Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:54:52 (3182): wrapper (7.7.26015): starting
14:54:52 (3182): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 14:54:52] Arguments: --nthreads 12
[2025-07-28 14:54:52] Threads: 12
[2025-07-28 14:54:52] Checking for CVMFS
[2025-07-28 14:54:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 14:54:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 14:54:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 14:54:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 14:54:52] 2.11.2.0 2979 113842 93508 148859 2 1 15388113 20275200 1 130560 0 39542754 99.972 9675415 10527 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 14:54:52] CVMFS is ok
[2025-07-28 14:54:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 14:54:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 14:54:52] Further information can be found at the LHC@home message board.
[2025-07-28 14:54:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 14:54:52] Checking for apptainer binary...
[2025-07-28 14:54:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 14:54:52] Running /usr/bin/apptainer --version
[2025-07-28 14:54:52] apptainer version 1.3.2-1.el7
[2025-07-28 14:54:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 14:54:54] c-205-21.aglt2.org
[2025-07-28 14:54:54] apptainer works
[2025-07-28 14:54:54] Set ATHENA_PROC_NUMBER=12
[2025-07-28 14:54:54] Set ATHENA_CORE_NUMBER=12
[2025-07-28 14:54:54] Starting ATLAS job with PandaID=6745067109
[2025-07-28 14:54:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 16:14:50]  *** The last 200 lines of the pilot log: ***
[2025-07-28 16:14:50]  lfn=log.45743349._029465.job.log.tgz.1
[2025-07-28 16:14:50]  mtime=0
[2025-07-28 16:14:50]  protocol_id=None
[2025-07-28 16:14:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 16:14:50]  replicas=None
[2025-07-28 16:14:50]  scope=mc23_13p6TeV
[2025-07-28 16:14:50]  status=None
[2025-07-28 16:14:50]  status_code=0
[2025-07-28 16:14:50]  storage_token=
[2025-07-28 16:14:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745067109/log.45743349._029465.job.log.tgz.1
[2025-07-28 16:14:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/e3/log.45743349._029465.job.log.tgz.1
[2025-07-28 16:14:50]  workdir=None
[2025-07-28 16:14:50] ]
[2025-07-28 16:14:50] 2025-07-28 20:14:09,937 | INFO     | transferring file log.45743349._029465.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745067109/log.45743349._029465.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 16:14:50] 2025-07-28 20:14:09,937 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745067109/log.45743349._029465.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._029465.job
[2025-07-28 16:14:50] 2025-07-28 20:14:09,960 | INFO     | adding to output.list: log.45743349._029465.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/e3/log.45743349._029465.job.log.tg
[2025-07-28 16:14:50] 2025-07-28 20:14:09,961 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 16:14:50] 2025-07-28 20:14:09,961 | INFO     | summary of transferred files:
[2025-07-28 16:14:50] 2025-07-28 20:14:09,962 | INFO     |  -- lfn=log.45743349._029465.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 16:14:50] 2025-07-28 20:14:09,962 | INFO     | stage-out finished correctly
[2025-07-28 16:14:50] 2025-07-28 20:14:10,046 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 16:14:50] 2025-07-28 20:14:11,477 | INFO     | monitor loop #355: job 0:6745067109 is in state 'finished'
[2025-07-28 16:14:50] 2025-07-28 20:14:11,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 16:14:50] 2025-07-28 20:14:11,487 | INFO     | job 6745067109 has state=finished
[2025-07-28 16:14:50] 2025-07-28 20:14:11,492 | INFO     | preparing for final server update for job 6745067109 in state='finished'
[2025-07-28 16:14:50] 2025-07-28 20:14:11,493 | INFO     | this job has now completed (state=finished)
[2025-07-28 16:14:50] 2025-07-28 20:14:11,493 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 16:14:50] 2025-07-28 20:14:11,493 | INFO     | log transfer has been attempted: DONE
[2025-07-28 16:14:50] 2025-07-28 20:14:11,493 | INFO     | job 6745067109 has finished - writing final server update
[2025-07-28 16:14:50] 2025-07-28 20:14:11,494 | INFO     | total number of processed events: 400 (read)
[2025-07-28 16:14:50] 2025-07-28 20:14:11,495 | INFO     | executing command: lscpu
[2025-07-28 16:14:50] 2025-07-28 20:14:11,524 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 16:14:50] 2025-07-28 20:14:12,608 | INFO     | 4747s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-28 16:14:50] 2025-07-28 20:14:13,994 | INFO     | monitor loop #356: job 0:6745067109 is in state 'finished'
[2025-07-28 16:14:50] 2025-07-28 20:14:13,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 16:14:50] 2025-07-28 20:14:15,731 | INFO     | PID=6981 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-28 16:14:50] 2025-07-28 20:14:16,497 | INFO     | monitor loop #357: job 0:6745067109 is in state 'finished'
[2025-07-28 16:14:50] 2025-07-28 20:14:16,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 16:14:50] 2025-07-28 20:14:17,390 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 16:14:50] 2025-07-28 20:14:17,394 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1784.5
[2025-07-28 16:14:50] 2025-07-28 20:14:17,396 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745067109/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 16:14:50] 2025-07-28 20:14:17,397 | INFO     | extracted standard info from prmon json
[2025-07-28 16:14:50] 2025-07-28 20:14:17,397 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 16:14:50] 2025-07-28 20:14:17,397 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 16:14:50] 2025-07-28 20:14:17,398 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 16:14:50] 2025-07-28 20:14:17,398 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 16:14:50] 2025-07-28 20:14:17,400 | INFO     | fitting pss+swap vs Time
[2025-07-28 16:14:50] 2025-07-28 20:14:17,401 | INFO     | sum of square deviations: 110960220.0
[2025-07-28 16:14:50] 2025-07-28 20:14:17,401 | INFO     | sum of deviations: -8443607434.000001
[2025-07-28 16:14:50] 2025-07-28 20:14:17,401 | INFO     | mean x: 1753731379.0
[2025-07-28 16:14:50] 2025-07-28 20:14:17,401 | INFO     | mean y: 2802823.408450704
[2025-07-28 16:14:50] 2025-07-28 20:14:17,401 | INFO     | -- intersect: 133454406550.97382
[2025-07-28 16:14:50] 2025-07-28 20:14:17,402 | INFO     | intersect: 133454406550.97382
[2025-07-28 16:14:50] 2025-07-28 20:14:17,402 | INFO     | chi2: 0.08904189601497747
[2025-07-28 16:14:50] 2025-07-28 20:14:17,402 | INFO     | -- intersect: 133454406550.97382
[2025-07-28 16:14:50] 2025-07-28 20:14:17,402 | INFO     | current memory leak: -76.10 B/s (using 71 data points, chi2=0.09)
[2025-07-28 16:14:50] 2025-07-28 20:14:17,402 | INFO     | could have reported an average CPU frequency of 2043 MHz (6 samples)
[2025-07-28 16:14:50] 2025-07-28 20:14:17,402 | INFO     | ..............................
[2025-07-28 16:14:50] 2025-07-28 20:14:17,403 | INFO     | . Timing measurements:
[2025-07-28 16:14:50] 2025-07-28 20:14:17,403 | INFO     | . get job = 0 s
[2025-07-28 16:14:50] 2025-07-28 20:14:17,403 | INFO     | . initial setup = 2 s
[2025-07-28 16:14:50] 2025-07-28 20:14:17,403 | INFO     | . payload setup = 9 s
[2025-07-28 16:14:50] 2025-07-28 20:14:17,403 | INFO     | . stage-in = 0 s
[2025-07-28 16:14:50] 2025-07-28 20:14:17,403 | INFO     | . payload execution = 4710 s
[2025-07-28 16:14:50] 2025-07-28 20:14:17,403 | INFO     | . stage-out = 0 s
[2025-07-28 16:14:50] 2025-07-28 20:14:17,403 | INFO     | . log creation = 0 s
[2025-07-28 16:14:50] 2025-07-28 20:14:17,403 | INFO     | ..............................
[2025-07-28 16:14:50] 2025-07-28 20:14:17,487 | INFO     | 
[2025-07-28 16:14:50] 2025-07-28 20:14:17,488 | INFO     | job summary report
[2025-07-28 16:14:50] 2025-07-28 20:14:17,488 | INFO     | --------------------------------------------------
[2025-07-28 16:14:50] 2025-07-28 20:14:17,488 | INFO     | PanDA job id: 6745067109
[2025-07-28 16:14:50] 2025-07-28 20:14:17,488 | INFO     | task id: 45743349
[2025-07-28 16:14:50] 2025-07-28 20:14:17,488 | INFO     | errors: (none)
[2025-07-28 16:14:50] 2025-07-28 20:14:17,488 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 16:14:50] 2025-07-28 20:14:17,489 | INFO     | pilot state: finished 
[2025-07-28 16:14:50] 2025-07-28 20:14:17,489 | INFO     | transexitcode: 0
[2025-07-28 16:14:50] 2025-07-28 20:14:17,489 | INFO     | exeerrorcode: 0
[2025-07-28 16:14:50] 2025-07-28 20:14:17,489 | INFO     | exeerrordiag: 
[2025-07-28 16:14:50] 2025-07-28 20:14:17,489 | INFO     | exitcode: 0
[2025-07-28 16:14:50] 2025-07-28 20:14:17,489 | INFO     | exitmsg: OK
[2025-07-28 16:14:50] 2025-07-28 20:14:17,489 | INFO     | cpuconsumptiontime: 50652 s
[2025-07-28 16:14:50] 2025-07-28 20:14:17,490 | INFO     | nevents: 400
[2025-07-28 16:14:50] 2025-07-28 20:14:17,490 | INFO     | neventsw: 0
[2025-07-28 16:14:50] 2025-07-28 20:14:17,490 | INFO     | pid: 13392
[2025-07-28 16:14:50] 2025-07-28 20:14:17,490 | INFO     | pgrp: 13392
[2025-07-28 16:14:50] 2025-07-28 20:14:17,490 | INFO     | corecount: 12
[2025-07-28 16:14:50] 2025-07-28 20:14:17,490 | INFO     | event service: False
[2025-07-28 16:14:50] 2025-07-28 20:14:17,490 | INFO     | sizes: {0: 2391682, 1: 2391937, 6: 2392199, 12: 2392227, 4724: 2418389, 4726: 2427571, 4734: 2427709}
[2025-07-28 16:14:50] 2025-07-28 20:14:17,490 | INFO     | --------------------------------------------------
[2025-07-28 16:14:50] 2025-07-28 20:14:17,490 | INFO     | 
[2025-07-28 16:14:50] 2025-07-28 20:14:17,490 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 16:14:50] 2025-07-28 20:14:17,580 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,581 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,581 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,581 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 16:14:50] 2025-07-28 20:14:17,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 16:14:50] 2025-07-28 20:14:17,584 | INFO     | job 6745067109 has completed (purged errors)
[2025-07-28 16:14:50] 2025-07-28 20:14:17,584 | INFO     | overall cleanup function is called
[2025-07-28 16:14:50] 2025-07-28 20:14:18,593 | INFO     | --- collectZombieJob: --- 10, [13392]
[2025-07-28 16:14:50] 2025-07-28 20:14:18,593 | INFO     | zombie collector waiting for pid 13392
[2025-07-28 16:14:50] 2025-07-28 20:14:18,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 16:14:50] 2025-07-28 20:14:18,593 | INFO     | collected zombie processes
[2025-07-28 16:14:50] 2025-07-28 20:14:18,593 | INFO     | will attempt to kill all subprocesses of pid=13392
[2025-07-28 16:14:50] 2025-07-28 20:14:18,682 | INFO     | process IDs to be killed: [13392] (in reverse order)
[2025-07-28 16:14:50] 2025-07-28 20:14:18,733 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 16:14:50] 2025-07-28 20:14:18,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 16:14:50] 2025-07-28 20:14:18,738 | INFO     | did not find any defunct processes belonging to 13392
[2025-07-28 16:14:50] 2025-07-28 20:14:18,741 | INFO     | did not find any defunct processes belonging to 13392
[2025-07-28 16:14:50] 2025-07-28 20:14:18,741 | INFO     | ready for new job
[2025-07-28 16:14:50] 2025-07-28 20:14:18,741 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 16:14:50] 2025-07-28 20:14:18,742 | INFO     | ***************************************
[2025-07-28 16:14:50] 2025-07-28 20:14:18,742 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 16:14:50] 2025-07-28 20:14:18,742 | INFO     | ***************************************
[2025-07-28 16:14:50] 2025-07-28 20:14:18,742 | INFO     | 
[2025-07-28 16:14:50] 2025-07-28 20:14:18,743 | INFO     | architecture information:
[2025-07-28 16:14:50] 2025-07-28 20:14:18,743 | INFO     | executing command: cat /etc/os-release
[2025-07-28 16:14:50] 2025-07-28 20:14:18,758 | INFO     | cat /etc/os-release:
[2025-07-28 16:14:50] NAME="CentOS Linux"
[2025-07-28 16:14:50] VERSION="7 (Core)"
[2025-07-28 16:14:50] ID="centos"
[2025-07-28 16:14:50] ID_LIKE="rhel fedora"
[2025-07-28 16:14:50] VERSION_ID="7"
[2025-07-28 16:14:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 16:14:50] ANSI_COLOR="0;31"
[2025-07-28 16:14:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 16:14:50] HOME_URL="https://www.centos.org/"
[2025-07-28 16:14:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 16:14:50] 
[2025-07-28 16:14:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 16:14:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 16:14:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 16:14:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 16:14:50] 
[2025-07-28 16:14:50] 2025-07-28 20:14:18,758 | INFO     | ***************************************
[2025-07-28 16:14:50] 2025-07-28 20:14:19,261 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 16:14:50] 2025-07-28 20:14:19,280 | INFO     | sufficient remaining disk space (29360128000 B)
[2025-07-28 16:14:50] 2025-07-28 20:14:19,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 16:14:50] 2025-07-28 20:14:19,280 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 16:14:50] 2025-07-28 20:14:19,280 | INFO     | update_server=False
[2025-07-28 16:14:50] 2025-07-28 20:14:19,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 16:14:50] 2025-07-28 20:14:19,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:14:50] 2025-07-28 20:14:19,433 | INFO     | all data control threads have been joined
[2025-07-28 16:14:50] 2025-07-28 20:14:19,836 | INFO     | all job control threads have been joined
[2025-07-28 16:14:50] 2025-07-28 20:14:20,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:14:50] 2025-07-28 20:14:20,018 | INFO     | aborting loop
[2025-07-28 16:14:50] 2025-07-28 20:14:20,286 | INFO     | [job] retrieve thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:20,287 | INFO     | [job] queue monitor thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:20,303 | INFO     | [payload] validate_post thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:20,439 | INFO     | [data] control thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:20,508 | INFO     | all payload control threads have been joined
[2025-07-28 16:14:50] 2025-07-28 20:14:20,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 16:14:50] 2025-07-28 20:14:20,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 16:14:50] 2025-07-28 20:14:20,843 | INFO     | [job] control thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:20,888 | INFO     | [job] validate thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:21,010 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:21,023 | INFO     | [job] job monitor thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:21,326 | INFO     | [payload] failed_post thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:21,510 | INFO     | [payload] control thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:21,576 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:21,593 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:21,617 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:21,749 | INFO     | [data] copytool_in thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:22,566 | INFO     | [data] copytool_out thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:24,642 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 16:14:50] 2025-07-28 20:14:24,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574156937024)>', '<ExcThread(monitor, started 140573029672704)>']
[2025-07-28 16:14:50] 2025-07-28 20:14:29,742 | INFO     | all workflow threads have been joined
[2025-07-28 16:14:50] 2025-07-28 20:14:29,743 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 16:14:50] 2025-07-28 20:14:29,743 | INFO     | traces error code: 0
[2025-07-28 16:14:50] 2025-07-28 20:14:29,743 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 16:14:50] 2025-07-28 20:14:49,936 | INFO     | PID=6981 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-28 16:14:50] 2025-07-28 20:14:49,936 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 16:14:50] 2025-07-28 20:14:49,936 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 16:14:50] 2025-07-28 20:14:49,936 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 16:14:50] 2025-07-28 20:14:49,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 16:14:50] 2025-07-28 20:14:49,936 | INFO     | [monitor] control thread has ended
[2025-07-28 16:14:50] 2025-07-28 20:14:50,031 [wrapper] ==== pilot stdout END ====
[2025-07-28 16:14:50] 2025-07-28 20:14:50,035 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 16:14:50] 2025-07-28 20:14:50,039 [wrapper] pilotpid: 6981
[2025-07-28 16:14:50] 2025-07-28 20:14:50,043 [wrapper] Pilot exit status: 0
[2025-07-28 16:14:50] 2025-07-28 20:14:50,060 [wrapper] pandaids: 6745067109
[2025-07-28 16:14:50] 2025-07-28 20:14:50,102 [wrapper] cleanup supervisor_pilot 31266 6982
[2025-07-28 16:14:50] 2025-07-28 20:14:50,106 [wrapper] Test setup, not cleaning
[2025-07-28 16:14:50] 2025-07-28 20:14:50,110 [wrapper] apfmon messages muted
[2025-07-28 16:14:50] 2025-07-28 20:14:50,114 [wrapper] ==== wrapper stdout END ====
[2025-07-28 16:14:50] 2025-07-28 20:14:50,118 [wrapper] ==== wrapper stderr END ====
[2025-07-28 16:14:50]  *** Error codes and diagnostics ***
[2025-07-28 16:14:50]     "exeErrorCode": 0,
[2025-07-28 16:14:50]     "exeErrorDiag": "",
[2025-07-28 16:14:50]     "pilotErrorCode": 0,
[2025-07-28 16:14:50]     "pilotErrorDiag": "",
[2025-07-28 16:14:50]  *** Listing of results directory ***
[2025-07-28 16:14:50] total 426268
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 20:19 pilot3.tar.gz
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 20:27 queuedata.json
[2025-07-28 16:14:50] -rwx------ 1 boincer umatlas     36292 Jul 25 20:27 runpilot2-wrapper.sh
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas       100 Jul 28 14:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 16:14:50] -rwxr-xr-x 1 boincer umatlas      7986 Jul 28 14:54 run_atlas
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas       105 Jul 28 14:54 job.xml
[2025-07-28 16:14:50] -rw-r--r-- 2 boincer umatlas 227705515 Jul 28 14:54 EVNT.45743347._001653.pool.root.1
[2025-07-28 16:14:50] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 14:54 start_atlas.sh
[2025-07-28 16:14:50] drwxrwx--x 2 boincer umatlas      4096 Jul 28 14:54 shared
[2025-07-28 16:14:50] -rw-r--r-- 2 boincer umatlas    542893 Jul 28 14:54 input.tar.gz
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas         0 Jul 28 14:54 boinc_lockfile
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas      2563 Jul 28 14:54 pandaJob.out
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas    977348 Jul 28 14:55 agis_schedconf.cvmfs.json
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas   1589827 Jul 28 14:55 agis_ddmendpoints.agis.ALL.json
[2025-07-28 16:14:50] drwx------ 4 boincer umatlas      4096 Jul 28 14:55 pilot3
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas      5867 Jul 28 16:10 init_data.xml
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas 203282649 Jul 28 16:13 HITS.45743349._029465.pool.root.1
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas       530 Jul 28 16:13 boinc_task_state.xml
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas      1045 Jul 28 16:14 memory_monitor_summary.json
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas        95 Jul 28 16:14 pilot_heartbeat.json
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas    371046 Jul 28 16:14 log.45743349._029465.job.log.tgz.1
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas      7853 Jul 28 16:14 heartbeat.json
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas        27 Jul 28 16:14 wrapper_checkpoint.txt
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas      8192 Jul 28 16:14 boinc_mmap_file
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas       744 Jul 28 16:14 pilotlog.txt
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas    453324 Jul 28 16:14 log.45743349._029465.job.log.1
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas       357 Jul 28 16:14 output.list
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas       620 Jul 28 16:14 runtime_log
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas    839680 Jul 28 16:14 result.tar.gz
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas      8662 Jul 28 16:14 runtime_log.err
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas       660 Jul 28 16:14 JM0LDmSwhz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoqQLDmKwzUgm.diag
[2025-07-28 16:14:50] -rw-r--r-- 1 boincer umatlas     21776 Jul 28 16:14 stderr.txt
[2025-07-28 16:14:50] HITS file was successfully produced:
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas 203282649 Jul 28 16:13 shared/HITS.pool.root.1
[2025-07-28 16:14:50]  *** Contents of shared directory: ***
[2025-07-28 16:14:50] total 422260
[2025-07-28 16:14:50] -rw-r--r-- 2 boincer umatlas 227705515 Jul 28 14:54 ATLAS.root_0
[2025-07-28 16:14:50] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 14:54 start_atlas.sh
[2025-07-28 16:14:50] -rw-r--r-- 2 boincer umatlas    542893 Jul 28 14:54 input.tar.gz
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas 203282649 Jul 28 16:13 HITS.pool.root.1
[2025-07-28 16:14:50] -rw------- 1 boincer umatlas    839680 Jul 28 16:14 result.tar.gz
16:14:52 (3182): run_atlas exited; CPU time 50627.763012
16:14:52 (3182): called boinc_finish(0)

</stderr_txt>
]]>

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