Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:19:11 (19650): wrapper (7.7.26015): starting
05:19:11 (19650): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 05:19:11] Arguments: --nthreads 8
[2025-07-28 05:19:11] Threads: 8
[2025-07-28 05:19:11] Checking for CVMFS
[2025-07-28 05:19:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 05:19:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 05:19:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 05:19:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 05:19:12] 2.11.2.0 2934 2395 73268 148843 2 1 13754472 20275201 1 130560 0 1479038 99.990 76467 36816 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 05:19:12] CVMFS is ok
[2025-07-28 05:19:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 05:19:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 05:19:12] Further information can be found at the LHC@home message board.
[2025-07-28 05:19:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 05:19:12] Checking for apptainer binary...
[2025-07-28 05:19:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 05:19:12] Running /usr/bin/apptainer --version
[2025-07-28 05:19:12] apptainer version 1.3.2-1.el7
[2025-07-28 05:19:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 05:19:14] c-204-33.aglt2.org
[2025-07-28 05:19:14] apptainer works
[2025-07-28 05:19:14] Set ATHENA_PROC_NUMBER=8
[2025-07-28 05:19:14] Set ATHENA_CORE_NUMBER=8
[2025-07-28 05:19:14] Starting ATLAS job with PandaID=6745058672
[2025-07-28 05:19:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 07:45:10]  *** The last 200 lines of the pilot log: ***
[2025-07-28 07:45:10] 2025-07-28 11:44:38,038 | INFO     | intersect: 37935610866.3074
[2025-07-28 07:45:10] 2025-07-28 11:44:38,038 | INFO     | chi2: 2.632813405402941
[2025-07-28 07:45:10] 2025-07-28 11:44:38,039 | INFO     | sum of square deviations: 814875912.4927523
[2025-07-28 07:45:10] 2025-07-28 11:44:38,040 | INFO     | sum of deviations: -7708826516.246382
[2025-07-28 07:45:10] 2025-07-28 11:44:38,040 | INFO     | mean x: 1753698582.5072465
[2025-07-28 07:45:10] 2025-07-28 11:44:38,040 | INFO     | mean y: 2577771.7463768115
[2025-07-28 07:45:10] 2025-07-28 11:44:38,040 | INFO     | -- intersect: 16592782399.320019
[2025-07-28 07:45:10] 2025-07-28 11:44:38,040 | INFO     | intersect: 16592782399.320019
[2025-07-28 07:45:10] 2025-07-28 11:44:38,041 | INFO     | chi2: 1.645685419570417
[2025-07-28 07:45:10] 2025-07-28 11:44:38,041 | INFO     | current chi2=1.645685419570417 (change=37.4932755890252 %)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,041 | INFO     | sum of square deviations: 729469964.9924784
[2025-07-28 07:45:10] 2025-07-28 11:44:38,042 | INFO     | sum of deviations: -6772346337.796995
[2025-07-28 07:45:10] 2025-07-28 11:44:38,042 | INFO     | mean x: 1753698430.0075188
[2025-07-28 07:45:10] 2025-07-28 11:44:38,042 | INFO     | mean y: 2579444.796992481
[2025-07-28 07:45:10] 2025-07-28 11:44:38,042 | INFO     | -- intersect: 16283788692.643435
[2025-07-28 07:45:10] 2025-07-28 11:44:38,042 | INFO     | intersect: 16283788692.643435
[2025-07-28 07:45:10] 2025-07-28 11:44:38,043 | INFO     | chi2: 1.646190076314249
[2025-07-28 07:45:10] 2025-07-28 11:44:38,043 | INFO     | current chi2=1.646190076314249 (change=-0.030665444187004908 %)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,043 | INFO     | right removable region: 132
[2025-07-28 07:45:10] 2025-07-28 11:44:38,043 | INFO     | sufficient remaining disk space (18737004544 B)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,044 | INFO     | sum of square deviations: 814875302.4927523
[2025-07-28 07:45:10] 2025-07-28 11:44:38,044 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,045 | INFO     | sum of deviations: -41481704904.956505
[2025-07-28 07:45:10] 2025-07-28 11:44:38,045 | INFO     | mean x: 1753698887.5072465
[2025-07-28 07:45:10] 2025-07-28 11:44:38,046 | INFO     | mean y: 2594246.4565217393
[2025-07-28 07:45:10] 2025-07-28 11:44:38,046 | INFO     | -- intersect: 89275664029.26926
[2025-07-28 07:45:10] 2025-07-28 11:44:38,046 | INFO     | intersect: 89275664029.26926
[2025-07-28 07:45:10] 2025-07-28 11:44:38,046 | INFO     | chi2: 1.171659302445903
[2025-07-28 07:45:10] 2025-07-28 11:44:38,046 | INFO     | current chi2=1.171659302445903 (change=55.49782221400588 %)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,047 | INFO     | sum of square deviations: 729468744.9924784
[2025-07-28 07:45:10] 2025-07-28 11:44:38,047 | INFO     | sum of deviations: -39896907208.50376
[2025-07-28 07:45:10] 2025-07-28 11:44:38,048 | INFO     | mean x: 1753699040.0075188
[2025-07-28 07:45:10] 2025-07-28 11:44:38,048 | INFO     | mean y: 2591342.5037593986
[2025-07-28 07:45:10] 2025-07-28 11:44:38,048 | INFO     | -- intersect: 95917828768.53432
[2025-07-28 07:45:10] 2025-07-28 11:44:38,048 | INFO     | intersect: 95917828768.53432
[2025-07-28 07:45:10] 2025-07-28 11:44:38,049 | INFO     | chi2: 1.1585029894619974
[2025-07-28 07:45:10] 2025-07-28 11:44:38,049 | INFO     | current chi2=1.1585029894619974 (change=1.1228787204984505 %)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,049 | INFO     | left removable region: 20
[2025-07-28 07:45:10] 2025-07-28 11:44:38,050 | INFO     | sum of square deviations: 435606551.99107105
[2025-07-28 07:45:10] 2025-07-28 11:44:38,050 | INFO     | sum of deviations: -20116044293.38393
[2025-07-28 07:45:10] 2025-07-28 11:44:38,050 | INFO     | mean x: 1753699009.5089285
[2025-07-28 07:45:10] 2025-07-28 11:44:38,051 | INFO     | mean y: 2602521.8839285714
[2025-07-28 07:45:10] 2025-07-28 11:44:38,051 | INFO     | -- intersect: 80987350779.91344
[2025-07-28 07:45:10] 2025-07-28 11:44:38,051 | INFO     | intersect: 80987350779.91344
[2025-07-28 07:45:10] 2025-07-28 11:44:38,051 | INFO     | chi2: 0.11186712769642754
[2025-07-28 07:45:10] 2025-07-28 11:44:38,052 | INFO     | -- intersect: 80987350779.91344
[2025-07-28 07:45:10] 2025-07-28 11:44:38,052 | INFO     | current memory leak: -46.18 B/s (using 112 data points, chi2=0.11)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,052 | INFO     | could have reported an average CPU frequency of 2014 MHz (8 samples)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,053 | INFO     | ..............................
[2025-07-28 07:45:10] 2025-07-28 11:44:38,053 | INFO     | . Timing measurements:
[2025-07-28 07:45:10] 2025-07-28 11:44:38,053 | INFO     | . get job = 0 s
[2025-07-28 07:45:10] 2025-07-28 11:44:38,053 | INFO     | . initial setup = 2 s
[2025-07-28 07:45:10] 2025-07-28 11:44:38,053 | INFO     | . payload setup = 11 s
[2025-07-28 07:45:10] 2025-07-28 11:44:38,054 | INFO     | . stage-in = 0 s
[2025-07-28 07:45:10] 2025-07-28 11:44:38,054 | INFO     | . payload execution = 8667 s
[2025-07-28 07:45:10] 2025-07-28 11:44:38,054 | INFO     | . stage-out = 0 s
[2025-07-28 07:45:10] 2025-07-28 11:44:38,054 | INFO     | . log creation = 0 s
[2025-07-28 07:45:10] 2025-07-28 11:44:38,054 | INFO     | ..............................
[2025-07-28 07:45:10] 2025-07-28 11:44:38,146 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6745058672: 3624926 B (within 2537553920 B limit)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,152 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6745058672/HITS.45743349._024095.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,154 | INFO     | total size of present files: 0 B (workdir size: 3624926 B)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,154 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6745058672/HITS.45743349._024095.pool.root.1 since it does not exist
[2025-07-28 07:45:10] 2025-07-28 11:44:38,155 | INFO     | 
[2025-07-28 07:45:10] 2025-07-28 11:44:38,155 | INFO     | job summary report
[2025-07-28 07:45:10] 2025-07-28 11:44:38,155 | INFO     | --------------------------------------------------
[2025-07-28 07:45:10] 2025-07-28 11:44:38,155 | INFO     | PanDA job id: 6745058672
[2025-07-28 07:45:10] 2025-07-28 11:44:38,156 | INFO     | task id: 45743349
[2025-07-28 07:45:10] 2025-07-28 11:44:38,156 | INFO     | errors: (none)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 07:45:10] 2025-07-28 11:44:38,156 | INFO     | pilot state: finished 
[2025-07-28 07:45:10] 2025-07-28 11:44:38,156 | INFO     | transexitcode: 0
[2025-07-28 07:45:10] 2025-07-28 11:44:38,157 | INFO     | exeerrorcode: 0
[2025-07-28 07:45:10] 2025-07-28 11:44:38,157 | INFO     | exeerrordiag: 
[2025-07-28 07:45:10] 2025-07-28 11:44:38,157 | INFO     | exitcode: 0
[2025-07-28 07:45:10] 2025-07-28 11:44:38,157 | INFO     | exitmsg: OK
[2025-07-28 07:45:10] 2025-07-28 11:44:38,157 | INFO     | cpuconsumptiontime: 62768 s
[2025-07-28 07:45:10] 2025-07-28 11:44:38,158 | INFO     | nevents: 400
[2025-07-28 07:45:10] 2025-07-28 11:44:38,158 | INFO     | neventsw: 0
[2025-07-28 07:45:10] 2025-07-28 11:44:38,158 | INFO     | pid: 30854
[2025-07-28 07:45:10] 2025-07-28 11:44:38,158 | INFO     | pgrp: 30854
[2025-07-28 07:45:10] 2025-07-28 11:44:38,158 | INFO     | corecount: 8
[2025-07-28 07:45:10] 2025-07-28 11:44:38,159 | INFO     | event service: False
[2025-07-28 07:45:10] 2025-07-28 11:44:38,159 | INFO     | sizes: {0: 2397472, 1: 2397472, 6: 2397762, 11: 2397790, 8683: 2425700, 8684: 2434698, 8685: 2434882, 8691: 2435076}
[2025-07-28 07:45:10] 2025-07-28 11:44:38,159 | INFO     | --------------------------------------------------
[2025-07-28 07:45:10] 2025-07-28 11:44:38,159 | INFO     | 
[2025-07-28 07:45:10] 2025-07-28 11:44:38,160 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 07:45:10] 2025-07-28 11:44:38,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,190 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 07:45:10] 2025-07-28 11:44:38,190 | INFO     | job 6745058672 has completed (purged errors)
[2025-07-28 07:45:10] 2025-07-28 11:44:38,190 | INFO     | overall cleanup function is called
[2025-07-28 07:45:10] 2025-07-28 11:44:38,261 | INFO     | number of running child processes to parent process 30854: 1
[2025-07-28 07:45:10] 2025-07-28 11:44:38,262 | INFO     | maximum number of monitored processes: 6
[2025-07-28 07:45:10] 2025-07-28 11:44:38,262 | INFO     | aborting job monitoring since job object (job id=6745058672) has expired
[2025-07-28 07:45:10] 2025-07-28 11:44:39,200 | INFO     | --- collectZombieJob: --- 10, [30854]
[2025-07-28 07:45:10] 2025-07-28 11:44:39,200 | INFO     | zombie collector waiting for pid 30854
[2025-07-28 07:45:10] 2025-07-28 11:44:39,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 07:45:10] 2025-07-28 11:44:39,200 | INFO     | collected zombie processes
[2025-07-28 07:45:10] 2025-07-28 11:44:39,200 | INFO     | will attempt to kill all subprocesses of pid=30854
[2025-07-28 07:45:10] 2025-07-28 11:44:39,284 | INFO     | process IDs to be killed: [30854] (in reverse order)
[2025-07-28 07:45:10] 2025-07-28 11:44:39,339 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 07:45:10] 2025-07-28 11:44:39,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 07:45:10] 2025-07-28 11:44:39,344 | INFO     | did not find any defunct processes belonging to 30854
[2025-07-28 07:45:10] 2025-07-28 11:44:39,347 | INFO     | did not find any defunct processes belonging to 30854
[2025-07-28 07:45:10] 2025-07-28 11:44:39,347 | INFO     | ready for new job
[2025-07-28 07:45:10] 2025-07-28 11:44:39,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 07:45:10] 2025-07-28 11:44:39,349 | INFO     | ***************************************
[2025-07-28 07:45:10] 2025-07-28 11:44:39,349 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 07:45:10] 2025-07-28 11:44:39,349 | INFO     | ***************************************
[2025-07-28 07:45:10] 2025-07-28 11:44:39,349 | INFO     | 
[2025-07-28 07:45:10] 2025-07-28 11:44:39,350 | INFO     | architecture information:
[2025-07-28 07:45:10] 2025-07-28 11:44:39,351 | INFO     | executing command: cat /etc/os-release
[2025-07-28 07:45:10] 2025-07-28 11:44:39,369 | INFO     | cat /etc/os-release:
[2025-07-28 07:45:10] NAME="CentOS Linux"
[2025-07-28 07:45:10] VERSION="7 (Core)"
[2025-07-28 07:45:10] ID="centos"
[2025-07-28 07:45:10] ID_LIKE="rhel fedora"
[2025-07-28 07:45:10] VERSION_ID="7"
[2025-07-28 07:45:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 07:45:10] ANSI_COLOR="0;31"
[2025-07-28 07:45:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 07:45:10] HOME_URL="https://www.centos.org/"
[2025-07-28 07:45:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 07:45:10] 
[2025-07-28 07:45:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 07:45:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 07:45:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 07:45:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 07:45:10] 
[2025-07-28 07:45:10] 2025-07-28 11:44:39,370 | INFO     | ***************************************
[2025-07-28 07:45:10] 2025-07-28 11:44:39,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 07:45:10] 2025-07-28 11:44:39,893 | INFO     | sufficient remaining disk space (18741198848 B)
[2025-07-28 07:45:10] 2025-07-28 11:44:39,893 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 07:45:10] 2025-07-28 11:44:39,894 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 07:45:10] 2025-07-28 11:44:39,894 | INFO     | update_server=False
[2025-07-28 07:45:10] 2025-07-28 11:44:39,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 07:45:10] 2025-07-28 11:44:39,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 07:45:10] 2025-07-28 11:44:39,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 07:45:10] 2025-07-28 11:44:39,895 | INFO     | aborting loop
[2025-07-28 07:45:10] 2025-07-28 11:44:40,855 | INFO     | all job control threads have been joined
[2025-07-28 07:45:10] 2025-07-28 11:44:40,889 | INFO     | all data control threads have been joined
[2025-07-28 07:45:10] 2025-07-28 11:44:40,900 | INFO     | [job] retrieve thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:40,901 | INFO     | [job] queue monitor thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:40,901 | INFO     | [job] job monitor thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:40,905 | INFO     | [payload] failed_post thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:40,963 | INFO     | [data] copytool_in thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:40,999 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:41,021 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:41,117 | INFO     | [job] validate thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:41,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 07:45:10] 2025-07-28 11:44:41,233 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:41,244 | INFO     | all payload control threads have been joined
[2025-07-28 07:45:10] 2025-07-28 11:44:41,828 | INFO     | [payload] validate_post thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:41,861 | INFO     | [job] control thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:41,895 | INFO     | [data] control thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:42,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 07:45:10] 2025-07-28 11:44:42,250 | INFO     | [payload] control thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:43,147 | INFO     | [data] copytool_out thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:46,144 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:50,483 | INFO     | job.realtimelogging is not enabled
[2025-07-28 07:45:10] 2025-07-28 11:44:51,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 07:45:10] 2025-07-28 11:44:52,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894681081664)>', '<ExcThread(monitor, started 139894080902912)>']
[2025-07-28 07:45:10] 2025-07-28 11:44:57,129 | INFO     | all workflow threads have been joined
[2025-07-28 07:45:10] 2025-07-28 11:44:57,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 07:45:10] 2025-07-28 11:44:57,134 | INFO     | traces error code: 0
[2025-07-28 07:45:10] 2025-07-28 11:44:57,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 07:45:10] 2025-07-28 11:45:09,721 | INFO     | PID=23380 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 07:45:10] 2025-07-28 11:45:09,721 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 07:45:10] 2025-07-28 11:45:09,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 07:45:10] 2025-07-28 11:45:09,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 07:45:10] 2025-07-28 11:45:09,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 07:45:10] 2025-07-28 11:45:09,722 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 07:45:10] 2025-07-28 11:45:09,722 | INFO     | [monitor] control thread has ended
[2025-07-28 07:45:10] 2025-07-28 11:45:09,818 [wrapper] ==== pilot stdout END ====
[2025-07-28 07:45:10] 2025-07-28 11:45:09,823 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 07:45:10] 2025-07-28 11:45:09,828 [wrapper] pilotpid: 23380
[2025-07-28 07:45:10] 2025-07-28 11:45:09,833 [wrapper] Pilot exit status: 0
[2025-07-28 07:45:10] 2025-07-28 11:45:09,851 [wrapper] pandaids: 6745058672
[2025-07-28 07:45:10] 2025-07-28 11:45:09,893 [wrapper] cleanup supervisor_pilot 17389 23381
[2025-07-28 07:45:10] 2025-07-28 11:45:09,898 [wrapper] Test setup, not cleaning
[2025-07-28 07:45:10] 2025-07-28 11:45:09,902 [wrapper] apfmon messages muted
[2025-07-28 07:45:10] 2025-07-28 11:45:09,907 [wrapper] ==== wrapper stdout END ====
[2025-07-28 07:45:10] 2025-07-28 11:45:09,911 [wrapper] ==== wrapper stderr END ====
[2025-07-28 07:45:10]  *** Error codes and diagnostics ***
[2025-07-28 07:45:10]     "exeErrorCode": 0,
[2025-07-28 07:45:10]     "exeErrorDiag": "",
[2025-07-28 07:45:10]     "pilotErrorCode": 0,
[2025-07-28 07:45:10]     "pilotErrorDiag": "",
[2025-07-28 07:45:10]  *** Listing of results directory ***
[2025-07-28 07:45:10] total 353068
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 12:23 pilot3.tar.gz
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 12:52 queuedata.json
[2025-07-28 07:45:10] -rwx------ 1 boincer umatlas     36292 Jul 25 12:54 runpilot2-wrapper.sh
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas       100 Jul 28 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 07:45:10] -rwxr-xr-x 1 boincer umatlas      7986 Jul 28 05:19 run_atlas
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas       105 Jul 28 05:19 job.xml
[2025-07-28 07:45:10] -rw-r--r-- 2 boincer umatlas 144567935 Jul 28 05:19 EVNT.45743347._001366.pool.root.1
[2025-07-28 07:45:10] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 05:19 start_atlas.sh
[2025-07-28 07:45:10] drwxrwx--x 2 boincer umatlas      4096 Jul 28 05:19 shared
[2025-07-28 07:45:10] -rw-r--r-- 2 boincer umatlas    542891 Jul 28 05:19 input.tar.gz
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas         0 Jul 28 05:19 boinc_lockfile
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas      2561 Jul 28 05:19 pandaJob.out
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas    978460 Jul 28 05:19 agis_schedconf.cvmfs.json
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas   1593052 Jul 28 05:19 agis_ddmendpoints.agis.ALL.json
[2025-07-28 07:45:10] drwx------ 4 boincer umatlas      4096 Jul 28 05:19 pilot3
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas      5824 Jul 28 07:40 init_data.xml
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas 210831942 Jul 28 07:43 HITS.45743349._024095.pool.root.1
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas       529 Jul 28 07:44 boinc_task_state.xml
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas      1055 Jul 28 07:44 memory_monitor_summary.json
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas    343764 Jul 28 07:44 log.45743349._024095.job.log.tgz.1
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas        95 Jul 28 07:44 pilot_heartbeat.json
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas      7853 Jul 28 07:44 heartbeat.json
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas      8192 Jul 28 07:44 boinc_mmap_file
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas        27 Jul 28 07:44 wrapper_checkpoint.txt
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas       815 Jul 28 07:45 pilotlog.txt
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas    789252 Jul 28 07:45 log.45743349._024095.job.log.1
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas       357 Jul 28 07:45 output.list
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas       620 Jul 28 07:45 runtime_log
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas   1157120 Jul 28 07:45 result.tar.gz
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas      8660 Jul 28 07:45 runtime_log.err
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas       661 Jul 28 07:45 qLoNDmIsaz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr0PLDma8OxXn.diag
[2025-07-28 07:45:10] -rw-r--r-- 1 boincer umatlas     21375 Jul 28 07:45 stderr.txt
[2025-07-28 07:45:10] HITS file was successfully produced:
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas 210831942 Jul 28 07:43 shared/HITS.pool.root.1
[2025-07-28 07:45:10]  *** Contents of shared directory: ***
[2025-07-28 07:45:10] total 348760
[2025-07-28 07:45:10] -rw-r--r-- 2 boincer umatlas 144567935 Jul 28 05:19 ATLAS.root_0
[2025-07-28 07:45:10] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 05:19 start_atlas.sh
[2025-07-28 07:45:10] -rw-r--r-- 2 boincer umatlas    542891 Jul 28 05:19 input.tar.gz
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas 210831942 Jul 28 07:43 HITS.pool.root.1
[2025-07-28 07:45:10] -rw------- 1 boincer umatlas   1157120 Jul 28 07:45 result.tar.gz
07:45:11 (19650): run_atlas exited; CPU time 62771.061203
07:45:11 (19650): called boinc_finish(0)

</stderr_txt>
]]>

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