Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:04:10 (25399): wrapper (7.7.26015): starting
18:04:10 (25399): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 18:04:10] Arguments: --nthreads 12
[2025-07-28 18:04:10] Threads: 12
[2025-07-28 18:04:10] Checking for CVMFS
[2025-07-28 18:04:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 18:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 18:04:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 18:04:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 18:04:10] 2.11.2.0 2979 114031 93096 148866 3 1 15414493 20275201 1 130560 0 39622942 99.972 9684773 10534 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 18:04:10] CVMFS is ok
[2025-07-28 18:04:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 18:04:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 18:04:10] Further information can be found at the LHC@home message board.
[2025-07-28 18:04:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 18:04:10] Checking for apptainer binary...
[2025-07-28 18:04:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 18:04:10] Running /usr/bin/apptainer --version
[2025-07-28 18:04:10] apptainer version 1.3.2-1.el7
[2025-07-28 18:04:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 18:04:12] c-205-21.aglt2.org
[2025-07-28 18:04:12] apptainer works
[2025-07-28 18:04:12] Set ATHENA_PROC_NUMBER=12
[2025-07-28 18:04:12] Set ATHENA_CORE_NUMBER=12
[2025-07-28 18:04:12] Starting ATLAS job with PandaID=6749156436
[2025-07-28 18:04:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 19:31:27]  *** The last 200 lines of the pilot log: ***
[2025-07-28 19:31:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-28 19:31:27]  is_altstaged=None
[2025-07-28 19:31:27]  is_tar=False
[2025-07-28 19:31:27]  lfn=log.45759290._000132.job.log.tgz.1
[2025-07-28 19:31:27]  mtime=0
[2025-07-28 19:31:27]  protocol_id=None
[2025-07-28 19:31:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 19:31:27]  replicas=None
[2025-07-28 19:31:27]  scope=mc23_13p6TeV
[2025-07-28 19:31:27]  status=None
[2025-07-28 19:31:27]  status_code=0
[2025-07-28 19:31:27]  storage_token=
[2025-07-28 19:31:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6749156436/log.45759290._000132.job.log.tgz.1
[2025-07-28 19:31:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/fa/log.45759290._000132.job.log.tgz.1
[2025-07-28 19:31:27]  workdir=None
[2025-07-28 19:31:27] ]
[2025-07-28 19:31:27] 2025-07-28 23:30:49,489 | INFO     | transferring file log.45759290._000132.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6749156436/log.45759290._000132.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 19:31:27] 2025-07-28 23:30:49,489 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6749156436/log.45759290._000132.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759290._000132.job
[2025-07-28 19:31:27] 2025-07-28 23:30:49,512 | INFO     | adding to output.list: log.45759290._000132.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/fa/log.45759290._000132.job.log.tg
[2025-07-28 19:31:27] 2025-07-28 23:30:49,513 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 19:31:27] 2025-07-28 23:30:49,513 | INFO     | summary of transferred files:
[2025-07-28 19:31:27] 2025-07-28 23:30:49,513 | INFO     |  -- lfn=log.45759290._000132.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 19:31:27] 2025-07-28 23:30:49,514 | INFO     | stage-out finished correctly
[2025-07-28 19:31:27] 2025-07-28 23:30:50,240 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 19:31:27] 2025-07-28 23:30:50,667 | INFO     | job 6749156436 has state=finished
[2025-07-28 19:31:27] 2025-07-28 23:30:50,667 | INFO     | preparing for final server update for job 6749156436 in state='finished'
[2025-07-28 19:31:27] 2025-07-28 23:30:50,667 | INFO     | this job has now completed (state=finished)
[2025-07-28 19:31:27] 2025-07-28 23:30:50,668 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 19:31:27] 2025-07-28 23:30:50,668 | INFO     | log transfer has been attempted: DONE
[2025-07-28 19:31:27] 2025-07-28 23:30:50,668 | INFO     | job 6749156436 has finished - writing final server update
[2025-07-28 19:31:27] 2025-07-28 23:30:50,668 | INFO     | total number of processed events: 400 (read)
[2025-07-28 19:31:27] 2025-07-28 23:30:50,669 | INFO     | executing command: lscpu
[2025-07-28 19:31:27] 2025-07-28 23:30:50,696 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 19:31:27] 2025-07-28 23:30:54,424 | WARNING  | process 3232 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 19:31:27] 2025-07-28 23:30:54,424 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6749156436/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 19:31:27] 2025-07-28 23:30:54,514 | INFO     | number of running child processes to parent process 3232: 1
[2025-07-28 19:31:27] 2025-07-28 23:30:54,514 | INFO     | maximum number of monitored processes: 6
[2025-07-28 19:31:27] 2025-07-28 23:30:55,802 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 19:31:27] 2025-07-28 23:30:55,805 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.3333333333333
[2025-07-28 19:31:27] 2025-07-28 23:30:55,808 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6749156436/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 19:31:27] 2025-07-28 23:30:55,809 | INFO     | extracted standard info from prmon json
[2025-07-28 19:31:27] 2025-07-28 23:30:55,809 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 19:31:27] 2025-07-28 23:30:55,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 19:31:27] 2025-07-28 23:30:55,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 19:31:27] 2025-07-28 23:30:55,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 19:31:27] 2025-07-28 23:30:55,812 | INFO     | fitting pss+swap vs Time
[2025-07-28 19:31:27] 2025-07-28 23:30:55,812 | INFO     | sum of square deviations: 147126479.5
[2025-07-28 19:31:27] 2025-07-28 23:30:55,812 | INFO     | sum of deviations: -2514242490.0
[2025-07-28 19:31:27] 2025-07-28 23:30:55,812 | INFO     | mean x: 1753742950.5
[2025-07-28 19:31:27] 2025-07-28 23:30:55,812 | INFO     | mean y: 2716545.3076923075
[2025-07-28 19:31:27] 2025-07-28 23:30:55,813 | INFO     | -- intersect: 29972406961.811314
[2025-07-28 19:31:27] 2025-07-28 23:30:55,813 | INFO     | intersect: 29972406961.811314
[2025-07-28 19:31:27] 2025-07-28 23:30:55,813 | INFO     | chi2: 0.0357120804731227
[2025-07-28 19:31:27] 2025-07-28 23:30:55,813 | INFO     | -- intersect: 29972406961.811314
[2025-07-28 19:31:27] 2025-07-28 23:30:55,813 | INFO     | current memory leak: -17.09 B/s (using 78 data points, chi2=0.04)
[2025-07-28 19:31:27] 2025-07-28 23:30:55,813 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-07-28 19:31:27] 2025-07-28 23:30:55,814 | INFO     | ..............................
[2025-07-28 19:31:27] 2025-07-28 23:30:55,814 | INFO     | . Timing measurements:
[2025-07-28 19:31:27] 2025-07-28 23:30:55,814 | INFO     | . get job = 0 s
[2025-07-28 19:31:27] 2025-07-28 23:30:55,814 | INFO     | . initial setup = 2 s
[2025-07-28 19:31:27] 2025-07-28 23:30:55,814 | INFO     | . payload setup = 9 s
[2025-07-28 19:31:27] 2025-07-28 23:30:55,814 | INFO     | . stage-in = 0 s
[2025-07-28 19:31:27] 2025-07-28 23:30:55,814 | INFO     | . payload execution = 5153 s
[2025-07-28 19:31:27] 2025-07-28 23:30:55,814 | INFO     | . stage-out = 0 s
[2025-07-28 19:31:27] 2025-07-28 23:30:55,814 | INFO     | . log creation = 0 s
[2025-07-28 19:31:27] 2025-07-28 23:30:55,815 | INFO     | ..............................
[2025-07-28 19:31:27] 2025-07-28 23:30:56,187 | INFO     | 
[2025-07-28 19:31:27] 2025-07-28 23:30:56,187 | INFO     | job summary report
[2025-07-28 19:31:27] 2025-07-28 23:30:56,187 | INFO     | --------------------------------------------------
[2025-07-28 19:31:27] 2025-07-28 23:30:56,188 | INFO     | PanDA job id: 6749156436
[2025-07-28 19:31:27] 2025-07-28 23:30:56,188 | INFO     | task id: 45759290
[2025-07-28 19:31:27] 2025-07-28 23:30:56,188 | INFO     | errors: (none)
[2025-07-28 19:31:27] 2025-07-28 23:30:56,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 19:31:27] 2025-07-28 23:30:56,188 | INFO     | pilot state: finished 
[2025-07-28 19:31:27] 2025-07-28 23:30:56,188 | INFO     | transexitcode: 0
[2025-07-28 19:31:27] 2025-07-28 23:30:56,189 | INFO     | exeerrorcode: 0
[2025-07-28 19:31:27] 2025-07-28 23:30:56,189 | INFO     | exeerrordiag: 
[2025-07-28 19:31:27] 2025-07-28 23:30:56,189 | INFO     | exitcode: 0
[2025-07-28 19:31:27] 2025-07-28 23:30:56,189 | INFO     | exitmsg: OK
[2025-07-28 19:31:27] 2025-07-28 23:30:56,189 | INFO     | cpuconsumptiontime: 56163 s
[2025-07-28 19:31:27] 2025-07-28 23:30:56,189 | INFO     | nevents: 400
[2025-07-28 19:31:27] 2025-07-28 23:30:56,190 | INFO     | neventsw: 0
[2025-07-28 19:31:27] 2025-07-28 23:30:56,190 | INFO     | pid: 3232
[2025-07-28 19:31:27] 2025-07-28 23:30:56,190 | INFO     | pgrp: 3232
[2025-07-28 19:31:27] 2025-07-28 23:30:56,190 | INFO     | corecount: 12
[2025-07-28 19:31:27] 2025-07-28 23:30:56,190 | INFO     | event service: False
[2025-07-28 19:31:27] 2025-07-28 23:30:56,190 | INFO     | sizes: {0: 2390965, 1: 2391821, 6: 2392083, 12: 2392111, 5167: 2418432, 5168: 2427614, 5174: 2427752}
[2025-07-28 19:31:27] 2025-07-28 23:30:56,190 | INFO     | --------------------------------------------------
[2025-07-28 19:31:27] 2025-07-28 23:30:56,190 | INFO     | 
[2025-07-28 19:31:27] 2025-07-28 23:30:56,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 19:31:27] 2025-07-28 23:30:56,214 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,214 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,214 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,214 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,215 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,215 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,215 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,215 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,216 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,216 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,216 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,216 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,216 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,217 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,217 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 19:31:27] 2025-07-28 23:30:56,217 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,217 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 19:31:27] 2025-07-28 23:30:56,217 | INFO     | job 6749156436 has completed (purged errors)
[2025-07-28 19:31:27] 2025-07-28 23:30:56,218 | INFO     | overall cleanup function is called
[2025-07-28 19:31:27] 2025-07-28 23:30:57,226 | INFO     | --- collectZombieJob: --- 10, [3232]
[2025-07-28 19:31:27] 2025-07-28 23:30:57,226 | INFO     | zombie collector waiting for pid 3232
[2025-07-28 19:31:27] 2025-07-28 23:30:57,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 19:31:27] 2025-07-28 23:30:57,226 | INFO     | collected zombie processes
[2025-07-28 19:31:27] 2025-07-28 23:30:57,226 | INFO     | will attempt to kill all subprocesses of pid=3232
[2025-07-28 19:31:27] 2025-07-28 23:30:57,317 | INFO     | process IDs to be killed: [3232] (in reverse order)
[2025-07-28 19:31:27] 2025-07-28 23:30:57,370 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 19:31:27] 2025-07-28 23:30:57,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 19:31:27] 2025-07-28 23:30:57,375 | INFO     | did not find any defunct processes belonging to 3232
[2025-07-28 19:31:27] 2025-07-28 23:30:57,378 | INFO     | did not find any defunct processes belonging to 3232
[2025-07-28 19:31:27] 2025-07-28 23:30:57,378 | INFO     | ready for new job
[2025-07-28 19:31:27] 2025-07-28 23:30:57,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 19:31:27] 2025-07-28 23:30:57,380 | INFO     | ***************************************
[2025-07-28 19:31:27] 2025-07-28 23:30:57,380 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 19:31:27] 2025-07-28 23:30:57,380 | INFO     | ***************************************
[2025-07-28 19:31:27] 2025-07-28 23:30:57,381 | INFO     | 
[2025-07-28 19:31:27] 2025-07-28 23:30:57,381 | INFO     | architecture information:
[2025-07-28 19:31:27] 2025-07-28 23:30:57,382 | INFO     | executing command: cat /etc/os-release
[2025-07-28 19:31:27] 2025-07-28 23:30:57,396 | INFO     | cat /etc/os-release:
[2025-07-28 19:31:27] NAME="CentOS Linux"
[2025-07-28 19:31:27] VERSION="7 (Core)"
[2025-07-28 19:31:27] ID="centos"
[2025-07-28 19:31:27] ID_LIKE="rhel fedora"
[2025-07-28 19:31:27] VERSION_ID="7"
[2025-07-28 19:31:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 19:31:27] ANSI_COLOR="0;31"
[2025-07-28 19:31:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 19:31:27] HOME_URL="https://www.centos.org/"
[2025-07-28 19:31:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 19:31:27] 
[2025-07-28 19:31:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 19:31:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 19:31:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 19:31:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 19:31:27] 
[2025-07-28 19:31:27] 2025-07-28 23:30:57,396 | INFO     | ***************************************
[2025-07-28 19:31:27] 2025-07-28 23:30:57,899 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 19:31:27] 2025-07-28 23:30:57,916 | INFO     | sufficient remaining disk space (29350690816 B)
[2025-07-28 19:31:27] 2025-07-28 23:30:57,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 19:31:27] 2025-07-28 23:30:57,917 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 19:31:27] 2025-07-28 23:30:57,917 | INFO     | update_server=False
[2025-07-28 19:31:27] 2025-07-28 23:30:57,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 19:31:27] 2025-07-28 23:30:57,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 19:31:27] 2025-07-28 23:30:57,973 | INFO     | all data control threads have been joined
[2025-07-28 19:31:27] 2025-07-28 23:30:58,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:31:27] 2025-07-28 23:30:58,023 | INFO     | aborting loop
[2025-07-28 19:31:27] 2025-07-28 23:30:58,368 | INFO     | all job control threads have been joined
[2025-07-28 19:31:27] 2025-07-28 23:30:58,923 | INFO     | [job] retrieve thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:30:58,979 | INFO     | [data] control thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:30:59,028 | INFO     | [job] job monitor thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:30:59,174 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:30:59,174 | INFO     | all payload control threads have been joined
[2025-07-28 19:31:27] 2025-07-28 23:30:59,369 | INFO     | [job] control thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:30:59,382 | INFO     | [payload] validate_post thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:30:59,494 | INFO     | [data] copytool_in thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:30:59,859 | INFO     | [payload] failed_post thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:30:59,923 | INFO     | [data] copytool_out thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:31:00,145 | INFO     | [job] validate thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:31:00,180 | INFO     | [payload] control thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:31:00,191 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:31:00,311 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:31:00,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 19:31:27] 2025-07-28 23:31:00,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:31:27] 2025-07-28 23:31:01,914 | INFO     | [job] queue monitor thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:31:04,843 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:31:08,666 | INFO     | job.realtimelogging is not enabled
[2025-07-28 19:31:27] 2025-07-28 23:31:09,672 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 19:31:27] 2025-07-28 23:31:11,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139901257791296)>', '<ExcThread(monitor, started 139900682749696)>']
[2025-07-28 19:31:27] 2025-07-28 23:31:16,199 | INFO     | all workflow threads have been joined
[2025-07-28 19:31:27] 2025-07-28 23:31:16,200 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 19:31:27] 2025-07-28 23:31:16,206 | INFO     | traces error code: 0
[2025-07-28 19:31:27] 2025-07-28 23:31:16,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 19:31:27] 2025-07-28 23:31:27,606 | INFO     | PID=29089 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 19:31:27] 2025-07-28 23:31:27,606 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 19:31:27] 2025-07-28 23:31:27,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 19:31:27] 2025-07-28 23:31:27,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 19:31:27] 2025-07-28 23:31:27,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 19:31:27] 2025-07-28 23:31:27,607 | INFO     | [monitor] control thread has ended
[2025-07-28 19:31:27] 2025-07-28 23:31:27,696 [wrapper] ==== pilot stdout END ====
[2025-07-28 19:31:27] 2025-07-28 23:31:27,700 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 19:31:27] 2025-07-28 23:31:27,704 [wrapper] pilotpid: 29089
[2025-07-28 19:31:27] 2025-07-28 23:31:27,708 [wrapper] Pilot exit status: 0
[2025-07-28 19:31:27] 2025-07-28 23:31:27,723 [wrapper] pandaids: 6749156436
[2025-07-28 19:31:27] 2025-07-28 23:31:27,764 [wrapper] cleanup supervisor_pilot 19928 29090
[2025-07-28 19:31:27] 2025-07-28 23:31:27,769 [wrapper] Test setup, not cleaning
[2025-07-28 19:31:27] 2025-07-28 23:31:27,773 [wrapper] apfmon messages muted
[2025-07-28 19:31:27] 2025-07-28 23:31:27,777 [wrapper] ==== wrapper stdout END ====
[2025-07-28 19:31:27] 2025-07-28 23:31:27,781 [wrapper] ==== wrapper stderr END ====
[2025-07-28 19:31:27]  *** Error codes and diagnostics ***
[2025-07-28 19:31:27]     "exeErrorCode": 0,
[2025-07-28 19:31:27]     "exeErrorDiag": "",
[2025-07-28 19:31:27]     "pilotErrorCode": 0,
[2025-07-28 19:31:27]     "pilotErrorDiag": "",
[2025-07-28 19:31:27]  *** Listing of results directory ***
[2025-07-28 19:31:27] total 417532
[2025-07-28 19:31:27] -rwx------ 1 boincer umatlas     36292 Jul 28 18:03 runpilot2-wrapper.sh
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas      5112 Jul 28 18:03 queuedata.json
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas    530466 Jul 28 18:03 pilot3.tar.gz
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas       100 Jul 28 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 19:31:27] -rwxr-xr-x 1 boincer umatlas      7986 Jul 28 18:04 run_atlas
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas       105 Jul 28 18:04 job.xml
[2025-07-28 19:31:27] -rw-r--r-- 2 boincer umatlas 245880117 Jul 28 18:04 EVNT.45759282._000004.pool.root.1
[2025-07-28 19:31:27] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 18:04 start_atlas.sh
[2025-07-28 19:31:27] drwxrwx--x 2 boincer umatlas      4096 Jul 28 18:04 shared
[2025-07-28 19:31:27] -rw-r--r-- 2 boincer umatlas    542878 Jul 28 18:04 input.tar.gz
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas         0 Jul 28 18:04 boinc_lockfile
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas      2553 Jul 28 18:04 pandaJob.out
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas    977332 Jul 28 18:04 agis_schedconf.cvmfs.json
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas   1589827 Jul 28 18:04 agis_ddmendpoints.agis.ALL.json
[2025-07-28 19:31:27] drwx------ 4 boincer umatlas      4096 Jul 28 18:04 pilot3
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas      5867 Jul 28 19:20 init_data.xml
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas 176094457 Jul 28 19:30 HITS.45759290._000132.pool.root.1
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas        95 Jul 28 19:30 pilot_heartbeat.json
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas       529 Jul 28 19:30 boinc_task_state.xml
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas      1047 Jul 28 19:30 memory_monitor_summary.json
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas    366195 Jul 28 19:30 log.45759290._000132.job.log.tgz.1
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas      7834 Jul 28 19:30 heartbeat.json
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas      8192 Jul 28 19:31 boinc_mmap_file
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas        27 Jul 28 19:31 wrapper_checkpoint.txt
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas       745 Jul 28 19:31 pilotlog.txt
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas    489917 Jul 28 19:31 log.45759290._000132.job.log.1
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas       357 Jul 28 19:31 output.list
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas       620 Jul 28 19:31 runtime_log
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas    870400 Jul 28 19:31 result.tar.gz
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas      8662 Jul 28 19:31 runtime_log.err
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas       659 Jul 28 19:31 rGXMDmd7k07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmojWLDmqQScMo.diag
[2025-07-28 19:31:27] -rw-r--r-- 1 boincer umatlas     21409 Jul 28 19:31 stderr.txt
[2025-07-28 19:31:27] HITS file was successfully produced:
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas 176094457 Jul 28 19:30 shared/HITS.pool.root.1
[2025-07-28 19:31:27]  *** Contents of shared directory: ***
[2025-07-28 19:31:27] total 413492
[2025-07-28 19:31:27] -rw-r--r-- 2 boincer umatlas 245880117 Jul 28 18:04 ATLAS.root_0
[2025-07-28 19:31:27] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 18:04 start_atlas.sh
[2025-07-28 19:31:27] -rw-r--r-- 2 boincer umatlas    542878 Jul 28 18:04 input.tar.gz
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas 176094457 Jul 28 19:30 HITS.pool.root.1
[2025-07-28 19:31:27] -rw------- 1 boincer umatlas    870400 Jul 28 19:31 result.tar.gz
19:31:29 (25399): run_atlas exited; CPU time 56132.620464
19:31:29 (25399): called boinc_finish(0)

</stderr_txt>
]]>

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