Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:11:21 (342546): wrapper (7.7.26015): starting
20:11:21 (342546): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 20:11:21] Arguments: --nthreads 3
[2025-07-28 20:11:21] Threads: 3
[2025-07-28 20:11:21] Checking for CVMFS
[2025-07-28 20:11:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 20:11:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 20:11:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 20:11:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 20:11:22] 2.9.2.0 2884365 5861 84432 148858 3 56 18881286 36864000 0 130560 0 4377934 99.990 210852 2069 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 20:11:22] CVMFS is ok
[2025-07-28 20:11:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 20:11:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 20:11:22] Further information can be found at the LHC@home message board.
[2025-07-28 20:11:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 20:11:22] Checking for apptainer binary...
[2025-07-28 20:11:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 20:11:22] Running /usr/bin/apptainer --version
[2025-07-28 20:11:22] apptainer version 1.4.1-1.1
[2025-07-28 20:11:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 20:11:22] magicA246
[2025-07-28 20:11:22] apptainer works
[2025-07-28 20:11:22] Set ATHENA_PROC_NUMBER=3
[2025-07-28 20:11:22] Set ATHENA_CORE_NUMBER=3
[2025-07-28 20:11:22] Starting ATLAS job with PandaID=6747577555
[2025-07-28 20:11:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 21:47:59]  *** The last 200 lines of the pilot log: ***
[2025-07-28 21:47:59]  storage_token=
[2025-07-28 21:47:59]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747577555/log.45743349._053070.job.log.tgz.1
[2025-07-28 21:47:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/e8/log.45743349._053070.job.log.tgz.1
[2025-07-28 21:47:59]  workdir=None
[2025-07-28 21:47:59] ]
[2025-07-28 21:47:59] 2025-07-28 19:47:25,404 | INFO     | transferring file log.45743349._053070.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747577555/log.45743349._053070.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 21:47:59] 2025-07-28 19:47:25,404 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747577555/log.45743349._053070.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0530
[2025-07-28 21:47:59] 2025-07-28 19:47:25,419 | INFO     | adding to output.list: log.45743349._053070.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/e8/log.45743349._053070.job.log.tg
[2025-07-28 21:47:59] 2025-07-28 19:47:25,419 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 21:47:59] 2025-07-28 19:47:25,419 | INFO     | summary of transferred files:
[2025-07-28 21:47:59] 2025-07-28 19:47:25,419 | INFO     |  -- lfn=log.45743349._053070.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 21:47:59] 2025-07-28 19:47:25,419 | INFO     | stage-out finished correctly
[2025-07-28 21:47:59] 2025-07-28 19:47:25,449 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 21:47:59] 2025-07-28 19:47:25,562 | INFO     | job 6747577555 has state=finished
[2025-07-28 21:47:59] 2025-07-28 19:47:25,562 | INFO     | preparing for final server update for job 6747577555 in state='finished'
[2025-07-28 21:47:59] 2025-07-28 19:47:25,563 | INFO     | this job has now completed (state=finished)
[2025-07-28 21:47:59] 2025-07-28 19:47:25,563 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 21:47:59] 2025-07-28 19:47:25,563 | INFO     | log transfer has been attempted: DONE
[2025-07-28 21:47:59] 2025-07-28 19:47:25,563 | INFO     | job 6747577555 has finished - writing final server update
[2025-07-28 21:47:59] 2025-07-28 19:47:25,563 | INFO     | total number of processed events: 400 (read)
[2025-07-28 21:47:59] 2025-07-28 19:47:25,564 | INFO     | executing command: lscpu
[2025-07-28 21:47:59] 2025-07-28 19:47:25,580 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 21:47:59] 2025-07-28 19:47:25,880 | WARNING  | process 352672 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 21:47:59] 2025-07-28 19:47:25,880 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747577555/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 21:47:59] 2025-07-28 19:47:25,880 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747577555/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 21:47:59] 2025-07-28 19:47:25,881 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1735197 B
[2025-07-28 21:47:59] 2025-07-28 19:47:25,881 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16022 B
[2025-07-28 21:47:59] 2025-07-28 19:47:25,881 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 21:47:59] 2025-07-28 19:47:28,028 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 21:47:59] 2025-07-28 19:47:28,031 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3921.562416666667
[2025-07-28 21:47:59] 2025-07-28 19:47:28,033 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747577555/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,034 | INFO     | extracted standard info from prmon json
[2025-07-28 21:47:59] 2025-07-28 19:47:28,034 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 21:47:59] 2025-07-28 19:47:28,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 21:47:59] 2025-07-28 19:47:28,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 21:47:59] 2025-07-28 19:47:28,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | fitting pss+swap vs Time
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | sum of square deviations: 204163828.0
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | sum of deviations: -1647468846.0
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | mean x: 1753729236.0
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | mean y: 2442281.620689655
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | -- intersect: 14153892658.175058
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | intersect: 14153892658.175058
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | chi2: 0.024271218149333352
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | -- intersect: 14153892658.175058
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | current memory leak: -8.07 B/s (using 87 data points, chi2=0.02)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,035 | INFO     | could have reported an average CPU frequency of 3975 MHz (7 samples)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,036 | INFO     | ..............................
[2025-07-28 21:47:59] 2025-07-28 19:47:28,036 | INFO     | . Timing measurements:
[2025-07-28 21:47:59] 2025-07-28 19:47:28,036 | INFO     | . get job = 0 s
[2025-07-28 21:47:59] 2025-07-28 19:47:28,036 | INFO     | . initial setup = 1 s
[2025-07-28 21:47:59] 2025-07-28 19:47:28,036 | INFO     | . payload setup = 3 s
[2025-07-28 21:47:59] 2025-07-28 19:47:28,036 | INFO     | . stage-in = 0 s
[2025-07-28 21:47:59] 2025-07-28 19:47:28,036 | INFO     | . payload execution = 5736 s
[2025-07-28 21:47:59] 2025-07-28 19:47:28,036 | INFO     | . stage-out = 0 s
[2025-07-28 21:47:59] 2025-07-28 19:47:28,037 | INFO     | . log creation = 0 s
[2025-07-28 21:47:59] 2025-07-28 19:47:28,037 | INFO     | ..............................
[2025-07-28 21:47:59] 2025-07-28 19:47:28,048 | INFO     | sufficient remaining disk space (383556517888 B)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,053 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | 
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | job summary report
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | --------------------------------------------------
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | PanDA job id: 6747577555
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | task id: 45743349
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | errors: (none)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | pilot state: finished 
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | transexitcode: 0
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | exeerrorcode: 0
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | exeerrordiag: 
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | exitcode: 0
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | exitmsg: OK
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | cpuconsumptiontime: 16473 s
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | nevents: 400
[2025-07-28 21:47:59] 2025-07-28 19:47:28,069 | INFO     | neventsw: 0
[2025-07-28 21:47:59] 2025-07-28 19:47:28,070 | INFO     | pid: 352672
[2025-07-28 21:47:59] 2025-07-28 19:47:28,070 | INFO     | pgrp: 352672
[2025-07-28 21:47:59] 2025-07-28 19:47:28,070 | INFO     | corecount: 3
[2025-07-28 21:47:59] 2025-07-28 19:47:28,070 | INFO     | event service: False
[2025-07-28 21:47:59] 2025-07-28 19:47:28,070 | INFO     | sizes: {0: 2391909, 2: 2392171, 11: 2392199, 5743: 2419006, 5744: 2428065, 5747: 2428203}
[2025-07-28 21:47:59] 2025-07-28 19:47:28,070 | INFO     | --------------------------------------------------
[2025-07-28 21:47:59] 2025-07-28 19:47:28,070 | INFO     | 
[2025-07-28 21:47:59] 2025-07-28 19:47:28,070 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 21:47:59] 2025-07-28 19:47:28,072 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6747577555: 2038482 B (within 2537553920 B limit)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,073 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6747577555/HITS.45743349._053070.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,073 | INFO     | total size of present files: 0 B (workdir size: 2038482 B)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,073 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6747577555/HITS.45743349._053070.pool.root.1 since it does not exist
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 21:47:59] 2025-07-28 19:47:28,083 | INFO     | job 6747577555 has completed (purged errors)
[2025-07-28 21:47:59] 2025-07-28 19:47:28,083 | INFO     | overall cleanup function is called
[2025-07-28 21:47:59] 2025-07-28 19:47:28,114 | INFO     | number of running child processes to parent process 352672: 1
[2025-07-28 21:47:59] 2025-07-28 19:47:28,114 | INFO     | maximum number of monitored processes: 6
[2025-07-28 21:47:59] 2025-07-28 19:47:28,114 | INFO     | aborting job monitoring since job object (job id=6747577555) has expired
[2025-07-28 21:47:59] 2025-07-28 19:47:29,087 | INFO     | --- collectZombieJob: --- 10, [352672]
[2025-07-28 21:47:59] 2025-07-28 19:47:29,087 | INFO     | zombie collector waiting for pid 352672
[2025-07-28 21:47:59] 2025-07-28 19:47:29,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 21:47:59] 2025-07-28 19:47:29,087 | INFO     | collected zombie processes
[2025-07-28 21:47:59] 2025-07-28 19:47:29,088 | INFO     | will attempt to kill all subprocesses of pid=352672
[2025-07-28 21:47:59] 2025-07-28 19:47:29,127 | INFO     | process IDs to be killed: [352672] (in reverse order)
[2025-07-28 21:47:59] 2025-07-28 19:47:29,151 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 21:47:59] 2025-07-28 19:47:29,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 21:47:59] 2025-07-28 19:47:29,152 | INFO     | did not find any defunct processes belonging to 352672
[2025-07-28 21:47:59] 2025-07-28 19:47:29,153 | INFO     | did not find any defunct processes belonging to 352672
[2025-07-28 21:47:59] 2025-07-28 19:47:29,153 | INFO     | ready for new job
[2025-07-28 21:47:59] 2025-07-28 19:47:29,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 21:47:59] 2025-07-28 19:47:29,154 | INFO     | ***************************************
[2025-07-28 21:47:59] 2025-07-28 19:47:29,154 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 21:47:59] 2025-07-28 19:47:29,154 | INFO     | ***************************************
[2025-07-28 21:47:59] 2025-07-28 19:47:29,154 | INFO     | 
[2025-07-28 21:47:59] 2025-07-28 19:47:29,154 | INFO     | architecture information:
[2025-07-28 21:47:59] 2025-07-28 19:47:29,155 | INFO     | executing command: cat /etc/os-release
[2025-07-28 21:47:59] 2025-07-28 19:47:29,164 | INFO     | cat /etc/os-release:
[2025-07-28 21:47:59] NAME="CentOS Linux"
[2025-07-28 21:47:59] VERSION="7 (Core)"
[2025-07-28 21:47:59] ID="centos"
[2025-07-28 21:47:59] ID_LIKE="rhel fedora"
[2025-07-28 21:47:59] VERSION_ID="7"
[2025-07-28 21:47:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 21:47:59] ANSI_COLOR="0;31"
[2025-07-28 21:47:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 21:47:59] HOME_URL="https://www.centos.org/"
[2025-07-28 21:47:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 21:47:59] 
[2025-07-28 21:47:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 21:47:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 21:47:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 21:47:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 21:47:59] 
[2025-07-28 21:47:59] 2025-07-28 19:47:29,164 | INFO     | ***************************************
[2025-07-28 21:47:59] 2025-07-28 19:47:29,667 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 21:47:59] 2025-07-28 19:47:29,681 | INFO     | sufficient remaining disk space (383559663616 B)
[2025-07-28 21:47:59] 2025-07-28 19:47:29,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 21:47:59] 2025-07-28 19:47:29,681 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 21:47:59] 2025-07-28 19:47:29,681 | INFO     | update_server=False
[2025-07-28 21:47:59] 2025-07-28 19:47:29,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 21:47:59] 2025-07-28 19:47:29,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 21:47:59] 2025-07-28 19:47:29,681 | INFO     | aborting loop
[2025-07-28 21:47:59] 2025-07-28 19:47:29,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 21:47:59] 2025-07-28 19:47:30,030 | INFO     | all job control threads have been joined
[2025-07-28 21:47:59] 2025-07-28 19:47:30,195 | INFO     | all payload control threads have been joined
[2025-07-28 21:47:59] 2025-07-28 19:47:30,512 | INFO     | all data control threads have been joined
[2025-07-28 21:47:59] 2025-07-28 19:47:30,687 | INFO     | [job] retrieve thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:30,687 | INFO     | [job] job monitor thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:30,687 | INFO     | [job] queue monitor thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:30,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 21:47:59] 2025-07-28 19:47:31,036 | INFO     | [job] control thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:31,098 | INFO     | [data] copytool_in thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:31,201 | INFO     | [payload] control thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:31,447 | INFO     | [job] validate thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:31,461 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:31,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 21:47:59] 2025-07-28 19:47:31,507 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:31,518 | INFO     | [data] control thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:31,540 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:31,637 | INFO     | [payload] failed_post thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:32,164 | INFO     | [payload] validate_post thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:32,965 | INFO     | [data] copytool_out thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:35,490 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:39,981 | INFO     | job.realtimelogging is not enabled
[2025-07-28 21:47:59] 2025-07-28 19:47:40,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 21:47:59] 2025-07-28 19:47:42,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098024580928)>', '<ExcThread(monitor, started 140097378830080)>']
[2025-07-28 21:47:59] 2025-07-28 19:47:47,323 | INFO     | all workflow threads have been joined
[2025-07-28 21:47:59] 2025-07-28 19:47:47,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 21:47:59] 2025-07-28 19:47:47,323 | INFO     | traces error code: 0
[2025-07-28 21:47:59] 2025-07-28 19:47:47,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 21:47:59] 2025-07-28 19:47:59,276 | INFO     | PID=346184 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 21:47:59] 2025-07-28 19:47:59,276 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 21:47:59] 2025-07-28 19:47:59,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 21:47:59] 2025-07-28 19:47:59,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 21:47:59] 2025-07-28 19:47:59,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 21:47:59] 2025-07-28 19:47:59,277 | INFO     | [monitor] control thread has ended
[2025-07-28 21:47:59] 2025-07-28 19:47:59,326 [wrapper] ==== pilot stdout END ====
[2025-07-28 21:47:59] 2025-07-28 19:47:59,329 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 21:47:59] 2025-07-28 19:47:59,331 [wrapper] pilotpid: 346184
[2025-07-28 21:47:59] 2025-07-28 19:47:59,334 [wrapper] Pilot exit status: 0
[2025-07-28 21:47:59] 2025-07-28 19:47:59,342 [wrapper] pandaids: 6747577555
[2025-07-28 21:47:59] 2025-07-28 19:47:59,358 [wrapper] cleanup supervisor_pilot  364804 346185
[2025-07-28 21:47:59] 2025-07-28 19:47:59,361 [wrapper] Test setup, not cleaning
[2025-07-28 21:47:59] 2025-07-28 19:47:59,363 [wrapper] apfmon messages muted
[2025-07-28 21:47:59] 2025-07-28 19:47:59,366 [wrapper] ==== wrapper stdout END ====
[2025-07-28 21:47:59] 2025-07-28 19:47:59,368 [wrapper] ==== wrapper stderr END ====
[2025-07-28 21:47:59]  *** Error codes and diagnostics ***
[2025-07-28 21:47:59]     "exeErrorCode": 0,
[2025-07-28 21:47:59]     "exeErrorDiag": "",
[2025-07-28 21:47:59]     "pilotErrorCode": 0,
[2025-07-28 21:47:59]     "pilotErrorDiag": "",
[2025-07-28 21:47:59]  *** Listing of results directory ***
[2025-07-28 21:47:59] total 352276
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc    530466 Jul 27 19:39 pilot3.tar.gz
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc      5112 Jul 27 19:39 queuedata.json
[2025-07-28 21:47:59] -rwx------ 1 boinc boinc     36292 Jul 27 19:40 runpilot2-wrapper.sh
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc       100 Jul 28 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 21:47:59] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 20:11 run_atlas
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc       105 Jul 28 20:11 job.xml
[2025-07-28 21:47:59] -rw-r--r-- 2 boinc boinc 146354329 Jul 28 20:11 EVNT.45743347._002896.pool.root.1
[2025-07-28 21:47:59] -rw-r--r-- 2 boinc boinc    542891 Jul 28 20:11 input.tar.gz
[2025-07-28 21:47:59] -rw-r--r-- 2 boinc boinc     15095 Jul 28 20:11 start_atlas.sh
[2025-07-28 21:47:59] drwxrwx--x 2 boinc boinc      4096 Jul 28 20:11 shared
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc         0 Jul 28 20:11 boinc_setup_complete
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc      6526 Jul 28 20:11 init_data.xml
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc         0 Jul 28 20:11 boinc_lockfile
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc      2561 Jul 28 20:11 pandaJob.out
[2025-07-28 21:47:59] -rw------- 1 boinc boinc    977348 Jul 28 20:11 agis_schedconf.cvmfs.json
[2025-07-28 21:47:59] -rw------- 1 boinc boinc   1589827 Jul 28 20:11 agis_ddmendpoints.agis.ALL.json
[2025-07-28 21:47:59] drwx------ 4 boinc boinc      4096 Jul 28 20:11 pilot3
[2025-07-28 21:47:59] -rw------- 1 boinc boinc 208937873 Jul 28 21:47 HITS.45743349._053070.pool.root.1
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc       529 Jul 28 21:47 boinc_task_state.xml
[2025-07-28 21:47:59] -rw------- 1 boinc boinc      1016 Jul 28 21:47 memory_monitor_summary.json
[2025-07-28 21:47:59] -rw------- 1 boinc boinc    226000 Jul 28 21:47 log.45743349._053070.job.log.tgz.1
[2025-07-28 21:47:59] -rw------- 1 boinc boinc      7746 Jul 28 21:47 heartbeat.json
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc      8192 Jul 28 21:47 boinc_mmap_file
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc        27 Jul 28 21:47 wrapper_checkpoint.txt
[2025-07-28 21:47:59] -rw------- 1 boinc boinc       746 Jul 28 21:47 pilotlog.txt
[2025-07-28 21:47:59] -rw------- 1 boinc boinc        95 Jul 28 21:47 pilot_heartbeat.json
[2025-07-28 21:47:59] -rw------- 1 boinc boinc    553822 Jul 28 21:47 log.45743349._053070.job.log.1
[2025-07-28 21:47:59] -rw------- 1 boinc boinc       357 Jul 28 21:47 output.list
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc       620 Jul 28 21:47 runtime_log
[2025-07-28 21:47:59] -rw------- 1 boinc boinc    798720 Jul 28 21:47 result.tar.gz
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc      8749 Jul 28 21:47 runtime_log.err
[2025-07-28 21:47:59] -rw------- 1 boinc boinc       661 Jul 28 21:47 McSLDmYXK07n9Rq4apOajLDm4fhM0noT9bVof3QYDm4q2KDmX2fjpn.diag
[2025-07-28 21:47:59] -rw-r--r-- 1 boinc boinc     22468 Jul 28 21:47 stderr.txt
[2025-07-28 21:47:59] HITS file was successfully produced:
[2025-07-28 21:47:59] -rw------- 1 boinc boinc 208937873 Jul 28 21:47 shared/HITS.pool.root.1
[2025-07-28 21:47:59]  *** Contents of shared directory: ***
[2025-07-28 21:47:59] total 348308
[2025-07-28 21:47:59] -rw-r--r-- 2 boinc boinc 146354329 Jul 28 20:11 ATLAS.root_0
[2025-07-28 21:47:59] -rw-r--r-- 2 boinc boinc    542891 Jul 28 20:11 input.tar.gz
[2025-07-28 21:47:59] -rw-r--r-- 2 boinc boinc     15095 Jul 28 20:11 start_atlas.sh
[2025-07-28 21:47:59] -rw------- 1 boinc boinc 208937873 Jul 28 21:47 HITS.pool.root.1
[2025-07-28 21:47:59] -rw------- 1 boinc boinc    798720 Jul 28 21:47 result.tar.gz
21:48:00 (342546): run_atlas exited; CPU time 16488.768024
21:48:00 (342546): called boinc_finish(0)

</stderr_txt>
]]>

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