Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:36:04 (334446): wrapper (7.7.26015): starting
05:36:04 (334446): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 05:36:04] Arguments: --nthreads 4
[2025-07-28 05:36:04] Threads: 4
[2025-07-28 05:36:04] Checking for CVMFS
[2025-07-28 05:36:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 05:36:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 05:36:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 05:36:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 05:36:04] 2.13.1.0 322385 0 30100 148843 3 19 3268548 4096001 188 130560 0 28914 99.955 2681 2985 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.174:3128 1
[2025-07-28 05:36:04] CVMFS is ok
[2025-07-28 05:36:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 05:36:04] Checking for apptainer binary...
[2025-07-28 05:36:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 05:36:04] Running /usr/bin/apptainer --version
[2025-07-28 05:36:04] apptainer version 1.4.1
[2025-07-28 05:36:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 05:36:04] X-32-ubuntu
[2025-07-28 05:36:04] apptainer works
[2025-07-28 05:36:04] Set ATHENA_PROC_NUMBER=4
[2025-07-28 05:36:04] Set ATHENA_CORE_NUMBER=4
[2025-07-28 05:36:04] Starting ATLAS job with PandaID=6747411413
[2025-07-28 05:36:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 06:45:45]  *** The last 200 lines of the pilot log: ***
[2025-07-28 06:45:45]  guid=d6757bb9-339f-4ed3-b795-21f2f031df60
[2025-07-28 06:45:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-28 06:45:45]  is_altstaged=None
[2025-07-28 06:45:45]  is_tar=False
[2025-07-28 06:45:45]  lfn=log.45743349._048650.job.log.tgz.1
[2025-07-28 06:45:45]  mtime=0
[2025-07-28 06:45:45]  protocol_id=None
[2025-07-28 06:45:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 06:45:45]  replicas=None
[2025-07-28 06:45:45]  scope=mc23_13p6TeV
[2025-07-28 06:45:45]  status=None
[2025-07-28 06:45:45]  status_code=0
[2025-07-28 06:45:45]  storage_token=
[2025-07-28 06:45:45]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6747411413/log.45743349._048650.job.log.tgz.1
[2025-07-28 06:45:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/8e/log.45743349._048650.job.log.tgz.1
[2025-07-28 06:45:45]  workdir=None
[2025-07-28 06:45:45] ]
[2025-07-28 06:45:45] 2025-07-28 10:45:08,450 | INFO     | transferring file log.45743349._048650.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6747411413/log.45743349._048650.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 06:45:45] 2025-07-28 10:45:08,450 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6747411413/log.45743349._048650.job.log.tgz.1 /var/lib/boinc/slots/2/log.45743349._048650.job
[2025-07-28 06:45:45] 2025-07-28 10:45:08,461 | INFO     | adding to output.list: log.45743349._048650.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/8e/log.45743349._048650.job.log.tg
[2025-07-28 06:45:45] 2025-07-28 10:45:08,461 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 06:45:45] 2025-07-28 10:45:08,461 | INFO     | summary of transferred files:
[2025-07-28 06:45:45] 2025-07-28 10:45:08,461 | INFO     |  -- lfn=log.45743349._048650.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 06:45:45] 2025-07-28 10:45:08,461 | INFO     | stage-out finished correctly
[2025-07-28 06:45:45] 2025-07-28 10:45:10,093 | INFO     | monitor loop #317: job 0:6747411413 is in state 'finished'
[2025-07-28 06:45:45] 2025-07-28 10:45:10,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:45:45] 2025-07-28 10:45:10,451 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 06:45:45] 2025-07-28 10:45:10,485 | INFO     | job 6747411413 has state=finished
[2025-07-28 06:45:45] 2025-07-28 10:45:10,485 | INFO     | preparing for final server update for job 6747411413 in state='finished'
[2025-07-28 06:45:45] 2025-07-28 10:45:10,485 | INFO     | this job has now completed (state=finished)
[2025-07-28 06:45:45] 2025-07-28 10:45:10,485 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 06:45:45] 2025-07-28 10:45:10,485 | INFO     | log transfer has been attempted: DONE
[2025-07-28 06:45:45] 2025-07-28 10:45:10,485 | INFO     | job 6747411413 has finished - writing final server update
[2025-07-28 06:45:45] 2025-07-28 10:45:10,485 | INFO     | total number of processed events: 400 (read)
[2025-07-28 06:45:45] 2025-07-28 10:45:10,486 | INFO     | executing command: lscpu
[2025-07-28 06:45:45] 2025-07-28 10:45:10,513 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 06:45:45] 2025-07-28 10:45:12,169 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 06:45:45] 2025-07-28 10:45:12,172 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3084.1525
[2025-07-28 06:45:45] 2025-07-28 10:45:12,175 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6747411413/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 06:45:45] 2025-07-28 10:45:12,175 | INFO     | extracted standard info from prmon json
[2025-07-28 06:45:45] 2025-07-28 10:45:12,175 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 06:45:45] 2025-07-28 10:45:12,175 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 06:45:45] 2025-07-28 10:45:12,176 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 06:45:45] 2025-07-28 10:45:12,176 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | fitting pss+swap vs Time
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | sum of square deviations: 70364110.0
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | sum of deviations: -3543295043.999999
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | mean x: 1753697523.0
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | mean y: 2401185.3114754097
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | -- intersect: 88312588607.86218
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | intersect: 88312588607.86218
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | chi2: 0.01476965457581708
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | -- intersect: 88312588607.86218
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | current memory leak: -50.36 B/s (using 61 data points, chi2=0.01)
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | could have reported an average CPU frequency of 3555 MHz (6 samples)
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | ..............................
[2025-07-28 06:45:45] 2025-07-28 10:45:12,177 | INFO     | . Timing measurements:
[2025-07-28 06:45:45] 2025-07-28 10:45:12,178 | INFO     | . get job = 0 s
[2025-07-28 06:45:45] 2025-07-28 10:45:12,178 | INFO     | . initial setup = 1 s
[2025-07-28 06:45:45] 2025-07-28 10:45:12,178 | INFO     | . payload setup = 2 s
[2025-07-28 06:45:45] 2025-07-28 10:45:12,178 | INFO     | . stage-in = 0 s
[2025-07-28 06:45:45] 2025-07-28 10:45:12,178 | INFO     | . payload execution = 4117 s
[2025-07-28 06:45:45] 2025-07-28 10:45:12,178 | INFO     | . stage-out = 0 s
[2025-07-28 06:45:45] 2025-07-28 10:45:12,178 | INFO     | . log creation = 0 s
[2025-07-28 06:45:45] 2025-07-28 10:45:12,178 | INFO     | ..............................
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | 
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | job summary report
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | --------------------------------------------------
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | PanDA job id: 6747411413
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | task id: 45743349
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | errors: (none)
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | pilot state: finished 
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | transexitcode: 0
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | exeerrorcode: 0
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | exeerrordiag: 
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | exitcode: 0
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | exitmsg: OK
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | cpuconsumptiontime: 16030 s
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | nevents: 400
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | neventsw: 0
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | pid: 367430
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | pgrp: 367430
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | corecount: 4
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | event service: False
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | sizes: {0: 2397424, 2: 2397686, 10: 2397714, 4124: 2423738, 4126: 2432736, 4128: 2432792, 4129: 2433114}
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | --------------------------------------------------
[2025-07-28 06:45:45] 2025-07-28 10:45:12,223 | INFO     | 
[2025-07-28 06:45:45] 2025-07-28 10:45:12,224 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-07-28 06:45:45] 2025-07-28 10:45:12,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | job 6747411413 has completed (purged errors)
[2025-07-28 06:45:45] 2025-07-28 10:45:12,236 | INFO     | overall cleanup function is called
[2025-07-28 06:45:45] 2025-07-28 10:45:13,243 | INFO     | --- collectZombieJob: --- 10, [367430]
[2025-07-28 06:45:45] 2025-07-28 10:45:13,243 | INFO     | zombie collector waiting for pid 367430
[2025-07-28 06:45:45] 2025-07-28 10:45:13,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 06:45:45] 2025-07-28 10:45:13,244 | INFO     | collected zombie processes
[2025-07-28 06:45:45] 2025-07-28 10:45:13,244 | INFO     | will attempt to kill all subprocesses of pid=367430
[2025-07-28 06:45:45] 2025-07-28 10:45:13,376 | INFO     | process IDs to be killed: [367430] (in reverse order)
[2025-07-28 06:45:45] 2025-07-28 10:45:13,407 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 06:45:45] 2025-07-28 10:45:13,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 06:45:45] 2025-07-28 10:45:13,410 | INFO     | did not find any defunct processes belonging to 367430
[2025-07-28 06:45:45] 2025-07-28 10:45:13,413 | INFO     | did not find any defunct processes belonging to 367430
[2025-07-28 06:45:45] 2025-07-28 10:45:13,413 | INFO     | ready for new job
[2025-07-28 06:45:45] 2025-07-28 10:45:13,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 06:45:45] 2025-07-28 10:45:13,414 | INFO     | ***************************************
[2025-07-28 06:45:45] 2025-07-28 10:45:13,414 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 06:45:45] 2025-07-28 10:45:13,414 | INFO     | ***************************************
[2025-07-28 06:45:45] 2025-07-28 10:45:13,414 | INFO     | 
[2025-07-28 06:45:45] 2025-07-28 10:45:13,415 | INFO     | architecture information:
[2025-07-28 06:45:45] 2025-07-28 10:45:13,415 | INFO     | executing command: cat /etc/os-release
[2025-07-28 06:45:45] 2025-07-28 10:45:13,424 | INFO     | cat /etc/os-release:
[2025-07-28 06:45:45] NAME="CentOS Linux"
[2025-07-28 06:45:45] VERSION="7 (Core)"
[2025-07-28 06:45:45] ID="centos"
[2025-07-28 06:45:45] ID_LIKE="rhel fedora"
[2025-07-28 06:45:45] VERSION_ID="7"
[2025-07-28 06:45:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 06:45:45] ANSI_COLOR="0;31"
[2025-07-28 06:45:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 06:45:45] HOME_URL="https://www.centos.org/"
[2025-07-28 06:45:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 06:45:45] 
[2025-07-28 06:45:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 06:45:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 06:45:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 06:45:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 06:45:45] 
[2025-07-28 06:45:45] 2025-07-28 10:45:13,425 | INFO     | ***************************************
[2025-07-28 06:45:45] 2025-07-28 10:45:13,927 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-07-28 06:45:45] 2025-07-28 10:45:13,939 | INFO     | sufficient remaining disk space (1822779506688 B)
[2025-07-28 06:45:45] 2025-07-28 10:45:13,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 06:45:45] 2025-07-28 10:45:13,940 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 06:45:45] 2025-07-28 10:45:13,940 | INFO     | update_server=False
[2025-07-28 06:45:45] 2025-07-28 10:45:13,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 06:45:45] 2025-07-28 10:45:13,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:45:45] 2025-07-28 10:45:13,940 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:45:45] 2025-07-28 10:45:13,940 | INFO     | aborting loop
[2025-07-28 06:45:45] 2025-07-28 10:45:13,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 06:45:45] 2025-07-28 10:45:14,484 | INFO     | all data control threads have been joined
[2025-07-28 06:45:45] 2025-07-28 10:45:14,714 | INFO     | all payload control threads have been joined
[2025-07-28 06:45:45] 2025-07-28 10:45:14,945 | INFO     | [job] retrieve thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:14,946 | INFO     | [job] queue monitor thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:14,946 | INFO     | [job] job monitor thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:15,351 | INFO     | all job control threads have been joined
[2025-07-28 06:45:45] 2025-07-28 10:45:15,472 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:15,489 | INFO     | [data] control thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:15,504 | INFO     | [job] validate thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:15,601 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:15,640 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:15,719 | INFO     | [payload] control thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:16,001 | INFO     | [data] copytool_out thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:16,022 | INFO     | [payload] validate_post thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:16,036 | INFO     | [data] copytool_in thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:16,356 | INFO     | [job] control thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:16,480 | INFO     | [payload] failed_post thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:16,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 06:45:45] 2025-07-28 10:45:20,496 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:24,203 | INFO     | job.realtimelogging is not enabled
[2025-07-28 06:45:45] 2025-07-28 10:45:25,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 06:45:45] 2025-07-28 10:45:26,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126877011883840)>', '<ExcThread(monitor, started 126876655793920)>']
[2025-07-28 06:45:45] 2025-07-28 10:45:31,872 | INFO     | all workflow threads have been joined
[2025-07-28 06:45:45] 2025-07-28 10:45:31,872 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 06:45:45] 2025-07-28 10:45:31,872 | INFO     | traces error code: 0
[2025-07-28 06:45:45] 2025-07-28 10:45:31,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 06:45:45] 2025-07-28 10:45:45,162 | INFO     | PID=339648 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 06:45:45] 2025-07-28 10:45:45,162 | INFO     | .. there are 2 such processes running
[2025-07-28 06:45:45] 2025-07-28 10:45:45,162 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 06:45:45] 2025-07-28 10:45:45,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 06:45:45] 2025-07-28 10:45:45,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 06:45:45] 2025-07-28 10:45:45,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 06:45:45] 2025-07-28 10:45:45,163 | INFO     | [monitor] control thread has ended
[2025-07-28 06:45:45] 2025-07-28 10:45:45,224 [wrapper] ==== pilot stdout END ====
[2025-07-28 06:45:45] 2025-07-28 10:45:45,227 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 06:45:45] 2025-07-28 10:45:45,229 [wrapper] pilotpid: 339648
[2025-07-28 06:45:45] 2025-07-28 10:45:45,232 [wrapper] Pilot exit status: 0
[2025-07-28 06:45:45] 2025-07-28 10:45:45,239 [wrapper] pandaids: 6747411413
[2025-07-28 06:45:45] 2025-07-28 10:45:45,266 [wrapper] cleanup supervisor_pilot  383577 339650
[2025-07-28 06:45:45] 2025-07-28 10:45:45,268 [wrapper] Test setup, not cleaning
[2025-07-28 06:45:45] 2025-07-28 10:45:45,270 [wrapper] apfmon messages muted
[2025-07-28 06:45:45] 2025-07-28 10:45:45,272 [wrapper] ==== wrapper stdout END ====
[2025-07-28 06:45:45] 2025-07-28 10:45:45,274 [wrapper] ==== wrapper stderr END ====
[2025-07-28 06:45:45]  *** Error codes and diagnostics ***
[2025-07-28 06:45:45]     "exeErrorCode": 0,
[2025-07-28 06:45:45]     "exeErrorDiag": "",
[2025-07-28 06:45:45]     "pilotErrorCode": 0,
[2025-07-28 06:45:45]     "pilotErrorDiag": "",
[2025-07-28 06:45:45]  *** Listing of results directory ***
[2025-07-28 06:45:45] total 435260
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc    530466 Jul 27 08:48 pilot3.tar.gz
[2025-07-28 06:45:45] -rwx------ 1 boinc boinc     36292 Jul 27 08:59 runpilot2-wrapper.sh
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc      5112 Jul 27 08:59 queuedata.json
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc       100 Jul 28 05:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 06:45:45] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 05:36 run_atlas
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc       105 Jul 28 05:36 job.xml
[2025-07-28 06:45:45] -rw-r--r-- 2 boinc boinc     15095 Jul 28 05:36 start_atlas.sh
[2025-07-28 06:45:45] drwxrwx--x 2 boinc boinc      4096 Jul 28 05:36 shared
[2025-07-28 06:45:45] -rw-r--r-- 2 boinc boinc    542897 Jul 28 05:36 input.tar.gz
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc      9728 Jul 28 05:36 init_data.xml
[2025-07-28 06:45:45] -rw-r--r-- 2 boinc boinc 230099236 Jul 28 05:36 EVNT.45743347._002697.pool.root.1
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc         0 Jul 28 05:36 boinc_setup_complete
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc         0 Jul 28 05:36 boinc_lockfile
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc      2562 Jul 28 05:36 pandaJob.out
[2025-07-28 06:45:45] -rw------- 1 boinc boinc    978460 Jul 28 05:36 agis_schedconf.cvmfs.json
[2025-07-28 06:45:45] -rw------- 1 boinc boinc   1593052 Jul 28 05:36 agis_ddmendpoints.agis.ALL.json
[2025-07-28 06:45:45] drwx------ 4 boinc boinc      4096 Jul 28 05:36 pilot3
[2025-07-28 06:45:45] -rw------- 1 boinc boinc 210417612 Jul 28 06:44 HITS.45743349._048650.pool.root.1
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc       529 Jul 28 06:45 boinc_task_state.xml
[2025-07-28 06:45:45] -rw------- 1 boinc boinc      1013 Jul 28 06:45 memory_monitor_summary.json
[2025-07-28 06:45:45] -rw------- 1 boinc boinc    233204 Jul 28 06:45 log.45743349._048650.job.log.tgz.1
[2025-07-28 06:45:45] -rw------- 1 boinc boinc      7731 Jul 28 06:45 heartbeat.json
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc        27 Jul 28 06:45 wrapper_checkpoint.txt
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc      8192 Jul 28 06:45 boinc_mmap_file
[2025-07-28 06:45:45] -rw------- 1 boinc boinc       821 Jul 28 06:45 pilotlog.txt
[2025-07-28 06:45:45] -rw------- 1 boinc boinc        95 Jul 28 06:45 pilot_heartbeat.json
[2025-07-28 06:45:45] -rw------- 1 boinc boinc    422741 Jul 28 06:45 log.45743349._048650.job.log.1
[2025-07-28 06:45:45] -rw------- 1 boinc boinc       357 Jul 28 06:45 output.list
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc       620 Jul 28 06:45 runtime_log
[2025-07-28 06:45:45] -rw------- 1 boinc boinc    675840 Jul 28 06:45 result.tar.gz
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc      8628 Jul 28 06:45 runtime_log.err
[2025-07-28 06:45:45] -rw------- 1 boinc boinc       641 Jul 28 06:45 7TwNDmn9F07n9Rq4apOajLDm4fhM0noT9bVof3QYDmLZ2KDmX4A0rn.diag
[2025-07-28 06:45:45] -rw-r--r-- 1 boinc boinc     21004 Jul 28 06:45 stderr.txt
[2025-07-28 06:45:45] HITS file was successfully produced:
[2025-07-28 06:45:45] -rw------- 1 boinc boinc 210417612 Jul 28 06:44 shared/HITS.pool.root.1
[2025-07-28 06:45:45]  *** Contents of shared directory: ***
[2025-07-28 06:45:45] total 431412
[2025-07-28 06:45:45] -rw-r--r-- 2 boinc boinc     15095 Jul 28 05:36 start_atlas.sh
[2025-07-28 06:45:45] -rw-r--r-- 2 boinc boinc    542897 Jul 28 05:36 input.tar.gz
[2025-07-28 06:45:45] -rw-r--r-- 2 boinc boinc 230099236 Jul 28 05:36 ATLAS.root_0
[2025-07-28 06:45:45] -rw------- 1 boinc boinc 210417612 Jul 28 06:44 HITS.pool.root.1
[2025-07-28 06:45:45] -rw------- 1 boinc boinc    675840 Jul 28 06:45 result.tar.gz
06:45:47 (334446): run_atlas exited; CPU time 16055.598469
06:45:47 (334446): called boinc_finish(0)

</stderr_txt>
]]>

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