Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:04:12 (3957559): wrapper (7.7.26015): starting
05:04:12 (3957559): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 05:04:12] Arguments: --nthreads 12
[2025-07-28 05:04:12] Threads: 12
[2025-07-28 05:04:12] Checking for CVMFS
[2025-07-28 05:04:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 05:04:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 05:04:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 05:04:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 05:04:12] 2.13.0.0 1395644 19600 298352 148841 1 531 27644418 32935936 9013 16776704 1 44629455 99.622 82833302 19206 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 05:04:12] CVMFS is ok
[2025-07-28 05:04:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 05:04:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 05:04:12] Further information can be found at the LHC@home message board.
[2025-07-28 05:04:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 05:04:12] Checking for apptainer binary...
[2025-07-28 05:04:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 05:04:12] Running /usr/bin/apptainer --version
[2025-07-28 05:04:12] apptainer version 1.4.1-1.el9
[2025-07-28 05:04:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 05:04:12] c6-6-39-2.aglt2.org
[2025-07-28 05:04:12] apptainer works
[2025-07-28 05:04:12] Set ATHENA_PROC_NUMBER=12
[2025-07-28 05:04:12] Set ATHENA_CORE_NUMBER=12
[2025-07-28 05:04:12] Starting ATLAS job with PandaID=6743233166
[2025-07-28 05:04:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 06:38:51]  *** The last 200 lines of the pilot log: ***
[2025-07-28 06:38:51]  is_tar=False
[2025-07-28 06:38:51]  lfn=log.45668900._000466.job.log.tgz.1
[2025-07-28 06:38:51]  mtime=0
[2025-07-28 06:38:51]  protocol_id=None
[2025-07-28 06:38:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 06:38:51]  replicas=None
[2025-07-28 06:38:51]  scope=mc23_13p6TeV
[2025-07-28 06:38:51]  status=None
[2025-07-28 06:38:51]  status_code=0
[2025-07-28 06:38:51]  storage_token=
[2025-07-28 06:38:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6743233166/log.45668900._000466.job.log.tgz.1
[2025-07-28 06:38:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/f3/log.45668900._000466.job.log.tgz.1
[2025-07-28 06:38:51]  workdir=None
[2025-07-28 06:38:51] ]
[2025-07-28 06:38:51] 2025-07-28 10:38:12,866 | INFO     | transferring file log.45668900._000466.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6743233166/log.45668900._000466.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 06:38:51] 2025-07-28 10:38:12,867 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6743233166/log.45668900._000466.job.log.tgz.1 /tmp/boinchome/slots/0/log.45668900._000466.job
[2025-07-28 06:38:51] 2025-07-28 10:38:12,887 | INFO     | adding to output.list: log.45668900._000466.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/f3/log.45668900._000466.job.log.tg
[2025-07-28 06:38:51] 2025-07-28 10:38:12,889 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 06:38:51] 2025-07-28 10:38:12,889 | INFO     | summary of transferred files:
[2025-07-28 06:38:51] 2025-07-28 10:38:12,889 | INFO     |  -- lfn=log.45668900._000466.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 06:38:51] 2025-07-28 10:38:12,890 | INFO     | stage-out finished correctly
[2025-07-28 06:38:51] 2025-07-28 10:38:13,322 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 06:38:51] 2025-07-28 10:38:13,862 | INFO     | job 6743233166 has state=finished
[2025-07-28 06:38:51] 2025-07-28 10:38:13,862 | INFO     | preparing for final server update for job 6743233166 in state='finished'
[2025-07-28 06:38:51] 2025-07-28 10:38:13,862 | INFO     | this job has now completed (state=finished)
[2025-07-28 06:38:51] 2025-07-28 10:38:13,862 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 06:38:51] 2025-07-28 10:38:13,863 | INFO     | log transfer has been attempted: DONE
[2025-07-28 06:38:51] 2025-07-28 10:38:13,863 | INFO     | job 6743233166 has finished - writing final server update
[2025-07-28 06:38:51] 2025-07-28 10:38:13,863 | INFO     | total number of processed events: 400 (read)
[2025-07-28 06:38:51] 2025-07-28 10:38:13,864 | INFO     | executing command: lscpu
[2025-07-28 06:38:51] 2025-07-28 10:38:13,917 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 06:38:51] 2025-07-28 10:38:14,595 | WARNING  | process 3969669 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 06:38:51] 2025-07-28 10:38:14,596 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6743233166/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 06:38:51] 2025-07-28 10:38:14,879 | INFO     | number of running child processes to parent process 3969669: 1
[2025-07-28 06:38:51] 2025-07-28 10:38:14,879 | INFO     | maximum number of monitored processes: 6
[2025-07-28 06:38:51] 2025-07-28 10:38:17,382 | INFO     | monitor loop #412: job 0:6743233166 is in state 'finished'
[2025-07-28 06:38:51] 2025-07-28 10:38:17,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:38:51] 2025-07-28 10:38:18,648 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 06:38:51] 2025-07-28 10:38:18,651 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2614.956785714285
[2025-07-28 06:38:51] 2025-07-28 10:38:18,660 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6743233166/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 06:38:51] 2025-07-28 10:38:18,661 | INFO     | extracted standard info from prmon json
[2025-07-28 06:38:51] 2025-07-28 10:38:18,661 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 06:38:51] 2025-07-28 10:38:18,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 06:38:51] 2025-07-28 10:38:18,661 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 06:38:51] 2025-07-28 10:38:18,661 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 06:38:51] 2025-07-28 10:38:18,663 | INFO     | fitting pss+swap vs Time
[2025-07-28 06:38:51] 2025-07-28 10:38:18,663 | INFO     | sum of square deviations: 190403570.0
[2025-07-28 06:38:51] 2025-07-28 10:38:18,664 | INFO     | sum of deviations: -552302844.9999999
[2025-07-28 06:38:51] 2025-07-28 10:38:18,664 | INFO     | mean x: 1753696363.0
[2025-07-28 06:38:51] 2025-07-28 10:38:18,664 | INFO     | mean y: 2402909.294117647
[2025-07-28 06:38:51] 2025-07-28 10:38:18,664 | INFO     | -- intersect: 5089342668.622436
[2025-07-28 06:38:51] 2025-07-28 10:38:18,664 | INFO     | intersect: 5089342668.622436
[2025-07-28 06:38:51] 2025-07-28 10:38:18,664 | INFO     | chi2: 0.09377324818808755
[2025-07-28 06:38:51] 2025-07-28 10:38:18,664 | INFO     | -- intersect: 5089342668.622436
[2025-07-28 06:38:51] 2025-07-28 10:38:18,664 | INFO     | current memory leak: -2.90 B/s (using 85 data points, chi2=0.09)
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | could have reported an average CPU frequency of 2640 MHz (7 samples)
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | ..............................
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | . Timing measurements:
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | . get job = 0 s
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | . initial setup = 2 s
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | . payload setup = 8 s
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | . stage-in = 0 s
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | . payload execution = 5596 s
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | . stage-out = 1 s
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | . log creation = 0 s
[2025-07-28 06:38:51] 2025-07-28 10:38:18,665 | INFO     | ..............................
[2025-07-28 06:38:51] 2025-07-28 10:38:18,750 | INFO     | 
[2025-07-28 06:38:51] 2025-07-28 10:38:18,750 | INFO     | job summary report
[2025-07-28 06:38:51] 2025-07-28 10:38:18,750 | INFO     | --------------------------------------------------
[2025-07-28 06:38:51] 2025-07-28 10:38:18,751 | INFO     | PanDA job id: 6743233166
[2025-07-28 06:38:51] 2025-07-28 10:38:18,751 | INFO     | task id: 45668900
[2025-07-28 06:38:51] 2025-07-28 10:38:18,751 | INFO     | errors: (none)
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | pilot state: finished 
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | transexitcode: 0
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | exeerrorcode: 0
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | exeerrordiag: 
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | exitcode: 0
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | exitmsg: OK
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | cpuconsumptiontime: 60201 s
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | nevents: 400
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | neventsw: 0
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | pid: 3969669
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | pgrp: 3969669
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | corecount: 12
[2025-07-28 06:38:51] 2025-07-28 10:38:18,752 | INFO     | event service: False
[2025-07-28 06:38:51] 2025-07-28 10:38:18,753 | INFO     | sizes: {0: 2397438, 5: 2397700, 11: 2397756, 5608: 2424280, 5609: 2424279, 5611: 2433333, 5612: 2433517, 5617: 2433711}
[2025-07-28 06:38:51] 2025-07-28 10:38:18,753 | INFO     | --------------------------------------------------
[2025-07-28 06:38:51] 2025-07-28 10:38:18,753 | INFO     | 
[2025-07-28 06:38:51] 2025-07-28 10:38:18,753 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 06:38:51] 2025-07-28 10:38:18,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,773 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 06:38:51] 2025-07-28 10:38:18,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 06:38:51] 2025-07-28 10:38:18,775 | INFO     | job 6743233166 has completed (purged errors)
[2025-07-28 06:38:51] 2025-07-28 10:38:18,775 | INFO     | overall cleanup function is called
[2025-07-28 06:38:51] 2025-07-28 10:38:19,783 | INFO     | --- collectZombieJob: --- 10, [3969669]
[2025-07-28 06:38:51] 2025-07-28 10:38:19,784 | INFO     | zombie collector waiting for pid 3969669
[2025-07-28 06:38:51] 2025-07-28 10:38:19,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 06:38:51] 2025-07-28 10:38:19,784 | INFO     | collected zombie processes
[2025-07-28 06:38:51] 2025-07-28 10:38:19,784 | INFO     | will attempt to kill all subprocesses of pid=3969669
[2025-07-28 06:38:51] 2025-07-28 10:38:20,032 | INFO     | process IDs to be killed: [3969669] (in reverse order)
[2025-07-28 06:38:51] 2025-07-28 10:38:20,105 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 06:38:51] 2025-07-28 10:38:20,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 06:38:51] 2025-07-28 10:38:20,116 | INFO     | did not find any defunct processes belonging to 3969669
[2025-07-28 06:38:51] 2025-07-28 10:38:20,126 | INFO     | did not find any defunct processes belonging to 3969669
[2025-07-28 06:38:51] 2025-07-28 10:38:20,127 | INFO     | ready for new job
[2025-07-28 06:38:51] 2025-07-28 10:38:20,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 06:38:51] 2025-07-28 10:38:20,129 | INFO     | ***************************************
[2025-07-28 06:38:51] 2025-07-28 10:38:20,129 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 06:38:51] 2025-07-28 10:38:20,129 | INFO     | ***************************************
[2025-07-28 06:38:51] 2025-07-28 10:38:20,129 | INFO     | 
[2025-07-28 06:38:51] 2025-07-28 10:38:20,146 | INFO     | architecture information:
[2025-07-28 06:38:51] 2025-07-28 10:38:20,146 | INFO     | executing command: cat /etc/os-release
[2025-07-28 06:38:51] 2025-07-28 10:38:20,161 | INFO     | cat /etc/os-release:
[2025-07-28 06:38:51] NAME="CentOS Linux"
[2025-07-28 06:38:51] VERSION="7 (Core)"
[2025-07-28 06:38:51] ID="centos"
[2025-07-28 06:38:51] ID_LIKE="rhel fedora"
[2025-07-28 06:38:51] VERSION_ID="7"
[2025-07-28 06:38:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 06:38:51] ANSI_COLOR="0;31"
[2025-07-28 06:38:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 06:38:51] HOME_URL="https://www.centos.org/"
[2025-07-28 06:38:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 06:38:51] 
[2025-07-28 06:38:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 06:38:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 06:38:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 06:38:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 06:38:51] 
[2025-07-28 06:38:51] 2025-07-28 10:38:20,162 | INFO     | ***************************************
[2025-07-28 06:38:51] 2025-07-28 10:38:20,665 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 06:38:51] 2025-07-28 10:38:20,683 | INFO     | sufficient remaining disk space (73929850880 B)
[2025-07-28 06:38:51] 2025-07-28 10:38:20,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 06:38:51] 2025-07-28 10:38:20,684 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 06:38:51] 2025-07-28 10:38:20,684 | INFO     | update_server=False
[2025-07-28 06:38:51] 2025-07-28 10:38:20,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 06:38:51] 2025-07-28 10:38:20,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:38:51] 2025-07-28 10:38:20,888 | INFO     | all payload control threads have been joined
[2025-07-28 06:38:51] 2025-07-28 10:38:20,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:38:51] 2025-07-28 10:38:20,891 | INFO     | aborting loop
[2025-07-28 06:38:51] 2025-07-28 10:38:21,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 06:38:51] 2025-07-28 10:38:21,622 | INFO     | all job control threads have been joined
[2025-07-28 06:38:51] 2025-07-28 10:38:21,634 | INFO     | all data control threads have been joined
[2025-07-28 06:38:51] 2025-07-28 10:38:21,688 | INFO     | [job] retrieve thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:21,689 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:21,689 | INFO     | [job] queue monitor thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:21,892 | INFO     | [payload] control thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:21,895 | INFO     | [job] job monitor thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:22,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:22,146 | INFO     | [data] copytool_in thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:22,390 | INFO     | [job] validate thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:22,512 | INFO     | [payload] failed_post thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:22,627 | INFO     | [job] control thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:22,639 | INFO     | [data] control thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:22,758 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:22,908 | INFO     | [payload] validate_post thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:22,909 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:23,024 | INFO     | [data] copytool_out thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:23,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 06:38:51] 2025-07-28 10:38:27,940 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 06:38:51] 2025-07-28 10:38:27,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787364026176)>', '<ExcThread(monitor, started 139786840938240)>']
[2025-07-28 06:38:51] 2025-07-28 10:38:32,989 | INFO     | all workflow threads have been joined
[2025-07-28 06:38:51] 2025-07-28 10:38:32,990 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 06:38:51] 2025-07-28 10:38:32,990 | INFO     | traces error code: 0
[2025-07-28 06:38:51] 2025-07-28 10:38:32,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 06:38:51] 2025-07-28 10:38:50,939 | INFO     | PID=3961245 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 06:38:51] 2025-07-28 10:38:50,939 | INFO     | .. there are 13 such processes running
[2025-07-28 06:38:51] 2025-07-28 10:38:50,939 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 06:38:51] 2025-07-28 10:38:50,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 06:38:51] 2025-07-28 10:38:50,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 06:38:51] 2025-07-28 10:38:50,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 06:38:51] 2025-07-28 10:38:50,940 | INFO     | [monitor] control thread has ended
[2025-07-28 06:38:51] 2025-07-28 10:38:51,111 [wrapper] ==== pilot stdout END ====
[2025-07-28 06:38:51] 2025-07-28 10:38:51,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 06:38:51] 2025-07-28 10:38:51,118 [wrapper] pilotpid: 3961245
[2025-07-28 06:38:51] 2025-07-28 10:38:51,121 [wrapper] Pilot exit status: 0
[2025-07-28 06:38:51] 2025-07-28 10:38:51,131 [wrapper] pandaids: 6743233166
[2025-07-28 06:38:51] 2025-07-28 10:38:51,207 [wrapper] cleanup supervisor_pilot   19096 3961246
[2025-07-28 06:38:51] 2025-07-28 10:38:51,211 [wrapper] Test setup, not cleaning
[2025-07-28 06:38:51] 2025-07-28 10:38:51,214 [wrapper] apfmon messages muted
[2025-07-28 06:38:51] 2025-07-28 10:38:51,218 [wrapper] ==== wrapper stdout END ====
[2025-07-28 06:38:51] 2025-07-28 10:38:51,221 [wrapper] ==== wrapper stderr END ====
[2025-07-28 06:38:51]  *** Error codes and diagnostics ***
[2025-07-28 06:38:51]     "exeErrorCode": 0,
[2025-07-28 06:38:51]     "exeErrorDiag": "",
[2025-07-28 06:38:51]     "pilotErrorCode": 0,
[2025-07-28 06:38:51]     "pilotErrorDiag": "",
[2025-07-28 06:38:51]  *** Listing of results directory ***
[2025-07-28 06:38:51] total 470060
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 13:02 pilot3.tar.gz
[2025-07-28 06:38:51] -rwx------. 1 boincer umatlas     36292 Jul 23 13:08 runpilot2-wrapper.sh
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 13:08 queuedata.json
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas       100 Jul 28 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 06:38:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 05:04 run_atlas
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas       105 Jul 28 05:04 job.xml
[2025-07-28 06:38:51] -rw-r--r--. 2 boincer umatlas 276352601 Jul 28 05:04 EVNT.45668898._000019.pool.root.1
[2025-07-28 06:38:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 05:04 start_atlas.sh
[2025-07-28 06:38:51] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 05:04 shared
[2025-07-28 06:38:51] -rw-r--r--. 2 boincer umatlas    542873 Jul 28 05:04 input.tar.gz
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas         0 Jul 28 05:04 boinc_lockfile
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas      2536 Jul 28 05:04 pandaJob.out
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas    978452 Jul 28 05:04 agis_schedconf.cvmfs.json
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas   1593052 Jul 28 05:04 agis_ddmendpoints.agis.ALL.json
[2025-07-28 06:38:51] drwx------. 4 boincer umatlas      4096 Jul 28 05:04 pilot3
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas 199292990 Jul 28 06:37 HITS.45668900._000466.pool.root.1
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas       530 Jul 28 06:37 boinc_task_state.xml
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas      1040 Jul 28 06:38 memory_monitor_summary.json
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas    371445 Jul 28 06:38 log.45668900._000466.job.log.tgz.1
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas        95 Jul 28 06:38 pilot_heartbeat.json
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas      7813 Jul 28 06:38 heartbeat.json
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas      6840 Jul 28 06:38 init_data.xml
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 06:38 boinc_mmap_file
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas        27 Jul 28 06:38 wrapper_checkpoint.txt
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas       823 Jul 28 06:38 pilotlog.txt
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas    545901 Jul 28 06:38 log.45668900._000466.job.log.1
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas       357 Jul 28 06:38 output.list
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas       620 Jul 28 06:38 runtime_log
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas    931840 Jul 28 06:38 result.tar.gz
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas       655 Jul 28 06:38 trmLDm17ry7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVzLLDm8Nudmn.diag
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 06:38 runtime_log.err
[2025-07-28 06:38:51] -rw-r--r--. 1 boincer umatlas     21626 Jul 28 06:38 stderr.txt
[2025-07-28 06:38:51] HITS file was successfully produced:
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas 199292990 Jul 28 06:37 shared/HITS.pool.root.1
[2025-07-28 06:38:51]  *** Contents of shared directory: ***
[2025-07-28 06:38:51] total 465960
[2025-07-28 06:38:51] -rw-r--r--. 2 boincer umatlas 276352601 Jul 28 05:04 ATLAS.root_0
[2025-07-28 06:38:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 05:04 start_atlas.sh
[2025-07-28 06:38:51] -rw-r--r--. 2 boincer umatlas    542873 Jul 28 05:04 input.tar.gz
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas 199292990 Jul 28 06:37 HITS.pool.root.1
[2025-07-28 06:38:51] -rw-------. 1 boincer umatlas    931840 Jul 28 06:38 result.tar.gz
06:38:52 (3957559): run_atlas exited; CPU time 60325.816279
06:38:52 (3957559): called boinc_finish(0)

</stderr_txt>
]]>

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