Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:07:35 (3858188): wrapper (7.7.26015): starting
14:07:35 (3858188): wrapper: running run_atlas (--nthreads 12)
[2025-07-29 14:07:35] Arguments: --nthreads 12
[2025-07-29 14:07:35] Threads: 12
[2025-07-29 14:07:35] Checking for CVMFS
[2025-07-29 14:07:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 14:07:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 14:07:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 14:07:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 14:07:36] 2.12.6.0 2794239 21585 338524 148894 0 445 30777886 40960000 11063 16776704 1 50907472 99.740 55423219 24148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-29 14:07:36] CVMFS is ok
[2025-07-29 14:07:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 14:07:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 14:07:36] Further information can be found at the LHC@home message board.
[2025-07-29 14:07:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 14:07:36] Checking for apptainer binary...
[2025-07-29 14:07:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-29 14:07:36] Running /usr/bin/apptainer --version
[2025-07-29 14:07:36] apptainer version 1.4.1-1.el9
[2025-07-29 14:07:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 14:07:36] c6-8-12-4.aglt2.org
[2025-07-29 14:07:36] apptainer works
[2025-07-29 14:07:36] Set ATHENA_PROC_NUMBER=12
[2025-07-29 14:07:36] Set ATHENA_CORE_NUMBER=12
[2025-07-29 14:07:36] Starting ATLAS job with PandaID=6746741973
[2025-07-29 14:07:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 15:35:10]  *** The last 200 lines of the pilot log: ***
[2025-07-29 15:35:10]  storage_token=
[2025-07-29 15:35:10]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746741973/log.45759704._000007.job.log.tgz.1
[2025-07-29 15:35:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/8e/log.45759704._000007.job.log.tgz.1
[2025-07-29 15:35:10]  workdir=None
[2025-07-29 15:35:10] ]
[2025-07-29 15:35:10] 2025-07-29 19:34:26,751 | INFO     | transferring file log.45759704._000007.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746741973/log.45759704._000007.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-29 15:35:10] 2025-07-29 19:34:26,752 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746741973/log.45759704._000007.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759704._000007.job
[2025-07-29 15:35:10] 2025-07-29 19:34:26,769 | INFO     | adding to output.list: log.45759704._000007.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/8e/log.45759704._000007.job.log.tg
[2025-07-29 15:35:10] 2025-07-29 19:34:26,770 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-29 15:35:10] 2025-07-29 19:34:26,770 | INFO     | summary of transferred files:
[2025-07-29 15:35:10] 2025-07-29 19:34:26,770 | INFO     |  -- lfn=log.45759704._000007.job.log.tgz.1, status_code=0, status=transferred
[2025-07-29 15:35:10] 2025-07-29 19:34:26,770 | INFO     | stage-out finished correctly
[2025-07-29 15:35:10] 2025-07-29 19:34:27,129 | INFO     | monitor loop #378: job 0:6746741973 is in state 'finished'
[2025-07-29 15:35:10] 2025-07-29 19:34:27,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 15:35:10] 2025-07-29 19:34:27,671 | INFO     | PID=3861769 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-29 15:35:10] 2025-07-29 19:34:27,671 | INFO     | .. there are 14 such processes running
[2025-07-29 15:35:10] 2025-07-29 19:34:29,633 | INFO     | monitor loop #379: job 0:6746741973 is in state 'finished'
[2025-07-29 15:35:10] 2025-07-29 19:34:29,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 15:35:10] 2025-07-29 19:34:29,667 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-29 15:35:10] 2025-07-29 19:34:30,685 | INFO     | 5206s have passed since pilot start - server update state is 'RUNNING'
[2025-07-29 15:35:10] 2025-07-29 19:34:32,137 | INFO     | monitor loop #380: job 0:6746741973 is in state 'finished'
[2025-07-29 15:35:10] 2025-07-29 19:34:32,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 15:35:10] 2025-07-29 19:34:32,692 | INFO     | job 6746741973 has state=finished
[2025-07-29 15:35:10] 2025-07-29 19:34:32,693 | INFO     | preparing for final server update for job 6746741973 in state='finished'
[2025-07-29 15:35:10] 2025-07-29 19:34:32,693 | INFO     | this job has now completed (state=finished)
[2025-07-29 15:35:10] 2025-07-29 19:34:32,693 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-29 15:35:10] 2025-07-29 19:34:32,693 | INFO     | log transfer has been attempted: DONE
[2025-07-29 15:35:10] 2025-07-29 19:34:32,693 | INFO     | job 6746741973 has finished - writing final server update
[2025-07-29 15:35:10] 2025-07-29 19:34:32,694 | INFO     | total number of processed events: 400 (read)
[2025-07-29 15:35:10] 2025-07-29 19:34:32,700 | INFO     | executing command: lscpu
[2025-07-29 15:35:10] 2025-07-29 19:34:32,764 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-29 15:35:10] 2025-07-29 19:34:34,642 | INFO     | monitor loop #381: job 0:6746741973 is in state 'finished'
[2025-07-29 15:35:10] 2025-07-29 19:34:34,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 15:35:10] 2025-07-29 19:34:37,146 | INFO     | monitor loop #382: job 0:6746741973 is in state 'finished'
[2025-07-29 15:35:10] 2025-07-29 19:34:37,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 15:35:10] 2025-07-29 19:34:37,498 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-29 15:35:10] 2025-07-29 19:34:37,505 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3146.488964285715
[2025-07-29 15:35:10] 2025-07-29 19:34:37,514 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746741973/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 15:35:10] 2025-07-29 19:34:37,515 | INFO     | extracted standard info from prmon json
[2025-07-29 15:35:10] 2025-07-29 19:34:37,515 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 15:35:10] 2025-07-29 19:34:37,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 15:35:10] 2025-07-29 19:34:37,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 15:35:10] 2025-07-29 19:34:37,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 15:35:10] 2025-07-29 19:34:37,517 | INFO     | fitting pss+swap vs Time
[2025-07-29 15:35:10] 2025-07-29 19:34:37,518 | INFO     | sum of square deviations: 147127273.48717925
[2025-07-29 15:35:10] 2025-07-29 19:34:37,518 | INFO     | sum of deviations: -1064508834.8717948
[2025-07-29 15:35:10] 2025-07-29 19:34:37,518 | INFO     | mean x: 1753815146.5128205
[2025-07-29 15:35:10] 2025-07-29 19:34:37,518 | INFO     | mean y: 2385607.371794872
[2025-07-29 15:35:10] 2025-07-29 19:34:37,518 | INFO     | -- intersect: 12691750902.770653
[2025-07-29 15:35:10] 2025-07-29 19:34:37,518 | INFO     | intersect: 12691750902.770653
[2025-07-29 15:35:10] 2025-07-29 19:34:37,518 | INFO     | chi2: 0.06617326960713318
[2025-07-29 15:35:10] 2025-07-29 19:34:37,519 | INFO     | -- intersect: 12691750902.770653
[2025-07-29 15:35:10] 2025-07-29 19:34:37,519 | INFO     | current memory leak: -7.24 B/s (using 78 data points, chi2=0.07)
[2025-07-29 15:35:10] 2025-07-29 19:34:37,519 | INFO     | could have reported an average CPU frequency of 3047 MHz (6 samples)
[2025-07-29 15:35:10] 2025-07-29 19:34:37,519 | INFO     | ..............................
[2025-07-29 15:35:10] 2025-07-29 19:34:37,519 | INFO     | . Timing measurements:
[2025-07-29 15:35:10] 2025-07-29 19:34:37,519 | INFO     | . get job = 0 s
[2025-07-29 15:35:10] 2025-07-29 19:34:37,519 | INFO     | . initial setup = 2 s
[2025-07-29 15:35:10] 2025-07-29 19:34:37,519 | INFO     | . payload setup = 6 s
[2025-07-29 15:35:10] 2025-07-29 19:34:37,519 | INFO     | . stage-in = 0 s
[2025-07-29 15:35:10] 2025-07-29 19:34:37,520 | INFO     | . payload execution = 5173 s
[2025-07-29 15:35:10] 2025-07-29 19:34:37,520 | INFO     | . stage-out = 0 s
[2025-07-29 15:35:10] 2025-07-29 19:34:37,520 | INFO     | . log creation = 0 s
[2025-07-29 15:35:10] 2025-07-29 19:34:37,520 | INFO     | ..............................
[2025-07-29 15:35:10] 2025-07-29 19:34:37,601 | INFO     | 
[2025-07-29 15:35:10] 2025-07-29 19:34:37,601 | INFO     | job summary report
[2025-07-29 15:35:10] 2025-07-29 19:34:37,601 | INFO     | --------------------------------------------------
[2025-07-29 15:35:10] 2025-07-29 19:34:37,601 | INFO     | PanDA job id: 6746741973
[2025-07-29 15:35:10] 2025-07-29 19:34:37,601 | INFO     | task id: 45759704
[2025-07-29 15:35:10] 2025-07-29 19:34:37,601 | INFO     | errors: (none)
[2025-07-29 15:35:10] 2025-07-29 19:34:37,601 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | pilot state: finished 
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | transexitcode: 0
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | exeerrorcode: 0
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | exeerrordiag: 
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | exitcode: 0
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | exitmsg: OK
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | cpuconsumptiontime: 47210 s
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | nevents: 400
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | neventsw: 0
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | pid: 3868380
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | pgrp: 3868380
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | corecount: 12
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | event service: False
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | sizes: {0: 2391904, 1: 2391904, 5: 2392194, 11: 2392250, 5183: 2418514, 5185: 2427512, 5188: 2427696, 5196: 2427890}
[2025-07-29 15:35:10] 2025-07-29 19:34:37,602 | INFO     | --------------------------------------------------
[2025-07-29 15:35:10] 2025-07-29 19:34:37,603 | INFO     | 
[2025-07-29 15:35:10] 2025-07-29 19:34:37,603 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-29 15:35:10] 2025-07-29 19:34:37,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,618 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,618 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,619 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 15:35:10] 2025-07-29 19:34:37,620 | INFO     | job 6746741973 has completed (purged errors)
[2025-07-29 15:35:10] 2025-07-29 19:34:37,620 | INFO     | overall cleanup function is called
[2025-07-29 15:35:10] 2025-07-29 19:34:38,628 | INFO     | --- collectZombieJob: --- 10, [3868380]
[2025-07-29 15:35:10] 2025-07-29 19:34:38,628 | INFO     | zombie collector waiting for pid 3868380
[2025-07-29 15:35:10] 2025-07-29 19:34:38,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 15:35:10] 2025-07-29 19:34:38,628 | INFO     | collected zombie processes
[2025-07-29 15:35:10] 2025-07-29 19:34:38,628 | INFO     | will attempt to kill all subprocesses of pid=3868380
[2025-07-29 15:35:10] 2025-07-29 19:34:38,864 | INFO     | process IDs to be killed: [3868380] (in reverse order)
[2025-07-29 15:35:10] 2025-07-29 19:34:38,945 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 15:35:10] 2025-07-29 19:34:38,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 15:35:10] 2025-07-29 19:34:38,958 | INFO     | did not find any defunct processes belonging to 3868380
[2025-07-29 15:35:10] 2025-07-29 19:34:38,970 | INFO     | did not find any defunct processes belonging to 3868380
[2025-07-29 15:35:10] 2025-07-29 19:34:38,970 | INFO     | ready for new job
[2025-07-29 15:35:10] 2025-07-29 19:34:38,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 15:35:10] 2025-07-29 19:34:38,973 | INFO     | ***************************************
[2025-07-29 15:35:10] 2025-07-29 19:34:38,973 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 15:35:10] 2025-07-29 19:34:38,973 | INFO     | ***************************************
[2025-07-29 15:35:10] 2025-07-29 19:34:38,973 | INFO     | 
[2025-07-29 15:35:10] 2025-07-29 19:34:38,988 | INFO     | architecture information:
[2025-07-29 15:35:10] 2025-07-29 19:34:38,988 | INFO     | executing command: cat /etc/os-release
[2025-07-29 15:35:10] 2025-07-29 19:34:39,003 | INFO     | cat /etc/os-release:
[2025-07-29 15:35:10] NAME="CentOS Linux"
[2025-07-29 15:35:10] VERSION="7 (Core)"
[2025-07-29 15:35:10] ID="centos"
[2025-07-29 15:35:10] ID_LIKE="rhel fedora"
[2025-07-29 15:35:10] VERSION_ID="7"
[2025-07-29 15:35:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 15:35:10] ANSI_COLOR="0;31"
[2025-07-29 15:35:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 15:35:10] HOME_URL="https://www.centos.org/"
[2025-07-29 15:35:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 15:35:10] 
[2025-07-29 15:35:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 15:35:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 15:35:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 15:35:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 15:35:10] 
[2025-07-29 15:35:10] 2025-07-29 19:34:39,004 | INFO     | ***************************************
[2025-07-29 15:35:10] 2025-07-29 19:34:39,508 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-29 15:35:10] 2025-07-29 19:34:39,529 | INFO     | sufficient remaining disk space (56458477568 B)
[2025-07-29 15:35:10] 2025-07-29 19:34:39,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 15:35:10] 2025-07-29 19:34:39,529 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 15:35:10] 2025-07-29 19:34:39,530 | INFO     | update_server=False
[2025-07-29 15:35:10] 2025-07-29 19:34:39,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 15:35:10] 2025-07-29 19:34:39,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 15:35:10] 2025-07-29 19:34:39,537 | INFO     | all job control threads have been joined
[2025-07-29 15:35:10] 2025-07-29 19:34:39,651 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-29 15:35:10] 2025-07-29 19:34:39,651 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-29 15:35:10] 2025-07-29 19:34:39,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 15:35:10] 2025-07-29 19:34:39,651 | INFO     | will abort loop
[2025-07-29 15:35:10] 2025-07-29 19:34:39,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 15:35:10] 2025-07-29 19:34:40,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 15:35:10] 2025-07-29 19:34:40,282 | INFO     | all payload control threads have been joined
[2025-07-29 15:35:10] 2025-07-29 19:34:40,424 | INFO     | all data control threads have been joined
[2025-07-29 15:35:10] 2025-07-29 19:34:40,536 | INFO     | [job] retrieve thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:40,536 | INFO     | [job] queue monitor thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:40,543 | INFO     | [job] control thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:40,572 | INFO     | [payload] validate_post thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:40,655 | INFO     | [data] copytool_in thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:40,656 | INFO     | [job] job monitor thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:40,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:40,963 | INFO     | [payload] failed_post thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:41,041 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:41,155 | INFO     | [job] validate thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:41,157 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:41,267 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:41,287 | INFO     | [payload] control thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:41,429 | INFO     | [data] control thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:41,878 | INFO     | [data] copytool_out thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:44,280 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 15:35:10] 2025-07-29 19:34:45,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140323098421056)>', '<ExcThread(monitor, started 140322436781824)>']
[2025-07-29 15:35:10] 2025-07-29 19:34:50,217 | INFO     | all workflow threads have been joined
[2025-07-29 15:35:10] 2025-07-29 19:34:50,218 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 15:35:10] 2025-07-29 19:34:50,218 | INFO     | traces error code: 0
[2025-07-29 15:35:10] 2025-07-29 19:34:50,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 15:35:10] 2025-07-29 19:35:10,105 | INFO     | PID=3861769 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 15:35:10] 2025-07-29 19:35:10,105 | INFO     | .. there are 13 such processes running
[2025-07-29 15:35:10] 2025-07-29 19:35:10,106 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 15:35:10] 2025-07-29 19:35:10,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 15:35:10] 2025-07-29 19:35:10,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 15:35:10] 2025-07-29 19:35:10,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 15:35:10] 2025-07-29 19:35:10,106 | INFO     | [monitor] control thread has ended
[2025-07-29 15:35:10] 2025-07-29 19:35:10,264 [wrapper] ==== pilot stdout END ====
[2025-07-29 15:35:10] 2025-07-29 19:35:10,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 15:35:10] 2025-07-29 19:35:10,269 [wrapper] pilotpid: 3861769
[2025-07-29 15:35:10] 2025-07-29 19:35:10,271 [wrapper] Pilot exit status: 0
[2025-07-29 15:35:10] 2025-07-29 19:35:10,280 [wrapper] pandaids: 6746741973
[2025-07-29 15:35:10] 2025-07-29 19:35:10,342 [wrapper] cleanup supervisor_pilot 4089294 3861770
[2025-07-29 15:35:10] 2025-07-29 19:35:10,346 [wrapper] Test setup, not cleaning
[2025-07-29 15:35:10] 2025-07-29 19:35:10,348 [wrapper] apfmon messages muted
[2025-07-29 15:35:10] 2025-07-29 19:35:10,351 [wrapper] ==== wrapper stdout END ====
[2025-07-29 15:35:10] 2025-07-29 19:35:10,354 [wrapper] ==== wrapper stderr END ====
[2025-07-29 15:35:10]  *** Error codes and diagnostics ***
[2025-07-29 15:35:10]     "exeErrorCode": 0,
[2025-07-29 15:35:10]     "exeErrorDiag": "",
[2025-07-29 15:35:10]     "pilotErrorCode": 0,
[2025-07-29 15:35:10]     "pilotErrorDiag": "",
[2025-07-29 15:35:10]  *** Listing of results directory ***
[2025-07-29 15:35:10] total 404976
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 04:38 pilot3.tar.gz
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 04:54 queuedata.json
[2025-07-29 15:35:10] -rwx------. 1 boincer umatlas     36292 Jul 27 04:54 runpilot2-wrapper.sh
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas       100 Jul 29 14:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 15:35:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 29 14:07 run_atlas
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas       105 Jul 29 14:07 job.xml
[2025-07-29 15:35:10] -rw-r--r--. 2 boincer umatlas 238520541 Jul 29 14:07 EVNT.45759700._000001.pool.root.1
[2025-07-29 15:35:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 29 14:07 start_atlas.sh
[2025-07-29 15:35:10] drwxrwx--x. 2 boincer umatlas      4096 Jul 29 14:07 shared
[2025-07-29 15:35:10] -rw-r--r--. 2 boincer umatlas    542880 Jul 29 14:07 input.tar.gz
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas         0 Jul 29 14:07 boinc_lockfile
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas      2566 Jul 29 14:07 pandaJob.out
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas    977316 Jul 29 14:07 agis_schedconf.cvmfs.json
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas   1589827 Jul 29 14:07 agis_ddmendpoints.agis.ALL.json
[2025-07-29 15:35:10] drwx------. 4 boincer umatlas      4096 Jul 29 14:07 pilot3
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas      6839 Jul 29 15:27 init_data.xml
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas 170555904 Jul 29 15:33 HITS.45759704._000007.pool.root.1
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas       529 Jul 29 15:34 boinc_task_state.xml
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas      1043 Jul 29 15:34 memory_monitor_summary.json
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas        95 Jul 29 15:34 pilot_heartbeat.json
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas    365414 Jul 29 15:34 log.45759704._000007.job.log.tgz.1
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas      7814 Jul 29 15:34 heartbeat.json
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas      8192 Jul 29 15:35 boinc_mmap_file
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas        27 Jul 29 15:35 wrapper_checkpoint.txt
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas       823 Jul 29 15:35 pilotlog.txt
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas    508173 Jul 29 15:35 log.45759704._000007.job.log.1
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas       357 Jul 29 15:35 output.list
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas       620 Jul 29 15:35 runtime_log
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas    890880 Jul 29 15:35 result.tar.gz
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas       655 Jul 29 15:35 URkMDmBKC07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsnULDmCJaQHn.diag
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas      8667 Jul 29 15:35 runtime_log.err
[2025-07-29 15:35:10] -rw-r--r--. 1 boincer umatlas     22359 Jul 29 15:35 stderr.txt
[2025-07-29 15:35:10] HITS file was successfully produced:
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas 170555904 Jul 29 15:33 shared/HITS.pool.root.1
[2025-07-29 15:35:10]  *** Contents of shared directory: ***
[2025-07-29 15:35:10] total 400916
[2025-07-29 15:35:10] -rw-r--r--. 2 boincer umatlas 238520541 Jul 29 14:07 ATLAS.root_0
[2025-07-29 15:35:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 29 14:07 start_atlas.sh
[2025-07-29 15:35:10] -rw-r--r--. 2 boincer umatlas    542880 Jul 29 14:07 input.tar.gz
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas 170555904 Jul 29 15:33 HITS.pool.root.1
[2025-07-29 15:35:10] -rw-------. 1 boincer umatlas    890880 Jul 29 15:35 result.tar.gz
15:35:12 (3858188): run_atlas exited; CPU time 47262.585217
15:35:12 (3858188): called boinc_finish(0)

</stderr_txt>
]]>

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