Name 1qqNDmWIpz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSS0KDmzF29To_2
Workunit 233805373
Created 28 Jul 2025, 10:36:59 UTC
Sent 28 Jul 2025, 10:37:03 UTC
Report deadline 5 Aug 2025, 10:37:03 UTC
Received 28 Jul 2025, 13:53:02 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10856806
Run time 2 hours 18 min 15 sec
CPU time 15 hours 8 min 40 sec
Validate state Valid
Credit 584.07
Device peak FLOPS 29.20 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.57 GB
Peak swap size 31.65 GB
Peak disk usage 492.98 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:30:57 (406191): wrapper (7.7.26015): starting
07:30:57 (406191): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 07:30:57] Arguments: --nthreads 12
[2025-07-28 07:30:57] Threads: 12
[2025-07-28 07:30:57] Checking for CVMFS
[2025-07-28 07:30:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 07:30:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 07:30:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 07:30:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 07:30:58] 2.13.0.0 633399 19746 322224 148845 2 336 17904994 32935937 11339 16776704 1 38548963 99.549 81607891 30922 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 07:30:58] CVMFS is ok
[2025-07-28 07:30:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 07:30:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 07:30:58] Further information can be found at the LHC@home message board.
[2025-07-28 07:30:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 07:30:58] Checking for apptainer binary...
[2025-07-28 07:30:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 07:30:58] Running /usr/bin/apptainer --version
[2025-07-28 07:30:58] apptainer version 1.4.1-1.el9
[2025-07-28 07:30:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 07:30:58] c6-6-39-1.aglt2.org
[2025-07-28 07:30:58] apptainer works
[2025-07-28 07:30:58] Set ATHENA_PROC_NUMBER=12
[2025-07-28 07:30:58] Set ATHENA_CORE_NUMBER=12
[2025-07-28 07:30:58] Starting ATLAS job with PandaID=6745100150
[2025-07-28 07:30:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 09:49:33]  *** The last 200 lines of the pilot log: ***
[2025-07-28 09:49:33] 2025-07-28 13:48:59,669 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 09:49:33] 2025-07-28 13:48:59,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 09:49:33] 2025-07-28 13:48:59,670 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 09:49:33] 2025-07-28 13:48:59,670 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 09:49:33] 2025-07-28 13:48:59,674 | INFO     | fitting pss+swap vs Time
[2025-07-28 09:49:33] 2025-07-28 13:48:59,675 | INFO     | sum of square deviations: 762975578.3703679
[2025-07-28 09:49:33] 2025-07-28 13:48:59,676 | INFO     | sum of deviations: 24403576510.51853
[2025-07-28 09:49:33] 2025-07-28 13:48:59,676 | INFO     | mean x: 1753706395.1851852
[2025-07-28 09:49:33] 2025-07-28 13:48:59,676 | INFO     | mean y: 2337647.2592592593
[2025-07-28 09:49:33] 2025-07-28 13:48:59,676 | INFO     | -- intersect: -56089507760.55364
[2025-07-28 09:49:33] 2025-07-28 13:48:59,676 | INFO     | intersect: -56089507760.55364
[2025-07-28 09:49:33] 2025-07-28 13:48:59,677 | INFO     | chi2: 2.011515124409526
[2025-07-28 09:49:33] 2025-07-28 13:48:59,677 | INFO     | sum of square deviations: 681275741.4230744
[2025-07-28 09:49:33] 2025-07-28 13:48:59,677 | INFO     | sum of deviations: 23504053398.153835
[2025-07-28 09:49:33] 2025-07-28 13:48:59,678 | INFO     | mean x: 1753706242.6538463
[2025-07-28 09:49:33] 2025-07-28 13:48:59,678 | INFO     | mean y: 2335936.0923076924
[2025-07-28 09:49:33] 2025-07-28 13:48:59,678 | INFO     | -- intersect: -60500633222.78527
[2025-07-28 09:49:33] 2025-07-28 13:48:59,678 | INFO     | intersect: -60500633222.78527
[2025-07-28 09:49:33] 2025-07-28 13:48:59,678 | INFO     | chi2: 2.0117149419723592
[2025-07-28 09:49:33] 2025-07-28 13:48:59,678 | INFO     | current chi2=2.0117149419723592 (change=-0.00993368433617554 %)
[2025-07-28 09:49:33] 2025-07-28 13:48:59,678 | INFO     | right removable region: 129
[2025-07-28 09:49:33] 2025-07-28 13:48:59,679 | INFO     | sum of square deviations: 681301305.6923068
[2025-07-28 09:49:33] 2025-07-28 13:48:59,679 | INFO     | sum of deviations: -1350775088.307694
[2025-07-28 09:49:33] 2025-07-28 13:48:59,679 | INFO     | mean x: 1753706547.6923077
[2025-07-28 09:49:33] 2025-07-28 13:48:59,679 | INFO     | mean y: 2385372.9923076923
[2025-07-28 09:49:33] 2025-07-28 13:48:59,679 | INFO     | -- intersect: 3479353781.878196
[2025-07-28 09:49:33] 2025-07-28 13:48:59,680 | INFO     | intersect: 3479353781.878196
[2025-07-28 09:49:33] 2025-07-28 13:48:59,680 | INFO     | chi2: 0.18858830213685635
[2025-07-28 09:49:33] 2025-07-28 13:48:59,680 | INFO     | current chi2=0.18858830213685635 (change=90.62456454598043 %)
[2025-07-28 09:49:33] 2025-07-28 13:48:59,680 | INFO     | sum of square deviations: 605673657.9999999
[2025-07-28 09:49:33] 2025-07-28 13:48:59,681 | INFO     | sum of deviations: -6149291980.200002
[2025-07-28 09:49:33] 2025-07-28 13:48:59,681 | INFO     | mean x: 1753706700.2
[2025-07-28 09:49:33] 2025-07-28 13:48:59,681 | INFO     | mean y: 2394852.008
[2025-07-28 09:49:33] 2025-07-28 13:48:59,681 | INFO     | -- intersect: 17807452748.65318
[2025-07-28 09:49:33] 2025-07-28 13:48:59,681 | INFO     | intersect: 17807452748.65318
[2025-07-28 09:49:33] 2025-07-28 13:48:59,682 | INFO     | chi2: 0.06830050619993067
[2025-07-28 09:49:33] 2025-07-28 13:48:59,682 | INFO     | current chi2=0.06830050619993067 (change=63.78327530073113 %)
[2025-07-28 09:49:33] 2025-07-28 13:48:59,682 | INFO     | sum of square deviations: 535867697.2000002
[2025-07-28 09:49:33] 2025-07-28 13:48:59,683 | INFO     | sum of deviations: -5537017500.3
[2025-07-28 09:49:33] 2025-07-28 13:48:59,683 | INFO     | mean x: 1753706852.7
[2025-07-28 09:49:33] 2025-07-28 13:48:59,683 | INFO     | mean y: 2393466.908333333
[2025-07-28 09:49:33] 2025-07-28 13:48:59,684 | INFO     | -- intersect: 18123107935.300312
[2025-07-28 09:49:33] 2025-07-28 13:48:59,684 | INFO     | intersect: 18123107935.300312
[2025-07-28 09:49:33] 2025-07-28 13:48:59,684 | INFO     | chi2: 0.06562246983269378
[2025-07-28 09:49:33] 2025-07-28 13:48:59,684 | INFO     | current chi2=0.06562246983269378 (change=3.9209612288929225 %)
[2025-07-28 09:49:33] 2025-07-28 13:48:59,684 | INFO     | left removable region: 30
[2025-07-28 09:49:33] 2025-07-28 13:48:59,684 | INFO     | sum of square deviations: 300878976.08080745
[2025-07-28 09:49:33] 2025-07-28 13:48:59,685 | INFO     | sum of deviations: -1087596726.1212115
[2025-07-28 09:49:33] 2025-07-28 13:48:59,685 | INFO     | mean x: 1753707127.1717172
[2025-07-28 09:49:33] 2025-07-28 13:48:59,685 | INFO     | mean y: 2380859.242424242
[2025-07-28 09:49:33] 2025-07-28 13:48:59,685 | INFO     | -- intersect: 6341561332.839695
[2025-07-28 09:49:33] 2025-07-28 13:48:59,685 | INFO     | intersect: 6341561332.839695
[2025-07-28 09:49:33] 2025-07-28 13:48:59,685 | INFO     | chi2: 0.05019743427072926
[2025-07-28 09:49:33] 2025-07-28 13:48:59,686 | INFO     | -- intersect: 6341561332.839695
[2025-07-28 09:49:33] 2025-07-28 13:48:59,686 | INFO     | current memory leak: -3.61 B/s (using 99 data points, chi2=0.05)
[2025-07-28 09:49:33] 2025-07-28 13:48:59,686 | INFO     | could have reported an average CPU frequency of 2543 MHz (8 samples)
[2025-07-28 09:49:33] 2025-07-28 13:48:59,687 | INFO     | ..............................
[2025-07-28 09:49:33] 2025-07-28 13:48:59,687 | INFO     | . Timing measurements:
[2025-07-28 09:49:33] 2025-07-28 13:48:59,687 | INFO     | . get job = 0 s
[2025-07-28 09:49:33] 2025-07-28 13:48:59,687 | INFO     | . initial setup = 3 s
[2025-07-28 09:49:33] 2025-07-28 13:48:59,687 | INFO     | . payload setup = 10 s
[2025-07-28 09:49:33] 2025-07-28 13:48:59,687 | INFO     | . stage-in = 0 s
[2025-07-28 09:49:33] 2025-07-28 13:48:59,687 | INFO     | . payload execution = 8223 s
[2025-07-28 09:49:33] 2025-07-28 13:48:59,687 | INFO     | . stage-out = 0 s
[2025-07-28 09:49:33] 2025-07-28 13:48:59,687 | INFO     | . log creation = 0 s
[2025-07-28 09:49:33] 2025-07-28 13:48:59,688 | INFO     | ..............................
[2025-07-28 09:49:33] 2025-07-28 13:49:00,133 | INFO     | 
[2025-07-28 09:49:33] 2025-07-28 13:49:00,133 | INFO     | job summary report
[2025-07-28 09:49:33] 2025-07-28 13:49:00,133 | INFO     | --------------------------------------------------
[2025-07-28 09:49:33] 2025-07-28 13:49:00,133 | INFO     | PanDA job id: 6745100150
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | task id: 45743349
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | errors: (none)
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | pilot state: finished 
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | transexitcode: 0
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | exeerrorcode: 0
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | exeerrordiag: 
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | exitcode: 0
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | exitmsg: OK
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | cpuconsumptiontime: 54009 s
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | nevents: 400
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | neventsw: 0
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | pid: 418225
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | pgrp: 418225
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | corecount: 12
[2025-07-28 09:49:33] 2025-07-28 13:49:00,134 | INFO     | event service: False
[2025-07-28 09:49:33] 2025-07-28 13:49:00,135 | INFO     | sizes: {0: 2397475, 7: 2397737, 11: 2397765, 8237: 2425642, 8239: 2434640, 8241: 2434696, 8249: 2435018}
[2025-07-28 09:49:33] 2025-07-28 13:49:00,135 | INFO     | --------------------------------------------------
[2025-07-28 09:49:33] 2025-07-28 13:49:00,135 | INFO     | 
[2025-07-28 09:49:33] 2025-07-28 13:49:00,135 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 09:49:33] 2025-07-28 13:49:00,160 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,160 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,161 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,162 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,162 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,162 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,162 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,162 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 09:49:33] 2025-07-28 13:49:00,162 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,162 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 09:49:33] 2025-07-28 13:49:00,163 | INFO     | job 6745100150 has completed (purged errors)
[2025-07-28 09:49:33] 2025-07-28 13:49:00,163 | INFO     | overall cleanup function is called
[2025-07-28 09:49:33] 2025-07-28 13:49:01,172 | INFO     | --- collectZombieJob: --- 10, [418225]
[2025-07-28 09:49:33] 2025-07-28 13:49:01,173 | INFO     | zombie collector waiting for pid 418225
[2025-07-28 09:49:33] 2025-07-28 13:49:01,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 09:49:33] 2025-07-28 13:49:01,173 | INFO     | collected zombie processes
[2025-07-28 09:49:33] 2025-07-28 13:49:01,173 | INFO     | will attempt to kill all subprocesses of pid=418225
[2025-07-28 09:49:33] 2025-07-28 13:49:01,496 | INFO     | process IDs to be killed: [418225] (in reverse order)
[2025-07-28 09:49:33] 2025-07-28 13:49:01,631 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 09:49:33] 2025-07-28 13:49:01,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 09:49:33] 2025-07-28 13:49:01,647 | INFO     | did not find any defunct processes belonging to 418225
[2025-07-28 09:49:33] 2025-07-28 13:49:01,660 | INFO     | did not find any defunct processes belonging to 418225
[2025-07-28 09:49:33] 2025-07-28 13:49:01,661 | INFO     | ready for new job
[2025-07-28 09:49:33] 2025-07-28 13:49:01,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 09:49:33] 2025-07-28 13:49:01,663 | INFO     | ***************************************
[2025-07-28 09:49:33] 2025-07-28 13:49:01,663 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 09:49:33] 2025-07-28 13:49:01,663 | INFO     | ***************************************
[2025-07-28 09:49:33] 2025-07-28 13:49:01,663 | INFO     | 
[2025-07-28 09:49:33] 2025-07-28 13:49:01,681 | INFO     | architecture information:
[2025-07-28 09:49:33] 2025-07-28 13:49:01,682 | INFO     | executing command: cat /etc/os-release
[2025-07-28 09:49:33] 2025-07-28 13:49:01,703 | INFO     | cat /etc/os-release:
[2025-07-28 09:49:33] NAME="CentOS Linux"
[2025-07-28 09:49:33] VERSION="7 (Core)"
[2025-07-28 09:49:33] ID="centos"
[2025-07-28 09:49:33] ID_LIKE="rhel fedora"
[2025-07-28 09:49:33] VERSION_ID="7"
[2025-07-28 09:49:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 09:49:33] ANSI_COLOR="0;31"
[2025-07-28 09:49:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 09:49:33] HOME_URL="https://www.centos.org/"
[2025-07-28 09:49:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 09:49:33] 
[2025-07-28 09:49:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 09:49:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 09:49:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 09:49:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 09:49:33] 
[2025-07-28 09:49:33] 2025-07-28 13:49:01,704 | INFO     | ***************************************
[2025-07-28 09:49:33] 2025-07-28 13:49:02,208 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 09:49:33] 2025-07-28 13:49:02,288 | INFO     | sufficient remaining disk space (76673974272 B)
[2025-07-28 09:49:33] 2025-07-28 13:49:02,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 09:49:33] 2025-07-28 13:49:02,288 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 09:49:33] 2025-07-28 13:49:02,289 | INFO     | update_server=False
[2025-07-28 09:49:33] 2025-07-28 13:49:02,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 09:49:33] 2025-07-28 13:49:02,289 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:49:33] 2025-07-28 13:49:02,289 | INFO     | aborting loop
[2025-07-28 09:49:33] 2025-07-28 13:49:02,519 | INFO     | all payload control threads have been joined
[2025-07-28 09:49:33] 2025-07-28 13:49:02,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 09:49:33] 2025-07-28 13:49:02,951 | INFO     | all job control threads have been joined
[2025-07-28 09:49:33] 2025-07-28 13:49:03,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 09:49:33] 2025-07-28 13:49:03,128 | INFO     | all data control threads have been joined
[2025-07-28 09:49:33] 2025-07-28 13:49:03,294 | INFO     | [job] retrieve thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:03,295 | INFO     | [job] job monitor thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:03,368 | INFO     | [data] copytool_in thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:03,433 | INFO     | [payload] failed_post thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:03,500 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:03,525 | INFO     | [payload] control thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:03,675 | INFO     | [job] validate thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:03,861 | INFO     | [payload] validate_post thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:03,958 | INFO     | [job] control thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:04,134 | INFO     | [data] control thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:04,307 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:04,425 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:04,574 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:04,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:49:33] 2025-07-28 13:49:05,110 | INFO     | [data] copytool_out thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:05,811 | INFO     | [job] queue monitor thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:06,592 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 09:49:33] 2025-07-28 13:49:08,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160699672384)>', '<ExcThread(monitor, started 140160075294464)>']
[2025-07-28 09:49:33] 2025-07-28 13:49:13,712 | INFO     | all workflow threads have been joined
[2025-07-28 09:49:33] 2025-07-28 13:49:13,713 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 09:49:33] 2025-07-28 13:49:13,713 | INFO     | traces error code: 0
[2025-07-28 09:49:33] 2025-07-28 13:49:13,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 09:49:33] 2025-07-28 13:49:32,787 | INFO     | PID=410421 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 09:49:33] 2025-07-28 13:49:32,788 | INFO     | .. there are 14 such processes running
[2025-07-28 09:49:33] 2025-07-28 13:49:32,788 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 09:49:33] 2025-07-28 13:49:32,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 09:49:33] 2025-07-28 13:49:32,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 09:49:33] 2025-07-28 13:49:32,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 09:49:33] 2025-07-28 13:49:32,788 | INFO     | [monitor] control thread has ended
[2025-07-28 09:49:33] 2025-07-28 13:49:33,003 [wrapper] ==== pilot stdout END ====
[2025-07-28 09:49:33] 2025-07-28 13:49:33,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 09:49:33] 2025-07-28 13:49:33,011 [wrapper] pilotpid: 410421
[2025-07-28 09:49:33] 2025-07-28 13:49:33,013 [wrapper] Pilot exit status: 0
[2025-07-28 09:49:33] 2025-07-28 13:49:33,027 [wrapper] pandaids: 6745100150
[2025-07-28 09:49:33] 2025-07-28 13:49:33,095 [wrapper] cleanup supervisor_pilot 1019040 410422
[2025-07-28 09:49:33] 2025-07-28 13:49:33,098 [wrapper] Test setup, not cleaning
[2025-07-28 09:49:33] 2025-07-28 13:49:33,101 [wrapper] apfmon messages muted
[2025-07-28 09:49:33] 2025-07-28 13:49:33,105 [wrapper] ==== wrapper stdout END ====
[2025-07-28 09:49:33] 2025-07-28 13:49:33,109 [wrapper] ==== wrapper stderr END ====
[2025-07-28 09:49:33]  *** Error codes and diagnostics ***
[2025-07-28 09:49:33]     "exeErrorCode": 0,
[2025-07-28 09:49:33]     "exeErrorDiag": "",
[2025-07-28 09:49:33]     "pilotErrorCode": 0,
[2025-07-28 09:49:33]     "pilotErrorDiag": "",
[2025-07-28 09:49:33]  *** Listing of results directory ***
[2025-07-28 09:49:33] total 357664
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 04:04 pilot3.tar.gz
[2025-07-28 09:49:33] -rwx------. 1 boincer umatlas     36292 Jul 26 04:18 runpilot2-wrapper.sh
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 04:18 queuedata.json
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas       100 Jul 28 07:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 09:49:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 07:30 run_atlas
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas       105 Jul 28 07:30 job.xml
[2025-07-28 09:49:33] -rw-r--r--. 2 boincer umatlas 147994154 Jul 28 07:30 EVNT.45743347._001971.pool.root.1
[2025-07-28 09:49:33] -rw-r--r--. 2 boincer umatlas    542893 Jul 28 07:30 input.tar.gz
[2025-07-28 09:49:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 07:30 start_atlas.sh
[2025-07-28 09:49:33] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 07:30 shared
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas         0 Jul 28 07:30 boinc_lockfile
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas      2563 Jul 28 07:30 pandaJob.out
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas    978460 Jul 28 07:31 agis_schedconf.cvmfs.json
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas   1593052 Jul 28 07:31 agis_ddmendpoints.agis.ALL.json
[2025-07-28 09:49:33] drwx------. 4 boincer umatlas      4096 Jul 28 07:31 pilot3
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas 212088292 Jul 28 09:48 HITS.45743349._034770.pool.root.1
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas       530 Jul 28 09:48 boinc_task_state.xml
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas      1037 Jul 28 09:48 memory_monitor_summary.json
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas    404061 Jul 28 09:48 log.45743349._034770.job.log.tgz.1
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas        95 Jul 28 09:48 pilot_heartbeat.json
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas      7822 Jul 28 09:48 heartbeat.json
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas      6842 Jul 28 09:49 init_data.xml
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 09:49 boinc_mmap_file
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas        27 Jul 28 09:49 wrapper_checkpoint.txt
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas       822 Jul 28 09:49 pilotlog.txt
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas    742807 Jul 28 09:49 log.45743349._034770.job.log.1
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas       357 Jul 28 09:49 output.list
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas       620 Jul 28 09:49 runtime_log
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas   1167360 Jul 28 09:49 result.tar.gz
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 09:49 runtime_log.err
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas       655 Jul 28 09:49 1qqNDmWIpz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSS0KDmzF29To.diag
[2025-07-28 09:49:33] -rw-r--r--. 1 boincer umatlas     20957 Jul 28 09:49 stderr.txt
[2025-07-28 09:49:33] HITS file was successfully produced:
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas 212088292 Jul 28 09:48 shared/HITS.pool.root.1
[2025-07-28 09:49:33]  *** Contents of shared directory: ***
[2025-07-28 09:49:33] total 353340
[2025-07-28 09:49:33] -rw-r--r--. 2 boincer umatlas 147994154 Jul 28 07:30 ATLAS.root_0
[2025-07-28 09:49:33] -rw-r--r--. 2 boincer umatlas    542893 Jul 28 07:30 input.tar.gz
[2025-07-28 09:49:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 07:30 start_atlas.sh
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas 212088292 Jul 28 09:48 HITS.pool.root.1
[2025-07-28 09:49:33] -rw-------. 1 boincer umatlas   1167360 Jul 28 09:49 result.tar.gz
09:49:34 (406191): run_atlas exited; CPU time 54209.838746
09:49:34 (406191): called boinc_finish(0)

</stderr_txt>
]]>


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