Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:28:42 (3189174): wrapper (7.7.26015): starting
07:28:42 (3189174): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 07:28:42] Arguments: --nthreads 8
[2025-07-28 07:28:42] Threads: 8
[2025-07-28 07:28:42] Checking for CVMFS
[2025-07-28 07:28:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 07:28:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 07:28:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 07:28:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 07:28:42] 2.13.1.0 5097 15358 220100 148845 3 16 24606499 40960001 206 16776704 0 48310186 99.936 17691134 43570 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 07:28:42] CVMFS is ok
[2025-07-28 07:28:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 07:28:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 07:28:42] Further information can be found at the LHC@home message board.
[2025-07-28 07:28:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 07:28:42] Checking for apptainer binary...
[2025-07-28 07:28:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 07:28:42] Running /usr/bin/apptainer --version
[2025-07-28 07:28:42] apptainer version 1.4.1-1.el9
[2025-07-28 07:28:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 07:28:42] c-212-6.aglt2.org
[2025-07-28 07:28:42] apptainer works
[2025-07-28 07:28:42] Set ATHENA_PROC_NUMBER=8
[2025-07-28 07:28:42] Set ATHENA_CORE_NUMBER=8
[2025-07-28 07:28:42] Starting ATLAS job with PandaID=6748615111
[2025-07-28 07:28:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 08:17:06]  *** The last 200 lines of the pilot log: ***
[2025-07-28 08:17:06]  is_altstaged=None
[2025-07-28 08:17:06]  is_tar=False
[2025-07-28 08:17:06]  lfn=log.45758813._000129.job.log.tgz.1
[2025-07-28 08:17:06]  mtime=0
[2025-07-28 08:17:06]  protocol_id=None
[2025-07-28 08:17:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 08:17:06]  replicas=None
[2025-07-28 08:17:06]  scope=mc23_13p6TeV
[2025-07-28 08:17:06]  status=None
[2025-07-28 08:17:06]  status_code=0
[2025-07-28 08:17:06]  storage_token=
[2025-07-28 08:17:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748615111/log.45758813._000129.job.log.tgz.1
[2025-07-28 08:17:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/3e/log.45758813._000129.job.log.tgz.1
[2025-07-28 08:17:06]  workdir=None
[2025-07-28 08:17:06] ]
[2025-07-28 08:17:06] 2025-07-28 12:16:29,178 | INFO     | transferring file log.45758813._000129.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748615111/log.45758813._000129.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 08:17:06] 2025-07-28 12:16:29,178 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748615111/log.45758813._000129.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758813._000129.job
[2025-07-28 08:17:06] 2025-07-28 12:16:29,193 | INFO     | adding to output.list: log.45758813._000129.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/3e/log.45758813._000129.job.log.tg
[2025-07-28 08:17:06] 2025-07-28 12:16:29,193 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 08:17:06] 2025-07-28 12:16:29,193 | INFO     | summary of transferred files:
[2025-07-28 08:17:06] 2025-07-28 12:16:29,193 | INFO     |  -- lfn=log.45758813._000129.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 08:17:06] 2025-07-28 12:16:29,193 | INFO     | stage-out finished correctly
[2025-07-28 08:17:06] 2025-07-28 12:16:30,463 | INFO     | monitor loop #219: job 0:6748615111 is in state 'finished'
[2025-07-28 08:17:06] 2025-07-28 12:16:30,463 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 08:17:06] 2025-07-28 12:16:31,058 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 08:17:06] 2025-07-28 12:16:31,781 | INFO     | job 6748615111 has state=finished
[2025-07-28 08:17:06] 2025-07-28 12:16:31,781 | INFO     | preparing for final server update for job 6748615111 in state='finished'
[2025-07-28 08:17:06] 2025-07-28 12:16:31,782 | INFO     | this job has now completed (state=finished)
[2025-07-28 08:17:06] 2025-07-28 12:16:31,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 08:17:06] 2025-07-28 12:16:31,782 | INFO     | log transfer has been attempted: DONE
[2025-07-28 08:17:06] 2025-07-28 12:16:31,782 | INFO     | job 6748615111 has finished - writing final server update
[2025-07-28 08:17:06] 2025-07-28 12:16:31,782 | INFO     | total number of processed events: 400 (read)
[2025-07-28 08:17:06] 2025-07-28 12:16:31,783 | INFO     | executing command: lscpu
[2025-07-28 08:17:06] 2025-07-28 12:16:31,822 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 08:17:06] 2025-07-28 12:16:32,967 | INFO     | monitor loop #220: job 0:6748615111 is in state 'finished'
[2025-07-28 08:17:06] 2025-07-28 12:16:32,967 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 08:17:06] 2025-07-28 12:16:34,577 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 08:17:06] 2025-07-28 12:16:34,580 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2749.513906249997
[2025-07-28 08:17:06] 2025-07-28 12:16:34,588 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748615111/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 08:17:06] 2025-07-28 12:16:34,589 | INFO     | extracted standard info from prmon json
[2025-07-28 08:17:06] 2025-07-28 12:16:34,589 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 08:17:06] 2025-07-28 12:16:34,589 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 08:17:06] 2025-07-28 12:16:34,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 08:17:06] 2025-07-28 12:16:34,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | fitting pss+swap vs Time
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | sum of square deviations: 19832930.0
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | sum of deviations: -197175942.50000003
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | mean x: 1753703645.5
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | mean y: 2620046.325
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | -- intersect: 17437672212.95638
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | intersect: 17437672212.95638
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | chi2: 0.04106146417554837
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | -- intersect: 17437672212.95638
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | current memory leak: -9.94 B/s (using 40 data points, chi2=0.04)
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | could have reported an average CPU frequency of 2814 MHz (5 samples)
[2025-07-28 08:17:06] 2025-07-28 12:16:34,591 | INFO     | ..............................
[2025-07-28 08:17:06] 2025-07-28 12:16:34,592 | INFO     | . Timing measurements:
[2025-07-28 08:17:06] 2025-07-28 12:16:34,592 | INFO     | . get job = 0 s
[2025-07-28 08:17:06] 2025-07-28 12:16:34,592 | INFO     | . initial setup = 2 s
[2025-07-28 08:17:06] 2025-07-28 12:16:34,592 | INFO     | . payload setup = 4 s
[2025-07-28 08:17:06] 2025-07-28 12:16:34,592 | INFO     | . stage-in = 0 s
[2025-07-28 08:17:06] 2025-07-28 12:16:34,592 | INFO     | . payload execution = 2837 s
[2025-07-28 08:17:06] 2025-07-28 12:16:34,592 | INFO     | . stage-out = 0 s
[2025-07-28 08:17:06] 2025-07-28 12:16:34,592 | INFO     | . log creation = 0 s
[2025-07-28 08:17:06] 2025-07-28 12:16:34,592 | INFO     | ..............................
[2025-07-28 08:17:06] 2025-07-28 12:16:34,633 | INFO     | 
[2025-07-28 08:17:06] 2025-07-28 12:16:34,633 | INFO     | job summary report
[2025-07-28 08:17:06] 2025-07-28 12:16:34,633 | INFO     | --------------------------------------------------
[2025-07-28 08:17:06] 2025-07-28 12:16:34,633 | INFO     | PanDA job id: 6748615111
[2025-07-28 08:17:06] 2025-07-28 12:16:34,633 | INFO     | task id: 45758813
[2025-07-28 08:17:06] 2025-07-28 12:16:34,633 | INFO     | errors: (none)
[2025-07-28 08:17:06] 2025-07-28 12:16:34,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 08:17:06] 2025-07-28 12:16:34,633 | INFO     | pilot state: finished 
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | transexitcode: 0
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | exeerrorcode: 0
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | exeerrordiag: 
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | exitcode: 0
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | exitmsg: OK
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | cpuconsumptiontime: 21262 s
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | nevents: 400
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | neventsw: 0
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | pid: 3199470
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | pgrp: 3199470
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | corecount: 8
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | event service: False
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | sizes: {0: 2397405, 3: 2397667, 11: 2397695, 2845: 2423040, 2846: 2432038, 2848: 2432094, 2852: 2432448}
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | --------------------------------------------------
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | 
[2025-07-28 08:17:06] 2025-07-28 12:16:34,634 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 08:17:06] 2025-07-28 12:16:34,646 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 08:17:06] 2025-07-28 12:16:34,647 | INFO     | job 6748615111 has completed (purged errors)
[2025-07-28 08:17:06] 2025-07-28 12:16:34,648 | INFO     | overall cleanup function is called
[2025-07-28 08:17:06] 2025-07-28 12:16:35,655 | INFO     | --- collectZombieJob: --- 10, [3199470]
[2025-07-28 08:17:06] 2025-07-28 12:16:35,655 | INFO     | zombie collector waiting for pid 3199470
[2025-07-28 08:17:06] 2025-07-28 12:16:35,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 08:17:06] 2025-07-28 12:16:35,655 | INFO     | collected zombie processes
[2025-07-28 08:17:06] 2025-07-28 12:16:35,655 | INFO     | will attempt to kill all subprocesses of pid=3199470
[2025-07-28 08:17:06] 2025-07-28 12:16:35,817 | INFO     | process IDs to be killed: [3199470] (in reverse order)
[2025-07-28 08:17:06] 2025-07-28 12:16:35,872 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 08:17:06] 2025-07-28 12:16:35,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 08:17:06] 2025-07-28 12:16:35,877 | INFO     | did not find any defunct processes belonging to 3199470
[2025-07-28 08:17:06] 2025-07-28 12:16:35,881 | INFO     | did not find any defunct processes belonging to 3199470
[2025-07-28 08:17:06] 2025-07-28 12:16:35,881 | INFO     | ready for new job
[2025-07-28 08:17:06] 2025-07-28 12:16:35,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 08:17:06] 2025-07-28 12:16:35,882 | INFO     | ***************************************
[2025-07-28 08:17:06] 2025-07-28 12:16:35,882 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 08:17:06] 2025-07-28 12:16:35,882 | INFO     | ***************************************
[2025-07-28 08:17:06] 2025-07-28 12:16:35,882 | INFO     | 
[2025-07-28 08:17:06] 2025-07-28 12:16:35,885 | INFO     | architecture information:
[2025-07-28 08:17:06] 2025-07-28 12:16:35,886 | INFO     | executing command: cat /etc/os-release
[2025-07-28 08:17:06] 2025-07-28 12:16:35,894 | INFO     | cat /etc/os-release:
[2025-07-28 08:17:06] NAME="CentOS Linux"
[2025-07-28 08:17:06] VERSION="7 (Core)"
[2025-07-28 08:17:06] ID="centos"
[2025-07-28 08:17:06] ID_LIKE="rhel fedora"
[2025-07-28 08:17:06] VERSION_ID="7"
[2025-07-28 08:17:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 08:17:06] ANSI_COLOR="0;31"
[2025-07-28 08:17:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 08:17:06] HOME_URL="https://www.centos.org/"
[2025-07-28 08:17:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 08:17:06] 
[2025-07-28 08:17:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 08:17:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 08:17:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 08:17:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 08:17:06] 
[2025-07-28 08:17:06] 2025-07-28 12:16:35,894 | INFO     | ***************************************
[2025-07-28 08:17:06] 2025-07-28 12:16:36,397 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 08:17:06] 2025-07-28 12:16:36,408 | INFO     | sufficient remaining disk space (129530593280 B)
[2025-07-28 08:17:06] 2025-07-28 12:16:36,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 08:17:06] 2025-07-28 12:16:36,408 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 08:17:06] 2025-07-28 12:16:36,408 | INFO     | update_server=False
[2025-07-28 08:17:06] 2025-07-28 12:16:36,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 08:17:06] 2025-07-28 12:16:36,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 08:17:06] 2025-07-28 12:16:36,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 08:17:06] 2025-07-28 12:16:36,476 | INFO     | aborting loop
[2025-07-28 08:17:06] 2025-07-28 12:16:36,942 | INFO     | all data control threads have been joined
[2025-07-28 08:17:06] 2025-07-28 12:16:37,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 08:17:06] 2025-07-28 12:16:37,112 | INFO     | all payload control threads have been joined
[2025-07-28 08:17:06] 2025-07-28 12:16:37,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 08:17:06] 2025-07-28 12:16:37,414 | INFO     | [job] retrieve thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:37,414 | INFO     | [job] queue monitor thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:37,429 | INFO     | [payload] validate_post thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:37,481 | INFO     | [job] job monitor thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:37,840 | INFO     | [job] validate thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:37,922 | INFO     | [data] copytool_in thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:37,922 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:37,922 | INFO     | all job control threads have been joined
[2025-07-28 08:17:06] 2025-07-28 12:16:37,948 | INFO     | [data] control thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:37,983 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:38,118 | INFO     | [payload] control thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:38,201 | INFO     | [payload] failed_post thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:38,392 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:38,928 | INFO     | [job] control thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:39,243 | INFO     | [data] copytool_out thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:41,111 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:46,669 | INFO     | job.realtimelogging is not enabled
[2025-07-28 08:17:06] 2025-07-28 12:16:47,675 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 08:17:06] 2025-07-28 12:16:49,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640818681664)>', '<ExcThread(monitor, started 139640031921920)>']
[2025-07-28 08:17:06] 2025-07-28 12:16:54,630 | INFO     | all workflow threads have been joined
[2025-07-28 08:17:06] 2025-07-28 12:16:54,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 08:17:06] 2025-07-28 12:16:54,631 | INFO     | traces error code: 0
[2025-07-28 08:17:06] 2025-07-28 12:16:54,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 08:17:06] 2025-07-28 12:17:06,630 | INFO     | PID=3192886 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 08:17:06] 2025-07-28 12:17:06,630 | INFO     | .. there are 2 such processes running
[2025-07-28 08:17:06] 2025-07-28 12:17:06,630 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 08:17:06] 2025-07-28 12:17:06,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 08:17:06] 2025-07-28 12:17:06,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 08:17:06] 2025-07-28 12:17:06,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 08:17:06] 2025-07-28 12:17:06,631 | INFO     | [monitor] control thread has ended
[2025-07-28 08:17:06] 2025-07-28 12:17:06,697 [wrapper] ==== pilot stdout END ====
[2025-07-28 08:17:06] 2025-07-28 12:17:06,699 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 08:17:06] 2025-07-28 12:17:06,702 [wrapper] pilotpid: 3192886
[2025-07-28 08:17:06] 2025-07-28 12:17:06,703 [wrapper] Pilot exit status: 0
[2025-07-28 08:17:06] 2025-07-28 12:17:06,713 [wrapper] pandaids: 6748615111
[2025-07-28 08:17:06] 2025-07-28 12:17:06,753 [wrapper] cleanup supervisor_pilot 3240592 3192887
[2025-07-28 08:17:06] 2025-07-28 12:17:06,756 [wrapper] Test setup, not cleaning
[2025-07-28 08:17:06] 2025-07-28 12:17:06,758 [wrapper] apfmon messages muted
[2025-07-28 08:17:06] 2025-07-28 12:17:06,761 [wrapper] ==== wrapper stdout END ====
[2025-07-28 08:17:06] 2025-07-28 12:17:06,763 [wrapper] ==== wrapper stderr END ====
[2025-07-28 08:17:06]  *** Error codes and diagnostics ***
[2025-07-28 08:17:06]     "exeErrorCode": 0,
[2025-07-28 08:17:06]     "exeErrorDiag": "",
[2025-07-28 08:17:06]     "pilotErrorCode": 0,
[2025-07-28 08:17:06]     "pilotErrorDiag": "",
[2025-07-28 08:17:06]  *** Listing of results directory ***
[2025-07-28 08:17:06] total 402572
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas    530466 Jul 28 07:02 pilot3.tar.gz
[2025-07-28 08:17:06] -rwx------. 1 boincer umatlas     36292 Jul 28 07:28 runpilot2-wrapper.sh
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas      5112 Jul 28 07:28 queuedata.json
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas       100 Jul 28 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 08:17:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 07:28 run_atlas
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas       105 Jul 28 07:28 job.xml
[2025-07-28 08:17:06] -rw-r--r--. 2 boincer umatlas 238864413 Jul 28 07:28 EVNT.45758811._000002.pool.root.1
[2025-07-28 08:17:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 07:28 start_atlas.sh
[2025-07-28 08:17:06] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 07:28 shared
[2025-07-28 08:17:06] -rw-r--r--. 2 boincer umatlas    542875 Jul 28 07:28 input.tar.gz
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas         0 Jul 28 07:28 boinc_lockfile
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas      2548 Jul 28 07:28 pandaJob.out
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas    978460 Jul 28 07:28 agis_schedconf.cvmfs.json
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas   1593052 Jul 28 07:28 agis_ddmendpoints.agis.ALL.json
[2025-07-28 08:17:06] drwx------. 4 boincer umatlas      4096 Jul 28 07:28 pilot3
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas      6946 Jul 28 08:11 init_data.xml
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas 168245269 Jul 28 08:16 HITS.45758813._000129.pool.root.1
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas       529 Jul 28 08:16 boinc_task_state.xml
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas      1017 Jul 28 08:16 memory_monitor_summary.json
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas        95 Jul 28 08:16 pilot_heartbeat.json
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas    316321 Jul 28 08:16 log.45758813._000129.job.log.tgz.1
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas      7737 Jul 28 08:16 heartbeat.json
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas        27 Jul 28 08:17 wrapper_checkpoint.txt
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 08:17 boinc_mmap_file
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas       822 Jul 28 08:17 pilotlog.txt
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas    306924 Jul 28 08:17 log.45758813._000129.job.log.1
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas       357 Jul 28 08:17 output.list
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas       620 Jul 28 08:17 runtime_log
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas    645120 Jul 28 08:17 result.tar.gz
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas      8655 Jul 28 08:17 runtime_log.err
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas       649 Jul 28 08:17 pp8LDmmCb07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsdWLDmZ2Odvm.diag
[2025-07-28 08:17:06] -rw-r--r--. 1 boincer umatlas     21464 Jul 28 08:17 stderr.txt
[2025-07-28 08:17:06] HITS file was successfully produced:
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas 168245269 Jul 28 08:16 shared/HITS.pool.root.1
[2025-07-28 08:17:06]  *** Contents of shared directory: ***
[2025-07-28 08:17:06] total 398760
[2025-07-28 08:17:06] -rw-r--r--. 2 boincer umatlas 238864413 Jul 28 07:28 ATLAS.root_0
[2025-07-28 08:17:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 07:28 start_atlas.sh
[2025-07-28 08:17:06] -rw-r--r--. 2 boincer umatlas    542875 Jul 28 07:28 input.tar.gz
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas 168245269 Jul 28 08:16 HITS.pool.root.1
[2025-07-28 08:17:06] -rw-------. 1 boincer umatlas    645120 Jul 28 08:17 result.tar.gz
08:17:08 (3189174): run_atlas exited; CPU time 21284.863417
08:17:08 (3189174): called boinc_finish(0)

</stderr_txt>
]]>

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