Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:22:21 (1874915): wrapper (7.7.26015): starting
14:22:21 (1874915): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 14:22:21] Arguments: --nthreads 8
[2025-07-28 14:22:21] Threads: 8
[2025-07-28 14:22:21] Checking for CVMFS
[2025-07-28 14:22:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 14:22:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 14:22:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 14:22:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 14:22:22] 2.13.0.0 99742 29025 337356 148859 0 52 22581331 32935936 22038 16776704 1 263851183 99.622 292648696 20322 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 14:22:22] CVMFS is ok
[2025-07-28 14:22:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 14:22:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 14:22:22] Further information can be found at the LHC@home message board.
[2025-07-28 14:22:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 14:22:22] Checking for apptainer binary...
[2025-07-28 14:22:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 14:22:22] Running /usr/bin/apptainer --version
[2025-07-28 14:22:22] apptainer version 1.4.1-1.el9
[2025-07-28 14:22:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 14:22:22] c7-6-31.aglt2.org
[2025-07-28 14:22:22] apptainer works
[2025-07-28 14:22:22] Set ATHENA_PROC_NUMBER=8
[2025-07-28 14:22:22] Set ATHENA_CORE_NUMBER=8
[2025-07-28 14:22:22] Starting ATLAS job with PandaID=6749004040
[2025-07-28 14:22:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 16:00:45]  *** The last 200 lines of the pilot log: ***
[2025-07-28 16:00:45]  is_tar=False
[2025-07-28 16:00:45]  lfn=log.45803688._000025.job.log.tgz.1
[2025-07-28 16:00:45]  mtime=0
[2025-07-28 16:00:45]  protocol_id=None
[2025-07-28 16:00:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 16:00:45]  replicas=None
[2025-07-28 16:00:45]  scope=mc23_13p6TeV
[2025-07-28 16:00:45]  status=None
[2025-07-28 16:00:45]  status_code=0
[2025-07-28 16:00:45]  storage_token=
[2025-07-28 16:00:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6749004040/log.45803688._000025.job.log.tgz.1
[2025-07-28 16:00:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/cd/log.45803688._000025.job.log.tgz.1
[2025-07-28 16:00:45]  workdir=None
[2025-07-28 16:00:45] ]
[2025-07-28 16:00:45] 2025-07-28 20:00:05,563 | INFO     | transferring file log.45803688._000025.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6749004040/log.45803688._000025.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 16:00:45] 2025-07-28 20:00:05,563 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6749004040/log.45803688._000025.job.log.tgz.1 /tmp/boinchome/slots/0/log.45803688._000025.job
[2025-07-28 16:00:45] 2025-07-28 20:00:05,578 | INFO     | adding to output.list: log.45803688._000025.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/cd/log.45803688._000025.job.log.tg
[2025-07-28 16:00:45] 2025-07-28 20:00:05,578 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 16:00:45] 2025-07-28 20:00:05,578 | INFO     | summary of transferred files:
[2025-07-28 16:00:45] 2025-07-28 20:00:05,578 | INFO     |  -- lfn=log.45803688._000025.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 16:00:45] 2025-07-28 20:00:05,578 | INFO     | stage-out finished correctly
[2025-07-28 16:00:45] 2025-07-28 20:00:07,629 | INFO     | monitor loop #415: job 0:6749004040 is in state 'finished'
[2025-07-28 16:00:45] 2025-07-28 20:00:07,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 16:00:45] 2025-07-28 20:00:08,534 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 16:00:45] 2025-07-28 20:00:08,672 | INFO     | job 6749004040 has state=finished
[2025-07-28 16:00:45] 2025-07-28 20:00:08,673 | INFO     | preparing for final server update for job 6749004040 in state='finished'
[2025-07-28 16:00:45] 2025-07-28 20:00:08,673 | INFO     | this job has now completed (state=finished)
[2025-07-28 16:00:45] 2025-07-28 20:00:08,673 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 16:00:45] 2025-07-28 20:00:08,673 | INFO     | log transfer has been attempted: DONE
[2025-07-28 16:00:45] 2025-07-28 20:00:08,673 | INFO     | job 6749004040 has finished - writing final server update
[2025-07-28 16:00:45] 2025-07-28 20:00:08,674 | INFO     | total number of processed events: 400 (read)
[2025-07-28 16:00:45] 2025-07-28 20:00:08,675 | INFO     | executing command: lscpu
[2025-07-28 16:00:45] 2025-07-28 20:00:08,742 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 16:00:45] 2025-07-28 20:00:10,133 | INFO     | monitor loop #416: job 0:6749004040 is in state 'finished'
[2025-07-28 16:00:45] 2025-07-28 20:00:10,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 16:00:45] 2025-07-28 20:00:12,637 | INFO     | monitor loop #417: job 0:6749004040 is in state 'finished'
[2025-07-28 16:00:45] 2025-07-28 20:00:12,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 16:00:45] 2025-07-28 20:00:12,817 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 16:00:45] 2025-07-28 20:00:12,829 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3305.814281250001
[2025-07-28 16:00:45] 2025-07-28 20:00:12,841 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6749004040/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 16:00:45] 2025-07-28 20:00:12,842 | INFO     | extracted standard info from prmon json
[2025-07-28 16:00:45] 2025-07-28 20:00:12,842 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 16:00:45] 2025-07-28 20:00:12,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 16:00:45] 2025-07-28 20:00:12,842 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 16:00:45] 2025-07-28 20:00:12,842 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 16:00:45] 2025-07-28 20:00:12,844 | INFO     | fitting pss+swap vs Time
[2025-07-28 16:00:45] 2025-07-28 20:00:12,844 | INFO     | sum of square deviations: 218571540.0
[2025-07-28 16:00:45] 2025-07-28 20:00:12,844 | INFO     | sum of deviations: -9079023328.000002
[2025-07-28 16:00:45] 2025-07-28 20:00:12,844 | INFO     | mean x: 1753729978.0
[2025-07-28 16:00:45] 2025-07-28 20:00:12,844 | INFO     | mean y: 2343586.617977528
[2025-07-28 16:00:45] 2025-07-28 20:00:12,844 | INFO     | -- intersect: 72848768977.93347
[2025-07-28 16:00:45] 2025-07-28 20:00:12,844 | INFO     | intersect: 72848768977.93347
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | chi2: 0.09102783450309503
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | -- intersect: 72848768977.93347
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | current memory leak: -41.54 B/s (using 89 data points, chi2=0.09)
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | could have reported an average CPU frequency of 3249 MHz (7 samples)
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | ..............................
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | . Timing measurements:
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | . get job = 0 s
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | . initial setup = 3 s
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | . payload setup = 9 s
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | . stage-in = 0 s
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | . payload execution = 5817 s
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | . stage-out = 0 s
[2025-07-28 16:00:45] 2025-07-28 20:00:12,845 | INFO     | . log creation = 0 s
[2025-07-28 16:00:45] 2025-07-28 20:00:12,846 | INFO     | ..............................
[2025-07-28 16:00:45] 2025-07-28 20:00:12,912 | INFO     | 
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | job summary report
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | --------------------------------------------------
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | PanDA job id: 6749004040
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | task id: 45803688
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | errors: (none)
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | pilot state: finished 
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | transexitcode: 0
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | exeerrorcode: 0
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | exeerrordiag: 
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | exitcode: 0
[2025-07-28 16:00:45] 2025-07-28 20:00:12,913 | INFO     | exitmsg: OK
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | cpuconsumptiontime: 40367 s
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | nevents: 400
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | neventsw: 0
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | pid: 1898262
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | pgrp: 1898262
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | corecount: 8
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | event service: False
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | sizes: {0: 2391653, 1: 2391852, 6: 2392114, 11: 2392142, 5830: 2418747, 5832: 2427745, 5835: 2427929, 5839: 2428123}
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | --------------------------------------------------
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | 
[2025-07-28 16:00:45] 2025-07-28 20:00:12,914 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 16:00:45] 2025-07-28 20:00:12,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 16:00:45] 2025-07-28 20:00:12,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 16:00:45] 2025-07-28 20:00:12,938 | INFO     | job 6749004040 has completed (purged errors)
[2025-07-28 16:00:45] 2025-07-28 20:00:12,938 | INFO     | overall cleanup function is called
[2025-07-28 16:00:45] 2025-07-28 20:00:13,947 | INFO     | --- collectZombieJob: --- 10, [1898262]
[2025-07-28 16:00:45] 2025-07-28 20:00:13,948 | INFO     | zombie collector waiting for pid 1898262
[2025-07-28 16:00:45] 2025-07-28 20:00:13,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 16:00:45] 2025-07-28 20:00:13,948 | INFO     | collected zombie processes
[2025-07-28 16:00:45] 2025-07-28 20:00:13,948 | INFO     | will attempt to kill all subprocesses of pid=1898262
[2025-07-28 16:00:45] 2025-07-28 20:00:14,475 | INFO     | process IDs to be killed: [1898262] (in reverse order)
[2025-07-28 16:00:45] 2025-07-28 20:00:14,638 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 16:00:45] 2025-07-28 20:00:14,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 16:00:45] 2025-07-28 20:00:14,661 | INFO     | did not find any defunct processes belonging to 1898262
[2025-07-28 16:00:45] 2025-07-28 20:00:14,684 | INFO     | did not find any defunct processes belonging to 1898262
[2025-07-28 16:00:45] 2025-07-28 20:00:14,684 | INFO     | ready for new job
[2025-07-28 16:00:45] 2025-07-28 20:00:14,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 16:00:45] 2025-07-28 20:00:14,687 | INFO     | ***************************************
[2025-07-28 16:00:45] 2025-07-28 20:00:14,687 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 16:00:45] 2025-07-28 20:00:14,687 | INFO     | ***************************************
[2025-07-28 16:00:45] 2025-07-28 20:00:14,687 | INFO     | 
[2025-07-28 16:00:45] 2025-07-28 20:00:14,705 | INFO     | architecture information:
[2025-07-28 16:00:45] 2025-07-28 20:00:14,705 | INFO     | executing command: cat /etc/os-release
[2025-07-28 16:00:45] 2025-07-28 20:00:14,724 | INFO     | cat /etc/os-release:
[2025-07-28 16:00:45] NAME="CentOS Linux"
[2025-07-28 16:00:45] VERSION="7 (Core)"
[2025-07-28 16:00:45] ID="centos"
[2025-07-28 16:00:45] ID_LIKE="rhel fedora"
[2025-07-28 16:00:45] VERSION_ID="7"
[2025-07-28 16:00:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 16:00:45] ANSI_COLOR="0;31"
[2025-07-28 16:00:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 16:00:45] HOME_URL="https://www.centos.org/"
[2025-07-28 16:00:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 16:00:45] 
[2025-07-28 16:00:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 16:00:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 16:00:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 16:00:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 16:00:45] 
[2025-07-28 16:00:45] 2025-07-28 20:00:14,724 | INFO     | ***************************************
[2025-07-28 16:00:45] 2025-07-28 20:00:15,228 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 16:00:45] 2025-07-28 20:00:15,247 | INFO     | sufficient remaining disk space (75793170432 B)
[2025-07-28 16:00:45] 2025-07-28 20:00:15,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 16:00:45] 2025-07-28 20:00:15,247 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 16:00:45] 2025-07-28 20:00:15,247 | INFO     | update_server=False
[2025-07-28 16:00:45] 2025-07-28 20:00:15,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 16:00:45] 2025-07-28 20:00:15,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 16:00:45] 2025-07-28 20:00:15,768 | INFO     | all data control threads have been joined
[2025-07-28 16:00:45] 2025-07-28 20:00:15,944 | INFO     | all payload control threads have been joined
[2025-07-28 16:00:45] 2025-07-28 20:00:16,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:00:45] 2025-07-28 20:00:16,146 | INFO     | aborting loop
[2025-07-28 16:00:45] 2025-07-28 20:00:16,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 16:00:45] 2025-07-28 20:00:16,252 | INFO     | [job] retrieve thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:16,412 | INFO     | all job control threads have been joined
[2025-07-28 16:00:45] 2025-07-28 20:00:16,430 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:16,577 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:16,581 | INFO     | [job] validate thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:16,672 | INFO     | [payload] validate_post thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:16,711 | INFO     | [payload] failed_post thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:16,773 | INFO     | [data] control thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:16,915 | INFO     | [data] copytool_in thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:16,950 | INFO     | [payload] control thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:17,151 | INFO     | [job] job monitor thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:17,418 | INFO     | [job] control thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:17,430 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:17,471 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:17,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:00:45] 2025-07-28 20:00:18,168 | INFO     | [data] copytool_out thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:18,929 | INFO     | [job] queue monitor thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:19,254 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 16:00:45] 2025-07-28 20:00:19,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139991886944064)>', '<ExcThread(monitor, started 139991095174912)>']
[2025-07-28 16:00:45] 2025-07-28 20:00:24,807 | INFO     | all workflow threads have been joined
[2025-07-28 16:00:45] 2025-07-28 20:00:24,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 16:00:45] 2025-07-28 20:00:24,807 | INFO     | traces error code: 0
[2025-07-28 16:00:45] 2025-07-28 20:00:24,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 16:00:45] 2025-07-28 20:00:45,295 | INFO     | PID=1881055 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 16:00:45] 2025-07-28 20:00:45,296 | INFO     | .. there are 29 such processes running
[2025-07-28 16:00:45] 2025-07-28 20:00:45,297 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 16:00:45] 2025-07-28 20:00:45,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 16:00:45] 2025-07-28 20:00:45,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 16:00:45] 2025-07-28 20:00:45,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 16:00:45] 2025-07-28 20:00:45,297 | INFO     | [monitor] control thread has ended
[2025-07-28 16:00:45] 2025-07-28 20:00:45,419 [wrapper] ==== pilot stdout END ====
[2025-07-28 16:00:45] 2025-07-28 20:00:45,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 16:00:45] 2025-07-28 20:00:45,427 [wrapper] pilotpid: 1881055
[2025-07-28 16:00:45] 2025-07-28 20:00:45,430 [wrapper] Pilot exit status: 0
[2025-07-28 16:00:45] 2025-07-28 20:00:45,450 [wrapper] pandaids: 6749004040
[2025-07-28 16:00:45] 2025-07-28 20:00:45,557 [wrapper] cleanup supervisor_pilot 3278116 1881056
[2025-07-28 16:00:45] 2025-07-28 20:00:45,561 [wrapper] Test setup, not cleaning
[2025-07-28 16:00:45] 2025-07-28 20:00:45,564 [wrapper] apfmon messages muted
[2025-07-28 16:00:45] 2025-07-28 20:00:45,566 [wrapper] ==== wrapper stdout END ====
[2025-07-28 16:00:45] 2025-07-28 20:00:45,569 [wrapper] ==== wrapper stderr END ====
[2025-07-28 16:00:45]  *** Error codes and diagnostics ***
[2025-07-28 16:00:45]     "exeErrorCode": 0,
[2025-07-28 16:00:45]     "exeErrorDiag": "",
[2025-07-28 16:00:45]     "pilotErrorCode": 0,
[2025-07-28 16:00:45]     "pilotErrorDiag": "",
[2025-07-28 16:00:45]  *** Listing of results directory ***
[2025-07-28 16:00:45] total 478676
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas    530466 Jul 28 14:01 pilot3.tar.gz
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas      5112 Jul 28 14:20 queuedata.json
[2025-07-28 16:00:45] -rwx------. 1 boincer umatlas     36292 Jul 28 14:20 runpilot2-wrapper.sh
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas       100 Jul 28 14:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 16:00:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 14:22 run_atlas
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas       105 Jul 28 14:22 job.xml
[2025-07-28 16:00:45] -rw-r--r--. 2 boincer umatlas 267474560 Jul 28 14:22 EVNT.45803686._000001.pool.root.1
[2025-07-28 16:00:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 14:22 start_atlas.sh
[2025-07-28 16:00:45] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 14:22 shared
[2025-07-28 16:00:45] -rw-r--r--. 2 boincer umatlas    542865 Jul 28 14:22 input.tar.gz
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas         0 Jul 28 14:22 boinc_lockfile
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas      2506 Jul 28 14:22 pandaJob.out
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas    977348 Jul 28 14:22 agis_schedconf.cvmfs.json
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas   1589827 Jul 28 14:22 agis_ddmendpoints.agis.ALL.json
[2025-07-28 16:00:45] drwx------. 4 boincer umatlas      4096 Jul 28 14:22 pilot3
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas      6932 Jul 28 15:57 init_data.xml
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas       529 Jul 28 15:59 boinc_task_state.xml
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas 217023328 Jul 28 15:59 HITS.45803688._000025.pool.root.1
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas      1045 Jul 28 16:00 memory_monitor_summary.json
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas        95 Jul 28 16:00 pilot_heartbeat.json
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas    338722 Jul 28 16:00 log.45803688._000025.job.log.tgz.1
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas      7775 Jul 28 16:00 heartbeat.json
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 16:00 boinc_mmap_file
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas        27 Jul 28 16:00 wrapper_checkpoint.txt
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas       823 Jul 28 16:00 pilotlog.txt
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas    557922 Jul 28 16:00 log.45803688._000025.job.log.1
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas       357 Jul 28 16:00 output.list
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas       620 Jul 28 16:00 runtime_log
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas    911360 Jul 28 16:00 result.tar.gz
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas       654 Jul 28 16:00 WB3LDmwdh07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbiWLDmKAoswn.diag
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas      8655 Jul 28 16:00 runtime_log.err
[2025-07-28 16:00:45] -rw-r--r--. 1 boincer umatlas     21610 Jul 28 16:00 stderr.txt
[2025-07-28 16:00:45] HITS file was successfully produced:
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas 217023328 Jul 28 15:59 shared/HITS.pool.root.1
[2025-07-28 16:00:45]  *** Contents of shared directory: ***
[2025-07-28 16:00:45] total 474596
[2025-07-28 16:00:45] -rw-r--r--. 2 boincer umatlas 267474560 Jul 28 14:22 ATLAS.root_0
[2025-07-28 16:00:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 14:22 start_atlas.sh
[2025-07-28 16:00:45] -rw-r--r--. 2 boincer umatlas    542865 Jul 28 14:22 input.tar.gz
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas 217023328 Jul 28 15:59 HITS.pool.root.1
[2025-07-28 16:00:45] -rw-------. 1 boincer umatlas    911360 Jul 28 16:00 result.tar.gz
16:00:47 (1874915): run_atlas exited; CPU time 40334.418715
16:00:47 (1874915): called boinc_finish(0)

</stderr_txt>
]]>

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