Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:45:20 (3953923): wrapper (7.7.26015): starting
06:45:20 (3953923): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 06:45:20] Arguments: --nthreads 12
[2025-07-28 06:45:20] Threads: 12
[2025-07-28 06:45:20] Checking for CVMFS
[2025-07-28 06:45:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 06:45:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 06:45:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 06:45:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 06:45:21] 2.12.6.0 951823 19699 257888 148845 2 270 37443390 40960000 11994 16776704 0 44030671 99.711 56956236 27970 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 06:45:21] CVMFS is ok
[2025-07-28 06:45:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 06:45:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 06:45:21] Further information can be found at the LHC@home message board.
[2025-07-28 06:45:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 06:45:21] Checking for apptainer binary...
[2025-07-28 06:45:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 06:45:21] Running /usr/bin/apptainer --version
[2025-07-28 06:45:21] apptainer version 1.4.1-1.el9
[2025-07-28 06:45:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 06:45:22] c6-8-12-3.aglt2.org
[2025-07-28 06:45:22] apptainer works
[2025-07-28 06:45:22] Set ATHENA_PROC_NUMBER=12
[2025-07-28 06:45:22] Set ATHENA_CORE_NUMBER=12
[2025-07-28 06:45:22] Starting ATLAS job with PandaID=6748260581
[2025-07-28 06:45:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 08:09:05]  *** The last 200 lines of the pilot log: ***
[2025-07-28 08:09:05]  mtime=0
[2025-07-28 08:09:05]  protocol_id=None
[2025-07-28 08:09:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 08:09:05]  replicas=None
[2025-07-28 08:09:05]  scope=mc23_13p6TeV
[2025-07-28 08:09:05]  status=None
[2025-07-28 08:09:05]  status_code=0
[2025-07-28 08:09:05]  storage_token=
[2025-07-28 08:09:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748260581/log.45743349._055684.job.log.tgz.1
[2025-07-28 08:09:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/18/log.45743349._055684.job.log.tgz.1
[2025-07-28 08:09:05]  workdir=None
[2025-07-28 08:09:05] ]
[2025-07-28 08:09:05] 2025-07-28 12:08:38,762 | INFO     | transferring file log.45743349._055684.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748260581/log.45743349._055684.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 08:09:05] 2025-07-28 12:08:38,762 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748260581/log.45743349._055684.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._055684.job
[2025-07-28 08:09:05] 2025-07-28 12:08:38,783 | INFO     | adding to output.list: log.45743349._055684.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/18/log.45743349._055684.job.log.tg
[2025-07-28 08:09:05] 2025-07-28 12:08:38,784 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 08:09:05] 2025-07-28 12:08:38,784 | INFO     | summary of transferred files:
[2025-07-28 08:09:05] 2025-07-28 12:08:38,784 | INFO     |  -- lfn=log.45743349._055684.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 08:09:05] 2025-07-28 12:08:38,784 | INFO     | stage-out finished correctly
[2025-07-28 08:09:05] 2025-07-28 12:08:39,340 | INFO     | monitor loop #341: job 0:6748260581 is in state 'finished'
[2025-07-28 08:09:05] 2025-07-28 12:08:39,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 08:09:05] 2025-07-28 12:08:39,709 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 08:09:05] 2025-07-28 12:08:41,638 | INFO     | job 6748260581 has state=finished
[2025-07-28 08:09:05] 2025-07-28 12:08:41,638 | INFO     | preparing for final server update for job 6748260581 in state='finished'
[2025-07-28 08:09:05] 2025-07-28 12:08:41,639 | INFO     | this job has now completed (state=finished)
[2025-07-28 08:09:05] 2025-07-28 12:08:41,639 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 08:09:05] 2025-07-28 12:08:41,639 | INFO     | log transfer has been attempted: DONE
[2025-07-28 08:09:05] 2025-07-28 12:08:41,639 | INFO     | job 6748260581 has finished - writing final server update
[2025-07-28 08:09:05] 2025-07-28 12:08:41,640 | INFO     | total number of processed events: 400 (read)
[2025-07-28 08:09:05] 2025-07-28 12:08:41,640 | INFO     | executing command: lscpu
[2025-07-28 08:09:05] 2025-07-28 12:08:41,676 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 08:09:05] 2025-07-28 12:08:41,844 | INFO     | monitor loop #342: job 0:6748260581 is in state 'finished'
[2025-07-28 08:09:05] 2025-07-28 12:08:41,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 08:09:05] 2025-07-28 12:08:44,347 | INFO     | monitor loop #343: job 0:6748260581 is in state 'finished'
[2025-07-28 08:09:05] 2025-07-28 12:08:44,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 08:09:05] 2025-07-28 12:08:45,308 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 08:09:05] 2025-07-28 12:08:45,312 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2765.978803571429
[2025-07-28 08:09:05] 2025-07-28 12:08:45,322 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748260581/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 08:09:05] 2025-07-28 12:08:45,323 | INFO     | extracted standard info from prmon json
[2025-07-28 08:09:05] 2025-07-28 12:08:45,323 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 08:09:05] 2025-07-28 12:08:45,323 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 08:09:05] 2025-07-28 12:08:45,323 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 08:09:05] 2025-07-28 12:08:45,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 08:09:05] 2025-07-28 12:08:45,326 | INFO     | fitting pss+swap vs Time
[2025-07-28 08:09:05] 2025-07-28 12:08:45,326 | INFO     | sum of square deviations: 130810972.08000024
[2025-07-28 08:09:05] 2025-07-28 12:08:45,326 | INFO     | sum of deviations: -14840877883.52
[2025-07-28 08:09:05] 2025-07-28 12:08:45,326 | INFO     | mean x: 1753702127.16
[2025-07-28 08:09:05] 2025-07-28 12:08:45,326 | INFO     | mean y: 2630965.96
[2025-07-28 08:09:05] 2025-07-28 12:08:45,327 | INFO     | -- intersect: 198965139228.13983
[2025-07-28 08:09:05] 2025-07-28 12:08:45,327 | INFO     | intersect: 198965139228.13983
[2025-07-28 08:09:05] 2025-07-28 12:08:45,327 | INFO     | chi2: 0.14921822941667737
[2025-07-28 08:09:05] 2025-07-28 12:08:45,327 | INFO     | -- intersect: 198965139228.13983
[2025-07-28 08:09:05] 2025-07-28 12:08:45,327 | INFO     | current memory leak: -113.45 B/s (using 75 data points, chi2=0.15)
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | could have reported an average CPU frequency of 2807 MHz (6 samples)
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | ..............................
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | . Timing measurements:
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | . get job = 0 s
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | . initial setup = 2 s
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | . payload setup = 7 s
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | . stage-in = 0 s
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | . payload execution = 4955 s
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | . stage-out = 0 s
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | . log creation = 0 s
[2025-07-28 08:09:05] 2025-07-28 12:08:45,328 | INFO     | ..............................
[2025-07-28 08:09:05] 2025-07-28 12:08:45,419 | INFO     | 
[2025-07-28 08:09:05] 2025-07-28 12:08:45,419 | INFO     | job summary report
[2025-07-28 08:09:05] 2025-07-28 12:08:45,419 | INFO     | --------------------------------------------------
[2025-07-28 08:09:05] 2025-07-28 12:08:45,419 | INFO     | PanDA job id: 6748260581
[2025-07-28 08:09:05] 2025-07-28 12:08:45,419 | INFO     | task id: 45743349
[2025-07-28 08:09:05] 2025-07-28 12:08:45,419 | INFO     | errors: (none)
[2025-07-28 08:09:05] 2025-07-28 12:08:45,419 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 08:09:05] 2025-07-28 12:08:45,419 | INFO     | pilot state: finished 
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | transexitcode: 0
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | exeerrorcode: 0
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | exeerrordiag: 
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | exitcode: 0
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | exitmsg: OK
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | cpuconsumptiontime: 44329 s
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | nevents: 400
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | neventsw: 0
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | pid: 3964610
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | pgrp: 3964610
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | corecount: 12
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | event service: False
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | sizes: {0: 2397253, 1: 2397452, 7: 2397714, 12: 2397742, 4966: 2423960, 4967: 2432958, 4968: 2433142, 4974: 2433336}
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | --------------------------------------------------
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | 
[2025-07-28 08:09:05] 2025-07-28 12:08:45,420 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 08:09:05] 2025-07-28 12:08:45,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,443 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 08:09:05] 2025-07-28 12:08:45,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 08:09:05] 2025-07-28 12:08:45,444 | INFO     | job 6748260581 has completed (purged errors)
[2025-07-28 08:09:05] 2025-07-28 12:08:45,444 | INFO     | overall cleanup function is called
[2025-07-28 08:09:05] 2025-07-28 12:08:46,453 | INFO     | --- collectZombieJob: --- 10, [3964610]
[2025-07-28 08:09:05] 2025-07-28 12:08:46,453 | INFO     | zombie collector waiting for pid 3964610
[2025-07-28 08:09:05] 2025-07-28 12:08:46,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 08:09:05] 2025-07-28 12:08:46,453 | INFO     | collected zombie processes
[2025-07-28 08:09:05] 2025-07-28 12:08:46,453 | INFO     | will attempt to kill all subprocesses of pid=3964610
[2025-07-28 08:09:05] 2025-07-28 12:08:46,844 | INFO     | PID=3957658 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 08:09:05] 2025-07-28 12:08:46,844 | INFO     | .. there are 16 such processes running
[2025-07-28 08:09:05] 2025-07-28 12:08:46,962 | INFO     | process IDs to be killed: [3964610] (in reverse order)
[2025-07-28 08:09:05] 2025-07-28 12:08:47,054 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 08:09:05] 2025-07-28 12:08:47,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 08:09:05] 2025-07-28 12:08:47,067 | INFO     | did not find any defunct processes belonging to 3964610
[2025-07-28 08:09:05] 2025-07-28 12:08:47,078 | INFO     | did not find any defunct processes belonging to 3964610
[2025-07-28 08:09:05] 2025-07-28 12:08:47,079 | INFO     | ready for new job
[2025-07-28 08:09:05] 2025-07-28 12:08:47,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 08:09:05] 2025-07-28 12:08:47,080 | INFO     | ***************************************
[2025-07-28 08:09:05] 2025-07-28 12:08:47,080 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 08:09:05] 2025-07-28 12:08:47,081 | INFO     | ***************************************
[2025-07-28 08:09:05] 2025-07-28 12:08:47,081 | INFO     | 
[2025-07-28 08:09:05] 2025-07-28 12:08:47,096 | INFO     | architecture information:
[2025-07-28 08:09:05] 2025-07-28 12:08:47,096 | INFO     | executing command: cat /etc/os-release
[2025-07-28 08:09:05] 2025-07-28 12:08:47,110 | INFO     | cat /etc/os-release:
[2025-07-28 08:09:05] NAME="CentOS Linux"
[2025-07-28 08:09:05] VERSION="7 (Core)"
[2025-07-28 08:09:05] ID="centos"
[2025-07-28 08:09:05] ID_LIKE="rhel fedora"
[2025-07-28 08:09:05] VERSION_ID="7"
[2025-07-28 08:09:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 08:09:05] ANSI_COLOR="0;31"
[2025-07-28 08:09:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 08:09:05] HOME_URL="https://www.centos.org/"
[2025-07-28 08:09:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 08:09:05] 
[2025-07-28 08:09:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 08:09:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 08:09:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 08:09:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 08:09:05] 
[2025-07-28 08:09:05] 2025-07-28 12:08:47,110 | INFO     | ***************************************
[2025-07-28 08:09:05] 2025-07-28 12:08:47,613 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 08:09:05] 2025-07-28 12:08:47,629 | INFO     | sufficient remaining disk space (56453234688 B)
[2025-07-28 08:09:05] 2025-07-28 12:08:47,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 08:09:05] 2025-07-28 12:08:47,630 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 08:09:05] 2025-07-28 12:08:47,630 | INFO     | update_server=False
[2025-07-28 08:09:05] 2025-07-28 12:08:47,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 08:09:05] 2025-07-28 12:08:47,631 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 08:09:05] 2025-07-28 12:08:47,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 08:09:05] 2025-07-28 12:08:47,631 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 08:09:05] 2025-07-28 12:08:47,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 08:09:05] 2025-07-28 12:08:47,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 08:09:05] 2025-07-28 12:08:47,791 | INFO     | all data control threads have been joined
[2025-07-28 08:09:05] 2025-07-28 12:08:47,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 08:09:05] 2025-07-28 12:08:47,860 | INFO     | aborting loop
[2025-07-28 08:09:05] 2025-07-28 12:08:47,994 | INFO     | all payload control threads have been joined
[2025-07-28 08:09:05] 2025-07-28 12:08:48,635 | INFO     | [job] retrieve thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:48,652 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:48,796 | INFO     | [data] control thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:48,865 | INFO     | [job] job monitor thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:48,992 | INFO     | all job control threads have been joined
[2025-07-28 08:09:05] 2025-07-28 12:08:49,000 | INFO     | [payload] control thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:49,323 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:49,376 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:49,506 | INFO     | [payload] failed_post thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:49,637 | INFO     | [data] copytool_out thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:49,762 | INFO     | [data] copytool_in thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:49,988 | INFO     | [job] validate thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:49,997 | INFO     | [job] control thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:50,168 | INFO     | [payload] validate_post thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:50,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 08:09:05] 2025-07-28 12:08:50,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 08:09:05] 2025-07-28 12:08:51,434 | INFO     | [job] queue monitor thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:54,303 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:08:57,927 | INFO     | job.realtimelogging is not enabled
[2025-07-28 08:09:05] 2025-07-28 12:08:58,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 08:09:05] 2025-07-28 12:09:00,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139878371972928)>', '<ExcThread(monitor, started 139877739910912)>']
[2025-07-28 08:09:05] 2025-07-28 12:09:00,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 08:09:05] 2025-07-28 12:09:00,697 | INFO     | [monitor] control thread has ended
[2025-07-28 08:09:05] 2025-07-28 12:09:05,164 | INFO     | all workflow threads have been joined
[2025-07-28 08:09:05] 2025-07-28 12:09:05,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 08:09:05] 2025-07-28 12:09:05,164 | INFO     | traces error code: 0
[2025-07-28 08:09:05] 2025-07-28 12:09:05,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 08:09:05] 2025-07-28 12:09:05,290 [wrapper] ==== pilot stdout END ====
[2025-07-28 08:09:05] 2025-07-28 12:09:05,293 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 08:09:05] 2025-07-28 12:09:05,295 [wrapper] pilotpid: 3957658
[2025-07-28 08:09:05] 2025-07-28 12:09:05,298 [wrapper] Pilot exit status: 0
[2025-07-28 08:09:05] 2025-07-28 12:09:05,308 [wrapper] pandaids: 6748260581
[2025-07-28 08:09:05] 2025-07-28 12:09:05,373 [wrapper] cleanup supervisor_pilot  149451 3957659
[2025-07-28 08:09:05] 2025-07-28 12:09:05,376 [wrapper] Test setup, not cleaning
[2025-07-28 08:09:05] 2025-07-28 12:09:05,379 [wrapper] apfmon messages muted
[2025-07-28 08:09:05] 2025-07-28 12:09:05,382 [wrapper] ==== wrapper stdout END ====
[2025-07-28 08:09:05] 2025-07-28 12:09:05,384 [wrapper] ==== wrapper stderr END ====
[2025-07-28 08:09:05]  *** Error codes and diagnostics ***
[2025-07-28 08:09:05]     "exeErrorCode": 0,
[2025-07-28 08:09:05]     "exeErrorDiag": "",
[2025-07-28 08:09:05]     "pilotErrorCode": 0,
[2025-07-28 08:09:05]     "pilotErrorDiag": "",
[2025-07-28 08:09:05]  *** Listing of results directory ***
[2025-07-28 08:09:05] total 432568
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:58 pilot3.tar.gz
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 17:15 queuedata.json
[2025-07-28 08:09:05] -rwx------. 1 boincer umatlas     36292 Jul 27 17:15 runpilot2-wrapper.sh
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas       100 Jul 28 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 08:09:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 06:45 run_atlas
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas       105 Jul 28 06:45 job.xml
[2025-07-28 08:09:05] -rw-r--r--. 2 boincer umatlas 228737137 Jul 28 06:45 EVNT.45743347._002735.pool.root.1
[2025-07-28 08:09:05] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 06:45 shared
[2025-07-28 08:09:05] -rw-r--r--. 2 boincer umatlas    542898 Jul 28 06:45 input.tar.gz
[2025-07-28 08:09:05] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 06:45 start_atlas.sh
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas         0 Jul 28 06:45 boinc_lockfile
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas      2562 Jul 28 06:45 pandaJob.out
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas    978460 Jul 28 06:45 agis_schedconf.cvmfs.json
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas   1593052 Jul 28 06:45 agis_ddmendpoints.agis.ALL.json
[2025-07-28 08:09:05] drwx------. 4 boincer umatlas      4096 Jul 28 06:45 pilot3
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas      6842 Jul 28 08:03 init_data.xml
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas 208662443 Jul 28 08:08 HITS.45743349._055684.pool.root.1
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas       530 Jul 28 08:08 boinc_task_state.xml
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas        95 Jul 28 08:08 pilot_heartbeat.json
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas      1043 Jul 28 08:08 memory_monitor_summary.json
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas    366400 Jul 28 08:08 log.45743349._055684.job.log.tgz.1
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas        27 Jul 28 08:08 wrapper_checkpoint.txt
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 08:08 boinc_mmap_file
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas      7830 Jul 28 08:08 heartbeat.json
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas      4552 Jul 28 08:09 pilotlog.txt
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas    471045 Jul 28 08:09 log.45743349._055684.job.log.1
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas       357 Jul 28 08:09 output.list
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas       620 Jul 28 08:09 runtime_log
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas    860160 Jul 28 08:09 result.tar.gz
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas       653 Jul 28 08:09 TkRLDmptN07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsUWLDmzaSQ2m.diag
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 08:09 runtime_log.err
[2025-07-28 08:09:05] -rw-r--r--. 1 boincer umatlas     21761 Jul 28 08:09 stderr.txt
[2025-07-28 08:09:05] HITS file was successfully produced:
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas 208662443 Jul 28 08:08 shared/HITS.pool.root.1
[2025-07-28 08:09:05]  *** Contents of shared directory: ***
[2025-07-28 08:09:05] total 428540
[2025-07-28 08:09:05] -rw-r--r--. 2 boincer umatlas 228737137 Jul 28 06:45 ATLAS.root_0
[2025-07-28 08:09:05] -rw-r--r--. 2 boincer umatlas    542898 Jul 28 06:45 input.tar.gz
[2025-07-28 08:09:05] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 06:45 start_atlas.sh
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas 208662443 Jul 28 08:08 HITS.pool.root.1
[2025-07-28 08:09:05] -rw-------. 1 boincer umatlas    860160 Jul 28 08:09 result.tar.gz
08:09:06 (3953923): run_atlas exited; CPU time 44423.434127
08:09:06 (3953923): called boinc_finish(0)

</stderr_txt>
]]>

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