Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:01:21 (30931): wrapper (7.7.26015): starting
02:01:21 (30931): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 02:01:21] Arguments: --nthreads 12
[2025-07-28 02:01:21] Threads: 12
[2025-07-28 02:01:21] Checking for CVMFS
[2025-07-28 02:01:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 02:01:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 02:01:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 02:01:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 02:01:21] 2.11.2.0 2918 113055 96148 148837 1 1 14769393 20275200 1 130560 0 39801337 99.972 9677693 10621 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 02:01:21] CVMFS is ok
[2025-07-28 02:01:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 02:01:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 02:01:21] Further information can be found at the LHC@home message board.
[2025-07-28 02:01:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 02:01:21] Checking for apptainer binary...
[2025-07-28 02:01:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 02:01:21] Running /usr/bin/apptainer --version
[2025-07-28 02:01:21] apptainer version 1.3.2-1.el7
[2025-07-28 02:01:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 02:01:23] c-205-12.aglt2.org
[2025-07-28 02:01:23] apptainer works
[2025-07-28 02:01:23] Set ATHENA_PROC_NUMBER=12
[2025-07-28 02:01:23] Set ATHENA_CORE_NUMBER=12
[2025-07-28 02:01:23] Starting ATLAS job with PandaID=6748406682
[2025-07-28 02:01:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 03:27:08]  *** The last 200 lines of the pilot log: ***
[2025-07-28 03:27:08]  mtime=0
[2025-07-28 03:27:08]  protocol_id=None
[2025-07-28 03:27:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 03:27:08]  replicas=None
[2025-07-28 03:27:08]  scope=mc23_13p6TeV
[2025-07-28 03:27:08]  status=None
[2025-07-28 03:27:08]  status_code=0
[2025-07-28 03:27:08]  storage_token=
[2025-07-28 03:27:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748406682/log.45743349._056160.job.log.tgz.1
[2025-07-28 03:27:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/bd/log.45743349._056160.job.log.tgz.1
[2025-07-28 03:27:08]  workdir=None
[2025-07-28 03:27:08] ]
[2025-07-28 03:27:08] 2025-07-28 07:26:25,337 | INFO     | transferring file log.45743349._056160.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748406682/log.45743349._056160.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 03:27:08] 2025-07-28 07:26:25,338 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748406682/log.45743349._056160.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._056160.job
[2025-07-28 03:27:08] 2025-07-28 07:26:25,360 | INFO     | adding to output.list: log.45743349._056160.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/bd/log.45743349._056160.job.log.tg
[2025-07-28 03:27:08] 2025-07-28 07:26:25,361 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 03:27:08] 2025-07-28 07:26:25,361 | INFO     | summary of transferred files:
[2025-07-28 03:27:08] 2025-07-28 07:26:25,361 | INFO     |  -- lfn=log.45743349._056160.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 03:27:08] 2025-07-28 07:26:25,361 | INFO     | stage-out finished correctly
[2025-07-28 03:27:08] 2025-07-28 07:26:26,704 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 03:27:08] 2025-07-28 07:26:29,492 | WARNING  | process 8795 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 03:27:08] 2025-07-28 07:26:29,492 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748406682/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:27:08] 2025-07-28 07:26:29,584 | INFO     | number of running child processes to parent process 8795: 1
[2025-07-28 03:27:08] 2025-07-28 07:26:29,585 | INFO     | maximum number of monitored processes: 6
[2025-07-28 03:27:08] 2025-07-28 07:26:29,676 | INFO     | job 6748406682 has state=finished
[2025-07-28 03:27:08] 2025-07-28 07:26:29,676 | INFO     | preparing for final server update for job 6748406682 in state='finished'
[2025-07-28 03:27:08] 2025-07-28 07:26:29,677 | INFO     | this job has now completed (state=finished)
[2025-07-28 03:27:08] 2025-07-28 07:26:29,677 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 03:27:08] 2025-07-28 07:26:29,677 | INFO     | log transfer has been attempted: DONE
[2025-07-28 03:27:08] 2025-07-28 07:26:29,678 | INFO     | job 6748406682 has finished - writing final server update
[2025-07-28 03:27:08] 2025-07-28 07:26:29,678 | INFO     | total number of processed events: 400 (read)
[2025-07-28 03:27:08] 2025-07-28 07:26:29,679 | INFO     | executing command: lscpu
[2025-07-28 03:27:08] 2025-07-28 07:26:29,705 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 03:27:08] 2025-07-28 07:26:32,088 | INFO     | monitor loop #381: job 0:6748406682 is in state 'finished'
[2025-07-28 03:27:08] 2025-07-28 07:26:32,089 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 03:27:08] 2025-07-28 07:26:34,592 | INFO     | monitor loop #382: job 0:6748406682 is in state 'finished'
[2025-07-28 03:27:08] 2025-07-28 07:26:34,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 03:27:08] 2025-07-28 07:26:35,635 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 03:27:08] 2025-07-28 07:26:35,637 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-28 03:27:08] 2025-07-28 07:26:35,639 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748406682/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:27:08] 2025-07-28 07:26:35,640 | INFO     | extracted standard info from prmon json
[2025-07-28 03:27:08] 2025-07-28 07:26:35,640 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 03:27:08] 2025-07-28 07:26:35,640 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 03:27:08] 2025-07-28 07:26:35,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 03:27:08] 2025-07-28 07:26:35,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 03:27:08] 2025-07-28 07:26:35,643 | INFO     | fitting pss+swap vs Time
[2025-07-28 03:27:08] 2025-07-28 07:26:35,643 | INFO     | sum of square deviations: 136095575.0
[2025-07-28 03:27:08] 2025-07-28 07:26:35,643 | INFO     | sum of deviations: 2572708550.0
[2025-07-28 03:27:08] 2025-07-28 07:26:35,643 | INFO     | mean x: 1753685121.5
[2025-07-28 03:27:08] 2025-07-28 07:26:35,644 | INFO     | mean y: 2683625.8947368423
[2025-07-28 03:27:08] 2025-07-28 07:26:35,644 | INFO     | -- intersect: -33148436137.4836
[2025-07-28 03:27:08] 2025-07-28 07:26:35,644 | INFO     | intersect: -33148436137.4836
[2025-07-28 03:27:08] 2025-07-28 07:26:35,644 | INFO     | chi2: 0.04235882980199327
[2025-07-28 03:27:08] 2025-07-28 07:26:35,644 | INFO     | -- intersect: -33148436137.4836
[2025-07-28 03:27:08] 2025-07-28 07:26:35,644 | INFO     | current memory leak: 18.90 B/s (using 76 data points, chi2=0.04)
[2025-07-28 03:27:08] 2025-07-28 07:26:35,645 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2025-07-28 03:27:08] 2025-07-28 07:26:35,645 | INFO     | ..............................
[2025-07-28 03:27:08] 2025-07-28 07:26:35,645 | INFO     | . Timing measurements:
[2025-07-28 03:27:08] 2025-07-28 07:26:35,645 | INFO     | . get job = 0 s
[2025-07-28 03:27:08] 2025-07-28 07:26:35,645 | INFO     | . initial setup = 2 s
[2025-07-28 03:27:08] 2025-07-28 07:26:35,645 | INFO     | . payload setup = 10 s
[2025-07-28 03:27:08] 2025-07-28 07:26:35,645 | INFO     | . stage-in = 0 s
[2025-07-28 03:27:08] 2025-07-28 07:26:35,645 | INFO     | . payload execution = 5056 s
[2025-07-28 03:27:08] 2025-07-28 07:26:35,645 | INFO     | . stage-out = 0 s
[2025-07-28 03:27:08] 2025-07-28 07:26:35,646 | INFO     | . log creation = 0 s
[2025-07-28 03:27:08] 2025-07-28 07:26:35,646 | INFO     | ..............................
[2025-07-28 03:27:08] 2025-07-28 07:26:35,737 | INFO     | 
[2025-07-28 03:27:08] 2025-07-28 07:26:35,737 | INFO     | job summary report
[2025-07-28 03:27:08] 2025-07-28 07:26:35,738 | INFO     | --------------------------------------------------
[2025-07-28 03:27:08] 2025-07-28 07:26:35,738 | INFO     | PanDA job id: 6748406682
[2025-07-28 03:27:08] 2025-07-28 07:26:35,738 | INFO     | task id: 45743349
[2025-07-28 03:27:08] 2025-07-28 07:26:35,738 | INFO     | errors: (none)
[2025-07-28 03:27:08] 2025-07-28 07:26:35,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 03:27:08] 2025-07-28 07:26:35,738 | INFO     | pilot state: finished 
[2025-07-28 03:27:08] 2025-07-28 07:26:35,739 | INFO     | transexitcode: 0
[2025-07-28 03:27:08] 2025-07-28 07:26:35,739 | INFO     | exeerrorcode: 0
[2025-07-28 03:27:08] 2025-07-28 07:26:35,739 | INFO     | exeerrordiag: 
[2025-07-28 03:27:08] 2025-07-28 07:26:35,739 | INFO     | exitcode: 0
[2025-07-28 03:27:08] 2025-07-28 07:26:35,739 | INFO     | exitmsg: OK
[2025-07-28 03:27:08] 2025-07-28 07:26:35,739 | INFO     | cpuconsumptiontime: 55476 s
[2025-07-28 03:27:08] 2025-07-28 07:26:35,739 | INFO     | nevents: 400
[2025-07-28 03:27:08] 2025-07-28 07:26:35,740 | INFO     | neventsw: 0
[2025-07-28 03:27:08] 2025-07-28 07:26:35,740 | INFO     | pid: 8795
[2025-07-28 03:27:08] 2025-07-28 07:26:35,740 | INFO     | pgrp: 8795
[2025-07-28 03:27:08] 2025-07-28 07:26:35,740 | INFO     | corecount: 12
[2025-07-28 03:27:08] 2025-07-28 07:26:35,740 | INFO     | event service: False
[2025-07-28 03:27:08] 2025-07-28 07:26:35,740 | INFO     | sizes: {0: 2397424, 5: 2397686, 11: 2397742, 5070: 2424044, 5071: 2424043, 5072: 2433097, 5073: 2433281, 5082: 2433475}
[2025-07-28 03:27:08] 2025-07-28 07:26:35,741 | INFO     | --------------------------------------------------
[2025-07-28 03:27:08] 2025-07-28 07:26:35,741 | INFO     | 
[2025-07-28 03:27:08] 2025-07-28 07:26:35,741 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 03:27:08] 2025-07-28 07:26:35,766 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,766 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,769 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 03:27:08] 2025-07-28 07:26:35,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,769 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 03:27:08] 2025-07-28 07:26:35,769 | INFO     | job 6748406682 has completed (purged errors)
[2025-07-28 03:27:08] 2025-07-28 07:26:35,770 | INFO     | overall cleanup function is called
[2025-07-28 03:27:08] 2025-07-28 07:26:36,778 | INFO     | --- collectZombieJob: --- 10, [8795]
[2025-07-28 03:27:08] 2025-07-28 07:26:36,778 | INFO     | zombie collector waiting for pid 8795
[2025-07-28 03:27:08] 2025-07-28 07:26:36,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 03:27:08] 2025-07-28 07:26:36,778 | INFO     | collected zombie processes
[2025-07-28 03:27:08] 2025-07-28 07:26:36,779 | INFO     | will attempt to kill all subprocesses of pid=8795
[2025-07-28 03:27:08] 2025-07-28 07:26:36,867 | INFO     | process IDs to be killed: [8795] (in reverse order)
[2025-07-28 03:27:08] 2025-07-28 07:26:36,915 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 03:27:08] 2025-07-28 07:26:36,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 03:27:08] 2025-07-28 07:26:36,918 | INFO     | did not find any defunct processes belonging to 8795
[2025-07-28 03:27:08] 2025-07-28 07:26:36,920 | INFO     | did not find any defunct processes belonging to 8795
[2025-07-28 03:27:08] 2025-07-28 07:26:36,920 | INFO     | ready for new job
[2025-07-28 03:27:08] 2025-07-28 07:26:36,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 03:27:08] 2025-07-28 07:26:36,922 | INFO     | ***************************************
[2025-07-28 03:27:08] 2025-07-28 07:26:36,922 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 03:27:08] 2025-07-28 07:26:36,922 | INFO     | ***************************************
[2025-07-28 03:27:08] 2025-07-28 07:26:36,922 | INFO     | 
[2025-07-28 03:27:08] 2025-07-28 07:26:36,923 | INFO     | architecture information:
[2025-07-28 03:27:08] 2025-07-28 07:26:36,924 | INFO     | executing command: cat /etc/os-release
[2025-07-28 03:27:08] 2025-07-28 07:26:36,938 | INFO     | cat /etc/os-release:
[2025-07-28 03:27:08] NAME="CentOS Linux"
[2025-07-28 03:27:08] VERSION="7 (Core)"
[2025-07-28 03:27:08] ID="centos"
[2025-07-28 03:27:08] ID_LIKE="rhel fedora"
[2025-07-28 03:27:08] VERSION_ID="7"
[2025-07-28 03:27:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 03:27:08] ANSI_COLOR="0;31"
[2025-07-28 03:27:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 03:27:08] HOME_URL="https://www.centos.org/"
[2025-07-28 03:27:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 03:27:08] 
[2025-07-28 03:27:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 03:27:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 03:27:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 03:27:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 03:27:08] 
[2025-07-28 03:27:08] 2025-07-28 07:26:36,939 | INFO     | ***************************************
[2025-07-28 03:27:08] 2025-07-28 07:26:37,442 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 03:27:08] 2025-07-28 07:26:37,459 | INFO     | sufficient remaining disk space (29426188288 B)
[2025-07-28 03:27:08] 2025-07-28 07:26:37,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 03:27:08] 2025-07-28 07:26:37,460 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 03:27:08] 2025-07-28 07:26:37,460 | INFO     | update_server=False
[2025-07-28 03:27:08] 2025-07-28 07:26:37,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 03:27:08] 2025-07-28 07:26:37,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:27:08] 2025-07-28 07:26:37,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 03:27:08] 2025-07-28 07:26:37,626 | INFO     | all payload control threads have been joined
[2025-07-28 03:27:08] 2025-07-28 07:26:38,092 | INFO     | all job control threads have been joined
[2025-07-28 03:27:08] 2025-07-28 07:26:38,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:27:08] 2025-07-28 07:26:38,101 | INFO     | aborting loop
[2025-07-28 03:27:08] 2025-07-28 07:26:38,195 | INFO     | all data control threads have been joined
[2025-07-28 03:27:08] 2025-07-28 07:26:38,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 03:27:08] 2025-07-28 07:26:38,466 | INFO     | [job] retrieve thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:38,466 | INFO     | [job] queue monitor thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:38,516 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:38,631 | INFO     | [payload] control thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:39,039 | INFO     | [data] copytool_in thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:39,097 | INFO     | [job] control thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:39,106 | INFO     | [job] job monitor thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:39,200 | INFO     | [data] control thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:39,253 | INFO     | [job] validate thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:39,397 | INFO     | [payload] failed_post thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:39,723 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:39,755 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:40,000 | INFO     | [payload] validate_post thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:40,469 | INFO     | [data] copytool_out thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:41,467 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:47,924 | INFO     | job.realtimelogging is not enabled
[2025-07-28 03:27:08] 2025-07-28 07:26:48,930 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 03:27:08] 2025-07-28 07:26:50,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140565335979840)>', '<ExcThread(monitor, started 140564683028224)>']
[2025-07-28 03:27:08] 2025-07-28 07:26:55,607 | INFO     | all workflow threads have been joined
[2025-07-28 03:27:08] 2025-07-28 07:26:55,608 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 03:27:08] 2025-07-28 07:26:55,608 | INFO     | traces error code: 0
[2025-07-28 03:27:08] 2025-07-28 07:26:55,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 03:27:08] 2025-07-28 07:27:08,192 | INFO     | PID=2283 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-28 03:27:08] 2025-07-28 07:27:08,192 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 03:27:08] 2025-07-28 07:27:08,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 03:27:08] 2025-07-28 07:27:08,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 03:27:08] 2025-07-28 07:27:08,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 03:27:08] 2025-07-28 07:27:08,193 | INFO     | [monitor] control thread has ended
[2025-07-28 03:27:08] 2025-07-28 07:27:08,284 [wrapper] ==== pilot stdout END ====
[2025-07-28 03:27:08] 2025-07-28 07:27:08,288 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 03:27:08] 2025-07-28 07:27:08,291 [wrapper] pilotpid: 2283
[2025-07-28 03:27:08] 2025-07-28 07:27:08,295 [wrapper] Pilot exit status: 0
[2025-07-28 03:27:08] 2025-07-28 07:27:08,310 [wrapper] pandaids: 6748406682
[2025-07-28 03:27:08] 2025-07-28 07:27:08,347 [wrapper] cleanup supervisor_pilot 26526 2284
[2025-07-28 03:27:08] 2025-07-28 07:27:08,351 [wrapper] Test setup, not cleaning
[2025-07-28 03:27:08] 2025-07-28 07:27:08,355 [wrapper] apfmon messages muted
[2025-07-28 03:27:08] 2025-07-28 07:27:08,359 [wrapper] ==== wrapper stdout END ====
[2025-07-28 03:27:08] 2025-07-28 07:27:08,363 [wrapper] ==== wrapper stderr END ====
[2025-07-28 03:27:08]  *** Error codes and diagnostics ***
[2025-07-28 03:27:08]     "exeErrorCode": 0,
[2025-07-28 03:27:08]     "exeErrorDiag": "",
[2025-07-28 03:27:08]     "pilotErrorCode": 0,
[2025-07-28 03:27:08]     "pilotErrorDiag": "",
[2025-07-28 03:27:08]  *** Listing of results directory ***
[2025-07-28 03:27:08] total 398468
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 22:44 pilot3.tar.gz
[2025-07-28 03:27:08] -rwx------ 1 boincer umatlas     36292 Jul 27 22:47 runpilot2-wrapper.sh
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 22:47 queuedata.json
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas       100 Jul 28 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 03:27:08] -rwxr-xr-x 1 boincer umatlas      7986 Jul 28 02:01 run_atlas
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas       105 Jul 28 02:01 job.xml
[2025-07-28 03:27:08] -rw-r--r-- 2 boincer umatlas 188100025 Jul 28 02:01 EVNT.45743347._002840.pool.root.1
[2025-07-28 03:27:08] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 02:01 start_atlas.sh
[2025-07-28 03:27:08] drwxrwx--x 2 boincer umatlas      4096 Jul 28 02:01 shared
[2025-07-28 03:27:08] -rw-r--r-- 2 boincer umatlas    542895 Jul 28 02:01 input.tar.gz
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas         0 Jul 28 02:01 boinc_lockfile
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas      2562 Jul 28 02:01 pandaJob.out
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas    980125 Jul 28 02:01 agis_schedconf.cvmfs.json
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas   1593052 Jul 28 02:01 agis_ddmendpoints.agis.ALL.json
[2025-07-28 03:27:08] drwx------ 4 boincer umatlas      4096 Jul 28 02:01 pilot3
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas      5868 Jul 28 03:21 init_data.xml
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas 214379649 Jul 28 03:25 HITS.45743349._056160.pool.root.1
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas      1045 Jul 28 03:26 memory_monitor_summary.json
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas       529 Jul 28 03:26 boinc_task_state.xml
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas    359588 Jul 28 03:26 log.45743349._056160.job.log.tgz.1
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas      7850 Jul 28 03:26 heartbeat.json
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas      8192 Jul 28 03:26 boinc_mmap_file
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas        27 Jul 28 03:26 wrapper_checkpoint.txt
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas        95 Jul 28 03:27 pilot_heartbeat.json
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas       744 Jul 28 03:27 pilotlog.txt
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas    482615 Jul 28 03:27 log.45743349._056160.job.log.1
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas       357 Jul 28 03:27 output.list
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas       620 Jul 28 03:27 runtime_log
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas    860160 Jul 28 03:27 result.tar.gz
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas      8662 Jul 28 03:27 runtime_log.err
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas       660 Jul 28 03:27 A0LKDmZ4S07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKaWLDmJg2Rzm.diag
[2025-07-28 03:27:08] -rw-r--r-- 1 boincer umatlas     21721 Jul 28 03:27 stderr.txt
[2025-07-28 03:27:08] HITS file was successfully produced:
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas 214379649 Jul 28 03:25 shared/HITS.pool.root.1
[2025-07-28 03:27:08]  *** Contents of shared directory: ***
[2025-07-28 03:27:08] total 394440
[2025-07-28 03:27:08] -rw-r--r-- 2 boincer umatlas 188100025 Jul 28 02:01 ATLAS.root_0
[2025-07-28 03:27:08] -rw-r--r-- 2 boincer umatlas     15095 Jul 28 02:01 start_atlas.sh
[2025-07-28 03:27:08] -rw-r--r-- 2 boincer umatlas    542895 Jul 28 02:01 input.tar.gz
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas 214379649 Jul 28 03:25 HITS.pool.root.1
[2025-07-28 03:27:08] -rw------- 1 boincer umatlas    860160 Jul 28 03:27 result.tar.gz
03:27:10 (30931): run_atlas exited; CPU time 55449.344222
03:27:10 (30931): called boinc_finish(0)

</stderr_txt>
]]>

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