Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
12:34:33 (1937704): wrapper (7.7.26015): starting
12:34:33 (1937704): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 12:34:33] Arguments: --nthreads 4
[2025-07-29 12:34:33] Threads: 4
[2025-07-29 12:34:33] Checking for CVMFS
[2025-07-29 12:34:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 12:34:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 12:34:38] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 12:34:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 12:34:38] 2.13.0.0 1937910 0 27860 148884 3 1 3138515 4096000 0 130560 0 0 0.000 1291 584 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-29 12:34:38] CVMFS is ok
[2025-07-29 12:34:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 12:34:38] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-29 12:34:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-29 12:34:38] Further information can be found at the LHC@home message board.
[2025-07-29 12:34:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 12:34:38] Checking for apptainer binary...
[2025-07-29 12:34:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-29 12:34:38] Running /usr/bin/apptainer --version
[2025-07-29 12:34:38] apptainer version 1.2.3
[2025-07-29 12:34:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 12:34:38] Ryzen-7-7700-Zen4-Deb12
[2025-07-29 12:34:38] apptainer works
[2025-07-29 12:34:38] Set ATHENA_PROC_NUMBER=4
[2025-07-29 12:34:38] Set ATHENA_CORE_NUMBER=4
[2025-07-29 12:34:38] Starting ATLAS job with PandaID=6745227193
[2025-07-29 12:34:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 14:01:53]  *** The last 200 lines of the pilot log: ***
[2025-07-29 14:01:53]  protocol_id=None
[2025-07-29 14:01:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-29 14:01:53]  replicas=None
[2025-07-29 14:01:53]  scope=mc23_13p6TeV
[2025-07-29 14:01:53]  status=None
[2025-07-29 14:01:53]  status_code=0
[2025-07-29 14:01:53]  storage_token=
[2025-07-29 14:01:53]  surl=/var/lib/boinc-client/slots/13/PanDA_Pilot-6745227193/log.45743349._038196.job.log.tgz.1
[2025-07-29 14:01:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/d9/log.45743349._038196.job.log.tgz.1
[2025-07-29 14:01:53]  workdir=None
[2025-07-29 14:01:53] ]
[2025-07-29 14:01:53] 2025-07-29 12:01:10,892 | INFO     | transferring file log.45743349._038196.job.log.tgz.1 from /var/lib/boinc-client/slots/13/PanDA_Pilot-6745227193/log.45743349._038196.job.log.tgz.1 to /var/lib/boin
[2025-07-29 14:01:53] 2025-07-29 12:01:10,892 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/13/PanDA_Pilot-6745227193/log.45743349._038196.job.log.tgz.1 /var/lib/boinc-client/slots/13/log.4574
[2025-07-29 14:01:53] 2025-07-29 12:01:10,930 | INFO     | adding to output.list: log.45743349._038196.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/d9/log.45743349._038196.job.log.tg
[2025-07-29 14:01:53] 2025-07-29 12:01:10,930 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-29 14:01:53] 2025-07-29 12:01:10,930 | INFO     | summary of transferred files:
[2025-07-29 14:01:53] 2025-07-29 12:01:10,930 | INFO     |  -- lfn=log.45743349._038196.job.log.tgz.1, status_code=0, status=transferred
[2025-07-29 14:01:53] 2025-07-29 12:01:10,930 | INFO     | stage-out finished correctly
[2025-07-29 14:01:53] 2025-07-29 12:01:11,286 | INFO     | monitor loop #397: job 0:6745227193 is in state 'finished'
[2025-07-29 14:01:53] 2025-07-29 12:01:11,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 14:01:53] 2025-07-29 12:01:13,569 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-29 14:01:53] 2025-07-29 12:01:13,593 | INFO     | job 6745227193 has state=finished
[2025-07-29 14:01:53] 2025-07-29 12:01:13,593 | INFO     | preparing for final server update for job 6745227193 in state='finished'
[2025-07-29 14:01:53] 2025-07-29 12:01:13,593 | INFO     | this job has now completed (state=finished)
[2025-07-29 14:01:53] 2025-07-29 12:01:13,593 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-29 14:01:53] 2025-07-29 12:01:13,593 | INFO     | log transfer has been attempted: DONE
[2025-07-29 14:01:53] 2025-07-29 12:01:13,593 | INFO     | job 6745227193 has finished - writing final server update
[2025-07-29 14:01:53] 2025-07-29 12:01:13,593 | INFO     | total number of processed events: 400 (read)
[2025-07-29 14:01:53] 2025-07-29 12:01:13,594 | INFO     | executing command: lscpu
[2025-07-29 14:01:53] 2025-07-29 12:01:13,611 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-29 14:01:53] 2025-07-29 12:01:13,789 | INFO     | monitor loop #398: job 0:6745227193 is in state 'finished'
[2025-07-29 14:01:53] 2025-07-29 12:01:13,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 14:01:53] 2025-07-29 12:01:13,899 | INFO     | 5186s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-29 14:01:53] 2025-07-29 12:01:16,291 | INFO     | monitor loop #399: job 0:6745227193 is in state 'finished'
[2025-07-29 14:01:53] 2025-07-29 12:01:16,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 14:01:53] 2025-07-29 12:01:18,794 | INFO     | monitor loop #400: job 0:6745227193 is in state 'finished'
[2025-07-29 14:01:53] 2025-07-29 12:01:18,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 14:01:53] 2025-07-29 12:01:20,729 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-29 14:01:53] 2025-07-29 12:01:20,730 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3318.7053125000007
[2025-07-29 14:01:53] 2025-07-29 12:01:20,732 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-6745227193/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 14:01:53] 2025-07-29 12:01:20,732 | INFO     | extracted standard info from prmon json
[2025-07-29 14:01:53] 2025-07-29 12:01:20,732 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 14:01:53] 2025-07-29 12:01:20,732 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 14:01:53] 2025-07-29 12:01:20,733 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 14:01:53] 2025-07-29 12:01:20,733 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 14:01:53] 2025-07-29 12:01:20,733 | INFO     | fitting pss+swap vs Time
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | sum of square deviations: 147126479.5
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | sum of deviations: -16146467590.0
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | mean x: 1753787959.5
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | mean y: 2677861.0256410255
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | -- intersect: 192472996895.60147
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | intersect: 192472996895.60147
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | chi2: 0.17146914045654024
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | -- intersect: 192472996895.60147
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | current memory leak: -109.75 B/s (using 78 data points, chi2=0.17)
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | could have reported an average CPU frequency of 4485 MHz (6 samples)
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | ..............................
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | . Timing measurements:
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | . get job = 0 s
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | . initial setup = 1 s
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | . payload setup = 2 s
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | . stage-in = 0 s
[2025-07-29 14:01:53] 2025-07-29 12:01:20,734 | INFO     | . payload execution = 5163 s
[2025-07-29 14:01:53] 2025-07-29 12:01:20,735 | INFO     | . stage-out = 0 s
[2025-07-29 14:01:53] 2025-07-29 12:01:20,735 | INFO     | . log creation = 0 s
[2025-07-29 14:01:53] 2025-07-29 12:01:20,735 | INFO     | ..............................
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | 
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | job summary report
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | --------------------------------------------------
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | PanDA job id: 6745227193
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | task id: 45743349
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | errors: (none)
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | pilot state: finished 
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | transexitcode: 0
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | exeerrorcode: 0
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | exeerrordiag: 
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | exitcode: 0
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | exitmsg: OK
[2025-07-29 14:01:53] 2025-07-29 12:01:20,781 | INFO     | cpuconsumptiontime: 19858 s
[2025-07-29 14:01:53] 2025-07-29 12:01:20,782 | INFO     | nevents: 400
[2025-07-29 14:01:53] 2025-07-29 12:01:20,782 | INFO     | neventsw: 0
[2025-07-29 14:01:53] 2025-07-29 12:01:20,782 | INFO     | pid: 1948471
[2025-07-29 14:01:53] 2025-07-29 12:01:20,782 | INFO     | pgrp: 1948471
[2025-07-29 14:01:53] 2025-07-29 12:01:20,782 | INFO     | corecount: 4
[2025-07-29 14:01:53] 2025-07-29 12:01:20,782 | INFO     | event service: False
[2025-07-29 14:01:53] 2025-07-29 12:01:20,782 | INFO     | sizes: {0: 2391917, 2: 2392179, 11: 2392207, 5169: 2427824, 5172: 2427824, 5179: 2428018}
[2025-07-29 14:01:53] 2025-07-29 12:01:20,782 | INFO     | --------------------------------------------------
[2025-07-29 14:01:53] 2025-07-29 12:01:20,782 | INFO     | 
[2025-07-29 14:01:53] 2025-07-29 12:01:20,782 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 14:01:53] 2025-07-29 12:01:20,791 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,792 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 14:01:53] 2025-07-29 12:01:20,792 | INFO     | job 6745227193 has completed (purged errors)
[2025-07-29 14:01:53] 2025-07-29 12:01:20,792 | INFO     | overall cleanup function is called
[2025-07-29 14:01:53] 2025-07-29 12:01:21,798 | INFO     | --- collectZombieJob: --- 10, [1948471]
[2025-07-29 14:01:53] 2025-07-29 12:01:21,798 | INFO     | zombie collector waiting for pid 1948471
[2025-07-29 14:01:53] 2025-07-29 12:01:21,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 14:01:53] 2025-07-29 12:01:21,798 | INFO     | collected zombie processes
[2025-07-29 14:01:53] 2025-07-29 12:01:21,799 | INFO     | will attempt to kill all subprocesses of pid=1948471
[2025-07-29 14:01:53] 2025-07-29 12:01:21,823 | INFO     | process IDs to be killed: [1948471] (in reverse order)
[2025-07-29 14:01:53] 2025-07-29 12:01:21,845 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 14:01:53] 2025-07-29 12:01:21,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 14:01:53] 2025-07-29 12:01:21,847 | INFO     | did not find any defunct processes belonging to 1948471
[2025-07-29 14:01:53] 2025-07-29 12:01:21,848 | INFO     | did not find any defunct processes belonging to 1948471
[2025-07-29 14:01:53] 2025-07-29 12:01:21,848 | INFO     | ready for new job
[2025-07-29 14:01:53] 2025-07-29 12:01:21,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 14:01:53] 2025-07-29 12:01:21,849 | INFO     | ***************************************
[2025-07-29 14:01:53] 2025-07-29 12:01:21,849 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 14:01:53] 2025-07-29 12:01:21,849 | INFO     | ***************************************
[2025-07-29 14:01:53] 2025-07-29 12:01:21,849 | INFO     | 
[2025-07-29 14:01:53] 2025-07-29 12:01:21,849 | INFO     | architecture information:
[2025-07-29 14:01:53] 2025-07-29 12:01:21,849 | INFO     | executing command: cat /etc/os-release
[2025-07-29 14:01:53] 2025-07-29 12:01:21,858 | INFO     | cat /etc/os-release:
[2025-07-29 14:01:53] NAME="CentOS Linux"
[2025-07-29 14:01:53] VERSION="7 (Core)"
[2025-07-29 14:01:53] ID="centos"
[2025-07-29 14:01:53] ID_LIKE="rhel fedora"
[2025-07-29 14:01:53] VERSION_ID="7"
[2025-07-29 14:01:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 14:01:53] ANSI_COLOR="0;31"
[2025-07-29 14:01:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 14:01:53] HOME_URL="https://www.centos.org/"
[2025-07-29 14:01:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 14:01:53] 
[2025-07-29 14:01:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 14:01:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 14:01:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 14:01:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 14:01:53] 
[2025-07-29 14:01:53] 2025-07-29 12:01:21,858 | INFO     | ***************************************
[2025-07-29 14:01:53] 2025-07-29 12:01:22,359 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2025-07-29 14:01:53] 2025-07-29 12:01:22,371 | INFO     | sufficient remaining disk space (886707322880 B)
[2025-07-29 14:01:53] 2025-07-29 12:01:22,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 14:01:53] 2025-07-29 12:01:22,371 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 14:01:53] 2025-07-29 12:01:22,371 | INFO     | update_server=False
[2025-07-29 14:01:53] 2025-07-29 12:01:22,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 14:01:53] 2025-07-29 12:01:22,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 14:01:53] 2025-07-29 12:01:22,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 14:01:53] 2025-07-29 12:01:22,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 14:01:53] 2025-07-29 12:01:22,371 | INFO     | aborting loop
[2025-07-29 14:01:53] 2025-07-29 12:01:23,286 | INFO     | all data control threads have been joined
[2025-07-29 14:01:53] 2025-07-29 12:01:23,376 | INFO     | [job] retrieve thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:23,376 | INFO     | [job] queue monitor thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:23,376 | INFO     | [job] job monitor thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:23,507 | INFO     | [job] validate thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:23,511 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:23,599 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:23,652 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:23,737 | INFO     | all job control threads have been joined
[2025-07-29 14:01:53] 2025-07-29 12:01:23,838 | INFO     | all payload control threads have been joined
[2025-07-29 14:01:53] 2025-07-29 12:01:24,031 | INFO     | [data] copytool_in thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:24,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 14:01:53] 2025-07-29 12:01:24,291 | INFO     | [data] control thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:24,376 | INFO     | [data] copytool_out thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:24,484 | INFO     | [payload] validate_post thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:24,520 | INFO     | [payload] failed_post thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:24,743 | INFO     | [job] control thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:24,844 | INFO     | [payload] control thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:28,107 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:33,243 | INFO     | job.realtimelogging is not enabled
[2025-07-29 14:01:53] 2025-07-29 12:01:34,249 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 14:01:53] 2025-07-29 12:01:35,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140346129274688)>', '<ExcThread(monitor, started 140345855678208)>']
[2025-07-29 14:01:53] 2025-07-29 12:01:40,711 | INFO     | all workflow threads have been joined
[2025-07-29 14:01:53] 2025-07-29 12:01:40,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 14:01:53] 2025-07-29 12:01:40,711 | INFO     | traces error code: 0
[2025-07-29 14:01:53] 2025-07-29 12:01:40,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 14:01:53] 2025-07-29 12:01:53,014 | INFO     | PID=1941954 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 14:01:53] 2025-07-29 12:01:53,014 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 14:01:53] 2025-07-29 12:01:53,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 14:01:53] 2025-07-29 12:01:53,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 14:01:53] 2025-07-29 12:01:53,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 14:01:53] 2025-07-29 12:01:53,014 | INFO     | [monitor] control thread has ended
[2025-07-29 14:01:53] 2025-07-29 12:01:53,062 [wrapper] ==== pilot stdout END ====
[2025-07-29 14:01:53] 2025-07-29 12:01:53,064 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 14:01:53] 2025-07-29 12:01:53,065 [wrapper] pilotpid: 1941954
[2025-07-29 14:01:53] 2025-07-29 12:01:53,066 [wrapper] Pilot exit status: 0
[2025-07-29 14:01:53] 2025-07-29 12:01:53,072 [wrapper] pandaids: 6745227193
[2025-07-29 14:01:53] 2025-07-29 12:01:53,084 [wrapper] cleanup supervisor_pilot 1960109 1941955
[2025-07-29 14:01:53] 2025-07-29 12:01:53,085 [wrapper] Test setup, not cleaning
[2025-07-29 14:01:53] 2025-07-29 12:01:53,086 [wrapper] apfmon messages muted
[2025-07-29 14:01:53] 2025-07-29 12:01:53,088 [wrapper] ==== wrapper stdout END ====
[2025-07-29 14:01:53] 2025-07-29 12:01:53,089 [wrapper] ==== wrapper stderr END ====
[2025-07-29 14:01:53]  *** Error codes and diagnostics ***
[2025-07-29 14:01:53]     "exeErrorCode": 0,
[2025-07-29 14:01:53]     "exeErrorDiag": "",
[2025-07-29 14:01:53]     "pilotErrorCode": 0,
[2025-07-29 14:01:53]     "pilotErrorDiag": "",
[2025-07-29 14:01:53]  *** Listing of results directory ***
[2025-07-29 14:01:53] total 352964
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc    530466 Jul 26 14:44 pilot3.tar.gz
[2025-07-29 14:01:53] -rwx------ 1 boinc boinc     36292 Jul 26 14:55 runpilot2-wrapper.sh
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc      5112 Jul 26 14:55 queuedata.json
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc       100 Jul 29 12:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 14:01:53] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 12:34 run_atlas
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc       105 Jul 29 12:34 job.xml
[2025-07-29 14:01:53] -rw-r--r-- 2 boinc boinc 145224373 Jul 29 12:34 EVNT.45743347._002187.pool.root.1
[2025-07-29 14:01:53] -rw-r--r-- 2 boinc boinc     15095 Jul 29 12:34 start_atlas.sh
[2025-07-29 14:01:53] drwxrwx--x 2 boinc boinc      4096 Jul 29 12:34 shared
[2025-07-29 14:01:53] -rw-r--r-- 2 boinc boinc    542892 Jul 29 12:34 input.tar.gz
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc      9224 Jul 29 12:34 init_data.xml
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc         0 Jul 29 12:34 boinc_lockfile
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc      2563 Jul 29 12:34 pandaJob.out
[2025-07-29 14:01:53] -rw------- 1 boinc boinc    977316 Jul 29 12:34 agis_schedconf.cvmfs.json
[2025-07-29 14:01:53] -rw------- 1 boinc boinc   1589827 Jul 29 12:34 agis_ddmendpoints.agis.ALL.json
[2025-07-29 14:01:53] drwx------ 4 boinc boinc      4096 Jul 29 12:34 pilot3
[2025-07-29 14:01:53] -rw------- 1 boinc boinc 210832065 Jul 29 14:00 HITS.45743349._038196.pool.root.1
[2025-07-29 14:01:53] -rw------- 1 boinc boinc      1018 Jul 29 14:01 memory_monitor_summary.json
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc       529 Jul 29 14:01 boinc_task_state.xml
[2025-07-29 14:01:53] -rw------- 1 boinc boinc    238337 Jul 29 14:01 log.45743349._038196.job.log.tgz.1
[2025-07-29 14:01:53] -rw------- 1 boinc boinc        95 Jul 29 14:01 pilot_heartbeat.json
[2025-07-29 14:01:53] -rw------- 1 boinc boinc      7756 Jul 29 14:01 heartbeat.json
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc      8192 Jul 29 14:01 boinc_mmap_file
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc        27 Jul 29 14:01 wrapper_checkpoint.txt
[2025-07-29 14:01:53] -rw------- 1 boinc boinc       747 Jul 29 14:01 pilotlog.txt
[2025-07-29 14:01:53] -rw------- 1 boinc boinc    508552 Jul 29 14:01 log.45743349._038196.job.log.1
[2025-07-29 14:01:53] -rw------- 1 boinc boinc       357 Jul 29 14:01 output.list
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc       620 Jul 29 14:01 runtime_log
[2025-07-29 14:01:53] -rw------- 1 boinc boinc    768000 Jul 29 14:01 result.tar.gz
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc      8797 Jul 29 14:01 runtime_log.err
[2025-07-29 14:01:53] -rw------- 1 boinc boinc       656 Jul 29 14:01 8TJMDmUctz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFn0KDmtnrY2m.diag
[2025-07-29 14:01:53] -rw-r--r-- 1 boinc boinc     21924 Jul 29 14:01 stderr.txt
[2025-07-29 14:01:53] HITS file was successfully produced:
[2025-07-29 14:01:53] -rw------- 1 boinc boinc 210832065 Jul 29 14:00 shared/HITS.pool.root.1
[2025-07-29 14:01:53]  *** Contents of shared directory: ***
[2025-07-29 14:01:53] total 349024
[2025-07-29 14:01:53] -rw-r--r-- 2 boinc boinc 145224373 Jul 29 12:34 ATLAS.root_0
[2025-07-29 14:01:53] -rw-r--r-- 2 boinc boinc     15095 Jul 29 12:34 start_atlas.sh
[2025-07-29 14:01:53] -rw-r--r-- 2 boinc boinc    542892 Jul 29 12:34 input.tar.gz
[2025-07-29 14:01:53] -rw------- 1 boinc boinc 210832065 Jul 29 14:00 HITS.pool.root.1
[2025-07-29 14:01:53] -rw------- 1 boinc boinc    768000 Jul 29 14:01 result.tar.gz
14:01:54 (1937704): run_atlas exited; CPU time 19873.383647
14:01:54 (1937704): called boinc_finish(0)

</stderr_txt>
]]>

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