | intersect: 101419087733.11765
[2025-10-07 04:27:31] 2025-10-07 04:26:58,250 | INFO     | chi2: 0.0049349410083397065
[2025-10-07 04:27:31] 2025-10-07 04:26:58,250 | INFO     | -- intersect: 101419087733.11765
[2025-10-07 04:27:31] 2025-10-07 04:26:58,250 | INFO     | current memory leak: -57.63 B/s (using 36 data points, chi2=0.00)
[2025-10-07 04:27:31] 2025-10-07 04:26:58,250 | INFO     | could have reported an average CPU frequency of 2785 MHz (5 samples)
[2025-10-07 04:27:31] 2025-10-07 04:26:58,250 | INFO     | ..............................
[2025-10-07 04:27:31] 2025-10-07 04:26:58,251 | INFO     | . Timing measurements:
[2025-10-07 04:27:31] 2025-10-07 04:26:58,251 | INFO     | . get job = 0 s
[2025-10-07 04:27:31] 2025-10-07 04:26:58,251 | INFO     | . initial setup = 3 s
[2025-10-07 04:27:31] 2025-10-07 04:26:58,251 | INFO     | . payload setup = 5 s
[2025-10-07 04:27:31] 2025-10-07 04:26:58,251 | INFO     | . stage-in = 0 s
[2025-10-07 04:27:31] 2025-10-07 04:26:58,251 | INFO     | . payload execution = 2601 s
[2025-10-07 04:27:31] 2025-10-07 04:26:58,251 | INFO     | . stage-out = 0 s
[2025-10-07 04:27:31] 2025-10-07 04:26:58,251 | INFO     | . log creation = 0 s
[2025-10-07 04:27:31] 2025-10-07 04:26:58,251 | INFO     | ..............................
[2025-10-07 04:27:31] 2025-10-07 04:26:58,699 | INFO     | 
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | job summary report
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | --------------------------------------------------
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | PanDA job id: 6826040320
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | task id: 46373048
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | errors: (none)
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | pilot state: finished 
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | transexitcode: 0
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | exeerrorcode: 0
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | exeerrordiag: 
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | exitcode: 0
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | exitmsg: OK
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | cpuconsumptiontime: 27682 s
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | nevents: 400
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | neventsw: 0
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | pid: 1121510
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | pgrp: 1121510
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | corecount: 12
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | event service: False
[2025-10-07 04:27:31] 2025-10-07 04:26:58,700 | INFO     | sizes: {0: 2348728, 1: 2348870, 5: 2349132, 11: 2349188, 2610: 2374434, 2611: 2383617, 2620: 2383787}
[2025-10-07 04:27:31] 2025-10-07 04:26:58,701 | INFO     | --------------------------------------------------
[2025-10-07 04:27:31] 2025-10-07 04:26:58,701 | INFO     | 
[2025-10-07 04:27:31] 2025-10-07 04:26:58,701 | INFO     | executing command: ls -lF /var/lib/boinc/slots/60
[2025-10-07 04:27:31] 2025-10-07 04:26:58,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 04:27:31] 2025-10-07 04:26:58,725 | INFO     | job 6826040320 has completed (purged errors)
[2025-10-07 04:27:31] 2025-10-07 04:26:58,726 | INFO     | overall cleanup function is called
[2025-10-07 04:27:31] 2025-10-07 04:26:59,734 | INFO     | --- collectZombieJob: --- 10, [1121510]
[2025-10-07 04:27:31] 2025-10-07 04:26:59,735 | INFO     | zombie collector waiting for pid 1121510
[2025-10-07 04:27:31] 2025-10-07 04:26:59,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 04:27:31] 2025-10-07 04:26:59,735 | INFO     | collected zombie processes
[2025-10-07 04:27:31] 2025-10-07 04:26:59,735 | INFO     | will attempt to kill all subprocesses of pid=1121510
[2025-10-07 04:27:31] 2025-10-07 04:27:00,214 | INFO     | process IDs to be killed: [1121510] (in reverse order)
[2025-10-07 04:27:31] 2025-10-07 04:27:00,397 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 04:27:31] 2025-10-07 04:27:00,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 04:27:31] 2025-10-07 04:27:00,415 | INFO     | did not find any defunct processes belonging to 1121510
[2025-10-07 04:27:31] 2025-10-07 04:27:00,429 | INFO     | did not find any defunct processes belonging to 1121510
[2025-10-07 04:27:31] 2025-10-07 04:27:00,429 | INFO     | ready for new job
[2025-10-07 04:27:31] 2025-10-07 04:27:00,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 04:27:31] 2025-10-07 04:27:00,431 | INFO     | ***************************************
[2025-10-07 04:27:31] 2025-10-07 04:27:00,431 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 04:27:31] 2025-10-07 04:27:00,431 | INFO     | ***************************************
[2025-10-07 04:27:31] 2025-10-07 04:27:00,432 | INFO     | 
[2025-10-07 04:27:31] 2025-10-07 04:27:00,475 | INFO     | architecture information:
[2025-10-07 04:27:31] 2025-10-07 04:27:00,475 | INFO     | executing command: cat /etc/os-release
[2025-10-07 04:27:31] 2025-10-07 04:27:00,494 | INFO     | cat /etc/os-release:
[2025-10-07 04:27:31] NAME="CentOS Linux"
[2025-10-07 04:27:31] VERSION="7 (Core)"
[2025-10-07 04:27:31] ID="centos"
[2025-10-07 04:27:31] ID_LIKE="rhel fedora"
[2025-10-07 04:27:31] VERSION_ID="7"
[2025-10-07 04:27:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 04:27:31] ANSI_COLOR="0;31"
[2025-10-07 04:27:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 04:27:31] HOME_URL="https://www.centos.org/"
[2025-10-07 04:27:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 04:27:31] 
[2025-10-07 04:27:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 04:27:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 04:27:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 04:27:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 04:27:31] 
[2025-10-07 04:27:31] 2025-10-07 04:27:00,495 | INFO     | ***************************************
[2025-10-07 04:27:31] 2025-10-07 04:27:00,998 | INFO     | executing command: df -mP /var/lib/boinc/slots/60
[2025-10-07 04:27:31] 2025-10-07 04:27:01,020 | INFO     | sufficient remaining disk space (1644944162816 B)
[2025-10-07 04:27:31] 2025-10-07 04:27:01,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 04:27:31] 2025-10-07 04:27:01,021 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 04:27:31] 2025-10-07 04:27:01,021 | INFO     | update_server=False
[2025-10-07 04:27:31] 2025-10-07 04:27:01,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 04:27:31] 2025-10-07 04:27:01,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 04:27:31] 2025-10-07 04:27:01,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 04:27:31] 2025-10-07 04:27:01,023 | INFO     | all payload control threads have been joined
[2025-10-07 04:27:31] 2025-10-07 04:27:01,327 | INFO     | all data control threads have been joined
[2025-10-07 04:27:31] 2025-10-07 04:27:01,480 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 04:27:31] 2025-10-07 04:27:01,481 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 04:27:31] 2025-10-07 04:27:01,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 04:27:31] 2025-10-07 04:27:01,481 | INFO     | will abort loop
[2025-10-07 04:27:31] 2025-10-07 04:27:01,771 | INFO     | all job control threads have been joined
[2025-10-07 04:27:31] 2025-10-07 04:27:02,026 | INFO     | [job] retrieve thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:02,027 | INFO     | [payload] control thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:02,165 | INFO     | [payload] failed_post thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:02,194 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:02,333 | INFO     | [data] control thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:02,486 | INFO     | [job] job monitor thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:02,712 | INFO     | [job] validate thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:02,776 | INFO     | [job] control thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:02,861 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:02,922 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:03,025 | INFO     | [payload] validate_post thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:03,027 | INFO     | [data] copytool_out thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:03,252 | INFO     | [data] copytool_in thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:03,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 04:27:31] 2025-10-07 04:27:04,326 | INFO     | [job] queue monitor thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:05,028 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:06,536 | INFO     | [monitor] cgroup control has ended
[2025-10-07 04:27:31] 2025-10-07 04:27:11,168 | INFO     | job.realtimelogging is not enabled
[2025-10-07 04:27:31] 2025-10-07 04:27:12,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 04:27:31] 2025-10-07 04:27:13,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140266110265152)>', '<ExcThread(monitor, started 140265671075584)>']
[2025-10-07 04:27:31] 2025-10-07 04:27:18,321 | INFO     | all workflow threads have been joined
[2025-10-07 04:27:31] 2025-10-07 04:27:18,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 04:27:31] 2025-10-07 04:27:18,322 | INFO     | traces error code: 0
[2025-10-07 04:27:31] 2025-10-07 04:27:18,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 04:27:31] 2025-10-07 04:27:31,239 | INFO     | PID=1113396 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 04:27:31] 2025-10-07 04:27:31,239 | INFO     | .. there are 2 such processes running
[2025-10-07 04:27:31] 2025-10-07 04:27:31,240 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 04:27:31] 2025-10-07 04:27:31,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 04:27:31] 2025-10-07 04:27:31,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 04:27:31] 2025-10-07 04:27:31,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 04:27:31] 2025-10-07 04:27:31,240 | INFO     | [monitor] control thread has ended
[2025-10-07 04:27:31] 2025-10-07 04:27:31,350 [wrapper] ==== pilot stdout END ====
[2025-10-07 04:27:31] 2025-10-07 04:27:31,353 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 04:27:31] 2025-10-07 04:27:31,356 [wrapper] pilotpid: 1113396
[2025-10-07 04:27:31] 2025-10-07 04:27:31,358 [wrapper] Pilot exit status: 0
[2025-10-07 04:27:31] 2025-10-07 04:27:31,369 [wrapper] pandaids: 6826040320
[2025-10-07 04:27:31] 2025-10-07 04:27:31,478 [wrapper] cleanup supervisor_pilot 1144119 1113397
[2025-10-07 04:27:31] 2025-10-07 04:27:31,481 [wrapper] Test setup, not cleaning
[2025-10-07 04:27:31] 2025-10-07 04:27:31,484 [wrapper] apfmon messages muted
[2025-10-07 04:27:31] 2025-10-07 04:27:31,486 [wrapper] ==== wrapper stdout END ====
[2025-10-07 04:27:31] 2025-10-07 04:27:31,489 [wrapper] ==== wrapper stderr END ====
[2025-10-07 04:27:31]  *** Error codes and diagnostics ***
[2025-10-07 04:27:31]     "exeErrorCode": 0,
[2025-10-07 04:27:31]     "exeErrorDiag": "",
[2025-10-07 04:27:31]     "pilotErrorCode": 0,
[2025-10-07 04:27:31]     "pilotErrorDiag": "",
[2025-10-07 04:27:31]  *** Listing of results directory ***
[2025-10-07 04:27:31] total 413636
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc    552446 Sep 30 13:19 pilot3.tar.gz
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc      5112 Sep 30 13:35 queuedata.json
[2025-10-07 04:27:31] -rwx------ 1 boinc boinc     36292 Sep 30 13:37 runpilot2-wrapper.sh
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc       100 Oct  7 03:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 04:27:31] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 03:42 run_atlas
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc       105 Oct  7 03:42 job.xml
[2025-10-07 04:27:31] -rw-r--r-- 2 boinc boinc     15120 Oct  7 03:42 start_atlas.sh
[2025-10-07 04:27:31] drwxrwx--x 2 boinc boinc      4096 Oct  7 03:42 shared
[2025-10-07 04:27:31] -rw-r--r-- 2 boinc boinc    565605 Oct  7 03:42 input.tar.gz
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc      9396 Oct  7 03:42 init_data.xml
[2025-10-07 04:27:31] -rw-r--r-- 2 boinc boinc 218890253 Oct  7 03:42 EVNT.46373045._001932.pool.root.1
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc         0 Oct  7 03:42 boinc_setup_complete
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc         0 Oct  7 03:42 boinc_lockfile
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc      2538 Oct  7 03:42 pandaJob.out
[2025-10-07 04:27:31] -rw------- 1 boinc boinc    974984 Oct  7 03:42 agis_schedconf.cvmfs.json
[2025-10-07 04:27:31] -rw------- 1 boinc boinc   1560401 Oct  7 03:43 agis_ddmendpoints.agis.ALL.json
[2025-10-07 04:27:31] drwx------ 4 boinc boinc      4096 Oct  7 03:43 pilot3
[2025-10-07 04:27:31] -rw------- 1 boinc boinc 199259228 Oct  7 04:26 HITS.46373048._061087.pool.root.1
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc       529 Oct  7 04:26 boinc_task_state.xml
[2025-10-07 04:27:31] -rw------- 1 boinc boinc      1022 Oct  7 04:26 memory_monitor_summary.json
[2025-10-07 04:27:31] -rw------- 1 boinc boinc    361845 Oct  7 04:26 log.46373048._061087.job.log.tgz.1
[2025-10-07 04:27:31] -rw------- 1 boinc boinc        95 Oct  7 04:26 pilot_heartbeat.json
[2025-10-07 04:27:31] -rw------- 1 boinc boinc      7741 Oct  7 04:26 heartbeat.json
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc        27 Oct  7 04:27 wrapper_checkpoint.txt
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc      8192 Oct  7 04:27 boinc_mmap_file
[2025-10-07 04:27:31] -rw------- 1 boinc boinc       822 Oct  7 04:27 pilotlog.txt
[2025-10-07 04:27:31] -rw------- 1 boinc boinc    400393 Oct  7 04:27 log.46373048._061087.job.log.1
[2025-10-07 04:27:31] -rw------- 1 boinc boinc       357 Oct  7 04:27 output.list
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc       620 Oct  7 04:27 runtime_log
[2025-10-07 04:27:31] -rw------- 1 boinc boinc    778240 Oct  7 04:27 result.tar.gz
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc      8672 Oct  7 04:27 runtime_log.err
[2025-10-07 04:27:31] -rw------- 1 boinc boinc       643 Oct  7 04:27 aTpLDmNjpN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm967MDmiyVtvm.diag
[2025-10-07 04:27:31] -rw-r--r-- 1 boinc boinc     21918 Oct  7 04:27 stderr.txt
[2025-10-07 04:27:31] HITS file was successfully produced:
[2025-10-07 04:27:31] -rw------- 1 boinc boinc 199259228 Oct  7 04:26 shared/HITS.pool.root.1
[2025-10-07 04:27:31]  *** Contents of shared directory: ***
[2025-10-07 04:27:31] total 409696
[2025-10-07 04:27:31] -rw-r--r-- 2 boinc boinc     15120 Oct  7 03:42 start_atlas.sh
[2025-10-07 04:27:31] -rw-r--r-- 2 boinc boinc    565605 Oct  7 03:42 input.tar.gz
[2025-10-07 04:27:31] -rw-r--r-- 2 boinc boinc 218890253 Oct  7 03:42 ATLAS.root_0
[2025-10-07 04:27:31] -rw------- 1 boinc boinc 199259228 Oct  7 04:26 HITS.pool.root.1
[2025-10-07 04:27:31] -rw------- 1 boinc boinc    778240 Oct  7 04:27 result.tar.gz
04:27:33 (1108690): run_atlas exited; CPU time 27761.667572
04:27:33 (1108690): called boinc_finish(0)

</stderr_txt>
]]>

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