Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:20:38 (26528): wrapper (7.7.26015): starting
02:20:38 (26528): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 02:20:38] Arguments: --nthreads 8
[2025-07-28 02:20:38] Threads: 8
[2025-07-28 02:20:38] Checking for CVMFS
[2025-07-28 02:20:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 02:20:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 02:20:38] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 02:20:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 02:20:38] 2.11.2.0 2846 113074 111176 148839 2 1 13429449 20275201 1 130560 0 29843465 99.942 10591609 10841 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 02:20:38] CVMFS is ok
[2025-07-28 02:20:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 02:20:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 02:20:38] Further information can be found at the LHC@home message board.
[2025-07-28 02:20:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 02:20:38] Checking for apptainer binary...
[2025-07-28 02:20:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 02:20:38] Running /usr/bin/apptainer --version
[2025-07-28 02:20:38] apptainer version 1.3.2-1.el7
[2025-07-28 02:20:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 02:20:40] c-204-10.aglt2.org
[2025-07-28 02:20:40] apptainer works
[2025-07-28 02:20:40] Set ATHENA_PROC_NUMBER=8
[2025-07-28 02:20:40] Set ATHENA_CORE_NUMBER=8
[2025-07-28 02:20:40] Starting ATLAS job with PandaID=6748489874
[2025-07-28 02:20:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 04:44:22]  *** The last 200 lines of the pilot log: ***
[2025-07-28 04:44:22] 2025-07-28 08:43:47,030 | INFO     | monitor loop #632: job 0:6748489874 is in state 'finished'
[2025-07-28 04:44:22] 2025-07-28 08:43:47,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 04:44:22] 2025-07-28 08:43:48,107 | INFO     | PID=30213 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 04:44:22] 2025-07-28 08:43:49,533 | INFO     | monitor loop #633: job 0:6748489874 is in state 'finished'
[2025-07-28 04:44:22] 2025-07-28 08:43:49,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 04:44:22] 2025-07-28 08:43:50,026 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 04:44:22] 2025-07-28 08:43:50,030 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-07-28 04:44:22] 2025-07-28 08:43:50,032 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748489874/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 04:44:22] 2025-07-28 08:43:50,033 | INFO     | extracted standard info from prmon json
[2025-07-28 04:44:22] 2025-07-28 08:43:50,033 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 04:44:22] 2025-07-28 08:43:50,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 04:44:22] 2025-07-28 08:43:50,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 04:44:22] 2025-07-28 08:43:50,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 04:44:22] 2025-07-28 08:43:50,038 | INFO     | fitting pss+swap vs Time
[2025-07-28 04:44:22] 2025-07-28 08:43:50,038 | INFO     | sum of square deviations: 850825255.0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,039 | INFO     | sum of deviations: -7941629558.500003
[2025-07-28 04:44:22] 2025-07-28 08:43:50,039 | INFO     | mean x: 1753687931.5
[2025-07-28 04:44:22] 2025-07-28 08:43:50,039 | INFO     | mean y: 2568524.907142857
[2025-07-28 04:44:22] 2025-07-28 08:43:50,039 | INFO     | -- intersect: 16371546562.806507
[2025-07-28 04:44:22] 2025-07-28 08:43:50,039 | INFO     | intersect: 16371546562.806507
[2025-07-28 04:44:22] 2025-07-28 08:43:50,039 | INFO     | chi2: 1.6790575984552234
[2025-07-28 04:44:22] 2025-07-28 08:43:50,040 | INFO     | sum of square deviations: 762879420.0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,040 | INFO     | sum of deviations: -6908634726.999993
[2025-07-28 04:44:22] 2025-07-28 08:43:50,040 | INFO     | mean x: 1753687779.0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,041 | INFO     | mean y: 2570316.837037037
[2025-07-28 04:44:22] 2025-07-28 08:43:50,041 | INFO     | -- intersect: 15883963853.858772
[2025-07-28 04:44:22] 2025-07-28 08:43:50,041 | INFO     | intersect: 15883963853.858772
[2025-07-28 04:44:22] 2025-07-28 08:43:50,041 | INFO     | chi2: 1.6798543824566838
[2025-07-28 04:44:22] 2025-07-28 08:43:50,041 | INFO     | current chi2=1.6798543824566838 (change=-0.04745423874639558 %)
[2025-07-28 04:44:22] 2025-07-28 08:43:50,041 | INFO     | right removable region: 134
[2025-07-28 04:44:22] 2025-07-28 08:43:50,042 | INFO     | sum of square deviations: 762879420.0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,042 | INFO     | sum of deviations: -30120459952.0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,042 | INFO     | mean x: 1753688084.0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,043 | INFO     | mean y: 2606373.6814814815
[2025-07-28 04:44:22] 2025-07-28 08:43:50,043 | INFO     | -- intersect: 69242764539.72772
[2025-07-28 04:44:22] 2025-07-28 08:43:50,043 | INFO     | intersect: 69242764539.72772
[2025-07-28 04:44:22] 2025-07-28 08:43:50,043 | INFO     | chi2: 0.1312946422703928
[2025-07-28 04:44:22] 2025-07-28 08:43:50,043 | INFO     | current chi2=0.1312946422703928 (change=92.1804563231668 %)
[2025-07-28 04:44:22] 2025-07-28 08:43:50,043 | INFO     | sum of square deviations: 681212772.5
[2025-07-28 04:44:22] 2025-07-28 08:43:50,044 | INFO     | sum of deviations: -29421716816.5
[2025-07-28 04:44:22] 2025-07-28 08:43:50,044 | INFO     | mean x: 1753688236.5
[2025-07-28 04:44:22] 2025-07-28 08:43:50,044 | INFO     | mean y: 2604982.9307692307
[2025-07-28 04:44:22] 2025-07-28 08:43:50,044 | INFO     | -- intersect: 75744753048.32143
[2025-07-28 04:44:22] 2025-07-28 08:43:50,045 | INFO     | intersect: 75744753048.32143
[2025-07-28 04:44:22] 2025-07-28 08:43:50,045 | INFO     | chi2: 0.11068066717843184
[2025-07-28 04:44:22] 2025-07-28 08:43:50,045 | INFO     | current chi2=0.11068066717843184 (change=15.700545532930299 %)
[2025-07-28 04:44:22] 2025-07-28 08:43:50,045 | INFO     | left removable region: 20
[2025-07-28 04:44:22] 2025-07-28 08:43:50,045 | INFO     | sum of square deviations: 459366752.5
[2025-07-28 04:44:22] 2025-07-28 08:43:50,046 | INFO     | sum of deviations: -21442100758.500004
[2025-07-28 04:44:22] 2025-07-28 08:43:50,046 | INFO     | mean x: 1753688358.5
[2025-07-28 04:44:22] 2025-07-28 08:43:50,046 | INFO     | mean y: 2595218.00877193
[2025-07-28 04:44:22] 2025-07-28 08:43:50,046 | INFO     | -- intersect: 81860418574.44656
[2025-07-28 04:44:22] 2025-07-28 08:43:50,046 | INFO     | intersect: 81860418574.44656
[2025-07-28 04:44:22] 2025-07-28 08:43:50,047 | INFO     | chi2: 0.10369667201508737
[2025-07-28 04:44:22] 2025-07-28 08:43:50,047 | INFO     | -- intersect: 81860418574.44656
[2025-07-28 04:44:22] 2025-07-28 08:43:50,047 | INFO     | current memory leak: -46.68 B/s (using 114 data points, chi2=0.10)
[2025-07-28 04:44:22] 2025-07-28 08:43:50,047 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-07-28 04:44:22] 2025-07-28 08:43:50,047 | INFO     | ..............................
[2025-07-28 04:44:22] 2025-07-28 08:43:50,048 | INFO     | . Timing measurements:
[2025-07-28 04:44:22] 2025-07-28 08:43:50,048 | INFO     | . get job = 0 s
[2025-07-28 04:44:22] 2025-07-28 08:43:50,048 | INFO     | . initial setup = 2 s
[2025-07-28 04:44:22] 2025-07-28 08:43:50,048 | INFO     | . payload setup = 11 s
[2025-07-28 04:44:22] 2025-07-28 08:43:50,048 | INFO     | . stage-in = 0 s
[2025-07-28 04:44:22] 2025-07-28 08:43:50,048 | INFO     | . payload execution = 8529 s
[2025-07-28 04:44:22] 2025-07-28 08:43:50,048 | INFO     | . stage-out = 0 s
[2025-07-28 04:44:22] 2025-07-28 08:43:50,048 | INFO     | . log creation = 0 s
[2025-07-28 04:44:22] 2025-07-28 08:43:50,048 | INFO     | ..............................
[2025-07-28 04:44:22] 2025-07-28 08:43:50,428 | INFO     | 
[2025-07-28 04:44:22] 2025-07-28 08:43:50,428 | INFO     | job summary report
[2025-07-28 04:44:22] 2025-07-28 08:43:50,429 | INFO     | --------------------------------------------------
[2025-07-28 04:44:22] 2025-07-28 08:43:50,429 | INFO     | PanDA job id: 6748489874
[2025-07-28 04:44:22] 2025-07-28 08:43:50,429 | INFO     | task id: 45743349
[2025-07-28 04:44:22] 2025-07-28 08:43:50,429 | INFO     | errors: (none)
[2025-07-28 04:44:22] 2025-07-28 08:43:50,429 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 04:44:22] 2025-07-28 08:43:50,429 | INFO     | pilot state: finished 
[2025-07-28 04:44:22] 2025-07-28 08:43:50,430 | INFO     | transexitcode: 0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,430 | INFO     | exeerrorcode: 0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,430 | INFO     | exeerrordiag: 
[2025-07-28 04:44:22] 2025-07-28 08:43:50,430 | INFO     | exitcode: 0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,430 | INFO     | exitmsg: OK
[2025-07-28 04:44:22] 2025-07-28 08:43:50,431 | INFO     | cpuconsumptiontime: 63885 s
[2025-07-28 04:44:22] 2025-07-28 08:43:50,431 | INFO     | nevents: 400
[2025-07-28 04:44:22] 2025-07-28 08:43:50,431 | INFO     | neventsw: 0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,431 | INFO     | pid: 5325
[2025-07-28 04:44:22] 2025-07-28 08:43:50,431 | INFO     | pgrp: 5325
[2025-07-28 04:44:22] 2025-07-28 08:43:50,431 | INFO     | corecount: 8
[2025-07-28 04:44:22] 2025-07-28 08:43:50,432 | INFO     | event service: False
[2025-07-28 04:44:22] 2025-07-28 08:43:50,432 | INFO     | sizes: {0: 2397422, 6: 2397684, 11: 2397712, 8544: 2425621, 8546: 2434675, 8555: 2434841}
[2025-07-28 04:44:22] 2025-07-28 08:43:50,432 | INFO     | --------------------------------------------------
[2025-07-28 04:44:22] 2025-07-28 08:43:50,432 | INFO     | 
[2025-07-28 04:44:22] 2025-07-28 08:43:50,432 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 04:44:22] 2025-07-28 08:43:50,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,462 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,462 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,466 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 04:44:22] 2025-07-28 08:43:50,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 04:44:22] 2025-07-28 08:43:50,467 | INFO     | job 6748489874 has completed (purged errors)
[2025-07-28 04:44:22] 2025-07-28 08:43:50,467 | INFO     | overall cleanup function is called
[2025-07-28 04:44:22] 2025-07-28 08:43:51,475 | INFO     | --- collectZombieJob: --- 10, [5325]
[2025-07-28 04:44:22] 2025-07-28 08:43:51,475 | INFO     | zombie collector waiting for pid 5325
[2025-07-28 04:44:22] 2025-07-28 08:43:51,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 04:44:22] 2025-07-28 08:43:51,475 | INFO     | collected zombie processes
[2025-07-28 04:44:22] 2025-07-28 08:43:51,476 | INFO     | will attempt to kill all subprocesses of pid=5325
[2025-07-28 04:44:22] 2025-07-28 08:43:51,563 | INFO     | process IDs to be killed: [5325] (in reverse order)
[2025-07-28 04:44:22] 2025-07-28 08:43:51,623 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 04:44:22] 2025-07-28 08:43:51,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 04:44:22] 2025-07-28 08:43:51,628 | INFO     | did not find any defunct processes belonging to 5325
[2025-07-28 04:44:22] 2025-07-28 08:43:51,630 | INFO     | did not find any defunct processes belonging to 5325
[2025-07-28 04:44:22] 2025-07-28 08:43:51,630 | INFO     | ready for new job
[2025-07-28 04:44:22] 2025-07-28 08:43:51,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 04:44:22] 2025-07-28 08:43:51,632 | INFO     | ***************************************
[2025-07-28 04:44:22] 2025-07-28 08:43:51,632 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 04:44:22] 2025-07-28 08:43:51,632 | INFO     | ***************************************
[2025-07-28 04:44:22] 2025-07-28 08:43:51,633 | INFO     | 
[2025-07-28 04:44:22] 2025-07-28 08:43:51,633 | INFO     | architecture information:
[2025-07-28 04:44:22] 2025-07-28 08:43:51,634 | INFO     | executing command: cat /etc/os-release
[2025-07-28 04:44:22] 2025-07-28 08:43:51,653 | INFO     | cat /etc/os-release:
[2025-07-28 04:44:22] NAME="CentOS Linux"
[2025-07-28 04:44:22] VERSION="7 (Core)"
[2025-07-28 04:44:22] ID="centos"
[2025-07-28 04:44:22] ID_LIKE="rhel fedora"
[2025-07-28 04:44:22] VERSION_ID="7"
[2025-07-28 04:44:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 04:44:22] ANSI_COLOR="0;31"
[2025-07-28 04:44:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 04:44:22] HOME_URL="https://www.centos.org/"
[2025-07-28 04:44:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 04:44:22] 
[2025-07-28 04:44:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 04:44:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 04:44:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 04:44:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 04:44:22] 
[2025-07-28 04:44:22] 2025-07-28 08:43:51,654 | INFO     | ***************************************
[2025-07-28 04:44:22] 2025-07-28 08:43:52,157 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 04:44:22] 2025-07-28 08:43:52,178 | INFO     | sufficient remaining disk space (18735955968 B)
[2025-07-28 04:44:22] 2025-07-28 08:43:52,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 04:44:22] 2025-07-28 08:43:52,179 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 04:44:22] 2025-07-28 08:43:52,179 | INFO     | update_server=False
[2025-07-28 04:44:22] 2025-07-28 08:43:52,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 04:44:22] 2025-07-28 08:43:52,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 04:44:22] 2025-07-28 08:43:52,180 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 04:44:22] 2025-07-28 08:43:52,646 | INFO     | all data control threads have been joined
[2025-07-28 04:44:22] 2025-07-28 08:43:52,813 | INFO     | all job control threads have been joined
[2025-07-28 04:44:22] 2025-07-28 08:43:53,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 04:44:22] 2025-07-28 08:43:53,043 | INFO     | aborting loop
[2025-07-28 04:44:22] 2025-07-28 08:43:53,185 | INFO     | [job] retrieve thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:53,375 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:53,534 | INFO     | all payload control threads have been joined
[2025-07-28 04:44:22] 2025-07-28 08:43:53,607 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:53,650 | INFO     | [data] copytool_in thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:53,652 | INFO     | [data] control thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:53,696 | INFO     | [payload] failed_post thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:53,819 | INFO     | [job] control thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:54,048 | INFO     | [job] job monitor thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:54,186 | INFO     | [data] copytool_out thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:54,263 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:54,393 | INFO     | [job] validate thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:54,403 | INFO     | [payload] validate_post thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:54,502 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:54,539 | INFO     | [payload] control thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:55,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 04:44:22] 2025-07-28 08:43:56,160 | INFO     | [job] queue monitor thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:56,186 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 04:44:22] 2025-07-28 08:43:58,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630034855744)>', '<ExcThread(monitor, started 139629386790656)>']
[2025-07-28 04:44:22] 2025-07-28 08:44:03,309 | INFO     | all workflow threads have been joined
[2025-07-28 04:44:22] 2025-07-28 08:44:03,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 04:44:22] 2025-07-28 08:44:03,318 | INFO     | traces error code: 0
[2025-07-28 04:44:22] 2025-07-28 08:44:03,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 04:44:22] 2025-07-28 08:44:22,330 | INFO     | PID=30213 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 04:44:22] 2025-07-28 08:44:22,331 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 04:44:22] 2025-07-28 08:44:22,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 04:44:22] 2025-07-28 08:44:22,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 04:44:22] 2025-07-28 08:44:22,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 04:44:22] 2025-07-28 08:44:22,331 | INFO     | [monitor] control thread has ended
[2025-07-28 04:44:22] 2025-07-28 08:44:22,452 [wrapper] ==== pilot stdout END ====
[2025-07-28 04:44:22] 2025-07-28 08:44:22,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 04:44:22] 2025-07-28 08:44:22,463 [wrapper] pilotpid: 30213
[2025-07-28 04:44:22] 2025-07-28 08:44:22,468 [wrapper] Pilot exit status: 0
[2025-07-28 04:44:22] 2025-07-28 08:44:22,489 [wrapper] pandaids: 6748489874
[2025-07-28 04:44:22] 2025-07-28 08:44:22,533 [wrapper] cleanup supervisor_pilot 12952 30214
[2025-07-28 04:44:22] 2025-07-28 08:44:22,537 [wrapper] Test setup, not cleaning
[2025-07-28 04:44:22] 2025-07-28 08:44:22,542 [wrapper] apfmon messages muted
[2025-07-28 04:44:22] 2025-07-28 08:44:22,546 [wrapper] ==== wrapper stdout END ====
[2025-07-28 04:44:22] 2025-07-28 08:44:22,551 [wrapper] ==== wrapper stderr END ====
[2025-07-28 04:44:22]  *** Error codes and diagnostics ***
[2025-07-28 04:44:22]     "exeErrorCode": 0,
[2025-07-28 04:44:22]     "exeErrorDiag": "",
[2025-07-28 04:44:22]     "pilotErrorCode": 0,
[2025-07-28 04:44:22]     "pilotErrorDiag": "",
[2025-07-28 04:44:22]  *** Listing of results directory ***
[2025-07-28 04:44:22] total 355640
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas    530466 Jul 28 01:59 pilot3.tar.gz
[2025-07-28 04:44:22] -rwx------ 1 boincer umatlas     36292 Jul 28 02:19 runpilot2-wrapper.sh
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas      5112 Jul 28 02:19 queuedata.json
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas       100 Jul 28 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 04:44:22] -rwxr-xr-x 1 boincer umatlas      7986 Jul 28 02:20 run_atlas
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas       105 Jul 28 02:20 job.xml
[2025-07-28 04:44:22] -rw-r--r-- 2 boincer umatlas 148471638 Jul 28 02:20 EVNT.45743347._000800.pool.root.1
[2025-07-28 04:44:22] drwxrwx--x 2 boincer umatlas      4096 Jul 28 02:20 shared
[2025-07-28 04:44:22] -rw-r--r-- 2 boincer umatlas    542893 Jul 28 02:20 input.tar.gz
[2025-07-28 04:44:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 02:20 start_atlas.sh
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas         0 Jul 28 02:20 boinc_lockfile
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas      2561 Jul 28 02:20 pandaJob.out
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas    978460 Jul 28 02:20 agis_schedconf.cvmfs.json
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas   1593052 Jul 28 02:20 agis_ddmendpoints.agis.ALL.json
[2025-07-28 04:44:22] drwx------ 4 boincer umatlas      4096 Jul 28 02:20 pilot3
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas      5824 Jul 28 04:37 init_data.xml
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas 209603897 Jul 28 04:43 HITS.45743349._056265.pool.root.1
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas       529 Jul 28 04:43 boinc_task_state.xml
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas      1049 Jul 28 04:43 memory_monitor_summary.json
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas    340545 Jul 28 04:43 log.45743349._056265.job.log.tgz.1
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas      7847 Jul 28 04:43 heartbeat.json
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas      8192 Jul 28 04:43 boinc_mmap_file
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas        27 Jul 28 04:43 wrapper_checkpoint.txt
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas        95 Jul 28 04:44 pilot_heartbeat.json
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas       745 Jul 28 04:44 pilotlog.txt
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas    777685 Jul 28 04:44 log.45743349._056265.job.log.1
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas       357 Jul 28 04:44 output.list
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas       620 Jul 28 04:44 runtime_log
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas   1136640 Jul 28 04:44 result.tar.gz
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas      8660 Jul 28 04:44 runtime_log.err
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas       660 Jul 28 04:44 qhTMDmTOW07n9Rq4apOajLDm4fhM0noT9bVof3QYDm6C3KDmmanBcn.diag
[2025-07-28 04:44:22] -rw-r--r-- 1 boincer umatlas     21218 Jul 28 04:44 stderr.txt
[2025-07-28 04:44:22] HITS file was successfully produced:
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas 209603897 Jul 28 04:43 shared/HITS.pool.root.1
[2025-07-28 04:44:22]  *** Contents of shared directory: ***
[2025-07-28 04:44:22] total 351344
[2025-07-28 04:44:22] -rw-r--r-- 2 boincer umatlas 148471638 Jul 28 02:20 ATLAS.root_0
[2025-07-28 04:44:22] -rw-r--r-- 2 boincer umatlas    542893 Jul 28 02:20 input.tar.gz
[2025-07-28 04:44:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 02:20 start_atlas.sh
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas 209603897 Jul 28 04:43 HITS.pool.root.1
[2025-07-28 04:44:22] -rw------- 1 boincer umatlas   1136640 Jul 28 04:44 result.tar.gz
04:44:24 (26528): run_atlas exited; CPU time 63818.303911
04:44:24 (26528): called boinc_finish(0)

</stderr_txt>
]]>

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