Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:28:44 (3234786): wrapper (7.7.26015): starting
11:28:44 (3234786): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 11:28:44] Arguments: --nthreads 12
[2025-07-28 11:28:44] Threads: 12
[2025-07-28 11:28:44] Checking for CVMFS
[2025-07-28 11:28:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 11:28:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 11:28:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 11:28:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 11:28:45] 2.12.6.0 2624825 19984 342944 148853 2 332 27573077 40960001 9943 16776704 0 60867135 99.771 56535677 31078 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 11:28:45] CVMFS is ok
[2025-07-28 11:28:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 11:28:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 11:28:45] Further information can be found at the LHC@home message board.
[2025-07-28 11:28:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 11:28:45] Checking for apptainer binary...
[2025-07-28 11:28:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 11:28:45] Running /usr/bin/apptainer --version
[2025-07-28 11:28:45] apptainer version 1.4.1-1.el9
[2025-07-28 11:28:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 11:28:45] c6-8-12-1.aglt2.org
[2025-07-28 11:28:45] apptainer works
[2025-07-28 11:28:45] Set ATHENA_PROC_NUMBER=12
[2025-07-28 11:28:45] Set ATHENA_CORE_NUMBER=12
[2025-07-28 11:28:45] Starting ATLAS job with PandaID=6748782641
[2025-07-28 11:28:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 13:38:13]  *** The last 200 lines of the pilot log: ***
[2025-07-28 13:38:13] 2025-07-28 17:37:37,109 | INFO     | monitor loop #535: job 0:6748782641 is in state 'finished'
[2025-07-28 13:38:13] 2025-07-28 17:37:37,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 13:38:13] 2025-07-28 17:37:39,575 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 13:38:13] 2025-07-28 17:37:39,583 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2764.688785714284
[2025-07-28 13:38:13] 2025-07-28 17:37:39,592 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748782641/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 13:38:13] 2025-07-28 17:37:39,592 | INFO     | extracted standard info from prmon json
[2025-07-28 13:38:13] 2025-07-28 17:37:39,593 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 13:38:13] 2025-07-28 17:37:39,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 13:38:13] 2025-07-28 17:37:39,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 13:38:13] 2025-07-28 17:37:39,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 13:38:13] 2025-07-28 17:37:39,595 | INFO     | fitting pss+swap vs Time
[2025-07-28 13:38:13] 2025-07-28 17:37:39,596 | INFO     | sum of square deviations: 620244681.2142874
[2025-07-28 13:38:13] 2025-07-28 17:37:39,596 | INFO     | sum of deviations: -3042797118.428572
[2025-07-28 13:38:13] 2025-07-28 17:37:39,596 | INFO     | mean x: 1753720385.547619
[2025-07-28 13:38:13] 2025-07-28 17:37:39,597 | INFO     | mean y: 2426194.904761905
[2025-07-28 13:38:13] 2025-07-28 17:37:39,597 | INFO     | -- intersect: 8605829814.951508
[2025-07-28 13:38:13] 2025-07-28 17:37:39,597 | INFO     | intersect: 8605829814.951508
[2025-07-28 13:38:13] 2025-07-28 17:37:39,597 | INFO     | chi2: 1.8571613335676367
[2025-07-28 13:38:13] 2025-07-28 17:37:39,597 | INFO     | sum of square deviations: 549296343.7024808
[2025-07-28 13:38:13] 2025-07-28 17:37:39,597 | INFO     | sum of deviations: -3196172372.132227
[2025-07-28 13:38:13] 2025-07-28 17:37:39,597 | INFO     | mean x: 1753720233.0495868
[2025-07-28 13:38:13] 2025-07-28 17:37:39,597 | INFO     | mean y: 2425843.355371901
[2025-07-28 13:38:13] 2025-07-28 17:37:39,597 | INFO     | -- intersect: 10206739455.823833
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | intersect: 10206739455.823833
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | chi2: 1.8525970212125098
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | current chi2=1.8525970212125098 (change=0.24576822016635302 %)
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | right removable region: 120
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | sum of square deviations: 549292683.7024808
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | sum of deviations: -22831160657.909092
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | mean x: 1753720538.0495868
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | mean y: 2468104.8181818184
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | -- intersect: 72895256487.50833
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | intersect: 72895256487.50833
[2025-07-28 13:38:13] 2025-07-28 17:37:39,598 | INFO     | chi2: 0.2922429807560978
[2025-07-28 13:38:13] 2025-07-28 17:37:39,599 | INFO     | current chi2=0.2922429807560978 (change=84.2639960527988 %)
[2025-07-28 13:38:13] 2025-07-28 17:37:39,599 | INFO     | sum of square deviations: 483968698.68965524
[2025-07-28 13:38:13] 2025-07-28 17:37:39,599 | INFO     | sum of deviations: -20066541762.103447
[2025-07-28 13:38:13] 2025-07-28 17:37:39,599 | INFO     | mean x: 1753720690.5517242
[2025-07-28 13:38:13] 2025-07-28 17:37:39,599 | INFO     | mean y: 2461478.7672413792
[2025-07-28 13:38:13] 2025-07-28 17:37:39,599 | INFO     | -- intersect: 72716067898.56456
[2025-07-28 13:38:13] 2025-07-28 17:37:39,599 | INFO     | intersect: 72716067898.56456
[2025-07-28 13:38:13] 2025-07-28 17:37:39,599 | INFO     | chi2: 0.2614408506189148
[2025-07-28 13:38:13] 2025-07-28 17:37:39,599 | INFO     | current chi2=0.2614408506189148 (change=10.539904177507015 %)
[2025-07-28 13:38:13] 2025-07-28 17:37:39,599 | INFO     | left removable region: 20
[2025-07-28 13:38:13] 2025-07-28 17:37:39,600 | INFO     | sum of square deviations: 310047694.6400005
[2025-07-28 13:38:13] 2025-07-28 17:37:39,600 | INFO     | sum of deviations: -7342012107.879999
[2025-07-28 13:38:13] 2025-07-28 17:37:39,600 | INFO     | mean x: 1753720812.56
[2025-07-28 13:38:13] 2025-07-28 17:37:39,600 | INFO     | mean y: 2427417.48
[2025-07-28 13:38:13] 2025-07-28 17:37:39,600 | INFO     | -- intersect: 41531004027.62682
[2025-07-28 13:38:13] 2025-07-28 17:37:39,600 | INFO     | intersect: 41531004027.62682
[2025-07-28 13:38:13] 2025-07-28 17:37:39,600 | INFO     | chi2: 0.14851766974310193
[2025-07-28 13:38:13] 2025-07-28 17:37:39,600 | INFO     | -- intersect: 41531004027.62682
[2025-07-28 13:38:13] 2025-07-28 17:37:39,600 | INFO     | current memory leak: -23.68 B/s (using 100 data points, chi2=0.15)
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | could have reported an average CPU frequency of 2609 MHz (8 samples)
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | ..............................
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | . Timing measurements:
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | . get job = 0 s
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | . initial setup = 2 s
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | . payload setup = 9 s
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | . stage-in = 0 s
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | . payload execution = 7679 s
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | . stage-out = 0 s
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | . log creation = 0 s
[2025-07-28 13:38:13] 2025-07-28 17:37:39,601 | INFO     | ..............................
[2025-07-28 13:38:13] 2025-07-28 17:37:39,745 | INFO     | 
[2025-07-28 13:38:13] 2025-07-28 17:37:39,745 | INFO     | job summary report
[2025-07-28 13:38:13] 2025-07-28 17:37:39,745 | INFO     | --------------------------------------------------
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | PanDA job id: 6748782641
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | task id: 45803666
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | errors: (none)
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | pilot state: finished 
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | transexitcode: 0
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | exeerrorcode: 0
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | exeerrordiag: 
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | exitcode: 0
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | exitmsg: OK
[2025-07-28 13:38:13] 2025-07-28 17:37:39,746 | INFO     | cpuconsumptiontime: 54989 s
[2025-07-28 13:38:13] 2025-07-28 17:37:39,747 | INFO     | nevents: 400
[2025-07-28 13:38:13] 2025-07-28 17:37:39,747 | INFO     | neventsw: 0
[2025-07-28 13:38:13] 2025-07-28 17:37:39,747 | INFO     | pid: 3247194
[2025-07-28 13:38:13] 2025-07-28 17:37:39,747 | INFO     | pgrp: 3247194
[2025-07-28 13:38:13] 2025-07-28 17:37:39,747 | INFO     | corecount: 12
[2025-07-28 13:38:13] 2025-07-28 17:37:39,747 | INFO     | event service: False
[2025-07-28 13:38:13] 2025-07-28 17:37:39,747 | INFO     | sizes: {0: 2391831, 7: 2392093, 11: 2392121, 7692: 2419703, 7694: 2428701, 7697: 2428757, 7702: 2429079}
[2025-07-28 13:38:13] 2025-07-28 17:37:39,747 | INFO     | --------------------------------------------------
[2025-07-28 13:38:13] 2025-07-28 17:37:39,747 | INFO     | 
[2025-07-28 13:38:13] 2025-07-28 17:37:39,747 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 13:38:13] 2025-07-28 17:37:39,774 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,776 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,776 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 13:38:13] 2025-07-28 17:37:39,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,776 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 13:38:13] 2025-07-28 17:37:39,776 | INFO     | job 6748782641 has completed (purged errors)
[2025-07-28 13:38:13] 2025-07-28 17:37:39,777 | INFO     | overall cleanup function is called
[2025-07-28 13:38:13] 2025-07-28 17:37:40,784 | INFO     | --- collectZombieJob: --- 10, [3247194]
[2025-07-28 13:38:13] 2025-07-28 17:37:40,785 | INFO     | zombie collector waiting for pid 3247194
[2025-07-28 13:38:13] 2025-07-28 17:37:40,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 13:38:13] 2025-07-28 17:37:40,785 | INFO     | collected zombie processes
[2025-07-28 13:38:13] 2025-07-28 17:37:40,785 | INFO     | will attempt to kill all subprocesses of pid=3247194
[2025-07-28 13:38:13] 2025-07-28 17:37:41,057 | INFO     | process IDs to be killed: [3247194] (in reverse order)
[2025-07-28 13:38:13] 2025-07-28 17:37:41,153 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 13:38:13] 2025-07-28 17:37:41,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 13:38:13] 2025-07-28 17:37:41,165 | INFO     | did not find any defunct processes belonging to 3247194
[2025-07-28 13:38:13] 2025-07-28 17:37:41,175 | INFO     | did not find any defunct processes belonging to 3247194
[2025-07-28 13:38:13] 2025-07-28 17:37:41,175 | INFO     | ready for new job
[2025-07-28 13:38:13] 2025-07-28 17:37:41,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 13:38:13] 2025-07-28 17:37:41,177 | INFO     | ***************************************
[2025-07-28 13:38:13] 2025-07-28 17:37:41,178 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 13:38:13] 2025-07-28 17:37:41,178 | INFO     | ***************************************
[2025-07-28 13:38:13] 2025-07-28 17:37:41,178 | INFO     | 
[2025-07-28 13:38:13] 2025-07-28 17:37:41,192 | INFO     | architecture information:
[2025-07-28 13:38:13] 2025-07-28 17:37:41,193 | INFO     | executing command: cat /etc/os-release
[2025-07-28 13:38:13] 2025-07-28 17:37:41,208 | INFO     | cat /etc/os-release:
[2025-07-28 13:38:13] NAME="CentOS Linux"
[2025-07-28 13:38:13] VERSION="7 (Core)"
[2025-07-28 13:38:13] ID="centos"
[2025-07-28 13:38:13] ID_LIKE="rhel fedora"
[2025-07-28 13:38:13] VERSION_ID="7"
[2025-07-28 13:38:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 13:38:13] ANSI_COLOR="0;31"
[2025-07-28 13:38:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 13:38:13] HOME_URL="https://www.centos.org/"
[2025-07-28 13:38:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 13:38:13] 
[2025-07-28 13:38:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 13:38:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 13:38:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 13:38:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 13:38:13] 
[2025-07-28 13:38:13] 2025-07-28 17:37:41,208 | INFO     | ***************************************
[2025-07-28 13:38:13] 2025-07-28 17:37:41,711 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 13:38:13] 2025-07-28 17:37:41,729 | INFO     | sufficient remaining disk space (58442383360 B)
[2025-07-28 13:38:13] 2025-07-28 17:37:41,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 13:38:13] 2025-07-28 17:37:41,729 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 13:38:13] 2025-07-28 17:37:41,730 | INFO     | update_server=False
[2025-07-28 13:38:13] 2025-07-28 17:37:41,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 13:38:13] 2025-07-28 17:37:41,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 13:38:13] 2025-07-28 17:37:42,122 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 13:38:13] 2025-07-28 17:37:42,122 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 13:38:13] 2025-07-28 17:37:42,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:38:13] 2025-07-28 17:37:42,126 | INFO     | will abort loop
[2025-07-28 13:38:13] 2025-07-28 17:37:42,305 | INFO     | all data control threads have been joined
[2025-07-28 13:38:13] 2025-07-28 17:37:42,538 | INFO     | all payload control threads have been joined
[2025-07-28 13:38:13] 2025-07-28 17:37:42,735 | INFO     | [job] retrieve thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:42,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 13:38:13] 2025-07-28 17:37:43,010 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:43,045 | INFO     | all job control threads have been joined
[2025-07-28 13:38:13] 2025-07-28 17:37:43,132 | INFO     | [job] job monitor thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:43,196 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:43,236 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:43,243 | INFO     | [data] copytool_in thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:43,310 | INFO     | [data] control thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:43,321 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:43,411 | INFO     | [job] validate thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:43,544 | INFO     | [payload] control thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:43,900 | INFO     | [payload] validate_post thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:44,051 | INFO     | [job] control thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:44,310 | INFO     | [payload] failed_post thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:44,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:38:13] 2025-07-28 17:37:44,792 | INFO     | [data] copytool_out thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:45,704 | INFO     | [job] queue monitor thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:45,736 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 13:38:13] 2025-07-28 17:37:45,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140260720764736)>', '<ExcThread(monitor, started 140259807459072)>']
[2025-07-28 13:38:13] 2025-07-28 17:37:51,002 | INFO     | all workflow threads have been joined
[2025-07-28 13:38:13] 2025-07-28 17:37:51,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 13:38:13] 2025-07-28 17:37:51,003 | INFO     | traces error code: 0
[2025-07-28 13:38:13] 2025-07-28 17:37:51,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 13:38:13] 2025-07-28 17:38:12,948 | INFO     | PID=3239343 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 13:38:13] 2025-07-28 17:38:12,948 | INFO     | .. there are 11 such processes running
[2025-07-28 13:38:13] 2025-07-28 17:38:12,949 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 13:38:13] 2025-07-28 17:38:12,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 13:38:13] 2025-07-28 17:38:12,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 13:38:13] 2025-07-28 17:38:12,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 13:38:13] 2025-07-28 17:38:12,950 | INFO     | [monitor] control thread has ended
[2025-07-28 13:38:13] 2025-07-28 17:38:13,120 [wrapper] ==== pilot stdout END ====
[2025-07-28 13:38:13] 2025-07-28 17:38:13,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 13:38:13] 2025-07-28 17:38:13,127 [wrapper] pilotpid: 3239343
[2025-07-28 13:38:13] 2025-07-28 17:38:13,130 [wrapper] Pilot exit status: 0
[2025-07-28 13:38:13] 2025-07-28 17:38:13,140 [wrapper] pandaids: 6748782641
[2025-07-28 13:38:13] 2025-07-28 17:38:13,221 [wrapper] cleanup supervisor_pilot 3686541 3239344
[2025-07-28 13:38:13] 2025-07-28 17:38:13,226 [wrapper] Test setup, not cleaning
[2025-07-28 13:38:13] 2025-07-28 17:38:13,230 [wrapper] apfmon messages muted
[2025-07-28 13:38:13] 2025-07-28 17:38:13,233 [wrapper] ==== wrapper stdout END ====
[2025-07-28 13:38:13] 2025-07-28 17:38:13,237 [wrapper] ==== wrapper stderr END ====
[2025-07-28 13:38:13]  *** Error codes and diagnostics ***
[2025-07-28 13:38:13]     "exeErrorCode": 0,
[2025-07-28 13:38:13]     "exeErrorDiag": "",
[2025-07-28 13:38:13]     "pilotErrorCode": 0,
[2025-07-28 13:38:13]     "pilotErrorDiag": "",
[2025-07-28 13:38:13]  *** Listing of results directory ***
[2025-07-28 13:38:13] total 476240
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas    530466 Jul 28 11:02 pilot3.tar.gz
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas      5112 Jul 28 11:27 queuedata.json
[2025-07-28 13:38:13] -rwx------. 1 boincer umatlas     36292 Jul 28 11:28 runpilot2-wrapper.sh
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas       100 Jul 28 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 13:38:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 11:28 run_atlas
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas       105 Jul 28 11:28 job.xml
[2025-07-28 13:38:13] -rw-r--r--. 2 boincer umatlas 272419702 Jul 28 11:28 EVNT.45803661._000005.pool.root.1
[2025-07-28 13:38:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 11:28 start_atlas.sh
[2025-07-28 13:38:13] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 11:28 shared
[2025-07-28 13:38:13] -rw-r--r--. 2 boincer umatlas    542872 Jul 28 11:28 input.tar.gz
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas         0 Jul 28 11:28 boinc_lockfile
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas      2510 Jul 28 11:28 pandaJob.out
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas    977006 Jul 28 11:28 agis_schedconf.cvmfs.json
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas   1589827 Jul 28 11:28 agis_ddmendpoints.agis.ALL.json
[2025-07-28 13:38:13] drwx------. 4 boincer umatlas      4096 Jul 28 11:29 pilot3
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas 209139745 Jul 28 13:36 HITS.45803666._000123.pool.root.1
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas       530 Jul 28 13:36 boinc_task_state.xml
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas      6842 Jul 28 13:37 init_data.xml
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas      1037 Jul 28 13:37 memory_monitor_summary.json
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas    409345 Jul 28 13:37 log.45803666._000123.job.log.tgz.1
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas      7815 Jul 28 13:37 heartbeat.json
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas        95 Jul 28 13:38 pilot_heartbeat.json
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas       823 Jul 28 13:38 pilotlog.txt
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 13:38 boinc_mmap_file
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas        27 Jul 28 13:38 wrapper_checkpoint.txt
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas    711974 Jul 28 13:38 log.45803666._000123.job.log.1
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas       357 Jul 28 13:38 output.list
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas       620 Jul 28 13:38 runtime_log
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas   1136640 Jul 28 13:38 result.tar.gz
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas       655 Jul 28 13:38 Zz7LDm1we07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZfWLDmT8M60m.diag
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 13:38 runtime_log.err
[2025-07-28 13:38:13] -rw-r--r--. 1 boincer umatlas     21197 Jul 28 13:38 stderr.txt
[2025-07-28 13:38:13] HITS file was successfully produced:
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas 209139745 Jul 28 13:36 shared/HITS.pool.root.1
[2025-07-28 13:38:13]  *** Contents of shared directory: ***
[2025-07-28 13:38:13] total 471944
[2025-07-28 13:38:13] -rw-r--r--. 2 boincer umatlas 272419702 Jul 28 11:28 ATLAS.root_0
[2025-07-28 13:38:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 11:28 start_atlas.sh
[2025-07-28 13:38:13] -rw-r--r--. 2 boincer umatlas    542872 Jul 28 11:28 input.tar.gz
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas 209139745 Jul 28 13:36 HITS.pool.root.1
[2025-07-28 13:38:13] -rw-------. 1 boincer umatlas   1136640 Jul 28 13:38 result.tar.gz
13:38:15 (3234786): run_atlas exited; CPU time 55113.694167
13:38:15 (3234786): called boinc_finish(0)

</stderr_txt>
]]>

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