Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:45 (2016610): wrapper (7.7.26015): starting
05:14:45 (2016610): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 05:14:45] Arguments: --nthreads 12
[2025-07-28 05:14:45] Threads: 12
[2025-07-28 05:14:45] Checking for CVMFS
[2025-07-28 05:14:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 05:14:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 05:14:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 05:14:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 05:14:46] 2.13.0.0 1889558 19611 332132 148841 1 646 29691614 40960001 10479 16776704 1 54302238 99.812 44480488 29211 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 05:14:46] CVMFS is ok
[2025-07-28 05:14:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 05:14:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 05:14:46] Further information can be found at the LHC@home message board.
[2025-07-28 05:14:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 05:14:46] Checking for apptainer binary...
[2025-07-28 05:14:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 05:14:46] Running /usr/bin/apptainer --version
[2025-07-28 05:14:46] apptainer version 1.4.1-1.el9
[2025-07-28 05:14:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 05:14:46] c6-5-7-1.aglt2.org
[2025-07-28 05:14:46] apptainer works
[2025-07-28 05:14:46] Set ATHENA_PROC_NUMBER=12
[2025-07-28 05:14:46] Set ATHENA_CORE_NUMBER=12
[2025-07-28 05:14:46] Starting ATLAS job with PandaID=6745185779
[2025-07-28 05:14:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 06:53:47]  *** The last 200 lines of the pilot log: ***
[2025-07-28 06:53:47]  filetype=log
[2025-07-28 06:53:47]  guid=e1f30b7c-04ef-4747-825c-46860242afaa
[2025-07-28 06:53:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-28 06:53:47]  is_altstaged=None
[2025-07-28 06:53:47]  is_tar=False
[2025-07-28 06:53:47]  lfn=log.45743349._037724.job.log.tgz.1
[2025-07-28 06:53:47]  mtime=0
[2025-07-28 06:53:47]  protocol_id=None
[2025-07-28 06:53:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 06:53:47]  replicas=None
[2025-07-28 06:53:47]  scope=mc23_13p6TeV
[2025-07-28 06:53:47]  status=None
[2025-07-28 06:53:47]  status_code=0
[2025-07-28 06:53:47]  storage_token=
[2025-07-28 06:53:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745185779/log.45743349._037724.job.log.tgz.1
[2025-07-28 06:53:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/f2/log.45743349._037724.job.log.tgz.1
[2025-07-28 06:53:47]  workdir=None
[2025-07-28 06:53:47] ]
[2025-07-28 06:53:47] 2025-07-28 10:53:10,502 | INFO     | transferring file log.45743349._037724.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745185779/log.45743349._037724.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 06:53:47] 2025-07-28 10:53:10,502 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745185779/log.45743349._037724.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._037724.job
[2025-07-28 06:53:47] 2025-07-28 10:53:10,519 | INFO     | adding to output.list: log.45743349._037724.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/f2/log.45743349._037724.job.log.tg
[2025-07-28 06:53:47] 2025-07-28 10:53:10,520 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 06:53:47] 2025-07-28 10:53:10,520 | INFO     | summary of transferred files:
[2025-07-28 06:53:47] 2025-07-28 10:53:10,520 | INFO     |  -- lfn=log.45743349._037724.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 06:53:47] 2025-07-28 10:53:10,520 | INFO     | stage-out finished correctly
[2025-07-28 06:53:47] 2025-07-28 10:53:10,601 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 06:53:47] 2025-07-28 10:53:10,683 | INFO     | job 6745185779 has state=finished
[2025-07-28 06:53:47] 2025-07-28 10:53:10,683 | INFO     | preparing for final server update for job 6745185779 in state='finished'
[2025-07-28 06:53:47] 2025-07-28 10:53:10,684 | INFO     | this job has now completed (state=finished)
[2025-07-28 06:53:47] 2025-07-28 10:53:10,684 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 06:53:47] 2025-07-28 10:53:10,684 | INFO     | log transfer has been attempted: DONE
[2025-07-28 06:53:47] 2025-07-28 10:53:10,684 | INFO     | job 6745185779 has finished - writing final server update
[2025-07-28 06:53:47] 2025-07-28 10:53:10,684 | INFO     | total number of processed events: 400 (read)
[2025-07-28 06:53:47] 2025-07-28 10:53:10,685 | INFO     | executing command: lscpu
[2025-07-28 06:53:47] 2025-07-28 10:53:10,741 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 06:53:47] 2025-07-28 10:53:12,239 | INFO     | monitor loop #385: job 0:6745185779 is in state 'finished'
[2025-07-28 06:53:47] 2025-07-28 10:53:12,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:53:47] 2025-07-28 10:53:14,495 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 06:53:47] 2025-07-28 10:53:14,502 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2780.8309464285717
[2025-07-28 06:53:47] 2025-07-28 10:53:14,511 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745185779/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 06:53:47] 2025-07-28 10:53:14,512 | INFO     | extracted standard info from prmon json
[2025-07-28 06:53:47] 2025-07-28 10:53:14,512 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 06:53:47] 2025-07-28 10:53:14,512 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 06:53:47] 2025-07-28 10:53:14,512 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 06:53:47] 2025-07-28 10:53:14,512 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 06:53:47] 2025-07-28 10:53:14,514 | INFO     | fitting pss+swap vs Time
[2025-07-28 06:53:47] 2025-07-28 10:53:14,514 | INFO     | sum of square deviations: 218585456.08988798
[2025-07-28 06:53:47] 2025-07-28 10:53:14,515 | INFO     | sum of deviations: -6834497855.0786495
[2025-07-28 06:53:47] 2025-07-28 10:53:14,515 | INFO     | mean x: 1753697123.1011236
[2025-07-28 06:53:47] 2025-07-28 10:53:14,515 | INFO     | mean y: 2445613.786516854
[2025-07-28 06:53:47] 2025-07-28 10:53:14,515 | INFO     | -- intersect: 54835184445.97773
[2025-07-28 06:53:47] 2025-07-28 10:53:14,515 | INFO     | intersect: 54835184445.97773
[2025-07-28 06:53:47] 2025-07-28 10:53:14,516 | INFO     | chi2: 0.04336370022605178
[2025-07-28 06:53:47] 2025-07-28 10:53:14,516 | INFO     | -- intersect: 54835184445.97773
[2025-07-28 06:53:47] 2025-07-28 10:53:14,516 | INFO     | current memory leak: -31.27 B/s (using 89 data points, chi2=0.04)
[2025-07-28 06:53:47] 2025-07-28 10:53:14,516 | INFO     | could have reported an average CPU frequency of 2721 MHz (7 samples)
[2025-07-28 06:53:47] 2025-07-28 10:53:14,516 | INFO     | ..............................
[2025-07-28 06:53:47] 2025-07-28 10:53:14,516 | INFO     | . Timing measurements:
[2025-07-28 06:53:47] 2025-07-28 10:53:14,516 | INFO     | . get job = 0 s
[2025-07-28 06:53:47] 2025-07-28 10:53:14,516 | INFO     | . initial setup = 3 s
[2025-07-28 06:53:47] 2025-07-28 10:53:14,517 | INFO     | . payload setup = 9 s
[2025-07-28 06:53:47] 2025-07-28 10:53:14,517 | INFO     | . stage-in = 0 s
[2025-07-28 06:53:47] 2025-07-28 10:53:14,517 | INFO     | . payload execution = 5859 s
[2025-07-28 06:53:47] 2025-07-28 10:53:14,517 | INFO     | . stage-out = 0 s
[2025-07-28 06:53:47] 2025-07-28 10:53:14,517 | INFO     | . log creation = 0 s
[2025-07-28 06:53:47] 2025-07-28 10:53:14,517 | INFO     | ..............................
[2025-07-28 06:53:47] 2025-07-28 10:53:14,610 | INFO     | 
[2025-07-28 06:53:47] 2025-07-28 10:53:14,610 | INFO     | job summary report
[2025-07-28 06:53:47] 2025-07-28 10:53:14,610 | INFO     | --------------------------------------------------
[2025-07-28 06:53:47] 2025-07-28 10:53:14,610 | INFO     | PanDA job id: 6745185779
[2025-07-28 06:53:47] 2025-07-28 10:53:14,610 | INFO     | task id: 45743349
[2025-07-28 06:53:47] 2025-07-28 10:53:14,610 | INFO     | errors: (none)
[2025-07-28 06:53:47] 2025-07-28 10:53:14,610 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 06:53:47] 2025-07-28 10:53:14,610 | INFO     | pilot state: finished 
[2025-07-28 06:53:47] 2025-07-28 10:53:14,610 | INFO     | transexitcode: 0
[2025-07-28 06:53:47] 2025-07-28 10:53:14,610 | INFO     | exeerrorcode: 0
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | exeerrordiag: 
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | exitcode: 0
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | exitmsg: OK
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | cpuconsumptiontime: 46019 s
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | nevents: 400
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | neventsw: 0
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | pid: 2029768
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | pgrp: 2029768
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | corecount: 12
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | event service: False
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 5872: 2424438, 5873: 2433620, 5877: 2433758}
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | --------------------------------------------------
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | 
[2025-07-28 06:53:47] 2025-07-28 10:53:14,611 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 06:53:47] 2025-07-28 10:53:14,630 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,630 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,630 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 06:53:47] 2025-07-28 10:53:14,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,632 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 06:53:47] 2025-07-28 10:53:14,632 | INFO     | job 6745185779 has completed (purged errors)
[2025-07-28 06:53:47] 2025-07-28 10:53:14,632 | INFO     | overall cleanup function is called
[2025-07-28 06:53:47] 2025-07-28 10:53:15,639 | INFO     | --- collectZombieJob: --- 10, [2029768]
[2025-07-28 06:53:47] 2025-07-28 10:53:15,639 | INFO     | zombie collector waiting for pid 2029768
[2025-07-28 06:53:47] 2025-07-28 10:53:15,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 06:53:47] 2025-07-28 10:53:15,639 | INFO     | collected zombie processes
[2025-07-28 06:53:47] 2025-07-28 10:53:15,639 | INFO     | will attempt to kill all subprocesses of pid=2029768
[2025-07-28 06:53:47] 2025-07-28 10:53:15,869 | INFO     | process IDs to be killed: [2029768] (in reverse order)
[2025-07-28 06:53:47] 2025-07-28 10:53:15,950 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 06:53:47] 2025-07-28 10:53:15,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 06:53:47] 2025-07-28 10:53:15,960 | INFO     | did not find any defunct processes belonging to 2029768
[2025-07-28 06:53:47] 2025-07-28 10:53:15,970 | INFO     | did not find any defunct processes belonging to 2029768
[2025-07-28 06:53:47] 2025-07-28 10:53:15,970 | INFO     | ready for new job
[2025-07-28 06:53:47] 2025-07-28 10:53:15,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 06:53:47] 2025-07-28 10:53:15,972 | INFO     | ***************************************
[2025-07-28 06:53:47] 2025-07-28 10:53:15,972 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 06:53:47] 2025-07-28 10:53:15,972 | INFO     | ***************************************
[2025-07-28 06:53:47] 2025-07-28 10:53:15,972 | INFO     | 
[2025-07-28 06:53:47] 2025-07-28 10:53:15,988 | INFO     | architecture information:
[2025-07-28 06:53:47] 2025-07-28 10:53:15,988 | INFO     | executing command: cat /etc/os-release
[2025-07-28 06:53:47] 2025-07-28 10:53:16,004 | INFO     | cat /etc/os-release:
[2025-07-28 06:53:47] NAME="CentOS Linux"
[2025-07-28 06:53:47] VERSION="7 (Core)"
[2025-07-28 06:53:47] ID="centos"
[2025-07-28 06:53:47] ID_LIKE="rhel fedora"
[2025-07-28 06:53:47] VERSION_ID="7"
[2025-07-28 06:53:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 06:53:47] ANSI_COLOR="0;31"
[2025-07-28 06:53:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 06:53:47] HOME_URL="https://www.centos.org/"
[2025-07-28 06:53:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 06:53:47] 
[2025-07-28 06:53:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 06:53:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 06:53:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 06:53:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 06:53:47] 
[2025-07-28 06:53:47] 2025-07-28 10:53:16,005 | INFO     | ***************************************
[2025-07-28 06:53:47] 2025-07-28 10:53:16,508 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 06:53:47] 2025-07-28 10:53:16,526 | INFO     | sufficient remaining disk space (71198310400 B)
[2025-07-28 06:53:47] 2025-07-28 10:53:16,526 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 06:53:47] 2025-07-28 10:53:16,526 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 06:53:47] 2025-07-28 10:53:16,526 | INFO     | update_server=False
[2025-07-28 06:53:47] 2025-07-28 10:53:16,526 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 06:53:47] 2025-07-28 10:53:16,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:53:47] 2025-07-28 10:53:16,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:53:47] 2025-07-28 10:53:16,527 | INFO     | aborting loop
[2025-07-28 06:53:47] 2025-07-28 10:53:16,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 06:53:47] 2025-07-28 10:53:16,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 06:53:47] 2025-07-28 10:53:17,137 | INFO     | all data control threads have been joined
[2025-07-28 06:53:47] 2025-07-28 10:53:17,531 | INFO     | [job] retrieve thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:17,531 | INFO     | all payload control threads have been joined
[2025-07-28 06:53:47] 2025-07-28 10:53:17,532 | INFO     | [job] queue monitor thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:17,532 | INFO     | [job] job monitor thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:17,677 | INFO     | [payload] failed_post thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:17,683 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:17,710 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:18,142 | INFO     | [data] control thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:18,170 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:18,231 | INFO     | all job control threads have been joined
[2025-07-28 06:53:47] 2025-07-28 10:53:18,407 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:18,532 | INFO     | [data] copytool_out thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:18,537 | INFO     | [payload] control thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:18,675 | INFO     | [job] validate thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:18,769 | INFO     | [payload] validate_post thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:18,901 | INFO     | [data] copytool_in thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:19,236 | INFO     | [job] control thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:20,694 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 06:53:47] 2025-07-28 10:53:21,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165541754688)>', '<ExcThread(monitor, started 140164890347264)>']
[2025-07-28 06:53:47] 2025-07-28 10:53:26,435 | INFO     | all workflow threads have been joined
[2025-07-28 06:53:47] 2025-07-28 10:53:26,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 06:53:47] 2025-07-28 10:53:26,436 | INFO     | traces error code: 0
[2025-07-28 06:53:47] 2025-07-28 10:53:26,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 06:53:47] 2025-07-28 10:53:46,779 | INFO     | PID=2020434 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 06:53:47] 2025-07-28 10:53:46,779 | INFO     | .. there are 13 such processes running
[2025-07-28 06:53:47] 2025-07-28 10:53:46,779 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 06:53:47] 2025-07-28 10:53:46,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 06:53:47] 2025-07-28 10:53:46,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 06:53:47] 2025-07-28 10:53:46,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 06:53:47] 2025-07-28 10:53:46,779 | INFO     | [monitor] control thread has ended
[2025-07-28 06:53:47] 2025-07-28 10:53:46,924 [wrapper] ==== pilot stdout END ====
[2025-07-28 06:53:47] 2025-07-28 10:53:46,926 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 06:53:47] 2025-07-28 10:53:46,928 [wrapper] pilotpid: 2020434
[2025-07-28 06:53:47] 2025-07-28 10:53:46,931 [wrapper] Pilot exit status: 0
[2025-07-28 06:53:47] 2025-07-28 10:53:46,943 [wrapper] pandaids: 6745185779
[2025-07-28 06:53:47] 2025-07-28 10:53:47,000 [wrapper] cleanup supervisor_pilot 2270767 2020435
[2025-07-28 06:53:47] 2025-07-28 10:53:47,003 [wrapper] Test setup, not cleaning
[2025-07-28 06:53:47] 2025-07-28 10:53:47,006 [wrapper] apfmon messages muted
[2025-07-28 06:53:47] 2025-07-28 10:53:47,008 [wrapper] ==== wrapper stdout END ====
[2025-07-28 06:53:47] 2025-07-28 10:53:47,010 [wrapper] ==== wrapper stderr END ====
[2025-07-28 06:53:47]  *** Error codes and diagnostics ***
[2025-07-28 06:53:47]     "exeErrorCode": 0,
[2025-07-28 06:53:47]     "exeErrorDiag": "",
[2025-07-28 06:53:47]     "pilotErrorCode": 0,
[2025-07-28 06:53:47]     "pilotErrorDiag": "",
[2025-07-28 06:53:47]  *** Listing of results directory ***
[2025-07-28 06:53:47] total 350800
[2025-07-28 06:53:47] -rwx------. 1 boincer umatlas     36292 Jul 26 08:28 runpilot2-wrapper.sh
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 08:28 queuedata.json
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 08:28 pilot3.tar.gz
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas       100 Jul 28 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 06:53:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 05:14 run_atlas
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas       105 Jul 28 05:14 job.xml
[2025-07-28 06:53:47] -rw-r--r--. 2 boincer umatlas 144532379 Jul 28 05:14 EVNT.45743347._002157.pool.root.1
[2025-07-28 06:53:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 05:14 start_atlas.sh
[2025-07-28 06:53:47] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 05:14 shared
[2025-07-28 06:53:47] -rw-r--r--. 2 boincer umatlas    542892 Jul 28 05:14 input.tar.gz
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas         0 Jul 28 05:14 boinc_lockfile
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas      2563 Jul 28 05:14 pandaJob.out
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas    978452 Jul 28 05:14 agis_schedconf.cvmfs.json
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas   1593052 Jul 28 05:14 agis_ddmendpoints.agis.ALL.json
[2025-07-28 06:53:47] drwx------. 4 boincer umatlas      4096 Jul 28 05:15 pilot3
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas      6839 Jul 28 06:48 init_data.xml
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas 209008122 Jul 28 06:52 HITS.45743349._037724.pool.root.1
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas       530 Jul 28 06:52 boinc_task_state.xml
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas        95 Jul 28 06:52 pilot_heartbeat.json
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas      1040 Jul 28 06:53 memory_monitor_summary.json
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas    370145 Jul 28 06:53 log.45743349._037724.job.log.tgz.1
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas      7820 Jul 28 06:53 heartbeat.json
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas        27 Jul 28 06:53 wrapper_checkpoint.txt
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 06:53 boinc_mmap_file
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas       823 Jul 28 06:53 pilotlog.txt
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas    529311 Jul 28 06:53 log.45743349._037724.job.log.1
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas       357 Jul 28 06:53 output.list
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas       620 Jul 28 06:53 runtime_log
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas    921600 Jul 28 06:53 result.tar.gz
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas      8662 Jul 28 06:53 runtime_log.err
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas       653 Jul 28 06:53 cwZKDm5Btz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPk0KDmQ8vXdn.diag
[2025-07-28 06:53:47] -rw-r--r--. 1 boincer umatlas     21322 Jul 28 06:53 stderr.txt
[2025-07-28 06:53:47] HITS file was successfully produced:
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas 209008122 Jul 28 06:52 shared/HITS.pool.root.1
[2025-07-28 06:53:47]  *** Contents of shared directory: ***
[2025-07-28 06:53:47] total 346716
[2025-07-28 06:53:47] -rw-r--r--. 2 boincer umatlas 144532379 Jul 28 05:14 ATLAS.root_0
[2025-07-28 06:53:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 05:14 start_atlas.sh
[2025-07-28 06:53:47] -rw-r--r--. 2 boincer umatlas    542892 Jul 28 05:14 input.tar.gz
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas 209008122 Jul 28 06:52 HITS.pool.root.1
[2025-07-28 06:53:47] -rw-------. 1 boincer umatlas    921600 Jul 28 06:53 result.tar.gz
06:53:48 (2016610): run_atlas exited; CPU time 46128.270363
06:53:48 (2016610): called boinc_finish(0)

</stderr_txt>
]]>

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