Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:35:50 (323107): wrapper (7.7.26015): starting
05:35:50 (323107): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 05:35:50] Arguments: --nthreads 4
[2025-07-28 05:35:50] Threads: 4
[2025-07-28 05:35:50] Checking for CVMFS
[2025-07-28 05:35:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 05:35:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 05:35:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 05:35:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 05:35:50] 2.13.1.0 322385 0 26036 148843 3 5 3265906 4096001 28 130560 0 1629 99.819 2333 4001 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.174:3128 1
[2025-07-28 05:35:50] CVMFS is ok
[2025-07-28 05:35:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 05:35:50] Checking for apptainer binary...
[2025-07-28 05:35:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 05:35:50] Running /usr/bin/apptainer --version
[2025-07-28 05:35:50] apptainer version 1.4.1
[2025-07-28 05:35:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 05:35:50] X-32-ubuntu
[2025-07-28 05:35:50] apptainer works
[2025-07-28 05:35:50] Set ATHENA_PROC_NUMBER=4
[2025-07-28 05:35:50] Set ATHENA_CORE_NUMBER=4
[2025-07-28 05:35:50] Starting ATLAS job with PandaID=6745096167
[2025-07-28 05:35:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 06:46:26]  *** The last 200 lines of the pilot log: ***
[2025-07-28 06:46:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-28 06:46:26]  is_altstaged=None
[2025-07-28 06:46:26]  is_tar=False
[2025-07-28 06:46:26]  lfn=log.45743349._032270.job.log.tgz.1
[2025-07-28 06:46:26]  mtime=0
[2025-07-28 06:46:26]  protocol_id=None
[2025-07-28 06:46:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 06:46:26]  replicas=None
[2025-07-28 06:46:26]  scope=mc23_13p6TeV
[2025-07-28 06:46:26]  status=None
[2025-07-28 06:46:26]  status_code=0
[2025-07-28 06:46:26]  storage_token=
[2025-07-28 06:46:26]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6745096167/log.45743349._032270.job.log.tgz.1
[2025-07-28 06:46:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/33/log.45743349._032270.job.log.tgz.1
[2025-07-28 06:46:26]  workdir=None
[2025-07-28 06:46:26] ]
[2025-07-28 06:46:26] 2025-07-28 10:45:49,885 | INFO     | transferring file log.45743349._032270.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6745096167/log.45743349._032270.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 06:46:26] 2025-07-28 10:45:49,885 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6745096167/log.45743349._032270.job.log.tgz.1 /var/lib/boinc/slots/1/log.45743349._032270.job
[2025-07-28 06:46:26] 2025-07-28 10:45:49,895 | INFO     | adding to output.list: log.45743349._032270.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/33/log.45743349._032270.job.log.tg
[2025-07-28 06:46:26] 2025-07-28 10:45:49,895 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 06:46:26] 2025-07-28 10:45:49,895 | INFO     | summary of transferred files:
[2025-07-28 06:46:26] 2025-07-28 10:45:49,895 | INFO     |  -- lfn=log.45743349._032270.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 06:46:26] 2025-07-28 10:45:49,895 | INFO     | stage-out finished correctly
[2025-07-28 06:46:26] 2025-07-28 10:45:50,820 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 06:46:26] 2025-07-28 10:45:50,986 | INFO     | monitor loop #321: job 0:6745096167 is in state 'finished'
[2025-07-28 06:46:26] 2025-07-28 10:45:50,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:46:26] 2025-07-28 10:45:52,427 | INFO     | job 6745096167 has state=finished
[2025-07-28 06:46:26] 2025-07-28 10:45:52,428 | INFO     | preparing for final server update for job 6745096167 in state='finished'
[2025-07-28 06:46:26] 2025-07-28 10:45:52,428 | INFO     | this job has now completed (state=finished)
[2025-07-28 06:46:26] 2025-07-28 10:45:52,428 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 06:46:26] 2025-07-28 10:45:52,428 | INFO     | log transfer has been attempted: DONE
[2025-07-28 06:46:26] 2025-07-28 10:45:52,428 | INFO     | job 6745096167 has finished - writing final server update
[2025-07-28 06:46:26] 2025-07-28 10:45:52,429 | INFO     | total number of processed events: 400 (read)
[2025-07-28 06:46:26] 2025-07-28 10:45:52,431 | INFO     | executing command: lscpu
[2025-07-28 06:46:26] 2025-07-28 10:45:52,459 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 06:46:26] 2025-07-28 10:45:53,489 | INFO     | monitor loop #322: job 0:6745096167 is in state 'finished'
[2025-07-28 06:46:26] 2025-07-28 10:45:53,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:46:26] 2025-07-28 10:45:54,618 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 06:46:26] 2025-07-28 10:45:54,622 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2202.0970937499997
[2025-07-28 06:46:26] 2025-07-28 10:45:54,626 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6745096167/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 06:46:26] 2025-07-28 10:45:54,626 | INFO     | extracted standard info from prmon json
[2025-07-28 06:46:26] 2025-07-28 10:45:54,626 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 06:46:26] 2025-07-28 10:45:54,627 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 06:46:26] 2025-07-28 10:45:54,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 06:46:26] 2025-07-28 10:45:54,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 06:46:26] 2025-07-28 10:45:54,628 | INFO     | fitting pss+swap vs Time
[2025-07-28 06:46:26] 2025-07-28 10:45:54,628 | INFO     | sum of square deviations: 73882315.5
[2025-07-28 06:46:26] 2025-07-28 10:45:54,628 | INFO     | sum of deviations: -3407487633.0000005
[2025-07-28 06:46:26] 2025-07-28 10:45:54,628 | INFO     | mean x: 1753697540.5
[2025-07-28 06:46:26] 2025-07-28 10:45:54,628 | INFO     | mean y: 2402698.419354839
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | -- intersect: 80883769786.54572
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | intersect: 80883769786.54572
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | chi2: 0.015212733664440812
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | -- intersect: 80883769786.54572
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | current memory leak: -46.12 B/s (using 62 data points, chi2=0.02)
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | could have reported an average CPU frequency of 3452 MHz (6 samples)
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | ..............................
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | . Timing measurements:
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | . get job = 0 s
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | . initial setup = 2 s
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | . payload setup = 3 s
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | . stage-in = 0 s
[2025-07-28 06:46:26] 2025-07-28 10:45:54,629 | INFO     | . payload execution = 4172 s
[2025-07-28 06:46:26] 2025-07-28 10:45:54,630 | INFO     | . stage-out = 0 s
[2025-07-28 06:46:26] 2025-07-28 10:45:54,630 | INFO     | . log creation = 0 s
[2025-07-28 06:46:26] 2025-07-28 10:45:54,630 | INFO     | ..............................
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | 
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | job summary report
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | --------------------------------------------------
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | PanDA job id: 6745096167
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | task id: 45743349
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | errors: (none)
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | pilot state: finished 
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | transexitcode: 0
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | exeerrorcode: 0
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | exeerrordiag: 
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | exitcode: 0
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | exitmsg: OK
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | cpuconsumptiontime: 16063 s
[2025-07-28 06:46:26] 2025-07-28 10:45:54,949 | INFO     | nevents: 400
[2025-07-28 06:46:26] 2025-07-28 10:45:54,950 | INFO     | neventsw: 0
[2025-07-28 06:46:26] 2025-07-28 10:45:54,950 | INFO     | pid: 349501
[2025-07-28 06:46:26] 2025-07-28 10:45:54,950 | INFO     | pgrp: 349501
[2025-07-28 06:46:26] 2025-07-28 10:45:54,950 | INFO     | corecount: 4
[2025-07-28 06:46:26] 2025-07-28 10:45:54,950 | INFO     | event service: False
[2025-07-28 06:46:26] 2025-07-28 10:45:54,950 | INFO     | sizes: {0: 2397474, 2: 2397736, 11: 2397764, 4178: 2423817, 4179: 2423816, 4180: 2432870, 4181: 2433054, 4185: 2433248}
[2025-07-28 06:46:26] 2025-07-28 10:45:54,950 | INFO     | --------------------------------------------------
[2025-07-28 06:46:26] 2025-07-28 10:45:54,950 | INFO     | 
[2025-07-28 06:46:26] 2025-07-28 10:45:54,950 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | job 6745096167 has completed (purged errors)
[2025-07-28 06:46:26] 2025-07-28 10:45:54,970 | INFO     | overall cleanup function is called
[2025-07-28 06:46:26] 2025-07-28 10:45:55,978 | INFO     | --- collectZombieJob: --- 10, [349501]
[2025-07-28 06:46:26] 2025-07-28 10:45:55,978 | INFO     | zombie collector waiting for pid 349501
[2025-07-28 06:46:26] 2025-07-28 10:45:55,978 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 06:46:26] 2025-07-28 10:45:55,978 | INFO     | collected zombie processes
[2025-07-28 06:46:26] 2025-07-28 10:45:55,978 | INFO     | will attempt to kill all subprocesses of pid=349501
[2025-07-28 06:46:26] 2025-07-28 10:45:56,104 | INFO     | process IDs to be killed: [349501] (in reverse order)
[2025-07-28 06:46:26] 2025-07-28 10:45:56,151 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 06:46:26] 2025-07-28 10:45:56,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 06:46:26] 2025-07-28 10:45:56,155 | INFO     | did not find any defunct processes belonging to 349501
[2025-07-28 06:46:26] 2025-07-28 10:45:56,158 | INFO     | did not find any defunct processes belonging to 349501
[2025-07-28 06:46:26] 2025-07-28 10:45:56,158 | INFO     | ready for new job
[2025-07-28 06:46:26] 2025-07-28 10:45:56,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 06:46:26] 2025-07-28 10:45:56,159 | INFO     | ***************************************
[2025-07-28 06:46:26] 2025-07-28 10:45:56,159 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 06:46:26] 2025-07-28 10:45:56,159 | INFO     | ***************************************
[2025-07-28 06:46:26] 2025-07-28 10:45:56,159 | INFO     | 
[2025-07-28 06:46:26] 2025-07-28 10:45:56,161 | INFO     | architecture information:
[2025-07-28 06:46:26] 2025-07-28 10:45:56,161 | INFO     | executing command: cat /etc/os-release
[2025-07-28 06:46:26] 2025-07-28 10:45:56,172 | INFO     | cat /etc/os-release:
[2025-07-28 06:46:26] NAME="CentOS Linux"
[2025-07-28 06:46:26] VERSION="7 (Core)"
[2025-07-28 06:46:26] ID="centos"
[2025-07-28 06:46:26] ID_LIKE="rhel fedora"
[2025-07-28 06:46:26] VERSION_ID="7"
[2025-07-28 06:46:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 06:46:26] ANSI_COLOR="0;31"
[2025-07-28 06:46:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 06:46:26] HOME_URL="https://www.centos.org/"
[2025-07-28 06:46:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 06:46:26] 
[2025-07-28 06:46:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 06:46:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 06:46:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 06:46:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 06:46:26] 
[2025-07-28 06:46:26] 2025-07-28 10:45:56,173 | INFO     | ***************************************
[2025-07-28 06:46:26] 2025-07-28 10:45:56,675 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-07-28 06:46:26] 2025-07-28 10:45:56,691 | INFO     | sufficient remaining disk space (1823368806400 B)
[2025-07-28 06:46:26] 2025-07-28 10:45:56,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 06:46:26] 2025-07-28 10:45:56,691 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 06:46:26] 2025-07-28 10:45:56,692 | INFO     | update_server=False
[2025-07-28 06:46:26] 2025-07-28 10:45:56,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 06:46:26] 2025-07-28 10:45:56,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:46:26] 2025-07-28 10:45:56,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 06:46:26] 2025-07-28 10:45:56,918 | INFO     | all data control threads have been joined
[2025-07-28 06:46:26] 2025-07-28 10:45:56,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:46:26] 2025-07-28 10:45:56,998 | INFO     | aborting loop
[2025-07-28 06:46:26] 2025-07-28 10:45:57,697 | INFO     | [job] retrieve thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:57,697 | INFO     | [job] queue monitor thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:57,708 | INFO     | [payload] validate_post thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:57,754 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:57,756 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:57,923 | INFO     | [data] control thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:57,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 06:46:26] 2025-07-28 10:45:58,003 | INFO     | [job] job monitor thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:58,007 | INFO     | all job control threads have been joined
[2025-07-28 06:46:26] 2025-07-28 10:45:58,153 | INFO     | [data] copytool_in thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:58,154 | INFO     | all payload control threads have been joined
[2025-07-28 06:46:26] 2025-07-28 10:45:58,329 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:58,763 | INFO     | [payload] failed_post thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:58,986 | INFO     | [job] validate thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:59,013 | INFO     | [job] control thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:59,159 | INFO     | [payload] control thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:59,180 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:45:59,940 | INFO     | [data] copytool_out thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:46:00,888 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 06:46:26] 2025-07-28 10:46:02,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132947507865408)>', '<ExcThread(monitor, started 132947235542784)>']
[2025-07-28 06:46:26] 2025-07-28 10:46:07,340 | INFO     | all workflow threads have been joined
[2025-07-28 06:46:26] 2025-07-28 10:46:07,340 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 06:46:26] 2025-07-28 10:46:07,340 | INFO     | traces error code: 0
[2025-07-28 06:46:26] 2025-07-28 10:46:07,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 06:46:26] 2025-07-28 10:46:26,208 | INFO     | PID=330219 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 06:46:26] 2025-07-28 10:46:26,208 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 06:46:26] 2025-07-28 10:46:26,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 06:46:26] 2025-07-28 10:46:26,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 06:46:26] 2025-07-28 10:46:26,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 06:46:26] 2025-07-28 10:46:26,209 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 06:46:26] 2025-07-28 10:46:26,209 | INFO     | [monitor] control thread has ended
[2025-07-28 06:46:26] 2025-07-28 10:46:26,273 [wrapper] ==== pilot stdout END ====
[2025-07-28 06:46:26] 2025-07-28 10:46:26,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 06:46:26] 2025-07-28 10:46:26,278 [wrapper] pilotpid: 330219
[2025-07-28 06:46:26] 2025-07-28 10:46:26,280 [wrapper] Pilot exit status: 0
[2025-07-28 06:46:26] 2025-07-28 10:46:26,287 [wrapper] pandaids: 6745096167
[2025-07-28 06:46:26] 2025-07-28 10:46:26,315 [wrapper] cleanup supervisor_pilot  383564 330221
[2025-07-28 06:46:26] 2025-07-28 10:46:26,318 [wrapper] Test setup, not cleaning
[2025-07-28 06:46:26] 2025-07-28 10:46:26,320 [wrapper] apfmon messages muted
[2025-07-28 06:46:26] 2025-07-28 10:46:26,322 [wrapper] ==== wrapper stdout END ====
[2025-07-28 06:46:26] 2025-07-28 10:46:26,324 [wrapper] ==== wrapper stderr END ====
[2025-07-28 06:46:26]  *** Error codes and diagnostics ***
[2025-07-28 06:46:26]     "exeErrorCode": 0,
[2025-07-28 06:46:26]     "exeErrorDiag": "",
[2025-07-28 06:46:26]     "pilotErrorCode": 0,
[2025-07-28 06:46:26]     "pilotErrorDiag": "",
[2025-07-28 06:46:26]  *** Listing of results directory ***
[2025-07-28 06:46:26] total 356416
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc    530466 Jul 26 00:24 pilot3.tar.gz
[2025-07-28 06:46:26] -rwx------ 1 boinc boinc     36292 Jul 26 00:42 runpilot2-wrapper.sh
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc      5112 Jul 26 00:42 queuedata.json
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc       100 Jul 28 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 06:46:26] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 05:35 run_atlas
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc       105 Jul 28 05:35 job.xml
[2025-07-28 06:46:26] -rw-r--r-- 2 boinc boinc     15095 Jul 28 05:35 start_atlas.sh
[2025-07-28 06:46:26] drwxrwx--x 2 boinc boinc      4096 Jul 28 05:35 shared
[2025-07-28 06:46:26] -rw-r--r-- 2 boinc boinc    542896 Jul 28 05:35 input.tar.gz
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc      9728 Jul 28 05:35 init_data.xml
[2025-07-28 06:46:26] -rw-r--r-- 2 boinc boinc 145943331 Jul 28 05:35 EVNT.45743347._001814.pool.root.1
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc         0 Jul 28 05:35 boinc_setup_complete
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc         0 Jul 28 05:35 boinc_lockfile
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc      2562 Jul 28 05:35 pandaJob.out
[2025-07-28 06:46:26] -rw------- 1 boinc boinc    978460 Jul 28 05:35 agis_schedconf.cvmfs.json
[2025-07-28 06:46:26] -rw------- 1 boinc boinc   1593052 Jul 28 05:35 agis_ddmendpoints.agis.ALL.json
[2025-07-28 06:46:26] drwx------ 4 boinc boinc      4096 Jul 28 05:35 pilot3
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc       529 Jul 28 06:45 boinc_task_state.xml
[2025-07-28 06:46:26] -rw------- 1 boinc boinc 213815566 Jul 28 06:45 HITS.45743349._032270.pool.root.1
[2025-07-28 06:46:26] -rw------- 1 boinc boinc      1017 Jul 28 06:45 memory_monitor_summary.json
[2025-07-28 06:46:26] -rw------- 1 boinc boinc    235124 Jul 28 06:45 log.45743349._032270.job.log.tgz.1
[2025-07-28 06:46:26] -rw------- 1 boinc boinc      7733 Jul 28 06:45 heartbeat.json
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc      8192 Jul 28 06:45 boinc_mmap_file
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc        27 Jul 28 06:45 wrapper_checkpoint.txt
[2025-07-28 06:46:26] -rw------- 1 boinc boinc       816 Jul 28 06:46 pilotlog.txt
[2025-07-28 06:46:26] -rw------- 1 boinc boinc        95 Jul 28 06:46 pilot_heartbeat.json
[2025-07-28 06:46:26] -rw------- 1 boinc boinc    426630 Jul 28 06:46 log.45743349._032270.job.log.1
[2025-07-28 06:46:26] -rw------- 1 boinc boinc       357 Jul 28 06:46 output.list
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc       620 Jul 28 06:46 runtime_log
[2025-07-28 06:46:26] -rw------- 1 boinc boinc    686080 Jul 28 06:46 result.tar.gz
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc      8628 Jul 28 06:46 runtime_log.err
[2025-07-28 06:46:26] -rw------- 1 boinc boinc       642 Jul 28 06:46 MEENDmyulz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPGRLDmq4hyZm.diag
[2025-07-28 06:46:26] -rw-r--r-- 1 boinc boinc     21119 Jul 28 06:46 stderr.txt
[2025-07-28 06:46:26] HITS file was successfully produced:
[2025-07-28 06:46:26] -rw------- 1 boinc boinc 213815566 Jul 28 06:45 shared/HITS.pool.root.1
[2025-07-28 06:46:26]  *** Contents of shared directory: ***
[2025-07-28 06:46:26] total 352560
[2025-07-28 06:46:26] -rw-r--r-- 2 boinc boinc     15095 Jul 28 05:35 start_atlas.sh
[2025-07-28 06:46:26] -rw-r--r-- 2 boinc boinc    542896 Jul 28 05:35 input.tar.gz
[2025-07-28 06:46:26] -rw-r--r-- 2 boinc boinc 145943331 Jul 28 05:35 ATLAS.root_0
[2025-07-28 06:46:26] -rw------- 1 boinc boinc 213815566 Jul 28 06:45 HITS.pool.root.1
[2025-07-28 06:46:26] -rw------- 1 boinc boinc    686080 Jul 28 06:46 result.tar.gz
06:46:27 (323107): run_atlas exited; CPU time 16088.182965
06:46:27 (323107): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN