Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:09:16 (2504865): wrapper (7.7.26015): starting
11:09:16 (2504865): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 11:09:16] Arguments: --nthreads 8
[2025-07-28 11:09:16] Threads: 8
[2025-07-28 11:09:16] Checking for CVMFS
[2025-07-28 11:09:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 11:09:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 11:09:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 11:09:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 11:09:16] 2.12.6.0 1094862 19981 418672 148851 0 254 29216340 32935936 19521 16776704 1 122671028 99.588 130529145 20143 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 11:09:16] CVMFS is ok
[2025-07-28 11:09:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 11:09:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 11:09:16] Further information can be found at the LHC@home message board.
[2025-07-28 11:09:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 11:09:16] Checking for apptainer binary...
[2025-07-28 11:09:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 11:09:16] Running /usr/bin/apptainer --version
[2025-07-28 11:09:16] apptainer version 1.4.1-1.el9
[2025-07-28 11:09:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 11:09:17] lc-12-33.aglt2.org
[2025-07-28 11:09:17] apptainer works
[2025-07-28 11:09:17] Set ATHENA_PROC_NUMBER=8
[2025-07-28 11:09:17] Set ATHENA_CORE_NUMBER=8
[2025-07-28 11:09:17] Starting ATLAS job with PandaID=6748844051
[2025-07-28 11:09:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 13:13:37]  *** The last 200 lines of the pilot log: ***
[2025-07-28 13:13:37] 2025-07-28 17:13:15,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 13:13:37] 2025-07-28 17:13:15,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 13:13:37] 2025-07-28 17:13:15,991 | INFO     | fitting pss+swap vs Time
[2025-07-28 13:13:37] 2025-07-28 17:13:15,992 | INFO     | sum of square deviations: 563049559.68033
[2025-07-28 13:13:37] 2025-07-28 17:13:15,992 | INFO     | sum of deviations: 2183064600.5000057
[2025-07-28 13:13:37] 2025-07-28 17:13:15,993 | INFO     | mean x: 1753719086.581967
[2025-07-28 13:13:37] 2025-07-28 17:13:15,993 | INFO     | mean y: 2156964.5
[2025-07-28 13:13:37] 2025-07-28 17:13:15,993 | INFO     | -- intersect: -6797390235.771159
[2025-07-28 13:13:37] 2025-07-28 17:13:15,993 | INFO     | intersect: -6797390235.771159
[2025-07-28 13:13:37] 2025-07-28 17:13:15,993 | INFO     | chi2: 2.0401404082649206
[2025-07-28 13:13:37] 2025-07-28 17:13:15,994 | INFO     | sum of square deviations: 496623457.1452982
[2025-07-28 13:13:37] 2025-07-28 17:13:15,994 | INFO     | sum of deviations: 9086005998.34188
[2025-07-28 13:13:37] 2025-07-28 17:13:15,994 | INFO     | mean x: 1753718934.0854702
[2025-07-28 13:13:37] 2025-07-28 17:13:15,994 | INFO     | mean y: 2172328.965811966
[2025-07-28 13:13:37] 2025-07-28 17:13:15,995 | INFO     | -- intersect: -32083103799.75394
[2025-07-28 13:13:37] 2025-07-28 17:13:15,995 | INFO     | intersect: -32083103799.75394
[2025-07-28 13:13:37] 2025-07-28 17:13:15,995 | INFO     | chi2: 1.3891736310473557
[2025-07-28 13:13:37] 2025-07-28 17:13:15,995 | INFO     | current chi2=1.3891736310473557 (change=31.907939991796596 %)
[2025-07-28 13:13:37] 2025-07-28 17:13:15,995 | INFO     | sum of square deviations: 435639317.1071427
[2025-07-28 13:13:37] 2025-07-28 17:13:15,996 | INFO     | sum of deviations: 8933171539.107141
[2025-07-28 13:13:37] 2025-07-28 17:13:15,996 | INFO     | mean x: 1753718781.5892856
[2025-07-28 13:13:37] 2025-07-28 17:13:15,996 | INFO     | mean y: 2171962.589285714
[2025-07-28 13:13:37] 2025-07-28 17:13:15,996 | INFO     | -- intersect: -35959390945.28306
[2025-07-28 13:13:37] 2025-07-28 17:13:15,996 | INFO     | intersect: -35959390945.28306
[2025-07-28 13:13:37] 2025-07-28 17:13:15,997 | INFO     | chi2: 1.390383734298204
[2025-07-28 13:13:37] 2025-07-28 17:13:15,997 | INFO     | current chi2=1.390383734298204 (change=-0.08710957534774842 %)
[2025-07-28 13:13:37] 2025-07-28 17:13:15,997 | INFO     | right removable region: 111
[2025-07-28 13:13:37] 2025-07-28 17:13:15,997 | INFO     | sum of square deviations: 496617357.1452982
[2025-07-28 13:13:37] 2025-07-28 17:13:15,998 | INFO     | sum of deviations: -10967261814.290596
[2025-07-28 13:13:37] 2025-07-28 17:13:15,998 | INFO     | mean x: 1753719239.0854702
[2025-07-28 13:13:37] 2025-07-28 17:13:15,998 | INFO     | mean y: 2186427.829059829
[2025-07-28 13:13:37] 2025-07-28 17:13:15,998 | INFO     | -- intersect: 38731195325.88412
[2025-07-28 13:13:37] 2025-07-28 17:13:15,998 | INFO     | intersect: 38731195325.88412
[2025-07-28 13:13:37] 2025-07-28 17:13:15,998 | INFO     | chi2: 0.7760201829646199
[2025-07-28 13:13:37] 2025-07-28 17:13:15,998 | INFO     | current chi2=0.7760201829646199 (change=61.96241298780989 %)
[2025-07-28 13:13:37] 2025-07-28 17:13:15,998 | INFO     | sum of square deviations: 435627117.1071427
[2025-07-28 13:13:37] 2025-07-28 17:13:15,999 | INFO     | sum of deviations: -6906780001.089286
[2025-07-28 13:13:37] 2025-07-28 17:13:15,999 | INFO     | mean x: 1753719391.5892856
[2025-07-28 13:13:37] 2025-07-28 17:13:15,999 | INFO     | mean y: 2176435.2589285714
[2025-07-28 13:13:37] 2025-07-28 17:13:15,999 | INFO     | -- intersect: 27807043363.16475
[2025-07-28 13:13:37] 2025-07-28 17:13:15,999 | INFO     | intersect: 27807043363.16475
[2025-07-28 13:13:37] 2025-07-28 17:13:15,999 | INFO     | chi2: 0.7075454866700097
[2025-07-28 13:13:37] 2025-07-28 17:13:16,000 | INFO     | current chi2=0.7075454866700097 (change=8.823829302095884 %)
[2025-07-28 13:13:37] 2025-07-28 17:13:16,000 | INFO     | left removable region: 20
[2025-07-28 13:13:37] 2025-07-28 17:13:16,000 | INFO     | sum of square deviations: 233659288.90109888
[2025-07-28 13:13:37] 2025-07-28 17:13:16,000 | INFO     | sum of deviations: -433015733.5054945
[2025-07-28 13:13:37] 2025-07-28 17:13:16,000 | INFO     | mean x: 1753719361.1098902
[2025-07-28 13:13:37] 2025-07-28 17:13:16,000 | INFO     | mean y: 2195689.4505494507
[2025-07-28 13:13:37] 2025-07-28 17:13:16,000 | INFO     | -- intersect: 3252175945.2546015
[2025-07-28 13:13:37] 2025-07-28 17:13:16,001 | INFO     | intersect: 3252175945.2546015
[2025-07-28 13:13:37] 2025-07-28 17:13:16,001 | INFO     | chi2: 0.02372582249469099
[2025-07-28 13:13:37] 2025-07-28 17:13:16,001 | INFO     | -- intersect: 3252175945.2546015
[2025-07-28 13:13:37] 2025-07-28 17:13:16,001 | INFO     | current memory leak: -1.85 B/s (using 91 data points, chi2=0.02)
[2025-07-28 13:13:37] 2025-07-28 17:13:16,001 | INFO     | could have reported an average CPU frequency of 2580 MHz (8 samples)
[2025-07-28 13:13:37] 2025-07-28 17:13:16,002 | INFO     | ..............................
[2025-07-28 13:13:37] 2025-07-28 17:13:16,002 | INFO     | . Timing measurements:
[2025-07-28 13:13:37] 2025-07-28 17:13:16,002 | INFO     | . get job = 0 s
[2025-07-28 13:13:37] 2025-07-28 17:13:16,002 | INFO     | . initial setup = 2 s
[2025-07-28 13:13:37] 2025-07-28 17:13:16,002 | INFO     | . payload setup = 7 s
[2025-07-28 13:13:37] 2025-07-28 17:13:16,002 | INFO     | . stage-in = 0 s
[2025-07-28 13:13:37] 2025-07-28 17:13:16,002 | INFO     | . payload execution = 7392 s
[2025-07-28 13:13:37] 2025-07-28 17:13:16,002 | INFO     | . stage-out = 0 s
[2025-07-28 13:13:37] 2025-07-28 17:13:16,002 | INFO     | . log creation = 0 s
[2025-07-28 13:13:37] 2025-07-28 17:13:16,002 | INFO     | ..............................
[2025-07-28 13:13:37] 2025-07-28 17:13:16,100 | INFO     | 
[2025-07-28 13:13:37] 2025-07-28 17:13:16,101 | INFO     | job summary report
[2025-07-28 13:13:37] 2025-07-28 17:13:16,101 | INFO     | --------------------------------------------------
[2025-07-28 13:13:37] 2025-07-28 17:13:16,101 | INFO     | PanDA job id: 6748844051
[2025-07-28 13:13:37] 2025-07-28 17:13:16,101 | INFO     | task id: 45743349
[2025-07-28 13:13:37] 2025-07-28 17:13:16,101 | INFO     | errors: (none)
[2025-07-28 13:13:37] 2025-07-28 17:13:16,101 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 13:13:37] 2025-07-28 17:13:16,101 | INFO     | pilot state: finished 
[2025-07-28 13:13:37] 2025-07-28 17:13:16,101 | INFO     | transexitcode: 0
[2025-07-28 13:13:37] 2025-07-28 17:13:16,101 | INFO     | exeerrorcode: 0
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | exeerrordiag: 
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | exitcode: 0
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | exitmsg: OK
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | cpuconsumptiontime: 49381 s
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | nevents: 400
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | neventsw: 0
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | pid: 2522212
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | pgrp: 2522212
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | corecount: 8
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | event service: False
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | sizes: {0: 2391858, 4: 2392120, 11: 2392148, 7404: 2419505, 7405: 2428559, 7413: 2428697}
[2025-07-28 13:13:37] 2025-07-28 17:13:16,102 | INFO     | --------------------------------------------------
[2025-07-28 13:13:37] 2025-07-28 17:13:16,103 | INFO     | 
[2025-07-28 13:13:37] 2025-07-28 17:13:16,103 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 13:13:37] 2025-07-28 17:13:16,129 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,129 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,130 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,131 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 13:13:37] 2025-07-28 17:13:16,131 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,131 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 13:13:37] 2025-07-28 17:13:16,131 | INFO     | job 6748844051 has completed (purged errors)
[2025-07-28 13:13:37] 2025-07-28 17:13:16,131 | INFO     | overall cleanup function is called
[2025-07-28 13:13:37] 2025-07-28 17:13:17,140 | INFO     | --- collectZombieJob: --- 10, [2522212]
[2025-07-28 13:13:37] 2025-07-28 17:13:17,141 | INFO     | zombie collector waiting for pid 2522212
[2025-07-28 13:13:37] 2025-07-28 17:13:17,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 13:13:37] 2025-07-28 17:13:17,142 | INFO     | collected zombie processes
[2025-07-28 13:13:37] 2025-07-28 17:13:17,142 | INFO     | will attempt to kill all subprocesses of pid=2522212
[2025-07-28 13:13:37] 2025-07-28 17:13:17,948 | INFO     | PID=2509285 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 13:13:37] 2025-07-28 17:13:17,948 | INFO     | .. there are 48 such processes running
[2025-07-28 13:13:37] 2025-07-28 17:13:18,112 | INFO     | process IDs to be killed: [2522212] (in reverse order)
[2025-07-28 13:13:37] 2025-07-28 17:13:18,266 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 13:13:37] 2025-07-28 17:13:18,267 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 13:13:37] 2025-07-28 17:13:18,291 | INFO     | did not find any defunct processes belonging to 2522212
[2025-07-28 13:13:37] 2025-07-28 17:13:18,315 | INFO     | did not find any defunct processes belonging to 2522212
[2025-07-28 13:13:37] 2025-07-28 17:13:18,315 | INFO     | ready for new job
[2025-07-28 13:13:37] 2025-07-28 17:13:18,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 13:13:37] 2025-07-28 17:13:18,317 | INFO     | ***************************************
[2025-07-28 13:13:37] 2025-07-28 17:13:18,318 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 13:13:37] 2025-07-28 17:13:18,318 | INFO     | ***************************************
[2025-07-28 13:13:37] 2025-07-28 17:13:18,318 | INFO     | 
[2025-07-28 13:13:37] 2025-07-28 17:13:18,336 | INFO     | architecture information:
[2025-07-28 13:13:37] 2025-07-28 17:13:18,336 | INFO     | executing command: cat /etc/os-release
[2025-07-28 13:13:37] 2025-07-28 17:13:18,354 | INFO     | cat /etc/os-release:
[2025-07-28 13:13:37] NAME="CentOS Linux"
[2025-07-28 13:13:37] VERSION="7 (Core)"
[2025-07-28 13:13:37] ID="centos"
[2025-07-28 13:13:37] ID_LIKE="rhel fedora"
[2025-07-28 13:13:37] VERSION_ID="7"
[2025-07-28 13:13:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 13:13:37] ANSI_COLOR="0;31"
[2025-07-28 13:13:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 13:13:37] HOME_URL="https://www.centos.org/"
[2025-07-28 13:13:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 13:13:37] 
[2025-07-28 13:13:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 13:13:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 13:13:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 13:13:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 13:13:37] 
[2025-07-28 13:13:37] 2025-07-28 17:13:18,354 | INFO     | ***************************************
[2025-07-28 13:13:37] 2025-07-28 17:13:18,857 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 13:13:37] 2025-07-28 17:13:18,877 | INFO     | sufficient remaining disk space (76690751488 B)
[2025-07-28 13:13:37] 2025-07-28 17:13:18,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 13:13:37] 2025-07-28 17:13:18,879 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 13:13:37] 2025-07-28 17:13:18,880 | INFO     | update_server=False
[2025-07-28 13:13:37] 2025-07-28 17:13:18,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 13:13:37] 2025-07-28 17:13:18,880 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 13:13:37] 2025-07-28 17:13:18,880 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 13:13:37] 2025-07-28 17:13:18,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 13:13:37] 2025-07-28 17:13:18,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 13:13:37] 2025-07-28 17:13:18,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 13:13:37] 2025-07-28 17:13:18,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 13:13:37] 2025-07-28 17:13:18,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:13:37] 2025-07-28 17:13:18,882 | INFO     | aborting loop
[2025-07-28 13:13:37] 2025-07-28 17:13:19,293 | INFO     | all data control threads have been joined
[2025-07-28 13:13:37] 2025-07-28 17:13:19,652 | INFO     | all job control threads have been joined
[2025-07-28 13:13:37] 2025-07-28 17:13:19,655 | INFO     | all payload control threads have been joined
[2025-07-28 13:13:37] 2025-07-28 17:13:19,885 | INFO     | [job] retrieve thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:19,888 | INFO     | [job] job monitor thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:20,059 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:20,077 | INFO     | [data] copytool_in thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:20,124 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:20,300 | INFO     | [data] control thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:20,440 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:20,658 | INFO     | [job] control thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:20,660 | INFO     | [payload] control thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:20,887 | INFO     | [data] copytool_out thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:20,893 | INFO     | [job] validate thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:20,940 | INFO     | [payload] validate_post thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:21,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:13:37] 2025-07-28 17:13:21,185 | INFO     | [payload] failed_post thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:22,120 | INFO     | [job] queue monitor thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:22,888 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:29,724 | INFO     | job.realtimelogging is not enabled
[2025-07-28 13:13:37] 2025-07-28 17:13:30,730 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 13:13:37] 2025-07-28 17:13:32,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395986503488)>', '<ExcThread(monitor, started 140395224753920)>']
[2025-07-28 13:13:37] 2025-07-28 17:13:32,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 13:13:37] 2025-07-28 17:13:32,960 | INFO     | [monitor] control thread has ended
[2025-07-28 13:13:37] 2025-07-28 17:13:37,344 | INFO     | all workflow threads have been joined
[2025-07-28 13:13:37] 2025-07-28 17:13:37,345 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 13:13:37] 2025-07-28 17:13:37,345 | INFO     | traces error code: 0
[2025-07-28 13:13:37] 2025-07-28 17:13:37,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 13:13:37] 2025-07-28 17:13:37,556 [wrapper] ==== pilot stdout END ====
[2025-07-28 13:13:37] 2025-07-28 17:13:37,559 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 13:13:37] 2025-07-28 17:13:37,563 [wrapper] pilotpid: 2509285
[2025-07-28 13:13:37] 2025-07-28 17:13:37,569 [wrapper] Pilot exit status: 0
[2025-07-28 13:13:37] 2025-07-28 17:13:37,594 [wrapper] pandaids: 6748844051
[2025-07-28 13:13:37] 2025-07-28 17:13:37,706 [wrapper] cleanup supervisor_pilot   68793 2509286
[2025-07-28 13:13:37] 2025-07-28 17:13:37,710 [wrapper] Test setup, not cleaning
[2025-07-28 13:13:37] 2025-07-28 17:13:37,713 [wrapper] apfmon messages muted
[2025-07-28 13:13:37] 2025-07-28 17:13:37,717 [wrapper] ==== wrapper stdout END ====
[2025-07-28 13:13:37] 2025-07-28 17:13:37,721 [wrapper] ==== wrapper stderr END ====
[2025-07-28 13:13:37]  *** Error codes and diagnostics ***
[2025-07-28 13:13:37]     "exeErrorCode": 0,
[2025-07-28 13:13:37]     "exeErrorDiag": "",
[2025-07-28 13:13:37]     "pilotErrorCode": 0,
[2025-07-28 13:13:37]     "pilotErrorDiag": "",
[2025-07-28 13:13:37]  *** Listing of results directory ***
[2025-07-28 13:13:37] total 351944
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas    530466 Jul 28 11:02 pilot3.tar.gz
[2025-07-28 13:13:37] -rwx------. 1 boincer umatlas     36292 Jul 28 11:08 runpilot2-wrapper.sh
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas      5112 Jul 28 11:08 queuedata.json
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas       100 Jul 28 11:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 13:13:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 11:09 run_atlas
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas       105 Jul 28 11:09 job.xml
[2025-07-28 13:13:37] -rw-r--r--. 2 boincer umatlas 144634302 Jul 28 11:09 EVNT.45743347._001644.pool.root.1
[2025-07-28 13:13:37] -rw-r--r--. 2 boincer umatlas    542907 Jul 28 11:09 input.tar.gz
[2025-07-28 13:13:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 11:09 start_atlas.sh
[2025-07-28 13:13:37] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 11:09 shared
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas         0 Jul 28 11:09 boinc_lockfile
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas      2562 Jul 28 11:09 pandaJob.out
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas    977006 Jul 28 11:09 agis_schedconf.cvmfs.json
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas   1589827 Jul 28 11:09 agis_ddmendpoints.agis.ALL.json
[2025-07-28 13:13:37] drwx------. 4 boincer umatlas      4096 Jul 28 11:09 pilot3
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas 209880400 Jul 28 13:12 HITS.45743349._056462.pool.root.1
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas       529 Jul 28 13:12 boinc_task_state.xml
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas        95 Jul 28 13:12 pilot_heartbeat.json
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas      1043 Jul 28 13:13 memory_monitor_summary.json
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas      6878 Jul 28 13:13 init_data.xml
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas    332995 Jul 28 13:13 log.45743349._056462.job.log.tgz.1
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas      7824 Jul 28 13:13 heartbeat.json
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 13:13 boinc_mmap_file
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas        27 Jul 28 13:13 wrapper_checkpoint.txt
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas      4552 Jul 28 13:13 pilotlog.txt
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas    664360 Jul 28 13:13 log.45743349._056462.job.log.1
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas       357 Jul 28 13:13 output.list
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas       620 Jul 28 13:13 runtime_log
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas   1013760 Jul 28 13:13 result.tar.gz
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas      8660 Jul 28 13:13 runtime_log.err
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas       654 Jul 28 13:13 k4yKDm6de07n9Rq4apOajLDm4fhM0noT9bVof3QYDmaE3KDmzvSqim.diag
[2025-07-28 13:13:37] -rw-r--r--. 1 boincer umatlas     20986 Jul 28 13:13 stderr.txt
[2025-07-28 13:13:37] HITS file was successfully produced:
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas 209880400 Jul 28 13:12 shared/HITS.pool.root.1
[2025-07-28 13:13:37]  *** Contents of shared directory: ***
[2025-07-28 13:13:37] total 347760
[2025-07-28 13:13:37] -rw-r--r--. 2 boincer umatlas 144634302 Jul 28 11:09 ATLAS.root_0
[2025-07-28 13:13:37] -rw-r--r--. 2 boincer umatlas    542907 Jul 28 11:09 input.tar.gz
[2025-07-28 13:13:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 11:09 start_atlas.sh
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas 209880400 Jul 28 13:12 HITS.pool.root.1
[2025-07-28 13:13:37] -rw-------. 1 boincer umatlas   1013760 Jul 28 13:13 result.tar.gz
13:13:39 (2504865): run_atlas exited; CPU time 49806.944369
13:13:39 (2504865): called boinc_finish(0)

</stderr_txt>
]]>

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