Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:23:08 (4025520): wrapper (7.7.26015): starting
03:23:08 (4025520): wrapper: running run_atlas (--nthreads 8)
[2025-07-29 03:23:08] Arguments: --nthreads 8
[2025-07-29 03:23:08] Threads: 8
[2025-07-29 03:23:08] Checking for CVMFS
[2025-07-29 03:23:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 03:23:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 03:23:08] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 03:23:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 03:23:09] 2.13.1.0 1602499 15503 233692 148879 1 22 38835647 40960000 19687 16776704 0 89475059 99.724 94725651 34467 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-29 03:23:09] CVMFS is ok
[2025-07-29 03:23:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 03:23:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 03:23:09] Further information can be found at the LHC@home message board.
[2025-07-29 03:23:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 03:23:09] Checking for apptainer binary...
[2025-07-29 03:23:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-29 03:23:09] Running /usr/bin/apptainer --version
[2025-07-29 03:23:09] apptainer version 1.4.1-1.el9
[2025-07-29 03:23:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 03:23:09] c-212-17.aglt2.org
[2025-07-29 03:23:09] apptainer works
[2025-07-29 03:23:09] Set ATHENA_PROC_NUMBER=8
[2025-07-29 03:23:09] Set ATHENA_CORE_NUMBER=8
[2025-07-29 03:23:09] Starting ATLAS job with PandaID=6749430732
[2025-07-29 03:23:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 05:37:22]  *** The last 200 lines of the pilot log: ***
[2025-07-29 05:37:22] 2025-07-29 09:36:44,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 05:37:22] 2025-07-29 09:36:47,458 | INFO     | monitor loop #557: job 0:6749430732 is in state 'finished'
[2025-07-29 05:37:22] 2025-07-29 09:36:47,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 05:37:22] 2025-07-29 09:36:47,918 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-29 05:37:22] 2025-07-29 09:36:47,996 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3417.1710937500015
[2025-07-29 05:37:22] 2025-07-29 09:36:48,070 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6749430732/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 05:37:22] 2025-07-29 09:36:48,070 | INFO     | extracted standard info from prmon json
[2025-07-29 05:37:22] 2025-07-29 09:36:48,071 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 05:37:22] 2025-07-29 09:36:48,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 05:37:22] 2025-07-29 09:36:48,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 05:37:22] 2025-07-29 09:36:48,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 05:37:22] 2025-07-29 09:36:48,073 | INFO     | fitting pss+swap vs Time
[2025-07-29 05:37:22] 2025-07-29 09:36:48,074 | INFO     | sum of square deviations: 681238834.2769207
[2025-07-29 05:37:22] 2025-07-29 09:36:48,075 | INFO     | sum of deviations: -21295006077.246155
[2025-07-29 05:37:22] 2025-07-29 09:36:48,075 | INFO     | mean x: 1753777791.6307693
[2025-07-29 05:37:22] 2025-07-29 09:36:48,075 | INFO     | mean y: 2654685.6615384617
[2025-07-29 05:37:22] 2025-07-29 09:36:48,075 | INFO     | -- intersect: 54824410069.81701
[2025-07-29 05:37:22] 2025-07-29 09:36:48,075 | INFO     | intersect: 54824410069.81701
[2025-07-29 05:37:22] 2025-07-29 09:36:48,075 | INFO     | chi2: 1.9773402866498793
[2025-07-29 05:37:22] 2025-07-29 09:36:48,076 | INFO     | sum of square deviations: 605600570.4319985
[2025-07-29 05:37:22] 2025-07-29 09:36:48,076 | INFO     | sum of deviations: -19200434822.695995
[2025-07-29 05:37:22] 2025-07-29 09:36:48,076 | INFO     | mean x: 1753777639.112
[2025-07-29 05:37:22] 2025-07-29 09:36:48,076 | INFO     | mean y: 2658911.264
[2025-07-29 05:37:22] 2025-07-29 09:36:48,076 | INFO     | -- intersect: 55605798831.11437
[2025-07-29 05:37:22] 2025-07-29 09:36:48,076 | INFO     | intersect: 55605798831.11437
[2025-07-29 05:37:22] 2025-07-29 09:36:48,076 | INFO     | chi2: 1.975710062864194
[2025-07-29 05:37:22] 2025-07-29 09:36:48,076 | INFO     | current chi2=1.975710062864194 (change=0.08244528251873899 %)
[2025-07-29 05:37:22] 2025-07-29 09:36:48,077 | INFO     | right removable region: 124
[2025-07-29 05:37:22] 2025-07-29 09:36:48,077 | INFO     | sum of square deviations: 605613626.6880002
[2025-07-29 05:37:22] 2025-07-29 09:36:48,077 | INFO     | sum of deviations: -43227535269.56001
[2025-07-29 05:37:22] 2025-07-29 09:36:48,077 | INFO     | mean x: 1753777944.136
[2025-07-29 05:37:22] 2025-07-29 09:36:48,077 | INFO     | mean y: 2698113.68
[2025-07-29 05:37:22] 2025-07-29 09:36:48,077 | INFO     | -- intersect: 125183992910.027
[2025-07-29 05:37:22] 2025-07-29 09:36:48,077 | INFO     | intersect: 125183992910.027
[2025-07-29 05:37:22] 2025-07-29 09:36:48,078 | INFO     | chi2: 0.21155307084427102
[2025-07-29 05:37:22] 2025-07-29 09:36:48,078 | INFO     | current chi2=0.21155307084427102 (change=89.3011297917418 %)
[2025-07-29 05:37:22] 2025-07-29 09:36:48,078 | INFO     | sum of square deviations: 535810227.8666659
[2025-07-29 05:37:22] 2025-07-29 09:36:48,078 | INFO     | sum of deviations: -40133173664.36664
[2025-07-29 05:37:22] 2025-07-29 09:36:48,078 | INFO     | mean x: 1753778096.6333334
[2025-07-29 05:37:22] 2025-07-29 09:36:48,078 | INFO     | mean y: 2691308.2416666667
[2025-07-29 05:37:22] 2025-07-29 09:36:48,078 | INFO     | -- intersect: 131363903282.83441
[2025-07-29 05:37:22] 2025-07-29 09:36:48,079 | INFO     | intersect: 131363903282.83441
[2025-07-29 05:37:22] 2025-07-29 09:36:48,079 | INFO     | chi2: 0.20398001276913014
[2025-07-29 05:37:22] 2025-07-29 09:36:48,079 | INFO     | current chi2=0.20398001276913014 (change=3.5797438651767837 %)
[2025-07-29 05:37:22] 2025-07-29 09:36:48,079 | INFO     | left removable region: 20
[2025-07-29 05:37:22] 2025-07-29 09:36:48,079 | INFO     | sum of square deviations: 348768914.375
[2025-07-29 05:37:22] 2025-07-29 09:36:48,080 | INFO     | sum of deviations: -28637019503.874992
[2025-07-29 05:37:22] 2025-07-29 09:36:48,080 | INFO     | mean x: 1753778218.625
[2025-07-29 05:37:22] 2025-07-29 09:36:48,080 | INFO     | mean y: 2675617.105769231
[2025-07-29 05:37:22] 2025-07-29 09:36:48,080 | INFO     | -- intersect: 144003413590.6598
[2025-07-29 05:37:22] 2025-07-29 09:36:48,080 | INFO     | intersect: 144003413590.6598
[2025-07-29 05:37:22] 2025-07-29 09:36:48,080 | INFO     | chi2: 0.1891474250180777
[2025-07-29 05:37:22] 2025-07-29 09:36:48,080 | INFO     | -- intersect: 144003413590.6598
[2025-07-29 05:37:22] 2025-07-29 09:36:48,080 | INFO     | current memory leak: -82.11 B/s (using 104 data points, chi2=0.19)
[2025-07-29 05:37:22] 2025-07-29 09:36:48,081 | INFO     | could have reported an average CPU frequency of 3225 MHz (8 samples)
[2025-07-29 05:37:22] 2025-07-29 09:36:48,081 | INFO     | ..............................
[2025-07-29 05:37:22] 2025-07-29 09:36:48,081 | INFO     | . Timing measurements:
[2025-07-29 05:37:22] 2025-07-29 09:36:48,081 | INFO     | . get job = 0 s
[2025-07-29 05:37:22] 2025-07-29 09:36:48,081 | INFO     | . initial setup = 3 s
[2025-07-29 05:37:22] 2025-07-29 09:36:48,081 | INFO     | . payload setup = 14 s
[2025-07-29 05:37:22] 2025-07-29 09:36:48,081 | INFO     | . stage-in = 0 s
[2025-07-29 05:37:22] 2025-07-29 09:36:48,082 | INFO     | . payload execution = 7935 s
[2025-07-29 05:37:22] 2025-07-29 09:36:48,082 | INFO     | . stage-out = 1 s
[2025-07-29 05:37:22] 2025-07-29 09:36:48,082 | INFO     | . log creation = 0 s
[2025-07-29 05:37:22] 2025-07-29 09:36:48,082 | INFO     | ..............................
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | 
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | job summary report
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | --------------------------------------------------
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | PanDA job id: 6749430732
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | task id: 45743349
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | errors: (none)
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | pilot state: finished 
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | transexitcode: 0
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | exeerrorcode: 0
[2025-07-29 05:37:22] 2025-07-29 09:36:48,541 | INFO     | exeerrordiag: 
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | exitcode: 0
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | exitmsg: OK
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | cpuconsumptiontime: 37114 s
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | nevents: 400
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | neventsw: 0
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | pid: 4049221
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | pgrp: 4049221
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | corecount: 8
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | event service: False
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | sizes: {0: 2391631, 1: 2391886, 2: 2391886, 12: 2392204, 7954: 2419865, 7955: 2428863, 7959: 2429047, 7975: 2429241}
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | --------------------------------------------------
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | 
[2025-07-29 05:37:22] 2025-07-29 09:36:48,542 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-29 05:37:22] 2025-07-29 09:36:48,650 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,651 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 05:37:22] 2025-07-29 09:36:48,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 05:37:22] 2025-07-29 09:36:48,652 | INFO     | job 6749430732 has completed (purged errors)
[2025-07-29 05:37:22] 2025-07-29 09:36:48,652 | INFO     | overall cleanup function is called
[2025-07-29 05:37:22] 2025-07-29 09:36:49,701 | INFO     | --- collectZombieJob: --- 10, [4049221]
[2025-07-29 05:37:22] 2025-07-29 09:36:49,702 | INFO     | zombie collector waiting for pid 4049221
[2025-07-29 05:37:22] 2025-07-29 09:36:49,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 05:37:22] 2025-07-29 09:36:49,702 | INFO     | collected zombie processes
[2025-07-29 05:37:22] 2025-07-29 09:36:49,702 | INFO     | will attempt to kill all subprocesses of pid=4049221
[2025-07-29 05:37:22] 2025-07-29 09:36:50,383 | INFO     | process IDs to be killed: [4049221] (in reverse order)
[2025-07-29 05:37:22] 2025-07-29 09:36:50,583 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 05:37:22] 2025-07-29 09:36:50,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 05:37:22] 2025-07-29 09:36:50,601 | INFO     | did not find any defunct processes belonging to 4049221
[2025-07-29 05:37:22] 2025-07-29 09:36:50,618 | INFO     | did not find any defunct processes belonging to 4049221
[2025-07-29 05:37:22] 2025-07-29 09:36:50,619 | INFO     | ready for new job
[2025-07-29 05:37:22] 2025-07-29 09:36:50,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 05:37:22] 2025-07-29 09:36:50,622 | INFO     | ***************************************
[2025-07-29 05:37:22] 2025-07-29 09:36:50,623 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 05:37:22] 2025-07-29 09:36:50,623 | INFO     | ***************************************
[2025-07-29 05:37:22] 2025-07-29 09:36:50,623 | INFO     | 
[2025-07-29 05:37:22] 2025-07-29 09:36:50,628 | INFO     | architecture information:
[2025-07-29 05:37:22] 2025-07-29 09:36:50,635 | INFO     | executing command: cat /etc/os-release
[2025-07-29 05:37:22] 2025-07-29 09:36:50,670 | INFO     | cat /etc/os-release:
[2025-07-29 05:37:22] NAME="CentOS Linux"
[2025-07-29 05:37:22] VERSION="7 (Core)"
[2025-07-29 05:37:22] ID="centos"
[2025-07-29 05:37:22] ID_LIKE="rhel fedora"
[2025-07-29 05:37:22] VERSION_ID="7"
[2025-07-29 05:37:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 05:37:22] ANSI_COLOR="0;31"
[2025-07-29 05:37:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 05:37:22] HOME_URL="https://www.centos.org/"
[2025-07-29 05:37:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 05:37:22] 
[2025-07-29 05:37:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 05:37:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 05:37:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 05:37:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 05:37:22] 
[2025-07-29 05:37:22] 2025-07-29 09:36:50,670 | INFO     | ***************************************
[2025-07-29 05:37:22] 2025-07-29 09:36:51,174 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-29 05:37:22] 2025-07-29 09:36:51,229 | INFO     | sufficient remaining disk space (129001062400 B)
[2025-07-29 05:37:22] 2025-07-29 09:36:51,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 05:37:22] 2025-07-29 09:36:51,229 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 05:37:22] 2025-07-29 09:36:51,230 | INFO     | update_server=False
[2025-07-29 05:37:22] 2025-07-29 09:36:51,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 05:37:22] 2025-07-29 09:36:51,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 05:37:22] 2025-07-29 09:36:51,230 | INFO     | aborting loop
[2025-07-29 05:37:22] 2025-07-29 09:36:51,230 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 05:37:22] 2025-07-29 09:36:51,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 05:37:22] 2025-07-29 09:36:51,656 | INFO     | all job control threads have been joined
[2025-07-29 05:37:22] 2025-07-29 09:36:52,236 | INFO     | [job] retrieve thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:52,236 | INFO     | [job] job monitor thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:52,326 | INFO     | all data control threads have been joined
[2025-07-29 05:37:22] 2025-07-29 09:36:52,354 | INFO     | [data] copytool_in thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:52,636 | INFO     | all payload control threads have been joined
[2025-07-29 05:37:22] 2025-07-29 09:36:52,663 | INFO     | [job] control thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:52,680 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:53,324 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:53,332 | INFO     | [data] control thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:53,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 05:37:22] 2025-07-29 09:36:53,437 | INFO     | [data] copytool_out thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:53,443 | INFO     | [payload] failed_post thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:53,627 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:53,644 | INFO     | [payload] control thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:53,650 | INFO     | [job] validate thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:53,830 | INFO     | [payload] validate_post thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:54,371 | INFO     | [job] queue monitor thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:36:55,239 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:37:01,650 | INFO     | job.realtimelogging is not enabled
[2025-07-29 05:37:22] 2025-07-29 09:37:02,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 05:37:22] 2025-07-29 09:37:03,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139955483211584)>', '<ExcThread(monitor, started 139955210786560)>']
[2025-07-29 05:37:22] 2025-07-29 09:37:08,441 | INFO     | all workflow threads have been joined
[2025-07-29 05:37:22] 2025-07-29 09:37:08,465 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 05:37:22] 2025-07-29 09:37:08,465 | INFO     | traces error code: 0
[2025-07-29 05:37:22] 2025-07-29 09:37:08,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 05:37:22] 2025-07-29 09:37:22,277 | INFO     | PID=4031221 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 05:37:22] 2025-07-29 09:37:22,278 | INFO     | .. there are 15 such processes running
[2025-07-29 05:37:22] 2025-07-29 09:37:22,279 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 05:37:22] 2025-07-29 09:37:22,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 05:37:22] 2025-07-29 09:37:22,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 05:37:22] 2025-07-29 09:37:22,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 05:37:22] 2025-07-29 09:37:22,279 | INFO     | [monitor] control thread has ended
[2025-07-29 05:37:22] 2025-07-29 09:37:22,413 [wrapper] ==== pilot stdout END ====
[2025-07-29 05:37:22] 2025-07-29 09:37:22,417 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 05:37:22] 2025-07-29 09:37:22,420 [wrapper] pilotpid: 4031221
[2025-07-29 05:37:22] 2025-07-29 09:37:22,423 [wrapper] Pilot exit status: 0
[2025-07-29 05:37:22] 2025-07-29 09:37:22,456 [wrapper] pandaids: 6749430732
[2025-07-29 05:37:22] 2025-07-29 09:37:22,548 [wrapper] cleanup supervisor_pilot 1043167 4031222
[2025-07-29 05:37:22] 2025-07-29 09:37:22,557 [wrapper] Test setup, not cleaning
[2025-07-29 05:37:22] 2025-07-29 09:37:22,596 [wrapper] apfmon messages muted
[2025-07-29 05:37:22] 2025-07-29 09:37:22,650 [wrapper] ==== wrapper stdout END ====
[2025-07-29 05:37:22] 2025-07-29 09:37:22,684 [wrapper] ==== wrapper stderr END ====
[2025-07-29 05:37:22]  *** Error codes and diagnostics ***
[2025-07-29 05:37:22]     "exeErrorCode": 0,
[2025-07-29 05:37:22]     "exeErrorDiag": "",
[2025-07-29 05:37:22]     "pilotErrorCode": 0,
[2025-07-29 05:37:22]     "pilotErrorDiag": "",
[2025-07-29 05:37:22]  *** Listing of results directory ***
[2025-07-29 05:37:22] total 434880
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 29 03:06 pilot3.tar.gz
[2025-07-29 05:37:22] -rwx------. 1 boincer umatlas     36292 Jul 29 03:22 runpilot2-wrapper.sh
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 29 03:22 queuedata.json
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas       100 Jul 29 03:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 05:37:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 29 03:23 run_atlas
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas       105 Jul 29 03:23 job.xml
[2025-07-29 05:37:22] -rw-r--r--. 2 boincer umatlas 228690529 Jul 29 03:23 EVNT.45743347._002666.pool.root.1
[2025-07-29 05:37:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 29 03:23 start_atlas.sh
[2025-07-29 05:37:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 29 03:23 shared
[2025-07-29 05:37:22] -rw-r--r--. 2 boincer umatlas    542892 Jul 29 03:23 input.tar.gz
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas         0 Jul 29 03:23 boinc_lockfile
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas      2562 Jul 29 03:23 pandaJob.out
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas    977316 Jul 29 03:23 agis_schedconf.cvmfs.json
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas   1589827 Jul 29 03:23 agis_ddmendpoints.agis.ALL.json
[2025-07-29 05:37:22] drwx------. 4 boincer umatlas      4096 Jul 29 03:23 pilot3
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas 210582116 Jul 29 05:35 HITS.45743349._056593.pool.root.1
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas       529 Jul 29 05:35 boinc_task_state.xml
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas      6943 Jul 29 05:36 init_data.xml
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas      1035 Jul 29 05:36 memory_monitor_summary.json
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas    350960 Jul 29 05:36 log.45743349._056593.job.log.tgz.1
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas      7785 Jul 29 05:36 heartbeat.json
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas        27 Jul 29 05:37 wrapper_checkpoint.txt
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 29 05:37 boinc_mmap_file
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas       823 Jul 29 05:37 pilotlog.txt
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas        95 Jul 29 05:37 pilot_heartbeat.json
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas    734522 Jul 29 05:37 log.45743349._056593.job.log.1
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas       357 Jul 29 05:37 output.list
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas       620 Jul 29 05:37 runtime_log
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas   1105920 Jul 29 05:37 result.tar.gz
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas       654 Jul 29 05:37 VqfKDmoqt07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjkWLDmeVOTsm.diag
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas      8660 Jul 29 05:37 runtime_log.err
[2025-07-29 05:37:22] -rw-r--r--. 1 boincer umatlas     21191 Jul 29 05:37 stderr.txt
[2025-07-29 05:37:22] HITS file was successfully produced:
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas 210582116 Jul 29 05:35 shared/HITS.pool.root.1
[2025-07-29 05:37:22]  *** Contents of shared directory: ***
[2025-07-29 05:37:22] total 430616
[2025-07-29 05:37:22] -rw-r--r--. 2 boincer umatlas 228690529 Jul 29 03:23 ATLAS.root_0
[2025-07-29 05:37:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 29 03:23 start_atlas.sh
[2025-07-29 05:37:22] -rw-r--r--. 2 boincer umatlas    542892 Jul 29 03:23 input.tar.gz
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas 210582116 Jul 29 05:35 HITS.pool.root.1
[2025-07-29 05:37:22] -rw-------. 1 boincer umatlas   1105920 Jul 29 05:37 result.tar.gz
05:37:24 (4025520): run_atlas exited; CPU time 37260.213014
05:37:24 (4025520): called boinc_finish(0)

</stderr_txt>
]]>

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