Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
03:01:35 (272577): wrapper (7.7.26015): starting
03:01:35 (272577): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 03:01:35] Arguments: --nthreads 4
[2025-07-28 03:01:35] Threads: 4
[2025-07-28 03:01:35] Checking for CVMFS
[2025-07-28 03:01:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 03:01:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 03:01:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 03:01:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 03:01:35] 2.13.1.0 3792798 395 50056 148839 0 57 3254151 4096000 6454 130560 0 1870853 99.999 13126 2236 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.174:3128 1
[2025-07-28 03:01:35] CVMFS is ok
[2025-07-28 03:01:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 03:01:35] Checking for apptainer binary...
[2025-07-28 03:01:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 03:01:35] Running /usr/bin/apptainer --version
[2025-07-28 03:01:35] apptainer version 1.4.1
[2025-07-28 03:01:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 03:01:35] X-32-ubuntu
[2025-07-28 03:01:35] apptainer works
[2025-07-28 03:01:35] Set ATHENA_PROC_NUMBER=4
[2025-07-28 03:01:35] Set ATHENA_CORE_NUMBER=4
[2025-07-28 03:01:35] Starting ATLAS job with PandaID=6746137234
[2025-07-28 03:01:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 04:18:18]  *** The last 200 lines of the pilot log: ***
[2025-07-28 04:18:18]  is_altstaged=None
[2025-07-28 04:18:18]  is_tar=False
[2025-07-28 04:18:18]  lfn=log.45758383._000052.job.log.tgz.1
[2025-07-28 04:18:18]  mtime=0
[2025-07-28 04:18:18]  protocol_id=None
[2025-07-28 04:18:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 04:18:18]  replicas=None
[2025-07-28 04:18:18]  scope=mc23_13p6TeV
[2025-07-28 04:18:18]  status=None
[2025-07-28 04:18:18]  status_code=0
[2025-07-28 04:18:18]  storage_token=
[2025-07-28 04:18:18]  surl=/var/lib/boinc/slots/4/PanDA_Pilot-6746137234/log.45758383._000052.job.log.tgz.1
[2025-07-28 04:18:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/3f/log.45758383._000052.job.log.tgz.1
[2025-07-28 04:18:18]  workdir=None
[2025-07-28 04:18:18] ]
[2025-07-28 04:18:18] 2025-07-28 08:17:42,979 | INFO     | transferring file log.45758383._000052.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-6746137234/log.45758383._000052.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 04:18:18] 2025-07-28 08:17:42,980 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-6746137234/log.45758383._000052.job.log.tgz.1 /var/lib/boinc/slots/4/log.45758383._000052.job
[2025-07-28 04:18:18] 2025-07-28 08:17:42,994 | INFO     | adding to output.list: log.45758383._000052.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/3f/log.45758383._000052.job.log.tg
[2025-07-28 04:18:18] 2025-07-28 08:17:42,994 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 04:18:18] 2025-07-28 08:17:42,994 | INFO     | summary of transferred files:
[2025-07-28 04:18:18] 2025-07-28 08:17:42,994 | INFO     |  -- lfn=log.45758383._000052.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 04:18:18] 2025-07-28 08:17:42,994 | INFO     | stage-out finished correctly
[2025-07-28 04:18:18] 2025-07-28 08:17:43,035 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 04:18:18] 2025-07-28 08:17:43,731 | INFO     | job 6746137234 has state=finished
[2025-07-28 04:18:18] 2025-07-28 08:17:43,731 | INFO     | preparing for final server update for job 6746137234 in state='finished'
[2025-07-28 04:18:18] 2025-07-28 08:17:43,732 | INFO     | this job has now completed (state=finished)
[2025-07-28 04:18:18] 2025-07-28 08:17:43,732 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 04:18:18] 2025-07-28 08:17:43,732 | INFO     | log transfer has been attempted: DONE
[2025-07-28 04:18:18] 2025-07-28 08:17:43,732 | INFO     | job 6746137234 has finished - writing final server update
[2025-07-28 04:18:18] 2025-07-28 08:17:43,732 | INFO     | total number of processed events: 400 (read)
[2025-07-28 04:18:18] 2025-07-28 08:17:43,733 | INFO     | executing command: lscpu
[2025-07-28 04:18:18] 2025-07-28 08:17:43,761 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 04:18:18] 2025-07-28 08:17:46,267 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 04:18:18] 2025-07-28 08:17:46,273 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2930.8069062500003
[2025-07-28 04:18:18] 2025-07-28 08:17:46,277 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6746137234/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 04:18:18] 2025-07-28 08:17:46,279 | INFO     | extracted standard info from prmon json
[2025-07-28 04:18:18] 2025-07-28 08:17:46,279 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 04:18:18] 2025-07-28 08:17:46,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 04:18:18] 2025-07-28 08:17:46,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 04:18:18] 2025-07-28 08:17:46,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 04:18:18] 2025-07-28 08:17:46,280 | INFO     | fitting pss+swap vs Time
[2025-07-28 04:18:18] 2025-07-28 08:17:46,280 | INFO     | sum of square deviations: 97479037.0
[2025-07-28 04:18:18] 2025-07-28 08:17:46,280 | INFO     | sum of deviations: -6029651353.5
[2025-07-28 04:18:18] 2025-07-28 08:17:46,280 | INFO     | mean x: 1753688473.5
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | mean y: 2428797.0147058824
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | -- intersect: 108478367863.3457
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | intersect: 108478367863.3457
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | chi2: 0.13898395752811304
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | -- intersect: 108478367863.3457
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | current memory leak: -61.86 B/s (using 68 data points, chi2=0.14)
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | could have reported an average CPU frequency of 3619 MHz (6 samples)
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | ..............................
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | . Timing measurements:
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | . get job = 0 s
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | . initial setup = 2 s
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | . payload setup = 4 s
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | . stage-in = 0 s
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | . payload execution = 4537 s
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | . stage-out = 0 s
[2025-07-28 04:18:18] 2025-07-28 08:17:46,281 | INFO     | . log creation = 0 s
[2025-07-28 04:18:18] 2025-07-28 08:17:46,282 | INFO     | ..............................
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | 
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | job summary report
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | --------------------------------------------------
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | PanDA job id: 6746137234
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | task id: 45758383
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | errors: (none)
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | pilot state: finished 
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | transexitcode: 0
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | exeerrorcode: 0
[2025-07-28 04:18:18] 2025-07-28 08:17:46,326 | INFO     | exeerrordiag: 
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | exitcode: 0
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | exitmsg: OK
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | cpuconsumptiontime: 17353 s
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | nevents: 400
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | neventsw: 0
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | pid: 283040
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | pgrp: 283040
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | corecount: 4
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | event service: False
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | sizes: {0: 2397457, 3: 2397719, 11: 2397747, 4546: 2433005, 4550: 2433143}
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | --------------------------------------------------
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | 
[2025-07-28 04:18:18] 2025-07-28 08:17:46,327 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-28 04:18:18] 2025-07-28 08:17:46,341 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,342 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,342 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | job 6746137234 has completed (purged errors)
[2025-07-28 04:18:18] 2025-07-28 08:17:46,343 | INFO     | overall cleanup function is called
[2025-07-28 04:18:18] 2025-07-28 08:17:46,364 | WARNING  | process 283040 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 04:18:18] 2025-07-28 08:17:46,431 | INFO     | using path: /var/lib/boinc/slots/4/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 04:18:18] 2025-07-28 08:17:46,491 | INFO     | number of running child processes to parent process 283040: 1
[2025-07-28 04:18:18] 2025-07-28 08:17:46,491 | INFO     | maximum number of monitored processes: 6
[2025-07-28 04:18:18] 2025-07-28 08:17:46,491 | INFO     | aborting job monitoring since job object (job id=6746137234) has expired
[2025-07-28 04:18:18] 2025-07-28 08:17:47,351 | INFO     | --- collectZombieJob: --- 10, [283040]
[2025-07-28 04:18:18] 2025-07-28 08:17:47,351 | INFO     | zombie collector waiting for pid 283040
[2025-07-28 04:18:18] 2025-07-28 08:17:47,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 04:18:18] 2025-07-28 08:17:47,351 | INFO     | collected zombie processes
[2025-07-28 04:18:18] 2025-07-28 08:17:47,351 | INFO     | will attempt to kill all subprocesses of pid=283040
[2025-07-28 04:18:18] 2025-07-28 08:17:47,422 | INFO     | process IDs to be killed: [283040] (in reverse order)
[2025-07-28 04:18:18] 2025-07-28 08:17:47,468 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 04:18:18] 2025-07-28 08:17:47,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 04:18:18] 2025-07-28 08:17:47,470 | INFO     | did not find any defunct processes belonging to 283040
[2025-07-28 04:18:18] 2025-07-28 08:17:47,471 | INFO     | did not find any defunct processes belonging to 283040
[2025-07-28 04:18:18] 2025-07-28 08:17:47,471 | INFO     | ready for new job
[2025-07-28 04:18:18] 2025-07-28 08:17:47,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 04:18:18] 2025-07-28 08:17:47,472 | INFO     | ***************************************
[2025-07-28 04:18:18] 2025-07-28 08:17:47,472 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 04:18:18] 2025-07-28 08:17:47,472 | INFO     | ***************************************
[2025-07-28 04:18:18] 2025-07-28 08:17:47,472 | INFO     | 
[2025-07-28 04:18:18] 2025-07-28 08:17:47,473 | INFO     | architecture information:
[2025-07-28 04:18:18] 2025-07-28 08:17:47,473 | INFO     | executing command: cat /etc/os-release
[2025-07-28 04:18:18] 2025-07-28 08:17:47,482 | INFO     | cat /etc/os-release:
[2025-07-28 04:18:18] NAME="CentOS Linux"
[2025-07-28 04:18:18] VERSION="7 (Core)"
[2025-07-28 04:18:18] ID="centos"
[2025-07-28 04:18:18] ID_LIKE="rhel fedora"
[2025-07-28 04:18:18] VERSION_ID="7"
[2025-07-28 04:18:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 04:18:18] ANSI_COLOR="0;31"
[2025-07-28 04:18:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 04:18:18] HOME_URL="https://www.centos.org/"
[2025-07-28 04:18:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 04:18:18] 
[2025-07-28 04:18:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 04:18:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 04:18:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 04:18:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 04:18:18] 
[2025-07-28 04:18:18] 2025-07-28 08:17:47,482 | INFO     | ***************************************
[2025-07-28 04:18:18] 2025-07-28 08:17:47,985 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-28 04:18:18] 2025-07-28 08:17:47,996 | INFO     | sufficient remaining disk space (1823656116224 B)
[2025-07-28 04:18:18] 2025-07-28 08:17:47,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 04:18:18] 2025-07-28 08:17:47,996 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 04:18:18] 2025-07-28 08:17:47,997 | INFO     | update_server=False
[2025-07-28 04:18:18] 2025-07-28 08:17:47,997 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 04:18:18] 2025-07-28 08:17:47,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 04:18:18] 2025-07-28 08:17:47,997 | INFO     | aborting loop
[2025-07-28 04:18:18] 2025-07-28 08:17:47,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 04:18:18] 2025-07-28 08:17:48,085 | INFO     | all data control threads have been joined
[2025-07-28 04:18:18] 2025-07-28 08:17:48,177 | INFO     | all job control threads have been joined
[2025-07-28 04:18:18] 2025-07-28 08:17:48,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 04:18:18] 2025-07-28 08:17:49,002 | INFO     | [job] retrieve thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:49,002 | INFO     | [job] job monitor thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:49,003 | INFO     | [job] queue monitor thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:49,091 | INFO     | [data] control thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:49,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 04:18:18] 2025-07-28 08:17:49,182 | INFO     | [job] control thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:49,290 | INFO     | all payload control threads have been joined
[2025-07-28 04:18:18] 2025-07-28 08:17:49,417 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:49,463 | INFO     | [job] validate thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:49,485 | INFO     | [payload] failed_post thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:49,613 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:49,821 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:49,907 | INFO     | [data] copytool_in thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:50,053 | INFO     | [payload] validate_post thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:50,296 | INFO     | [payload] control thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:50,550 | INFO     | [data] copytool_out thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:53,103 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:58,417 | INFO     | job.realtimelogging is not enabled
[2025-07-28 04:18:18] 2025-07-28 08:17:59,422 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 04:18:18] 2025-07-28 08:17:59,911 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137966695237440)>', '<ExcThread(monitor, started 137966202636032)>']
[2025-07-28 04:18:18] 2025-07-28 08:18:04,912 | INFO     | all workflow threads have been joined
[2025-07-28 04:18:18] 2025-07-28 08:18:04,912 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 04:18:18] 2025-07-28 08:18:04,913 | INFO     | traces error code: 0
[2025-07-28 04:18:18] 2025-07-28 08:18:04,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 04:18:18] 2025-07-28 08:18:18,683 | INFO     | PID=276343 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 04:18:18] 2025-07-28 08:18:18,684 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 04:18:18] 2025-07-28 08:18:18,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 04:18:18] 2025-07-28 08:18:18,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 04:18:18] 2025-07-28 08:18:18,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 04:18:18] 2025-07-28 08:18:18,684 | INFO     | [monitor] control thread has ended
[2025-07-28 04:18:18] 2025-07-28 08:18:18,748 [wrapper] ==== pilot stdout END ====
[2025-07-28 04:18:18] 2025-07-28 08:18:18,751 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 04:18:18] 2025-07-28 08:18:18,753 [wrapper] pilotpid: 276343
[2025-07-28 04:18:18] 2025-07-28 08:18:18,755 [wrapper] Pilot exit status: 0
[2025-07-28 04:18:18] 2025-07-28 08:18:18,761 [wrapper] pandaids: 6746137234
[2025-07-28 04:18:18] 2025-07-28 08:18:18,789 [wrapper] cleanup supervisor_pilot  315862 276344
[2025-07-28 04:18:18] 2025-07-28 08:18:18,791 [wrapper] Test setup, not cleaning
[2025-07-28 04:18:18] 2025-07-28 08:18:18,793 [wrapper] apfmon messages muted
[2025-07-28 04:18:18] 2025-07-28 08:18:18,795 [wrapper] ==== wrapper stdout END ====
[2025-07-28 04:18:18] 2025-07-28 08:18:18,797 [wrapper] ==== wrapper stderr END ====
[2025-07-28 04:18:18]  *** Error codes and diagnostics ***
[2025-07-28 04:18:18]     "exeErrorCode": 0,
[2025-07-28 04:18:18]     "exeErrorDiag": "",
[2025-07-28 04:18:18]     "pilotErrorCode": 0,
[2025-07-28 04:18:18]     "pilotErrorDiag": "",
[2025-07-28 04:18:18]  *** Listing of results directory ***
[2025-07-28 04:18:18] total 411832
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc    530466 Jul 27 01:42 pilot3.tar.gz
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc      5112 Jul 27 01:44 queuedata.json
[2025-07-28 04:18:18] -rwx------ 1 boinc boinc     36292 Jul 27 01:44 runpilot2-wrapper.sh
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc       100 Jul 28 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 04:18:18] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 03:01 run_atlas
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc       105 Jul 28 03:01 job.xml
[2025-07-28 04:18:18] -rw-r--r-- 2 boinc boinc    542879 Jul 28 03:01 input.tar.gz
[2025-07-28 04:18:18] -rw-r--r-- 2 boinc boinc 242085591 Jul 28 03:01 EVNT.45758381._000003.pool.root.1
[2025-07-28 04:18:18] -rw-r--r-- 2 boinc boinc     15095 Jul 28 03:01 start_atlas.sh
[2025-07-28 04:18:18] drwxrwx--x 2 boinc boinc      4096 Jul 28 03:01 shared
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc      9728 Jul 28 03:01 init_data.xml
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc         0 Jul 28 03:01 boinc_setup_complete
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc         0 Jul 28 03:01 boinc_lockfile
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc      2551 Jul 28 03:01 pandaJob.out
[2025-07-28 04:18:18] -rw------- 1 boinc boinc    978460 Jul 28 03:01 agis_schedconf.cvmfs.json
[2025-07-28 04:18:18] -rw------- 1 boinc boinc   1593052 Jul 28 03:01 agis_ddmendpoints.agis.ALL.json
[2025-07-28 04:18:18] drwx------ 4 boinc boinc      4096 Jul 28 03:01 pilot3
[2025-07-28 04:18:18] -rw------- 1 boinc boinc 174400450 Jul 28 04:17 HITS.45758383._000052.pool.root.1
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc       529 Jul 28 04:17 boinc_task_state.xml
[2025-07-28 04:18:18] -rw------- 1 boinc boinc      1023 Jul 28 04:17 memory_monitor_summary.json
[2025-07-28 04:18:18] -rw------- 1 boinc boinc    228770 Jul 28 04:17 log.45758383._000052.job.log.tgz.1
[2025-07-28 04:18:18] -rw------- 1 boinc boinc      7728 Jul 28 04:17 heartbeat.json
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc        27 Jul 28 04:17 wrapper_checkpoint.txt
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc      8192 Jul 28 04:17 boinc_mmap_file
[2025-07-28 04:18:18] -rw------- 1 boinc boinc       746 Jul 28 04:18 pilotlog.txt
[2025-07-28 04:18:18] -rw------- 1 boinc boinc        95 Jul 28 04:18 pilot_heartbeat.json
[2025-07-28 04:18:18] -rw------- 1 boinc boinc    450411 Jul 28 04:18 log.45758383._000052.job.log.1
[2025-07-28 04:18:18] -rw------- 1 boinc boinc       357 Jul 28 04:18 output.list
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc       620 Jul 28 04:18 runtime_log
[2025-07-28 04:18:18] -rw------- 1 boinc boinc    696320 Jul 28 04:18 result.tar.gz
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc      8628 Jul 28 04:18 runtime_log.err
[2025-07-28 04:18:18] -rw------- 1 boinc boinc       643 Jul 28 04:18 lojNDmzM9z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsOULDmnqQzSo.diag
[2025-07-28 04:18:18] -rw-r--r-- 1 boinc boinc     21117 Jul 28 04:18 stderr.txt
[2025-07-28 04:18:18] HITS file was successfully produced:
[2025-07-28 04:18:18] -rw------- 1 boinc boinc 174400450 Jul 28 04:17 shared/HITS.pool.root.1
[2025-07-28 04:18:18]  *** Contents of shared directory: ***
[2025-07-28 04:18:18] total 407964
[2025-07-28 04:18:18] -rw-r--r-- 2 boinc boinc    542879 Jul 28 03:01 input.tar.gz
[2025-07-28 04:18:18] -rw-r--r-- 2 boinc boinc 242085591 Jul 28 03:01 ATLAS.root_0
[2025-07-28 04:18:18] -rw-r--r-- 2 boinc boinc     15095 Jul 28 03:01 start_atlas.sh
[2025-07-28 04:18:18] -rw------- 1 boinc boinc 174400450 Jul 28 04:17 HITS.pool.root.1
[2025-07-28 04:18:18] -rw------- 1 boinc boinc    696320 Jul 28 04:18 result.tar.gz
04:18:20 (272577): run_atlas exited; CPU time 17376.700728
04:18:20 (272577): called boinc_finish(0)

</stderr_txt>
]]>

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