Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:42:48 (1724079): wrapper (7.7.26015): starting
01:42:48 (1724079): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 01:42:48] Arguments: --nthreads 8
[2025-07-28 01:42:48] Threads: 8
[2025-07-28 01:42:48] Checking for CVMFS
[2025-07-28 01:42:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 01:42:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 01:42:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 01:42:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 01:42:49] 2.13.0.0 108345 19399 355380 148837 0 78 32600326 32935937 14659 16776704 0 52817211 99.622 72461843 20771 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 01:42:49] CVMFS is ok
[2025-07-28 01:42:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 01:42:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 01:42:49] Further information can be found at the LHC@home message board.
[2025-07-28 01:42:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 01:42:49] Checking for apptainer binary...
[2025-07-28 01:42:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 01:42:49] Running /usr/bin/apptainer --version
[2025-07-28 01:42:49] apptainer version 1.4.1-1.el9
[2025-07-28 01:42:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 01:42:49] c6-8-25-2.aglt2.org
[2025-07-28 01:42:49] apptainer works
[2025-07-28 01:42:49] Set ATHENA_PROC_NUMBER=8
[2025-07-28 01:42:49] Set ATHENA_CORE_NUMBER=8
[2025-07-28 01:42:49] Starting ATLAS job with PandaID=6747413881
[2025-07-28 01:42:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 03:36:57]  *** The last 200 lines of the pilot log: ***
[2025-07-28 03:36:57] 2025-07-28 07:36:19,767 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 03:36:57] 2025-07-28 07:36:22,022 | INFO     | 6800s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-28 03:36:57] 2025-07-28 07:36:22,122 | INFO     | monitor loop #495: job 0:6747413881 is in state 'finished'
[2025-07-28 03:36:57] 2025-07-28 07:36:22,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 03:36:57] 2025-07-28 07:36:24,020 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 03:36:57] 2025-07-28 07:36:24,044 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2779.6096666666667
[2025-07-28 03:36:57] 2025-07-28 07:36:24,061 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747413881/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:36:57] 2025-07-28 07:36:24,062 | INFO     | extracted standard info from prmon json
[2025-07-28 03:36:57] 2025-07-28 07:36:24,062 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 03:36:57] 2025-07-28 07:36:24,062 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 03:36:57] 2025-07-28 07:36:24,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 03:36:57] 2025-07-28 07:36:24,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 03:36:57] 2025-07-28 07:36:24,065 | INFO     | fitting pss+swap vs Time
[2025-07-28 03:36:57] 2025-07-28 07:36:24,066 | INFO     | sum of square deviations: 424045160.0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,066 | INFO     | sum of deviations: 4943460862.000002
[2025-07-28 03:36:57] 2025-07-28 07:36:24,066 | INFO     | mean x: 1753684775.0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,066 | INFO     | mean y: 2218654.5675675673
[2025-07-28 03:36:57] 2025-07-28 07:36:24,066 | INFO     | -- intersect: -20442000186.41102
[2025-07-28 03:36:57] 2025-07-28 07:36:24,066 | INFO     | intersect: -20442000186.41102
[2025-07-28 03:36:57] 2025-07-28 07:36:24,067 | INFO     | chi2: 1.7532674917137574
[2025-07-28 03:36:57] 2025-07-28 07:36:24,067 | INFO     | sum of square deviations: 369281342.5
[2025-07-28 03:36:57] 2025-07-28 07:36:24,067 | INFO     | sum of deviations: 5277169230.999997
[2025-07-28 03:36:57] 2025-07-28 07:36:24,068 | INFO     | mean x: 1753684622.5
[2025-07-28 03:36:57] 2025-07-28 07:36:24,068 | INFO     | mean y: 2219559.396226415
[2025-07-28 03:36:57] 2025-07-28 07:36:24,068 | INFO     | -- intersect: -25058593066.77875
[2025-07-28 03:36:57] 2025-07-28 07:36:24,068 | INFO     | intersect: -25058593066.77875
[2025-07-28 03:36:57] 2025-07-28 07:36:24,068 | INFO     | chi2: 1.7568433822109517
[2025-07-28 03:36:57] 2025-07-28 07:36:24,068 | INFO     | current chi2=1.7568433822109517 (change=-0.20395578621599858 %)
[2025-07-28 03:36:57] 2025-07-28 07:36:24,068 | INFO     | right removable region: 105
[2025-07-28 03:36:57] 2025-07-28 07:36:24,068 | INFO     | sum of square deviations: 369281342.5
[2025-07-28 03:36:57] 2025-07-28 07:36:24,069 | INFO     | sum of deviations: -10789914850.000002
[2025-07-28 03:36:57] 2025-07-28 07:36:24,069 | INFO     | mean x: 1753684927.5
[2025-07-28 03:36:57] 2025-07-28 07:36:24,069 | INFO     | mean y: 2261677.7735849055
[2025-07-28 03:36:57] 2025-07-28 07:36:24,069 | INFO     | -- intersect: 51242627392.84739
[2025-07-28 03:36:57] 2025-07-28 07:36:24,069 | INFO     | intersect: 51242627392.84739
[2025-07-28 03:36:57] 2025-07-28 07:36:24,069 | INFO     | chi2: 0.20464937954193776
[2025-07-28 03:36:57] 2025-07-28 07:36:24,070 | INFO     | current chi2=0.20464937954193776 (change=88.32754382835788 %)
[2025-07-28 03:36:57] 2025-07-28 07:36:24,070 | INFO     | sum of square deviations: 319447850.0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,070 | INFO     | sum of deviations: -8788771237.0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,070 | INFO     | mean x: 1753685080.0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,070 | INFO     | mean y: 2255346.128712871
[2025-07-28 03:36:57] 2025-07-28 07:36:24,070 | INFO     | -- intersect: 48250308948.180016
[2025-07-28 03:36:57] 2025-07-28 07:36:24,070 | INFO     | intersect: 48250308948.180016
[2025-07-28 03:36:57] 2025-07-28 07:36:24,071 | INFO     | chi2: 0.16878538398390688
[2025-07-28 03:36:57] 2025-07-28 07:36:24,071 | INFO     | current chi2=0.16878538398390688 (change=17.52460507737892 %)
[2025-07-28 03:36:57] 2025-07-28 07:36:24,071 | INFO     | left removable region: 20
[2025-07-28 03:36:57] 2025-07-28 07:36:24,071 | INFO     | sum of square deviations: 190403570.0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,071 | INFO     | sum of deviations: 1009015212.9999999
[2025-07-28 03:36:57] 2025-07-28 07:36:24,071 | INFO     | mean x: 1753685202.0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,072 | INFO     | mean y: 2223198.882352941
[2025-07-28 03:36:57] 2025-07-28 07:36:24,072 | INFO     | -- intersect: -9291168976.647642
[2025-07-28 03:36:57] 2025-07-28 07:36:24,072 | INFO     | intersect: -9291168976.647642
[2025-07-28 03:36:57] 2025-07-28 07:36:24,072 | INFO     | chi2: 0.015037006378206806
[2025-07-28 03:36:57] 2025-07-28 07:36:24,072 | INFO     | -- intersect: -9291168976.647642
[2025-07-28 03:36:57] 2025-07-28 07:36:24,072 | INFO     | current memory leak: 5.30 B/s (using 85 data points, chi2=0.02)
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | could have reported an average CPU frequency of 2644 MHz (7 samples)
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | ..............................
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | . Timing measurements:
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | . get job = 0 s
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | . initial setup = 3 s
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | . payload setup = 10 s
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | . stage-in = 0 s
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | . payload execution = 6759 s
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | . stage-out = 0 s
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | . log creation = 0 s
[2025-07-28 03:36:57] 2025-07-28 07:36:24,073 | INFO     | ..............................
[2025-07-28 03:36:57] 2025-07-28 07:36:24,163 | INFO     | 
[2025-07-28 03:36:57] 2025-07-28 07:36:24,163 | INFO     | job summary report
[2025-07-28 03:36:57] 2025-07-28 07:36:24,163 | INFO     | --------------------------------------------------
[2025-07-28 03:36:57] 2025-07-28 07:36:24,163 | INFO     | PanDA job id: 6747413881
[2025-07-28 03:36:57] 2025-07-28 07:36:24,163 | INFO     | task id: 45743349
[2025-07-28 03:36:57] 2025-07-28 07:36:24,163 | INFO     | errors: (none)
[2025-07-28 03:36:57] 2025-07-28 07:36:24,163 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 03:36:57] 2025-07-28 07:36:24,163 | INFO     | pilot state: finished 
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | transexitcode: 0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | exeerrorcode: 0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | exeerrordiag: 
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | exitcode: 0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | exitmsg: OK
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | cpuconsumptiontime: 49975 s
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | nevents: 400
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | neventsw: 0
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | pid: 1735013
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | pgrp: 1735013
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | corecount: 8
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | event service: False
[2025-07-28 03:36:57] 2025-07-28 07:36:24,164 | INFO     | sizes: {0: 2397475, 7: 2397737, 11: 2397765, 6773: 2424792, 6774: 2424791, 6776: 2433845, 6777: 2434029, 6781: 2434223}
[2025-07-28 03:36:57] 2025-07-28 07:36:24,165 | INFO     | --------------------------------------------------
[2025-07-28 03:36:57] 2025-07-28 07:36:24,165 | INFO     | 
[2025-07-28 03:36:57] 2025-07-28 07:36:24,165 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-28 03:36:57] 2025-07-28 07:36:24,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,184 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,184 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 03:36:57] 2025-07-28 07:36:24,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,184 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 03:36:57] 2025-07-28 07:36:24,184 | INFO     | job 6747413881 has completed (purged errors)
[2025-07-28 03:36:57] 2025-07-28 07:36:24,184 | INFO     | overall cleanup function is called
[2025-07-28 03:36:57] 2025-07-28 07:36:25,192 | INFO     | --- collectZombieJob: --- 10, [1735013]
[2025-07-28 03:36:57] 2025-07-28 07:36:25,192 | INFO     | zombie collector waiting for pid 1735013
[2025-07-28 03:36:57] 2025-07-28 07:36:25,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 03:36:57] 2025-07-28 07:36:25,192 | INFO     | collected zombie processes
[2025-07-28 03:36:57] 2025-07-28 07:36:25,192 | INFO     | will attempt to kill all subprocesses of pid=1735013
[2025-07-28 03:36:57] 2025-07-28 07:36:25,515 | INFO     | process IDs to be killed: [1735013] (in reverse order)
[2025-07-28 03:36:57] 2025-07-28 07:36:25,652 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 03:36:57] 2025-07-28 07:36:25,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 03:36:57] 2025-07-28 07:36:25,666 | INFO     | did not find any defunct processes belonging to 1735013
[2025-07-28 03:36:57] 2025-07-28 07:36:25,680 | INFO     | did not find any defunct processes belonging to 1735013
[2025-07-28 03:36:57] 2025-07-28 07:36:25,680 | INFO     | ready for new job
[2025-07-28 03:36:57] 2025-07-28 07:36:25,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 03:36:57] 2025-07-28 07:36:25,681 | INFO     | ***************************************
[2025-07-28 03:36:57] 2025-07-28 07:36:25,682 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 03:36:57] 2025-07-28 07:36:25,682 | INFO     | ***************************************
[2025-07-28 03:36:57] 2025-07-28 07:36:25,682 | INFO     | 
[2025-07-28 03:36:57] 2025-07-28 07:36:25,699 | INFO     | architecture information:
[2025-07-28 03:36:57] 2025-07-28 07:36:25,700 | INFO     | executing command: cat /etc/os-release
[2025-07-28 03:36:57] 2025-07-28 07:36:25,715 | INFO     | cat /etc/os-release:
[2025-07-28 03:36:57] NAME="CentOS Linux"
[2025-07-28 03:36:57] VERSION="7 (Core)"
[2025-07-28 03:36:57] ID="centos"
[2025-07-28 03:36:57] ID_LIKE="rhel fedora"
[2025-07-28 03:36:57] VERSION_ID="7"
[2025-07-28 03:36:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 03:36:57] ANSI_COLOR="0;31"
[2025-07-28 03:36:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 03:36:57] HOME_URL="https://www.centos.org/"
[2025-07-28 03:36:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 03:36:57] 
[2025-07-28 03:36:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 03:36:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 03:36:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 03:36:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 03:36:57] 
[2025-07-28 03:36:57] 2025-07-28 07:36:25,715 | INFO     | ***************************************
[2025-07-28 03:36:57] 2025-07-28 07:36:26,217 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-28 03:36:57] 2025-07-28 07:36:26,235 | INFO     | sufficient remaining disk space (76200017920 B)
[2025-07-28 03:36:57] 2025-07-28 07:36:26,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 03:36:57] 2025-07-28 07:36:26,236 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 03:36:57] 2025-07-28 07:36:26,236 | INFO     | update_server=False
[2025-07-28 03:36:57] 2025-07-28 07:36:26,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 03:36:57] 2025-07-28 07:36:26,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:36:57] 2025-07-28 07:36:26,236 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 03:36:57] 2025-07-28 07:36:26,237 | INFO     | aborting loop
[2025-07-28 03:36:57] 2025-07-28 07:36:26,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 03:36:57] 2025-07-28 07:36:26,843 | INFO     | all payload control threads have been joined
[2025-07-28 03:36:57] 2025-07-28 07:36:26,860 | INFO     | all data control threads have been joined
[2025-07-28 03:36:57] 2025-07-28 07:36:27,241 | INFO     | [job] retrieve thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:27,242 | INFO     | [job] job monitor thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:27,512 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:27,564 | INFO     | all job control threads have been joined
[2025-07-28 03:36:57] 2025-07-28 07:36:27,776 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:27,848 | INFO     | [payload] control thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:27,865 | INFO     | [data] control thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:27,873 | INFO     | [data] copytool_in thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:28,069 | INFO     | [payload] failed_post thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:28,229 | INFO     | [job] validate thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:28,449 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:28,567 | INFO     | [data] copytool_out thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:28,569 | INFO     | [job] control thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:28,667 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:28,714 | INFO     | [payload] validate_post thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:29,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:36:57] 2025-07-28 07:36:30,178 | INFO     | [job] queue monitor thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:30,242 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 03:36:57] 2025-07-28 07:36:32,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140215248348992)>', '<ExcThread(monitor, started 140214592837376)>']
[2025-07-28 03:36:57] 2025-07-28 07:36:37,094 | INFO     | all workflow threads have been joined
[2025-07-28 03:36:57] 2025-07-28 07:36:37,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 03:36:57] 2025-07-28 07:36:37,094 | INFO     | traces error code: 0
[2025-07-28 03:36:57] 2025-07-28 07:36:37,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 03:36:57] 2025-07-28 07:36:57,587 | INFO     | PID=1728135 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 03:36:57] 2025-07-28 07:36:57,588 | INFO     | .. there are 20 such processes running
[2025-07-28 03:36:57] 2025-07-28 07:36:57,588 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 03:36:57] 2025-07-28 07:36:57,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 03:36:57] 2025-07-28 07:36:57,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 03:36:57] 2025-07-28 07:36:57,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 03:36:57] 2025-07-28 07:36:57,589 | INFO     | [monitor] control thread has ended
[2025-07-28 03:36:57] 2025-07-28 07:36:57,770 [wrapper] ==== pilot stdout END ====
[2025-07-28 03:36:57] 2025-07-28 07:36:57,774 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 03:36:57] 2025-07-28 07:36:57,777 [wrapper] pilotpid: 1728135
[2025-07-28 03:36:57] 2025-07-28 07:36:57,781 [wrapper] Pilot exit status: 0
[2025-07-28 03:36:57] 2025-07-28 07:36:57,794 [wrapper] pandaids: 6747413881
[2025-07-28 03:36:57] 2025-07-28 07:36:57,870 [wrapper] cleanup supervisor_pilot 2116265 1728136
[2025-07-28 03:36:57] 2025-07-28 07:36:57,873 [wrapper] Test setup, not cleaning
[2025-07-28 03:36:57] 2025-07-28 07:36:57,877 [wrapper] apfmon messages muted
[2025-07-28 03:36:57] 2025-07-28 07:36:57,881 [wrapper] ==== wrapper stdout END ====
[2025-07-28 03:36:57] 2025-07-28 07:36:57,884 [wrapper] ==== wrapper stderr END ====
[2025-07-28 03:36:57]  *** Error codes and diagnostics ***
[2025-07-28 03:36:57]     "exeErrorCode": 0,
[2025-07-28 03:36:57]     "exeErrorDiag": "",
[2025-07-28 03:36:57]     "pilotErrorCode": 0,
[2025-07-28 03:36:57]     "pilotErrorDiag": "",
[2025-07-28 03:36:57]  *** Listing of results directory ***
[2025-07-28 03:36:57] total 439152
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:41 pilot3.tar.gz
[2025-07-28 03:36:57] -rwx------. 1 boincer umatlas     36292 Jul 27 10:52 runpilot2-wrapper.sh
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:52 queuedata.json
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas       100 Jul 28 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 03:36:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 01:42 run_atlas
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas       105 Jul 28 01:42 job.xml
[2025-07-28 03:36:57] -rw-r--r--. 2 boincer umatlas 229365345 Jul 28 01:42 EVNT.45743347._002801.pool.root.1
[2025-07-28 03:36:57] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 01:42 start_atlas.sh
[2025-07-28 03:36:57] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 01:42 shared
[2025-07-28 03:36:57] -rw-r--r--. 2 boincer umatlas    542894 Jul 28 01:42 input.tar.gz
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas         0 Jul 28 01:42 boinc_lockfile
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas      2563 Jul 28 01:42 pandaJob.out
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas    980125 Jul 28 01:43 agis_schedconf.cvmfs.json
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas   1593052 Jul 28 01:43 agis_ddmendpoints.agis.ALL.json
[2025-07-28 03:36:57] drwx------. 4 boincer umatlas      4096 Jul 28 01:43 pilot3
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas      6855 Jul 28 03:28 init_data.xml
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas 214492618 Jul 28 03:35 HITS.45743349._050307.pool.root.1
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas       530 Jul 28 03:35 boinc_task_state.xml
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas      1042 Jul 28 03:36 memory_monitor_summary.json
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas    333372 Jul 28 03:36 log.45743349._050307.job.log.tgz.1
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas        95 Jul 28 03:36 pilot_heartbeat.json
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas      7822 Jul 28 03:36 heartbeat.json
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 03:36 boinc_mmap_file
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas        27 Jul 28 03:36 wrapper_checkpoint.txt
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas       823 Jul 28 03:36 pilotlog.txt
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas    645445 Jul 28 03:36 log.45743349._050307.job.log.1
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas       357 Jul 28 03:36 output.list
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas       620 Jul 28 03:36 runtime_log
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas    993280 Jul 28 03:36 result.tar.gz
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas      8665 Jul 28 03:36 runtime_log.err
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas       654 Jul 28 03:36 D7oLDmguH07n9Rq4apOajLDm4fhM0noT9bVof3QYDmUh2KDmZ16apm.diag
[2025-07-28 03:36:57] -rw-r--r--. 1 boincer umatlas     21291 Jul 28 03:36 stderr.txt
[2025-07-28 03:36:57] HITS file was successfully produced:
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas 214492618 Jul 28 03:35 shared/HITS.pool.root.1
[2025-07-28 03:36:57]  *** Contents of shared directory: ***
[2025-07-28 03:36:57] total 434988
[2025-07-28 03:36:57] -rw-r--r--. 2 boincer umatlas 229365345 Jul 28 01:42 ATLAS.root_0
[2025-07-28 03:36:57] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 01:42 start_atlas.sh
[2025-07-28 03:36:57] -rw-r--r--. 2 boincer umatlas    542894 Jul 28 01:42 input.tar.gz
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas 214492618 Jul 28 03:35 HITS.pool.root.1
[2025-07-28 03:36:57] -rw-------. 1 boincer umatlas    993280 Jul 28 03:36 result.tar.gz
03:36:59 (1724079): run_atlas exited; CPU time 50252.020861
03:36:59 (1724079): called boinc_finish(0)

</stderr_txt>
]]>

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