Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:43:23 (7932): wrapper (7.7.26015): starting
15:43:23 (7932): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 15:43:23] Arguments: --nthreads 12
[2025-07-28 15:43:23] Threads: 12
[2025-07-28 15:43:23] Checking for CVMFS
[2025-07-28 15:43:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 15:43:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 15:43:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 15:43:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 15:43:24] 2.11.2.0 2998 113831 102728 148861 2 56 14868508 20275200 1 130560 0 39414276 99.972 9778740 11056 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 15:43:24] CVMFS is ok
[2025-07-28 15:43:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 15:43:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 15:43:24] Further information can be found at the LHC@home message board.
[2025-07-28 15:43:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 15:43:24] Checking for apptainer binary...
[2025-07-28 15:43:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 15:43:24] Running /usr/bin/apptainer --version
[2025-07-28 15:43:24] apptainer version 1.3.2-1.el7
[2025-07-28 15:43:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 15:43:25] c-205-25.aglt2.org
[2025-07-28 15:43:25] apptainer works
[2025-07-28 15:43:25] Set ATHENA_PROC_NUMBER=12
[2025-07-28 15:43:25] Set ATHENA_CORE_NUMBER=12
[2025-07-28 15:43:25] Starting ATLAS job with PandaID=6745063131
[2025-07-28 15:43:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:06:37]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:06:37]  is_altstaged=None
[2025-07-28 17:06:37]  is_tar=False
[2025-07-28 17:06:37]  lfn=log.45743349._027801.job.log.tgz.1
[2025-07-28 17:06:37]  mtime=0
[2025-07-28 17:06:37]  protocol_id=None
[2025-07-28 17:06:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 17:06:37]  replicas=None
[2025-07-28 17:06:37]  scope=mc23_13p6TeV
[2025-07-28 17:06:37]  status=None
[2025-07-28 17:06:37]  status_code=0
[2025-07-28 17:06:37]  storage_token=
[2025-07-28 17:06:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745063131/log.45743349._027801.job.log.tgz.1
[2025-07-28 17:06:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/64/log.45743349._027801.job.log.tgz.1
[2025-07-28 17:06:37]  workdir=None
[2025-07-28 17:06:37] ]
[2025-07-28 17:06:37] 2025-07-28 21:05:58,947 | INFO     | transferring file log.45743349._027801.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745063131/log.45743349._027801.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 17:06:37] 2025-07-28 21:05:58,947 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745063131/log.45743349._027801.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._027801.job
[2025-07-28 17:06:37] 2025-07-28 21:05:58,970 | INFO     | adding to output.list: log.45743349._027801.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/64/log.45743349._027801.job.log.tg
[2025-07-28 17:06:37] 2025-07-28 21:05:58,970 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 17:06:37] 2025-07-28 21:05:58,971 | INFO     | summary of transferred files:
[2025-07-28 17:06:37] 2025-07-28 21:05:58,971 | INFO     |  -- lfn=log.45743349._027801.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 17:06:37] 2025-07-28 21:05:58,971 | INFO     | stage-out finished correctly
[2025-07-28 17:06:37] 2025-07-28 21:05:59,055 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 17:06:37] 2025-07-28 21:05:59,137 | INFO     | job 6745063131 has state=finished
[2025-07-28 17:06:37] 2025-07-28 21:05:59,137 | INFO     | preparing for final server update for job 6745063131 in state='finished'
[2025-07-28 17:06:37] 2025-07-28 21:05:59,138 | INFO     | this job has now completed (state=finished)
[2025-07-28 17:06:37] 2025-07-28 21:05:59,138 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 17:06:37] 2025-07-28 21:05:59,138 | INFO     | log transfer has been attempted: DONE
[2025-07-28 17:06:37] 2025-07-28 21:05:59,139 | INFO     | job 6745063131 has finished - writing final server update
[2025-07-28 17:06:37] 2025-07-28 21:05:59,139 | INFO     | total number of processed events: 400 (read)
[2025-07-28 17:06:37] 2025-07-28 21:05:59,140 | INFO     | executing command: lscpu
[2025-07-28 17:06:37] 2025-07-28 21:05:59,167 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 17:06:37] 2025-07-28 21:06:00,725 | WARNING  | process 18059 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 17:06:37] 2025-07-28 21:06:00,725 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745063131/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:06:37] 2025-07-28 21:06:00,813 | INFO     | number of running child processes to parent process 18059: 1
[2025-07-28 17:06:37] 2025-07-28 21:06:00,813 | INFO     | maximum number of monitored processes: 6
[2025-07-28 17:06:37] 2025-07-28 21:06:03,316 | INFO     | monitor loop #370: job 0:6745063131 is in state 'finished'
[2025-07-28 17:06:37] 2025-07-28 21:06:03,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:06:37] 2025-07-28 21:06:04,109 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 17:06:37] 2025-07-28 21:06:04,112 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-28 17:06:37] 2025-07-28 21:06:04,115 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745063131/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:06:37] 2025-07-28 21:06:04,115 | INFO     | extracted standard info from prmon json
[2025-07-28 17:06:37] 2025-07-28 21:06:04,115 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 17:06:37] 2025-07-28 21:06:04,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:06:37] 2025-07-28 21:06:04,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:06:37] 2025-07-28 21:06:04,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:06:37] 2025-07-28 21:06:04,117 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:06:37] 2025-07-28 21:06:04,118 | INFO     | sum of square deviations: 125630262.5
[2025-07-28 17:06:37] 2025-07-28 21:06:04,118 | INFO     | sum of deviations: -1261909317.9999998
[2025-07-28 17:06:37] 2025-07-28 21:06:04,118 | INFO     | mean x: 1753734380.5
[2025-07-28 17:06:37] 2025-07-28 21:06:04,118 | INFO     | mean y: 2700800.2972972975
[2025-07-28 17:06:37] 2025-07-28 21:06:04,118 | INFO     | -- intersect: 17618311179.603058
[2025-07-28 17:06:37] 2025-07-28 21:06:04,119 | INFO     | intersect: 17618311179.603058
[2025-07-28 17:06:37] 2025-07-28 21:06:04,119 | INFO     | chi2: 0.0063984595188927695
[2025-07-28 17:06:37] 2025-07-28 21:06:04,119 | INFO     | -- intersect: 17618311179.603058
[2025-07-28 17:06:37] 2025-07-28 21:06:04,119 | INFO     | current memory leak: -10.04 B/s (using 74 data points, chi2=0.01)
[2025-07-28 17:06:37] 2025-07-28 21:06:04,119 | INFO     | could have reported an average CPU frequency of 2048 MHz (6 samples)
[2025-07-28 17:06:37] 2025-07-28 21:06:04,119 | INFO     | ..............................
[2025-07-28 17:06:37] 2025-07-28 21:06:04,120 | INFO     | . Timing measurements:
[2025-07-28 17:06:37] 2025-07-28 21:06:04,120 | INFO     | . get job = 0 s
[2025-07-28 17:06:37] 2025-07-28 21:06:04,120 | INFO     | . initial setup = 2 s
[2025-07-28 17:06:37] 2025-07-28 21:06:04,120 | INFO     | . payload setup = 9 s
[2025-07-28 17:06:37] 2025-07-28 21:06:04,120 | INFO     | . stage-in = 0 s
[2025-07-28 17:06:37] 2025-07-28 21:06:04,120 | INFO     | . payload execution = 4910 s
[2025-07-28 17:06:37] 2025-07-28 21:06:04,120 | INFO     | . stage-out = 0 s
[2025-07-28 17:06:37] 2025-07-28 21:06:04,120 | INFO     | . log creation = 0 s
[2025-07-28 17:06:37] 2025-07-28 21:06:04,120 | INFO     | ..............................
[2025-07-28 17:06:37] 2025-07-28 21:06:04,613 | INFO     | 
[2025-07-28 17:06:37] 2025-07-28 21:06:04,614 | INFO     | job summary report
[2025-07-28 17:06:37] 2025-07-28 21:06:04,614 | INFO     | --------------------------------------------------
[2025-07-28 17:06:37] 2025-07-28 21:06:04,614 | INFO     | PanDA job id: 6745063131
[2025-07-28 17:06:37] 2025-07-28 21:06:04,614 | INFO     | task id: 45743349
[2025-07-28 17:06:37] 2025-07-28 21:06:04,614 | INFO     | errors: (none)
[2025-07-28 17:06:37] 2025-07-28 21:06:04,614 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:06:37] 2025-07-28 21:06:04,615 | INFO     | pilot state: finished 
[2025-07-28 17:06:37] 2025-07-28 21:06:04,615 | INFO     | transexitcode: 0
[2025-07-28 17:06:37] 2025-07-28 21:06:04,615 | INFO     | exeerrorcode: 0
[2025-07-28 17:06:37] 2025-07-28 21:06:04,615 | INFO     | exeerrordiag: 
[2025-07-28 17:06:37] 2025-07-28 21:06:04,615 | INFO     | exitcode: 0
[2025-07-28 17:06:37] 2025-07-28 21:06:04,615 | INFO     | exitmsg: OK
[2025-07-28 17:06:37] 2025-07-28 21:06:04,616 | INFO     | cpuconsumptiontime: 53068 s
[2025-07-28 17:06:37] 2025-07-28 21:06:04,616 | INFO     | nevents: 400
[2025-07-28 17:06:37] 2025-07-28 21:06:04,616 | INFO     | neventsw: 0
[2025-07-28 17:06:37] 2025-07-28 21:06:04,616 | INFO     | pid: 18059
[2025-07-28 17:06:37] 2025-07-28 21:06:04,616 | INFO     | pgrp: 18059
[2025-07-28 17:06:37] 2025-07-28 21:06:04,616 | INFO     | corecount: 12
[2025-07-28 17:06:37] 2025-07-28 21:06:04,617 | INFO     | event service: False
[2025-07-28 17:06:37] 2025-07-28 21:06:04,617 | INFO     | sizes: {0: 2391909, 5: 2392171, 11: 2392227, 4924: 2418473, 4925: 2427527, 4930: 2427665}
[2025-07-28 17:06:37] 2025-07-28 21:06:04,617 | INFO     | --------------------------------------------------
[2025-07-28 17:06:37] 2025-07-28 21:06:04,617 | INFO     | 
[2025-07-28 17:06:37] 2025-07-28 21:06:04,617 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 17:06:37] 2025-07-28 21:06:04,641 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,642 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,642 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,642 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,644 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:06:37] 2025-07-28 21:06:04,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:06:37] 2025-07-28 21:06:04,645 | INFO     | job 6745063131 has completed (purged errors)
[2025-07-28 17:06:37] 2025-07-28 21:06:04,645 | INFO     | overall cleanup function is called
[2025-07-28 17:06:37] 2025-07-28 21:06:05,652 | INFO     | --- collectZombieJob: --- 10, [18059]
[2025-07-28 17:06:37] 2025-07-28 21:06:05,653 | INFO     | zombie collector waiting for pid 18059
[2025-07-28 17:06:37] 2025-07-28 21:06:05,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:06:37] 2025-07-28 21:06:05,653 | INFO     | collected zombie processes
[2025-07-28 17:06:37] 2025-07-28 21:06:05,653 | INFO     | will attempt to kill all subprocesses of pid=18059
[2025-07-28 17:06:37] 2025-07-28 21:06:05,744 | INFO     | process IDs to be killed: [18059] (in reverse order)
[2025-07-28 17:06:37] 2025-07-28 21:06:05,797 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:06:37] 2025-07-28 21:06:05,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:06:37] 2025-07-28 21:06:05,801 | INFO     | did not find any defunct processes belonging to 18059
[2025-07-28 17:06:37] 2025-07-28 21:06:05,805 | INFO     | did not find any defunct processes belonging to 18059
[2025-07-28 17:06:37] 2025-07-28 21:06:05,805 | INFO     | ready for new job
[2025-07-28 17:06:37] 2025-07-28 21:06:05,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:06:37] 2025-07-28 21:06:05,806 | INFO     | ***************************************
[2025-07-28 17:06:37] 2025-07-28 21:06:05,806 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:06:37] 2025-07-28 21:06:05,806 | INFO     | ***************************************
[2025-07-28 17:06:37] 2025-07-28 21:06:05,806 | INFO     | 
[2025-07-28 17:06:37] 2025-07-28 21:06:05,807 | INFO     | architecture information:
[2025-07-28 17:06:37] 2025-07-28 21:06:05,807 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:06:37] 2025-07-28 21:06:05,823 | INFO     | cat /etc/os-release:
[2025-07-28 17:06:37] NAME="CentOS Linux"
[2025-07-28 17:06:37] VERSION="7 (Core)"
[2025-07-28 17:06:37] ID="centos"
[2025-07-28 17:06:37] ID_LIKE="rhel fedora"
[2025-07-28 17:06:37] VERSION_ID="7"
[2025-07-28 17:06:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:06:37] ANSI_COLOR="0;31"
[2025-07-28 17:06:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:06:37] HOME_URL="https://www.centos.org/"
[2025-07-28 17:06:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:06:37] 
[2025-07-28 17:06:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:06:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:06:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:06:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:06:37] 
[2025-07-28 17:06:37] 2025-07-28 21:06:05,824 | INFO     | ***************************************
[2025-07-28 17:06:37] 2025-07-28 21:06:06,327 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 17:06:37] 2025-07-28 21:06:06,344 | INFO     | sufficient remaining disk space (29523705856 B)
[2025-07-28 17:06:37] 2025-07-28 21:06:06,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:06:37] 2025-07-28 21:06:06,344 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:06:37] 2025-07-28 21:06:06,344 | INFO     | update_server=False
[2025-07-28 17:06:37] 2025-07-28 21:06:06,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:06:37] 2025-07-28 21:06:06,453 | INFO     | all job control threads have been joined
[2025-07-28 17:06:37] 2025-07-28 21:06:06,766 | INFO     | all data control threads have been joined
[2025-07-28 17:06:37] 2025-07-28 21:06:06,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:06:37] 2025-07-28 21:06:06,824 | INFO     | aborting loop
[2025-07-28 17:06:37] 2025-07-28 21:06:07,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:06:37] 2025-07-28 21:06:07,350 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:07,459 | INFO     | [job] control thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:07,674 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:07,744 | INFO     | all payload control threads have been joined
[2025-07-28 17:06:37] 2025-07-28 21:06:07,771 | INFO     | [data] control thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:07,829 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:07,869 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:08,144 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:08,347 | INFO     | [job] validate thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:08,613 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:08,707 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:08,749 | INFO     | [payload] control thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:08,821 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:08,851 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:09,071 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:09,214 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:06:37] 2025-07-28 21:06:09,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:06:37] 2025-07-28 21:06:10,220 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:13,652 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:06:37] 2025-07-28 21:06:14,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140658828740416)>', '<ExcThread(monitor, started 140658526365440)>']
[2025-07-28 17:06:37] 2025-07-28 21:06:19,806 | INFO     | all workflow threads have been joined
[2025-07-28 17:06:37] 2025-07-28 21:06:19,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:06:37] 2025-07-28 21:06:19,812 | INFO     | traces error code: 0
[2025-07-28 17:06:37] 2025-07-28 21:06:19,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:06:37] 2025-07-28 21:06:37,047 | INFO     | PID=11539 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 17:06:37] 2025-07-28 21:06:37,048 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:06:37] 2025-07-28 21:06:37,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:06:37] 2025-07-28 21:06:37,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:06:37] 2025-07-28 21:06:37,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:06:37] 2025-07-28 21:06:37,048 | INFO     | [monitor] control thread has ended
[2025-07-28 17:06:37] 2025-07-28 21:06:37,132 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:06:37] 2025-07-28 21:06:37,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:06:37] 2025-07-28 21:06:37,140 [wrapper] pilotpid: 11539
[2025-07-28 17:06:37] 2025-07-28 21:06:37,144 [wrapper] Pilot exit status: 0
[2025-07-28 17:06:37] 2025-07-28 21:06:37,159 [wrapper] pandaids: 6745063131
[2025-07-28 17:06:37] 2025-07-28 21:06:37,200 [wrapper] cleanup supervisor_pilot  8377 11540
[2025-07-28 17:06:37] 2025-07-28 21:06:37,204 [wrapper] Test setup, not cleaning
[2025-07-28 17:06:37] 2025-07-28 21:06:37,208 [wrapper] apfmon messages muted
[2025-07-28 17:06:37] 2025-07-28 21:06:37,212 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:06:37] 2025-07-28 21:06:37,215 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:06:37]  *** Error codes and diagnostics ***
[2025-07-28 17:06:37]     "exeErrorCode": 0,
[2025-07-28 17:06:37]     "exeErrorDiag": "",
[2025-07-28 17:06:37]     "pilotErrorCode": 0,
[2025-07-28 17:06:37]     "pilotErrorDiag": "",
[2025-07-28 17:06:37]  *** Listing of results directory ***
[2025-07-28 17:06:37] total 348808
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 17:52 pilot3.tar.gz
[2025-07-28 17:06:37] -rwx------ 1 boincer umatlas     36292 Jul 25 17:58 runpilot2-wrapper.sh
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 17:58 queuedata.json
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas       100 Jul 28 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:06:37] -rwxr-xr-x 1 boincer umatlas      7986 Jul 28 15:43 run_atlas
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas       105 Jul 28 15:43 job.xml
[2025-07-28 17:06:37] -rw-r--r-- 2 boincer umatlas 143121913 Jul 28 15:43 EVNT.45743347._001546.pool.root.1
[2025-07-28 17:06:37] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 15:43 start_atlas.sh
[2025-07-28 17:06:37] drwxrwx--x 2 boincer umatlas      4096 Jul 28 15:43 shared
[2025-07-28 17:06:37] -rw-r--r-- 2 boincer umatlas    542892 Jul 28 15:43 input.tar.gz
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas         0 Jul 28 15:43 boinc_lockfile
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas      2563 Jul 28 15:43 pandaJob.out
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas    977348 Jul 28 15:43 agis_schedconf.cvmfs.json
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas   1589827 Jul 28 15:43 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:06:37] drwx------ 4 boincer umatlas      4096 Jul 28 15:43 pilot3
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas      5868 Jul 28 17:03 init_data.xml
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas 208523789 Jul 28 17:05 HITS.45743349._027801.pool.root.1
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas        95 Jul 28 17:05 pilot_heartbeat.json
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas       529 Jul 28 17:05 boinc_task_state.xml
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas      1050 Jul 28 17:05 memory_monitor_summary.json
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas    358555 Jul 28 17:05 log.45743349._027801.job.log.tgz.1
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas      7854 Jul 28 17:06 heartbeat.json
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas      8192 Jul 28 17:06 boinc_mmap_file
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas        27 Jul 28 17:06 wrapper_checkpoint.txt
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas       745 Jul 28 17:06 pilotlog.txt
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas    471176 Jul 28 17:06 log.45743349._027801.job.log.1
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas       357 Jul 28 17:06 output.list
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas       620 Jul 28 17:06 runtime_log
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas    849920 Jul 28 17:06 result.tar.gz
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas      8662 Jul 28 17:06 runtime_log.err
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas       659 Jul 28 17:06 fx5MDmYcfz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKYQLDm4nMBYm.diag
[2025-07-28 17:06:37] -rw-r--r-- 1 boincer umatlas     21492 Jul 28 17:06 stderr.txt
[2025-07-28 17:06:37] HITS file was successfully produced:
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas 208523789 Jul 28 17:05 shared/HITS.pool.root.1
[2025-07-28 17:06:37]  *** Contents of shared directory: ***
[2025-07-28 17:06:37] total 344792
[2025-07-28 17:06:37] -rw-r--r-- 2 boincer umatlas 143121913 Jul 28 15:43 ATLAS.root_0
[2025-07-28 17:06:37] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 15:43 start_atlas.sh
[2025-07-28 17:06:37] -rw-r--r-- 2 boincer umatlas    542892 Jul 28 15:43 input.tar.gz
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas 208523789 Jul 28 17:05 HITS.pool.root.1
[2025-07-28 17:06:37] -rw------- 1 boincer umatlas    849920 Jul 28 17:06 result.tar.gz
17:06:38 (7932): run_atlas exited; CPU time 53030.910695
17:06:38 (7932): called boinc_finish(0)

</stderr_txt>
]]>

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