Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:01:15 (1162032): wrapper (7.7.26015): starting
02:01:15 (1162032): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 02:01:15] Arguments: --nthreads 12
[2025-07-28 02:01:15] Threads: 12
[2025-07-28 02:01:15] Checking for CVMFS
[2025-07-28 02:01:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 02:01:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 02:01:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 02:01:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 02:01:16] 2.12.6.0 3255183 19777 413464 148837 3 65 23227022 32935936 8563 16776704 1 73806241 99.563 96316704 17254 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 02:01:16] CVMFS is ok
[2025-07-28 02:01:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 02:01:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 02:01:16] Further information can be found at the LHC@home message board.
[2025-07-28 02:01:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 02:01:16] Checking for apptainer binary...
[2025-07-28 02:01:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 02:01:16] Running /usr/bin/apptainer --version
[2025-07-28 02:01:16] apptainer version 1.4.1-1.el9
[2025-07-28 02:01:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 02:01:16] c6-1-24-1.aglt2.org
[2025-07-28 02:01:16] apptainer works
[2025-07-28 02:01:16] Set ATHENA_PROC_NUMBER=12
[2025-07-28 02:01:16] Set ATHENA_CORE_NUMBER=12
[2025-07-28 02:01:16] Starting ATLAS job with PandaID=6748388170
[2025-07-28 02:01:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 03:11:24]  *** The last 200 lines of the pilot log: ***
[2025-07-28 03:11:24] 2025-07-28 07:10:40,926 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 03:11:24] 2025-07-28 07:10:40,926 | INFO     | summary of transferred files:
[2025-07-28 03:11:24] 2025-07-28 07:10:40,926 | INFO     |  -- lfn=log.45743349._056120.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 03:11:24] 2025-07-28 07:10:40,926 | INFO     | stage-out finished correctly
[2025-07-28 03:11:24] 2025-07-28 07:10:41,096 | WARNING  | process 1174356 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 03:11:24] 2025-07-28 07:10:41,097 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748388170/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:11:24] 2025-07-28 07:10:41,098 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748388170/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:11:24] 2025-07-28 07:10:41,100 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4078351 B
[2025-07-28 03:11:24] 2025-07-28 07:10:41,100 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15783 B
[2025-07-28 03:11:24] 2025-07-28 07:10:41,101 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 03:11:24] 2025-07-28 07:10:41,118 | INFO     | sufficient remaining disk space (76533465088 B)
[2025-07-28 03:11:24] 2025-07-28 07:10:41,118 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-28 03:11:24] 2025-07-28 07:10:41,119 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6748388170: 4373725 B (within 2537553920 B limit)
[2025-07-28 03:11:24] 2025-07-28 07:10:41,120 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6748388170/HITS.45743349._056120.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-28 03:11:24] 2025-07-28 07:10:41,120 | INFO     | total size of present files: 0 B (workdir size: 4373725 B)
[2025-07-28 03:11:24] 2025-07-28 07:10:41,120 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6748388170/HITS.45743349._056120.pool.root.1 since it does not exist
[2025-07-28 03:11:24] 2025-07-28 07:10:41,420 | INFO     | number of running child processes to parent process 1174356: 1
[2025-07-28 03:11:24] 2025-07-28 07:10:41,420 | INFO     | maximum number of monitored processes: 6
[2025-07-28 03:11:24] 2025-07-28 07:10:43,519 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 03:11:24] 2025-07-28 07:10:43,923 | INFO     | monitor loop #310: job 0:6748388170 is in state 'finished'
[2025-07-28 03:11:24] 2025-07-28 07:10:43,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 03:11:24] 2025-07-28 07:10:45,542 | INFO     | PID=1166320 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 03:11:24] 2025-07-28 07:10:45,543 | INFO     | .. there are 15 such processes running
[2025-07-28 03:11:24] 2025-07-28 07:10:45,889 | INFO     | job 6748388170 has state=finished
[2025-07-28 03:11:24] 2025-07-28 07:10:45,889 | INFO     | preparing for final server update for job 6748388170 in state='finished'
[2025-07-28 03:11:24] 2025-07-28 07:10:45,890 | INFO     | this job has now completed (state=finished)
[2025-07-28 03:11:24] 2025-07-28 07:10:45,890 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 03:11:24] 2025-07-28 07:10:45,891 | INFO     | log transfer has been attempted: DONE
[2025-07-28 03:11:24] 2025-07-28 07:10:45,891 | INFO     | job 6748388170 has finished - writing final server update
[2025-07-28 03:11:24] 2025-07-28 07:10:45,892 | INFO     | total number of processed events: 400 (read)
[2025-07-28 03:11:24] 2025-07-28 07:10:45,893 | INFO     | executing command: lscpu
[2025-07-28 03:11:24] 2025-07-28 07:10:45,946 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 03:11:24] 2025-07-28 07:10:46,426 | INFO     | monitor loop #311: job 0:6748388170 is in state 'finished'
[2025-07-28 03:11:24] 2025-07-28 07:10:46,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 03:11:24] 2025-07-28 07:10:48,929 | INFO     | monitor loop #312: job 0:6748388170 is in state 'finished'
[2025-07-28 03:11:24] 2025-07-28 07:10:48,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 03:11:24] 2025-07-28 07:10:50,719 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 03:11:24] 2025-07-28 07:10:50,722 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2829.2689285714287
[2025-07-28 03:11:24] 2025-07-28 07:10:50,741 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748388170/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:11:24] 2025-07-28 07:10:50,741 | INFO     | extracted standard info from prmon json
[2025-07-28 03:11:24] 2025-07-28 07:10:50,741 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 03:11:24] 2025-07-28 07:10:50,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 03:11:24] 2025-07-28 07:10:50,742 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 03:11:24] 2025-07-28 07:10:50,742 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 03:11:24] 2025-07-28 07:10:50,743 | INFO     | fitting pss+swap vs Time
[2025-07-28 03:11:24] 2025-07-28 07:10:50,744 | INFO     | sum of square deviations: 70364110.0
[2025-07-28 03:11:24] 2025-07-28 07:10:50,744 | INFO     | sum of deviations: 1564100817.0000002
[2025-07-28 03:11:24] 2025-07-28 07:10:50,744 | INFO     | mean x: 1753684653.0
[2025-07-28 03:11:24] 2025-07-28 07:10:50,744 | INFO     | mean y: 2404197.8524590163
[2025-07-28 03:11:24] 2025-07-28 07:10:50,744 | INFO     | -- intersect: -38979679118.736946
[2025-07-28 03:11:24] 2025-07-28 07:10:50,744 | INFO     | intersect: -38979679118.736946
[2025-07-28 03:11:24] 2025-07-28 07:10:50,744 | INFO     | chi2: 0.06826509941771995
[2025-07-28 03:11:24] 2025-07-28 07:10:50,744 | INFO     | -- intersect: -38979679118.736946
[2025-07-28 03:11:24] 2025-07-28 07:10:50,744 | INFO     | current memory leak: 22.23 B/s (using 61 data points, chi2=0.07)
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | could have reported an average CPU frequency of 2788 MHz (6 samples)
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | ..............................
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | . Timing measurements:
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | . get job = 0 s
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | . initial setup = 2 s
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | . payload setup = 8 s
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | . stage-in = 0 s
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | . payload execution = 4122 s
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | . stage-out = 0 s
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | . log creation = 0 s
[2025-07-28 03:11:24] 2025-07-28 07:10:50,745 | INFO     | ..............................
[2025-07-28 03:11:24] 2025-07-28 07:10:50,808 | INFO     | 
[2025-07-28 03:11:24] 2025-07-28 07:10:50,808 | INFO     | job summary report
[2025-07-28 03:11:24] 2025-07-28 07:10:50,808 | INFO     | --------------------------------------------------
[2025-07-28 03:11:24] 2025-07-28 07:10:50,808 | INFO     | PanDA job id: 6748388170
[2025-07-28 03:11:24] 2025-07-28 07:10:50,808 | INFO     | task id: 45743349
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | errors: (none)
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | pilot state: finished 
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | transexitcode: 0
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | exeerrorcode: 0
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | exeerrordiag: 
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | exitcode: 0
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | exitmsg: OK
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | cpuconsumptiontime: 44190 s
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | nevents: 400
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | neventsw: 0
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | pid: 1174356
[2025-07-28 03:11:24] 2025-07-28 07:10:50,809 | INFO     | pgrp: 1174356
[2025-07-28 03:11:24] 2025-07-28 07:10:50,810 | INFO     | corecount: 12
[2025-07-28 03:11:24] 2025-07-28 07:10:50,810 | INFO     | event service: False
[2025-07-28 03:11:24] 2025-07-28 07:10:50,810 | INFO     | sizes: {0: 2397483, 5: 2397745, 11: 2397801, 4134: 2423612, 4136: 2432610, 4139: 2432694, 4146: 2433016}
[2025-07-28 03:11:24] 2025-07-28 07:10:50,810 | INFO     | --------------------------------------------------
[2025-07-28 03:11:24] 2025-07-28 07:10:50,810 | INFO     | 
[2025-07-28 03:11:24] 2025-07-28 07:10:50,810 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 03:11:24] 2025-07-28 07:10:50,831 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,832 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,833 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 03:11:24] 2025-07-28 07:10:50,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,833 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 03:11:24] 2025-07-28 07:10:50,833 | INFO     | job 6748388170 has completed (purged errors)
[2025-07-28 03:11:24] 2025-07-28 07:10:50,833 | INFO     | overall cleanup function is called
[2025-07-28 03:11:24] 2025-07-28 07:10:51,841 | INFO     | --- collectZombieJob: --- 10, [1174356]
[2025-07-28 03:11:24] 2025-07-28 07:10:51,842 | INFO     | zombie collector waiting for pid 1174356
[2025-07-28 03:11:24] 2025-07-28 07:10:51,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 03:11:24] 2025-07-28 07:10:51,842 | INFO     | collected zombie processes
[2025-07-28 03:11:24] 2025-07-28 07:10:51,842 | INFO     | will attempt to kill all subprocesses of pid=1174356
[2025-07-28 03:11:24] 2025-07-28 07:10:52,091 | INFO     | process IDs to be killed: [1174356] (in reverse order)
[2025-07-28 03:11:24] 2025-07-28 07:10:52,195 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 03:11:24] 2025-07-28 07:10:52,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 03:11:24] 2025-07-28 07:10:52,206 | INFO     | did not find any defunct processes belonging to 1174356
[2025-07-28 03:11:24] 2025-07-28 07:10:52,217 | INFO     | did not find any defunct processes belonging to 1174356
[2025-07-28 03:11:24] 2025-07-28 07:10:52,217 | INFO     | ready for new job
[2025-07-28 03:11:24] 2025-07-28 07:10:52,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 03:11:24] 2025-07-28 07:10:52,219 | INFO     | ***************************************
[2025-07-28 03:11:24] 2025-07-28 07:10:52,220 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 03:11:24] 2025-07-28 07:10:52,220 | INFO     | ***************************************
[2025-07-28 03:11:24] 2025-07-28 07:10:52,220 | INFO     | 
[2025-07-28 03:11:24] 2025-07-28 07:10:52,236 | INFO     | architecture information:
[2025-07-28 03:11:24] 2025-07-28 07:10:52,236 | INFO     | executing command: cat /etc/os-release
[2025-07-28 03:11:24] 2025-07-28 07:10:52,252 | INFO     | cat /etc/os-release:
[2025-07-28 03:11:24] NAME="CentOS Linux"
[2025-07-28 03:11:24] VERSION="7 (Core)"
[2025-07-28 03:11:24] ID="centos"
[2025-07-28 03:11:24] ID_LIKE="rhel fedora"
[2025-07-28 03:11:24] VERSION_ID="7"
[2025-07-28 03:11:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 03:11:24] ANSI_COLOR="0;31"
[2025-07-28 03:11:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 03:11:24] HOME_URL="https://www.centos.org/"
[2025-07-28 03:11:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 03:11:24] 
[2025-07-28 03:11:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 03:11:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 03:11:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 03:11:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 03:11:24] 
[2025-07-28 03:11:24] 2025-07-28 07:10:52,252 | INFO     | ***************************************
[2025-07-28 03:11:24] 2025-07-28 07:10:52,754 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 03:11:24] 2025-07-28 07:10:52,772 | INFO     | sufficient remaining disk space (76538707968 B)
[2025-07-28 03:11:24] 2025-07-28 07:10:52,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 03:11:24] 2025-07-28 07:10:52,773 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 03:11:24] 2025-07-28 07:10:52,773 | INFO     | update_server=False
[2025-07-28 03:11:24] 2025-07-28 07:10:52,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 03:11:24] 2025-07-28 07:10:52,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:11:24] 2025-07-28 07:10:52,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:11:24] 2025-07-28 07:10:52,774 | INFO     | aborting loop
[2025-07-28 03:11:24] 2025-07-28 07:10:53,102 | INFO     | all job control threads have been joined
[2025-07-28 03:11:24] 2025-07-28 07:10:53,646 | INFO     | all data control threads have been joined
[2025-07-28 03:11:24] 2025-07-28 07:10:53,778 | INFO     | [job] retrieve thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:53,779 | INFO     | [job] job monitor thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:53,779 | INFO     | [job] queue monitor thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:54,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 03:11:24] 2025-07-28 07:10:54,019 | INFO     | [payload] failed_post thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:54,038 | INFO     | all payload control threads have been joined
[2025-07-28 03:11:24] 2025-07-28 07:10:54,107 | INFO     | [job] control thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:54,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 03:11:24] 2025-07-28 07:10:54,366 | INFO     | [job] validate thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:54,567 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:54,569 | INFO     | [payload] validate_post thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:54,611 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:54,651 | INFO     | [data] control thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:54,905 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:55,001 | INFO     | [data] copytool_in thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:55,044 | INFO     | [payload] control thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:56,016 | INFO     | [data] copytool_out thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:10:58,117 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:11:02,947 | INFO     | job.realtimelogging is not enabled
[2025-07-28 03:11:24] 2025-07-28 07:11:03,952 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 03:11:24] 2025-07-28 07:11:05,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336667375424)>', '<ExcThread(monitor, started 140336034735872)>']
[2025-07-28 03:11:24] 2025-07-28 07:11:10,919 | INFO     | all workflow threads have been joined
[2025-07-28 03:11:24] 2025-07-28 07:11:10,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 03:11:24] 2025-07-28 07:11:10,920 | INFO     | traces error code: 0
[2025-07-28 03:11:24] 2025-07-28 07:11:10,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 03:11:24] 2025-07-28 07:11:23,954 | INFO     | PID=1166320 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 03:11:24] 2025-07-28 07:11:23,954 | INFO     | .. there are 15 such processes running
[2025-07-28 03:11:24] 2025-07-28 07:11:23,955 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 03:11:24] 2025-07-28 07:11:23,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 03:11:24] 2025-07-28 07:11:23,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 03:11:24] 2025-07-28 07:11:23,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 03:11:24] 2025-07-28 07:11:23,955 | INFO     | [monitor] control thread has ended
[2025-07-28 03:11:24] 2025-07-28 07:11:24,162 [wrapper] ==== pilot stdout END ====
[2025-07-28 03:11:24] 2025-07-28 07:11:24,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 03:11:24] 2025-07-28 07:11:24,167 [wrapper] pilotpid: 1166320
[2025-07-28 03:11:24] 2025-07-28 07:11:24,171 [wrapper] Pilot exit status: 0
[2025-07-28 03:11:24] 2025-07-28 07:11:24,182 [wrapper] pandaids: 6748388170
[2025-07-28 03:11:24] 2025-07-28 07:11:24,246 [wrapper] cleanup supervisor_pilot 1559782 1166321
[2025-07-28 03:11:24] 2025-07-28 07:11:24,250 [wrapper] Test setup, not cleaning
[2025-07-28 03:11:24] 2025-07-28 07:11:24,254 [wrapper] apfmon messages muted
[2025-07-28 03:11:24] 2025-07-28 07:11:24,257 [wrapper] ==== wrapper stdout END ====
[2025-07-28 03:11:24] 2025-07-28 07:11:24,259 [wrapper] ==== wrapper stderr END ====
[2025-07-28 03:11:24]  *** Error codes and diagnostics ***
[2025-07-28 03:11:24]     "exeErrorCode": 0,
[2025-07-28 03:11:24]     "exeErrorDiag": "",
[2025-07-28 03:11:24]     "pilotErrorCode": 0,
[2025-07-28 03:11:24]     "pilotErrorDiag": "",
[2025-07-28 03:11:24]  *** Listing of results directory ***
[2025-07-28 03:11:24] total 347820
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 21:42 pilot3.tar.gz
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 21:46 queuedata.json
[2025-07-28 03:11:24] -rwx------. 1 boincer umatlas     36292 Jul 27 21:46 runpilot2-wrapper.sh
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas       100 Jul 28 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 03:11:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 02:01 run_atlas
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas       105 Jul 28 02:01 job.xml
[2025-07-28 03:11:24] -rw-r--r--. 2 boincer umatlas 146511387 Jul 28 02:01 EVNT.45743347._003003.pool.root.1
[2025-07-28 03:11:24] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 02:01 shared
[2025-07-28 03:11:24] -rw-r--r--. 2 boincer umatlas    542893 Jul 28 02:01 input.tar.gz
[2025-07-28 03:11:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 02:01 start_atlas.sh
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas         0 Jul 28 02:01 boinc_lockfile
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas      2571 Jul 28 02:01 pandaJob.out
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas    980125 Jul 28 02:01 agis_schedconf.cvmfs.json
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas   1593052 Jul 28 02:01 agis_ddmendpoints.agis.ALL.json
[2025-07-28 03:11:24] drwx------. 4 boincer umatlas      4096 Jul 28 02:01 pilot3
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas      6842 Jul 28 03:09 init_data.xml
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas 204214875 Jul 28 03:10 HITS.45743349._056120.pool.root.1
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas       529 Jul 28 03:10 boinc_task_state.xml
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas      1038 Jul 28 03:10 memory_monitor_summary.json
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas    359217 Jul 28 03:10 log.45743349._056120.job.log.tgz.1
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas      7824 Jul 28 03:10 heartbeat.json
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas        27 Jul 28 03:10 wrapper_checkpoint.txt
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 03:10 boinc_mmap_file
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas       823 Jul 28 03:11 pilotlog.txt
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas        95 Jul 28 03:11 pilot_heartbeat.json
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas    422353 Jul 28 03:11 log.45743349._056120.job.log.1
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas       357 Jul 28 03:11 output.list
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas       620 Jul 28 03:11 runtime_log
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas    798720 Jul 28 03:11 result.tar.gz
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas       655 Jul 28 03:11 ZDKLDms7R07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzXWLDmdZYypn.diag
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 03:11 runtime_log.err
[2025-07-28 03:11:24] -rw-r--r--. 1 boincer umatlas     22556 Jul 28 03:11 stderr.txt
[2025-07-28 03:11:24] HITS file was successfully produced:
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas 204214875 Jul 28 03:10 shared/HITS.pool.root.1
[2025-07-28 03:11:24]  *** Contents of shared directory: ***
[2025-07-28 03:11:24] total 343848
[2025-07-28 03:11:24] -rw-r--r--. 2 boincer umatlas 146511387 Jul 28 02:01 ATLAS.root_0
[2025-07-28 03:11:24] -rw-r--r--. 2 boincer umatlas    542893 Jul 28 02:01 input.tar.gz
[2025-07-28 03:11:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 02:01 start_atlas.sh
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas 204214875 Jul 28 03:10 HITS.pool.root.1
[2025-07-28 03:11:24] -rw-------. 1 boincer umatlas    798720 Jul 28 03:11 result.tar.gz
03:11:25 (1162032): run_atlas exited; CPU time 44266.385288
03:11:25 (1162032): called boinc_finish(0)

</stderr_txt>
]]>

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