Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:38:19 (3727880): wrapper (7.7.26015): starting
13:38:19 (3727880): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 13:38:19] Arguments: --nthreads 12
[2025-07-28 13:38:19] Threads: 12
[2025-07-28 13:38:19] Checking for CVMFS
[2025-07-28 13:38:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 13:38:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 13:38:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 13:38:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 13:38:19] 2.12.6.0 2624825 20114 352348 148857 1 616 28896945 40960000 10226 16776704 0 61098413 99.770 57067467 31052 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 13:38:19] CVMFS is ok
[2025-07-28 13:38:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 13:38:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 13:38:19] Further information can be found at the LHC@home message board.
[2025-07-28 13:38:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 13:38:19] Checking for apptainer binary...
[2025-07-28 13:38:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 13:38:19] Running /usr/bin/apptainer --version
[2025-07-28 13:38:19] apptainer version 1.4.1-1.el9
[2025-07-28 13:38:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 13:38:20] c6-8-12-1.aglt2.org
[2025-07-28 13:38:20] apptainer works
[2025-07-28 13:38:20] Set ATHENA_PROC_NUMBER=12
[2025-07-28 13:38:20] Set ATHENA_CORE_NUMBER=12
[2025-07-28 13:38:20] Starting ATLAS job with PandaID=6748782640
[2025-07-28 13:38:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 15:42:46]  *** The last 200 lines of the pilot log: ***
[2025-07-28 15:42:46] 2025-07-28 19:42:13,354 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748782640/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 15:42:46] 2025-07-28 19:42:13,355 | INFO     | extracted standard info from prmon json
[2025-07-28 15:42:46] 2025-07-28 19:42:13,355 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 15:42:46] 2025-07-28 19:42:13,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 15:42:46] 2025-07-28 19:42:13,356 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 15:42:46] 2025-07-28 19:42:13,356 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 15:42:46] 2025-07-28 19:42:13,359 | INFO     | fitting pss+swap vs Time
[2025-07-28 15:42:46] 2025-07-28 19:42:13,359 | INFO     | sum of square deviations: 549314157.4710754
[2025-07-28 15:42:46] 2025-07-28 19:42:13,360 | INFO     | sum of deviations: 4868765301.694213
[2025-07-28 15:42:46] 2025-07-28 19:42:13,360 | INFO     | mean x: 1753728003.0661156
[2025-07-28 15:42:46] 2025-07-28 19:42:13,360 | INFO     | mean y: 2403630.4132231404
[2025-07-28 15:42:46] 2025-07-28 19:42:13,360 | INFO     | -- intersect: -15541506778.244661
[2025-07-28 15:42:46] 2025-07-28 19:42:13,361 | INFO     | intersect: -15541506778.244661
[2025-07-28 15:42:46] 2025-07-28 19:42:13,361 | INFO     | chi2: 1.829854362437018
[2025-07-28 15:42:46] 2025-07-28 19:42:13,361 | INFO     | sum of square deviations: 483994442.44827604
[2025-07-28 15:42:46] 2025-07-28 19:42:13,361 | INFO     | sum of deviations: 6669511034.672425
[2025-07-28 15:42:46] 2025-07-28 19:42:13,362 | INFO     | mean x: 1753727850.5689654
[2025-07-28 15:42:46] 2025-07-28 19:42:13,362 | INFO     | mean y: 2407783.353448276
[2025-07-28 15:42:46] 2025-07-28 19:42:13,362 | INFO     | -- intersect: -24164207006.7163
[2025-07-28 15:42:46] 2025-07-28 19:42:13,362 | INFO     | intersect: -24164207006.7163
[2025-07-28 15:42:46] 2025-07-28 19:42:13,362 | INFO     | chi2: 1.8239081461910613
[2025-07-28 15:42:46] 2025-07-28 19:42:13,362 | INFO     | current chi2=1.8239081461910613 (change=0.3249557105756479 %)
[2025-07-28 15:42:46] 2025-07-28 19:42:13,362 | INFO     | right removable region: 115
[2025-07-28 15:42:46] 2025-07-28 19:42:13,362 | INFO     | sum of square deviations: 483989562.44827604
[2025-07-28 15:42:46] 2025-07-28 19:42:13,363 | INFO     | sum of deviations: -14728018251.224144
[2025-07-28 15:42:46] 2025-07-28 19:42:13,363 | INFO     | mean x: 1753728155.5689654
[2025-07-28 15:42:46] 2025-07-28 19:42:13,363 | INFO     | mean y: 2448757.2155172415
[2025-07-28 15:42:46] 2025-07-28 19:42:13,363 | INFO     | -- intersect: 53369178717.772705
[2025-07-28 15:42:46] 2025-07-28 19:42:13,363 | INFO     | intersect: 53369178717.772705
[2025-07-28 15:42:46] 2025-07-28 19:42:13,363 | INFO     | chi2: 0.2604577628056429
[2025-07-28 15:42:46] 2025-07-28 19:42:13,363 | INFO     | current chi2=0.2604577628056429 (change=85.76620259227829 %)
[2025-07-28 15:42:46] 2025-07-28 19:42:13,364 | INFO     | sum of square deviations: 424060417.4234224
[2025-07-28 15:42:46] 2025-07-28 19:42:13,364 | INFO     | sum of deviations: -14733819480.900913
[2025-07-28 15:42:46] 2025-07-28 19:42:13,364 | INFO     | mean x: 1753728308.072072
[2025-07-28 15:42:46] 2025-07-28 19:42:13,364 | INFO     | mean y: 2448525.6126126125
[2025-07-28 15:42:46] 2025-07-28 19:42:13,364 | INFO     | -- intersect: 60935078047.31459
[2025-07-28 15:42:46] 2025-07-28 19:42:13,364 | INFO     | intersect: 60935078047.31459
[2025-07-28 15:42:46] 2025-07-28 19:42:13,364 | INFO     | chi2: 0.19999010467334397
[2025-07-28 15:42:46] 2025-07-28 19:42:13,365 | INFO     | current chi2=0.19999010467334397 (change=23.21591703811905 %)
[2025-07-28 15:42:46] 2025-07-28 19:42:13,365 | INFO     | left removable region: 20
[2025-07-28 15:42:46] 2025-07-28 19:42:13,365 | INFO     | sum of square deviations: 265841545.32631594
[2025-07-28 15:42:46] 2025-07-28 19:42:13,365 | INFO     | sum of deviations: -3118352542.6210527
[2025-07-28 15:42:46] 2025-07-28 19:42:13,365 | INFO     | mean x: 1753728430.0842106
[2025-07-28 15:42:46] 2025-07-28 19:42:13,365 | INFO     | mean y: 2424935.452631579
[2025-07-28 15:42:46] 2025-07-28 19:42:13,365 | INFO     | -- intersect: 20573865348.602264
[2025-07-28 15:42:46] 2025-07-28 19:42:13,365 | INFO     | intersect: 20573865348.602264
[2025-07-28 15:42:46] 2025-07-28 19:42:13,365 | INFO     | chi2: 0.11044241211158812
[2025-07-28 15:42:46] 2025-07-28 19:42:13,366 | INFO     | -- intersect: 20573865348.602264
[2025-07-28 15:42:46] 2025-07-28 19:42:13,366 | INFO     | current memory leak: -11.73 B/s (using 95 data points, chi2=0.11)
[2025-07-28 15:42:46] 2025-07-28 19:42:13,366 | INFO     | could have reported an average CPU frequency of 2626 MHz (8 samples)
[2025-07-28 15:42:46] 2025-07-28 19:42:13,366 | INFO     | ..............................
[2025-07-28 15:42:46] 2025-07-28 19:42:13,366 | INFO     | . Timing measurements:
[2025-07-28 15:42:46] 2025-07-28 19:42:13,366 | INFO     | . get job = 0 s
[2025-07-28 15:42:46] 2025-07-28 19:42:13,367 | INFO     | . initial setup = 2 s
[2025-07-28 15:42:46] 2025-07-28 19:42:13,367 | INFO     | . payload setup = 8 s
[2025-07-28 15:42:46] 2025-07-28 19:42:13,367 | INFO     | . stage-in = 0 s
[2025-07-28 15:42:46] 2025-07-28 19:42:13,367 | INFO     | . payload execution = 7382 s
[2025-07-28 15:42:46] 2025-07-28 19:42:13,367 | INFO     | . stage-out = 0 s
[2025-07-28 15:42:46] 2025-07-28 19:42:13,367 | INFO     | . log creation = 0 s
[2025-07-28 15:42:46] 2025-07-28 19:42:13,367 | INFO     | ..............................
[2025-07-28 15:42:46] 2025-07-28 19:42:13,464 | INFO     | 
[2025-07-28 15:42:46] 2025-07-28 19:42:13,469 | INFO     | job summary report
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | --------------------------------------------------
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | PanDA job id: 6748782640
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | task id: 45803666
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | errors: (none)
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | pilot state: finished 
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | transexitcode: 0
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | exeerrorcode: 0
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | exeerrordiag: 
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | exitcode: 0
[2025-07-28 15:42:46] 2025-07-28 19:42:13,470 | INFO     | exitmsg: OK
[2025-07-28 15:42:46] 2025-07-28 19:42:13,474 | INFO     | cpuconsumptiontime: 54203 s
[2025-07-28 15:42:46] 2025-07-28 19:42:13,474 | INFO     | nevents: 400
[2025-07-28 15:42:46] 2025-07-28 19:42:13,474 | INFO     | neventsw: 0
[2025-07-28 15:42:46] 2025-07-28 19:42:13,474 | INFO     | pid: 3738901
[2025-07-28 15:42:46] 2025-07-28 19:42:13,474 | INFO     | pgrp: 3738901
[2025-07-28 15:42:46] 2025-07-28 19:42:13,474 | INFO     | corecount: 12
[2025-07-28 15:42:46] 2025-07-28 19:42:13,474 | INFO     | event service: False
[2025-07-28 15:42:46] 2025-07-28 19:42:13,474 | INFO     | sizes: {0: 2391831, 1: 2391831, 6: 2392121, 11: 2392149, 7394: 2419491, 7395: 2428489, 7399: 2428673, 7405: 2429023}
[2025-07-28 15:42:46] 2025-07-28 19:42:13,474 | INFO     | --------------------------------------------------
[2025-07-28 15:42:46] 2025-07-28 19:42:13,474 | INFO     | 
[2025-07-28 15:42:46] 2025-07-28 19:42:13,475 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 15:42:46] 2025-07-28 19:42:13,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 15:42:46] 2025-07-28 19:42:13,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 15:42:46] 2025-07-28 19:42:13,516 | INFO     | job 6748782640 has completed (purged errors)
[2025-07-28 15:42:46] 2025-07-28 19:42:13,517 | INFO     | overall cleanup function is called
[2025-07-28 15:42:46] 2025-07-28 19:42:14,123 | INFO     | number of running child processes to parent process 3738901: 1
[2025-07-28 15:42:46] 2025-07-28 19:42:14,123 | INFO     | maximum number of monitored processes: 6
[2025-07-28 15:42:46] 2025-07-28 19:42:14,124 | INFO     | aborting job monitoring since job object (job id=6748782640) has expired
[2025-07-28 15:42:46] 2025-07-28 19:42:14,191 | INFO     | PID=3731462 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 15:42:46] 2025-07-28 19:42:14,192 | INFO     | .. there are 13 such processes running
[2025-07-28 15:42:46] 2025-07-28 19:42:14,530 | INFO     | --- collectZombieJob: --- 10, [3738901]
[2025-07-28 15:42:46] 2025-07-28 19:42:14,530 | INFO     | zombie collector waiting for pid 3738901
[2025-07-28 15:42:46] 2025-07-28 19:42:14,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 15:42:46] 2025-07-28 19:42:14,531 | INFO     | collected zombie processes
[2025-07-28 15:42:46] 2025-07-28 19:42:14,531 | INFO     | will attempt to kill all subprocesses of pid=3738901
[2025-07-28 15:42:46] 2025-07-28 19:42:14,799 | INFO     | process IDs to be killed: [3738901] (in reverse order)
[2025-07-28 15:42:46] 2025-07-28 19:42:14,888 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 15:42:46] 2025-07-28 19:42:14,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 15:42:46] 2025-07-28 19:42:14,902 | INFO     | did not find any defunct processes belonging to 3738901
[2025-07-28 15:42:46] 2025-07-28 19:42:14,915 | INFO     | did not find any defunct processes belonging to 3738901
[2025-07-28 15:42:46] 2025-07-28 19:42:14,915 | INFO     | ready for new job
[2025-07-28 15:42:46] 2025-07-28 19:42:14,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 15:42:46] 2025-07-28 19:42:14,918 | INFO     | ***************************************
[2025-07-28 15:42:46] 2025-07-28 19:42:14,918 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 15:42:46] 2025-07-28 19:42:14,918 | INFO     | ***************************************
[2025-07-28 15:42:46] 2025-07-28 19:42:14,918 | INFO     | 
[2025-07-28 15:42:46] 2025-07-28 19:42:14,934 | INFO     | architecture information:
[2025-07-28 15:42:46] 2025-07-28 19:42:14,935 | INFO     | executing command: cat /etc/os-release
[2025-07-28 15:42:46] 2025-07-28 19:42:14,952 | INFO     | cat /etc/os-release:
[2025-07-28 15:42:46] NAME="CentOS Linux"
[2025-07-28 15:42:46] VERSION="7 (Core)"
[2025-07-28 15:42:46] ID="centos"
[2025-07-28 15:42:46] ID_LIKE="rhel fedora"
[2025-07-28 15:42:46] VERSION_ID="7"
[2025-07-28 15:42:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 15:42:46] ANSI_COLOR="0;31"
[2025-07-28 15:42:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 15:42:46] HOME_URL="https://www.centos.org/"
[2025-07-28 15:42:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 15:42:46] 
[2025-07-28 15:42:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 15:42:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 15:42:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 15:42:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 15:42:46] 
[2025-07-28 15:42:46] 2025-07-28 19:42:14,952 | INFO     | ***************************************
[2025-07-28 15:42:46] 2025-07-28 19:42:15,455 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 15:42:46] 2025-07-28 19:42:15,480 | INFO     | sufficient remaining disk space (58713964544 B)
[2025-07-28 15:42:46] 2025-07-28 19:42:15,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 15:42:46] 2025-07-28 19:42:15,480 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 15:42:46] 2025-07-28 19:42:15,480 | INFO     | update_server=False
[2025-07-28 15:42:46] 2025-07-28 19:42:15,481 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 15:42:46] 2025-07-28 19:42:15,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 15:42:46] 2025-07-28 19:42:15,481 | INFO     | aborting loop
[2025-07-28 15:42:46] 2025-07-28 19:42:15,966 | INFO     | all payload control threads have been joined
[2025-07-28 15:42:46] 2025-07-28 19:42:16,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 15:42:46] 2025-07-28 19:42:16,392 | INFO     | all data control threads have been joined
[2025-07-28 15:42:46] 2025-07-28 19:42:16,451 | INFO     | all job control threads have been joined
[2025-07-28 15:42:46] 2025-07-28 19:42:16,486 | INFO     | [job] retrieve thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:16,488 | INFO     | [job] job monitor thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:16,620 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:16,756 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:16,788 | INFO     | [payload] failed_post thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:16,971 | INFO     | [payload] control thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:17,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 15:42:46] 2025-07-28 19:42:17,181 | INFO     | [data] copytool_in thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:17,398 | INFO     | [data] control thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:17,457 | INFO     | [job] control thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:17,644 | INFO     | [payload] validate_post thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:17,790 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:17,817 | INFO     | [job] validate thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:18,294 | INFO     | [data] copytool_out thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:18,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 15:42:46] 2025-07-28 19:42:19,476 | INFO     | [job] queue monitor thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:21,017 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:26,445 | INFO     | job.realtimelogging is not enabled
[2025-07-28 15:42:46] 2025-07-28 19:42:27,450 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 15:42:46] 2025-07-28 19:42:28,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640213235520)>', '<ExcThread(monitor, started 139639570552576)>']
[2025-07-28 15:42:46] 2025-07-28 19:42:33,542 | INFO     | all workflow threads have been joined
[2025-07-28 15:42:46] 2025-07-28 19:42:33,542 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 15:42:46] 2025-07-28 19:42:33,542 | INFO     | traces error code: 0
[2025-07-28 15:42:46] 2025-07-28 19:42:33,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 15:42:46] 2025-07-28 19:42:46,585 | INFO     | PID=3731462 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 15:42:46] 2025-07-28 19:42:46,585 | INFO     | .. there are 13 such processes running
[2025-07-28 15:42:46] 2025-07-28 19:42:46,586 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 15:42:46] 2025-07-28 19:42:46,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 15:42:46] 2025-07-28 19:42:46,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 15:42:46] 2025-07-28 19:42:46,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 15:42:46] 2025-07-28 19:42:46,586 | INFO     | [monitor] control thread has ended
[2025-07-28 15:42:46] 2025-07-28 19:42:46,772 [wrapper] ==== pilot stdout END ====
[2025-07-28 15:42:46] 2025-07-28 19:42:46,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 15:42:46] 2025-07-28 19:42:46,781 [wrapper] pilotpid: 3731462
[2025-07-28 15:42:46] 2025-07-28 19:42:46,785 [wrapper] Pilot exit status: 0
[2025-07-28 15:42:46] 2025-07-28 19:42:46,803 [wrapper] pandaids: 6748782640
[2025-07-28 15:42:46] 2025-07-28 19:42:46,866 [wrapper] cleanup supervisor_pilot 4066618 3731463
[2025-07-28 15:42:46] 2025-07-28 19:42:46,870 [wrapper] Test setup, not cleaning
[2025-07-28 15:42:46] 2025-07-28 19:42:46,875 [wrapper] apfmon messages muted
[2025-07-28 15:42:46] 2025-07-28 19:42:46,881 [wrapper] ==== wrapper stdout END ====
[2025-07-28 15:42:46] 2025-07-28 19:42:46,887 [wrapper] ==== wrapper stderr END ====
[2025-07-28 15:42:46]  *** Error codes and diagnostics ***
[2025-07-28 15:42:46]     "exeErrorCode": 0,
[2025-07-28 15:42:46]     "exeErrorDiag": "",
[2025-07-28 15:42:46]     "pilotErrorCode": 0,
[2025-07-28 15:42:46]     "pilotErrorDiag": "",
[2025-07-28 15:42:46]  *** Listing of results directory ***
[2025-07-28 15:42:46] total 477808
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas    530466 Jul 28 11:02 pilot3.tar.gz
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas      5112 Jul 28 11:27 queuedata.json
[2025-07-28 15:42:46] -rwx------. 1 boincer umatlas     36292 Jul 28 11:28 runpilot2-wrapper.sh
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas       100 Jul 28 13:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 15:42:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 13:38 run_atlas
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas       105 Jul 28 13:38 job.xml
[2025-07-28 15:42:46] -rw-r--r--. 2 boincer umatlas 272419702 Jul 28 13:38 EVNT.45803661._000005.pool.root.1
[2025-07-28 15:42:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 13:38 start_atlas.sh
[2025-07-28 15:42:46] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 13:38 shared
[2025-07-28 15:42:46] -rw-r--r--. 2 boincer umatlas    542865 Jul 28 13:38 input.tar.gz
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas         0 Jul 28 13:38 boinc_lockfile
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas      2510 Jul 28 13:38 pandaJob.out
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas    977348 Jul 28 13:38 agis_schedconf.cvmfs.json
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas   1589827 Jul 28 13:38 agis_ddmendpoints.agis.ALL.json
[2025-07-28 15:42:46] drwx------. 4 boincer umatlas      4096 Jul 28 13:38 pilot3
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas      6842 Jul 28 15:39 init_data.xml
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas 210820520 Jul 28 15:41 HITS.45803666._000122.pool.root.1
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas       530 Jul 28 15:41 boinc_task_state.xml
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas      1038 Jul 28 15:41 memory_monitor_summary.json
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas    403970 Jul 28 15:42 log.45803666._000122.job.log.tgz.1
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas      7809 Jul 28 15:42 heartbeat.json
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 15:42 boinc_mmap_file
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas        27 Jul 28 15:42 wrapper_checkpoint.txt
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas        95 Jul 28 15:42 pilot_heartbeat.json
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas       823 Jul 28 15:42 pilotlog.txt
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas    679143 Jul 28 15:42 log.45803666._000122.job.log.1
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas       357 Jul 28 15:42 output.list
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas       620 Jul 28 15:42 runtime_log
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas   1105920 Jul 28 15:42 result.tar.gz
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 15:42 runtime_log.err
[2025-07-28 15:42:46] -rw-------. 1 boincer umatlas       656 Jul 28 15:42 gf6LDm1we07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYfWLDm0ZjWIo.diag
[2025-07-28 15:42:46] -rw-r--r--. 1 boincer umatlas     21279 Jul 28 15:42 stderr.txt
[2025-07-28 15:42:47] HITS file was successfully produced:
[2025-07-28 15:42:47] -rw-------. 1 boincer umatlas 210820520 Jul 28 15:41 shared/HITS.pool.root.1
[2025-07-28 15:42:47]  *** Contents of shared directory: ***
[2025-07-28 15:42:47] total 473548
[2025-07-28 15:42:47] -rw-r--r--. 2 boincer umatlas 272419702 Jul 28 13:38 ATLAS.root_0
[2025-07-28 15:42:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 13:38 start_atlas.sh
[2025-07-28 15:42:47] -rw-r--r--. 2 boincer umatlas    542865 Jul 28 13:38 input.tar.gz
[2025-07-28 15:42:47] -rw-------. 1 boincer umatlas 210820520 Jul 28 15:41 HITS.pool.root.1
[2025-07-28 15:42:47] -rw-------. 1 boincer umatlas   1105920 Jul 28 15:42 result.tar.gz
15:42:49 (3727880): run_atlas exited; CPU time 54331.152864
15:42:49 (3727880): called boinc_finish(0)

</stderr_txt>
]]>

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