Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:28:53 (30504): wrapper (7.7.26015): starting
11:28:53 (30504): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 11:28:53] Arguments: --nthreads 12
[2025-07-28 11:28:53] Threads: 12
[2025-07-28 11:28:53] Checking for CVMFS
[2025-07-28 11:28:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 11:28:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 11:28:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 11:28:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 11:28:53] 2.11.2.0 2949 113622 95468 148853 2 1 10851720 20275201 1 130560 0 38832039 99.971 8895470 10097 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 11:28:53] CVMFS is ok
[2025-07-28 11:28:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 11:28:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 11:28:53] Further information can be found at the LHC@home message board.
[2025-07-28 11:28:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 11:28:53] Checking for apptainer binary...
[2025-07-28 11:28:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 11:28:53] Running /usr/bin/apptainer --version
[2025-07-28 11:28:53] apptainer version 1.3.2-1.el7
[2025-07-28 11:28:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 11:28:55] c-205-13.aglt2.org
[2025-07-28 11:28:55] apptainer works
[2025-07-28 11:28:55] Set ATHENA_PROC_NUMBER=12
[2025-07-28 11:28:55] Set ATHENA_CORE_NUMBER=12
[2025-07-28 11:28:55] Starting ATLAS job with PandaID=6748782613
[2025-07-28 11:28:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 12:59:55]  *** The last 200 lines of the pilot log: ***
[2025-07-28 12:59:55]  mtime=0
[2025-07-28 12:59:55]  protocol_id=None
[2025-07-28 12:59:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 12:59:55]  replicas=None
[2025-07-28 12:59:55]  scope=mc23_13p6TeV
[2025-07-28 12:59:55]  status=None
[2025-07-28 12:59:55]  status_code=0
[2025-07-28 12:59:55]  storage_token=
[2025-07-28 12:59:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748782613/log.45803666._000095.job.log.tgz.1
[2025-07-28 12:59:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/02/log.45803666._000095.job.log.tgz.1
[2025-07-28 12:59:55]  workdir=None
[2025-07-28 12:59:55] ]
[2025-07-28 12:59:55] 2025-07-28 16:59:16,065 | INFO     | transferring file log.45803666._000095.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748782613/log.45803666._000095.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 12:59:55] 2025-07-28 16:59:16,066 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748782613/log.45803666._000095.job.log.tgz.1 /tmp/boinchome/slots/0/log.45803666._000095.job
[2025-07-28 12:59:55] 2025-07-28 16:59:16,087 | INFO     | adding to output.list: log.45803666._000095.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/02/log.45803666._000095.job.log.tg
[2025-07-28 12:59:55] 2025-07-28 16:59:16,088 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 12:59:55] 2025-07-28 16:59:16,088 | INFO     | summary of transferred files:
[2025-07-28 12:59:55] 2025-07-28 16:59:16,088 | INFO     |  -- lfn=log.45803666._000095.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 12:59:55] 2025-07-28 16:59:16,088 | INFO     | stage-out finished correctly
[2025-07-28 12:59:55] 2025-07-28 16:59:16,196 | WARNING  | process 8480 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 12:59:55] 2025-07-28 16:59:16,202 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748782613/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 12:59:55] 2025-07-28 16:59:16,300 | INFO     | number of running child processes to parent process 8480: 1
[2025-07-28 12:59:55] 2025-07-28 16:59:16,300 | INFO     | maximum number of monitored processes: 6
[2025-07-28 12:59:55] 2025-07-28 16:59:18,452 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 12:59:55] 2025-07-28 16:59:18,549 | INFO     | job 6748782613 has state=finished
[2025-07-28 12:59:55] 2025-07-28 16:59:18,549 | INFO     | preparing for final server update for job 6748782613 in state='finished'
[2025-07-28 12:59:55] 2025-07-28 16:59:18,550 | INFO     | this job has now completed (state=finished)
[2025-07-28 12:59:55] 2025-07-28 16:59:18,550 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 12:59:55] 2025-07-28 16:59:18,550 | INFO     | log transfer has been attempted: DONE
[2025-07-28 12:59:55] 2025-07-28 16:59:18,551 | INFO     | job 6748782613 has finished - writing final server update
[2025-07-28 12:59:55] 2025-07-28 16:59:18,551 | INFO     | total number of processed events: 400 (read)
[2025-07-28 12:59:55] 2025-07-28 16:59:18,552 | INFO     | executing command: lscpu
[2025-07-28 12:59:55] 2025-07-28 16:59:18,576 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 12:59:55] 2025-07-28 16:59:18,803 | INFO     | monitor loop #404: job 0:6748782613 is in state 'finished'
[2025-07-28 12:59:55] 2025-07-28 16:59:18,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 12:59:55] 2025-07-28 16:59:21,307 | INFO     | monitor loop #405: job 0:6748782613 is in state 'finished'
[2025-07-28 12:59:55] 2025-07-28 16:59:21,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 12:59:55] 2025-07-28 16:59:23,530 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 12:59:55] 2025-07-28 16:59:23,534 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-28 12:59:55] 2025-07-28 16:59:23,537 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748782613/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 12:59:55] 2025-07-28 16:59:23,538 | INFO     | extracted standard info from prmon json
[2025-07-28 12:59:55] 2025-07-28 16:59:23,538 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 12:59:55] 2025-07-28 16:59:23,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 12:59:55] 2025-07-28 16:59:23,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 12:59:55] 2025-07-28 16:59:23,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 12:59:55] 2025-07-28 16:59:23,541 | INFO     | fitting pss+swap vs Time
[2025-07-28 12:59:55] 2025-07-28 16:59:23,541 | INFO     | sum of square deviations: 170944600.5
[2025-07-28 12:59:55] 2025-07-28 16:59:23,542 | INFO     | sum of deviations: -8260344524.000002
[2025-07-28 12:59:55] 2025-07-28 16:59:23,542 | INFO     | mean x: 1753719355.5
[2025-07-28 12:59:55] 2025-07-28 16:59:23,542 | INFO     | mean y: 2769669.487804878
[2025-07-28 12:59:55] 2025-07-28 16:59:23,542 | INFO     | -- intersect: 84745581273.16428
[2025-07-28 12:59:55] 2025-07-28 16:59:23,542 | INFO     | intersect: 84745581273.16428
[2025-07-28 12:59:55] 2025-07-28 16:59:23,542 | INFO     | chi2: 0.10021222428740069
[2025-07-28 12:59:55] 2025-07-28 16:59:23,542 | INFO     | -- intersect: 84745581273.16428
[2025-07-28 12:59:55] 2025-07-28 16:59:23,543 | INFO     | current memory leak: -48.32 B/s (using 82 data points, chi2=0.10)
[2025-07-28 12:59:55] 2025-07-28 16:59:23,543 | INFO     | could have reported an average CPU frequency of 2063 MHz (6 samples)
[2025-07-28 12:59:55] 2025-07-28 16:59:23,543 | INFO     | ..............................
[2025-07-28 12:59:55] 2025-07-28 16:59:23,543 | INFO     | . Timing measurements:
[2025-07-28 12:59:55] 2025-07-28 16:59:23,543 | INFO     | . get job = 0 s
[2025-07-28 12:59:55] 2025-07-28 16:59:23,543 | INFO     | . initial setup = 2 s
[2025-07-28 12:59:55] 2025-07-28 16:59:23,543 | INFO     | . payload setup = 9 s
[2025-07-28 12:59:55] 2025-07-28 16:59:23,544 | INFO     | . stage-in = 0 s
[2025-07-28 12:59:55] 2025-07-28 16:59:23,544 | INFO     | . payload execution = 5376 s
[2025-07-28 12:59:55] 2025-07-28 16:59:23,544 | INFO     | . stage-out = 0 s
[2025-07-28 12:59:55] 2025-07-28 16:59:23,544 | INFO     | . log creation = 0 s
[2025-07-28 12:59:55] 2025-07-28 16:59:23,544 | INFO     | ..............................
[2025-07-28 12:59:55] 2025-07-28 16:59:23,628 | INFO     | 
[2025-07-28 12:59:55] 2025-07-28 16:59:23,628 | INFO     | job summary report
[2025-07-28 12:59:55] 2025-07-28 16:59:23,628 | INFO     | --------------------------------------------------
[2025-07-28 12:59:55] 2025-07-28 16:59:23,628 | INFO     | PanDA job id: 6748782613
[2025-07-28 12:59:55] 2025-07-28 16:59:23,628 | INFO     | task id: 45803666
[2025-07-28 12:59:55] 2025-07-28 16:59:23,628 | INFO     | errors: (none)
[2025-07-28 12:59:55] 2025-07-28 16:59:23,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 12:59:55] 2025-07-28 16:59:23,628 | INFO     | pilot state: finished 
[2025-07-28 12:59:55] 2025-07-28 16:59:23,628 | INFO     | transexitcode: 0
[2025-07-28 12:59:55] 2025-07-28 16:59:23,629 | INFO     | exeerrorcode: 0
[2025-07-28 12:59:55] 2025-07-28 16:59:23,629 | INFO     | exeerrordiag: 
[2025-07-28 12:59:55] 2025-07-28 16:59:23,629 | INFO     | exitcode: 0
[2025-07-28 12:59:55] 2025-07-28 16:59:23,629 | INFO     | exitmsg: OK
[2025-07-28 12:59:55] 2025-07-28 16:59:23,629 | INFO     | cpuconsumptiontime: 58442 s
[2025-07-28 12:59:55] 2025-07-28 16:59:23,629 | INFO     | nevents: 400
[2025-07-28 12:59:55] 2025-07-28 16:59:23,629 | INFO     | neventsw: 0
[2025-07-28 12:59:55] 2025-07-28 16:59:23,629 | INFO     | pid: 8480
[2025-07-28 12:59:55] 2025-07-28 16:59:23,629 | INFO     | pgrp: 8480
[2025-07-28 12:59:55] 2025-07-28 16:59:23,630 | INFO     | corecount: 12
[2025-07-28 12:59:55] 2025-07-28 16:59:23,630 | INFO     | event service: False
[2025-07-28 12:59:55] 2025-07-28 16:59:23,630 | INFO     | sizes: {0: 2391656, 1: 2391855, 6: 2392117, 12: 2392145, 5390: 2418636, 5391: 2427634, 5394: 2427818, 5399: 2428012}
[2025-07-28 12:59:55] 2025-07-28 16:59:23,630 | INFO     | --------------------------------------------------
[2025-07-28 12:59:55] 2025-07-28 16:59:23,630 | INFO     | 
[2025-07-28 12:59:55] 2025-07-28 16:59:23,630 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 12:59:55] 2025-07-28 16:59:23,654 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,655 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,655 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,655 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,655 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,657 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,657 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,657 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 12:59:55] 2025-07-28 16:59:23,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,657 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 12:59:55] 2025-07-28 16:59:23,658 | INFO     | job 6748782613 has completed (purged errors)
[2025-07-28 12:59:55] 2025-07-28 16:59:23,658 | INFO     | overall cleanup function is called
[2025-07-28 12:59:55] 2025-07-28 16:59:24,666 | INFO     | --- collectZombieJob: --- 10, [8480]
[2025-07-28 12:59:55] 2025-07-28 16:59:24,666 | INFO     | zombie collector waiting for pid 8480
[2025-07-28 12:59:55] 2025-07-28 16:59:24,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 12:59:55] 2025-07-28 16:59:24,667 | INFO     | collected zombie processes
[2025-07-28 12:59:55] 2025-07-28 16:59:24,667 | INFO     | will attempt to kill all subprocesses of pid=8480
[2025-07-28 12:59:55] 2025-07-28 16:59:24,759 | INFO     | process IDs to be killed: [8480] (in reverse order)
[2025-07-28 12:59:55] 2025-07-28 16:59:24,807 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 12:59:55] 2025-07-28 16:59:24,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 12:59:55] 2025-07-28 16:59:24,811 | INFO     | did not find any defunct processes belonging to 8480
[2025-07-28 12:59:55] 2025-07-28 16:59:24,813 | INFO     | did not find any defunct processes belonging to 8480
[2025-07-28 12:59:55] 2025-07-28 16:59:24,813 | INFO     | ready for new job
[2025-07-28 12:59:55] 2025-07-28 16:59:24,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 12:59:55] 2025-07-28 16:59:24,814 | INFO     | ***************************************
[2025-07-28 12:59:55] 2025-07-28 16:59:24,815 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 12:59:55] 2025-07-28 16:59:24,815 | INFO     | ***************************************
[2025-07-28 12:59:55] 2025-07-28 16:59:24,815 | INFO     | 
[2025-07-28 12:59:55] 2025-07-28 16:59:24,815 | INFO     | architecture information:
[2025-07-28 12:59:55] 2025-07-28 16:59:24,816 | INFO     | executing command: cat /etc/os-release
[2025-07-28 12:59:55] 2025-07-28 16:59:24,833 | INFO     | cat /etc/os-release:
[2025-07-28 12:59:55] NAME="CentOS Linux"
[2025-07-28 12:59:55] VERSION="7 (Core)"
[2025-07-28 12:59:55] ID="centos"
[2025-07-28 12:59:55] ID_LIKE="rhel fedora"
[2025-07-28 12:59:55] VERSION_ID="7"
[2025-07-28 12:59:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 12:59:55] ANSI_COLOR="0;31"
[2025-07-28 12:59:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 12:59:55] HOME_URL="https://www.centos.org/"
[2025-07-28 12:59:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 12:59:55] 
[2025-07-28 12:59:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 12:59:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 12:59:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 12:59:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 12:59:55] 
[2025-07-28 12:59:55] 2025-07-28 16:59:24,833 | INFO     | ***************************************
[2025-07-28 12:59:55] 2025-07-28 16:59:25,336 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 12:59:55] 2025-07-28 16:59:25,354 | INFO     | sufficient remaining disk space (29264707584 B)
[2025-07-28 12:59:55] 2025-07-28 16:59:25,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 12:59:55] 2025-07-28 16:59:25,355 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 12:59:55] 2025-07-28 16:59:25,355 | INFO     | update_server=False
[2025-07-28 12:59:55] 2025-07-28 16:59:25,355 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 12:59:55] 2025-07-28 16:59:25,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 12:59:55] 2025-07-28 16:59:25,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:59:55] 2025-07-28 16:59:25,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:59:55] 2025-07-28 16:59:25,356 | INFO     | aborting loop
[2025-07-28 12:59:55] 2025-07-28 16:59:25,976 | INFO     | all payload control threads have been joined
[2025-07-28 12:59:55] 2025-07-28 16:59:26,025 | INFO     | all job control threads have been joined
[2025-07-28 12:59:55] 2025-07-28 16:59:26,221 | INFO     | all data control threads have been joined
[2025-07-28 12:59:55] 2025-07-28 16:59:26,358 | INFO     | [job] retrieve thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:26,361 | INFO     | [job] queue monitor thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:26,362 | INFO     | [job] job monitor thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:26,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 12:59:55] 2025-07-28 16:59:26,703 | INFO     | [data] copytool_in thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:26,719 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:26,981 | INFO     | [payload] control thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:27,031 | INFO     | [job] control thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:27,226 | INFO     | [data] control thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:27,491 | INFO     | [payload] validate_post thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:27,539 | INFO     | [job] validate thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:27,566 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:27,575 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:27,676 | INFO     | [payload] failed_post thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:28,695 | INFO     | [data] copytool_out thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:29,361 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:36,022 | INFO     | job.realtimelogging is not enabled
[2025-07-28 12:59:55] 2025-07-28 16:59:37,024 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 12:59:55] 2025-07-28 16:59:38,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830372996928)>', '<ExcThread(monitor, started 139830067439360)>']
[2025-07-28 12:59:55] 2025-07-28 16:59:43,789 | INFO     | all workflow threads have been joined
[2025-07-28 12:59:55] 2025-07-28 16:59:43,789 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 12:59:55] 2025-07-28 16:59:43,790 | INFO     | traces error code: 0
[2025-07-28 12:59:55] 2025-07-28 16:59:43,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 12:59:55] 2025-07-28 16:59:55,077 | INFO     | PID=1840 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-28 12:59:55] 2025-07-28 16:59:55,080 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 12:59:55] 2025-07-28 16:59:55,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 12:59:55] 2025-07-28 16:59:55,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 12:59:55] 2025-07-28 16:59:55,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 12:59:55] 2025-07-28 16:59:55,080 | INFO     | [monitor] control thread has ended
[2025-07-28 12:59:55] 2025-07-28 16:59:55,173 [wrapper] ==== pilot stdout END ====
[2025-07-28 12:59:55] 2025-07-28 16:59:55,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 12:59:55] 2025-07-28 16:59:55,180 [wrapper] pilotpid: 1840
[2025-07-28 12:59:55] 2025-07-28 16:59:55,184 [wrapper] Pilot exit status: 0
[2025-07-28 12:59:55] 2025-07-28 16:59:55,201 [wrapper] pandaids: 6748782613
[2025-07-28 12:59:55] 2025-07-28 16:59:55,243 [wrapper] cleanup supervisor_pilot 31338 1841
[2025-07-28 12:59:55] 2025-07-28 16:59:55,247 [wrapper] Test setup, not cleaning
[2025-07-28 12:59:55] 2025-07-28 16:59:55,251 [wrapper] apfmon messages muted
[2025-07-28 12:59:55] 2025-07-28 16:59:55,255 [wrapper] ==== wrapper stdout END ====
[2025-07-28 12:59:55] 2025-07-28 16:59:55,259 [wrapper] ==== wrapper stderr END ====
[2025-07-28 12:59:55]  *** Error codes and diagnostics ***
[2025-07-28 12:59:55]     "exeErrorCode": 0,
[2025-07-28 12:59:55]     "exeErrorDiag": "",
[2025-07-28 12:59:55]     "pilotErrorCode": 0,
[2025-07-28 12:59:55]     "pilotErrorDiag": "",
[2025-07-28 12:59:55]  *** Listing of results directory ***
[2025-07-28 12:59:55] total 476164
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas    530466 Jul 28 11:02 pilot3.tar.gz
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas      5112 Jul 28 11:27 queuedata.json
[2025-07-28 12:59:55] -rwx------ 1 boincer umatlas     36292 Jul 28 11:28 runpilot2-wrapper.sh
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas       100 Jul 28 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 12:59:55] -rwxr-xr-x 1 boincer umatlas      7986 Jul 28 11:28 run_atlas
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas       105 Jul 28 11:28 job.xml
[2025-07-28 12:59:55] -rw-r--r-- 2 boincer umatlas 267843802 Jul 28 11:28 EVNT.45803661._000004.pool.root.1
[2025-07-28 12:59:55] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 11:28 start_atlas.sh
[2025-07-28 12:59:55] drwxrwx--x 2 boincer umatlas      4096 Jul 28 11:28 shared
[2025-07-28 12:59:55] -rw-r--r-- 2 boincer umatlas    542872 Jul 28 11:28 input.tar.gz
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas         0 Jul 28 11:28 boinc_lockfile
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas      2508 Jul 28 11:28 pandaJob.out
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas    977006 Jul 28 11:29 agis_schedconf.cvmfs.json
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas   1589827 Jul 28 11:29 agis_ddmendpoints.agis.ALL.json
[2025-07-28 12:59:55] drwx------ 4 boincer umatlas      4096 Jul 28 11:29 pilot3
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas      5868 Jul 28 12:55 init_data.xml
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas 214107106 Jul 28 12:58 HITS.45803666._000095.pool.root.1
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas       529 Jul 28 12:59 boinc_task_state.xml
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas      1047 Jul 28 12:59 memory_monitor_summary.json
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas    378355 Jul 28 12:59 log.45803666._000095.job.log.tgz.1
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas        95 Jul 28 12:59 pilot_heartbeat.json
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas      7839 Jul 28 12:59 heartbeat.json
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas        27 Jul 28 12:59 wrapper_checkpoint.txt
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas      8192 Jul 28 12:59 boinc_mmap_file
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas       744 Jul 28 12:59 pilotlog.txt
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas    508413 Jul 28 12:59 log.45803666._000095.job.log.1
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas       357 Jul 28 12:59 output.list
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas       620 Jul 28 12:59 runtime_log
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas    901120 Jul 28 12:59 result.tar.gz
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas      8662 Jul 28 12:59 runtime_log.err
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas       660 Jul 28 12:59 0pONDmpwe07n9Rq4apOajLDm4fhM0noT9bVof3QYDmRF3KDmnbCRsm.diag
[2025-07-28 12:59:55] -rw-r--r-- 1 boincer umatlas     21723 Jul 28 12:59 stderr.txt
[2025-07-28 12:59:55] HITS file was successfully produced:
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas 214107106 Jul 28 12:58 shared/HITS.pool.root.1
[2025-07-28 12:59:55]  *** Contents of shared directory: ***
[2025-07-28 12:59:55] total 472092
[2025-07-28 12:59:55] -rw-r--r-- 2 boincer umatlas 267843802 Jul 28 11:28 ATLAS.root_0
[2025-07-28 12:59:55] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 11:28 start_atlas.sh
[2025-07-28 12:59:55] -rw-r--r-- 2 boincer umatlas    542872 Jul 28 11:28 input.tar.gz
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas 214107106 Jul 28 12:58 HITS.pool.root.1
[2025-07-28 12:59:55] -rw------- 1 boincer umatlas    901120 Jul 28 12:59 result.tar.gz
12:59:57 (30504): run_atlas exited; CPU time 58414.826439
12:59:57 (30504): called boinc_finish(0)

</stderr_txt>
]]>

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