Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:38:26 (493068): wrapper (7.7.26015): starting
03:38:26 (493068): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 03:38:26] Arguments: --nthreads 12
[2025-07-28 03:38:26] Threads: 12
[2025-07-28 03:38:26] Checking for CVMFS
[2025-07-28 03:38:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 03:38:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 03:38:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 03:38:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 03:38:27] 2.12.6.0 240040 19514 308948 148840 1 189 18168546 32935937 11583 16776704 1 61498260 99.750 60770723 11185 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 03:38:27] CVMFS is ok
[2025-07-28 03:38:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 03:38:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 03:38:27] Further information can be found at the LHC@home message board.
[2025-07-28 03:38:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 03:38:27] Checking for apptainer binary...
[2025-07-28 03:38:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 03:38:27] Running /usr/bin/apptainer --version
[2025-07-28 03:38:35] apptainer version 1.4.1-1.el9
[2025-07-28 03:38:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 03:38:35] c6-1-24-2.aglt2.org
[2025-07-28 03:38:35] apptainer works
[2025-07-28 03:38:35] Set ATHENA_PROC_NUMBER=12
[2025-07-28 03:38:35] Set ATHENA_CORE_NUMBER=12
[2025-07-28 03:38:35] Starting ATLAS job with PandaID=6748457527
[2025-07-28 03:38:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 04:47:35]  *** The last 200 lines of the pilot log: ***
[2025-07-28 04:47:35]  scope=mc23_13p6TeV
[2025-07-28 04:47:35]  status=None
[2025-07-28 04:47:35]  status_code=0
[2025-07-28 04:47:35]  storage_token=
[2025-07-28 04:47:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748457527/log.45743349._056239.job.log.tgz.1
[2025-07-28 04:47:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/19/log.45743349._056239.job.log.tgz.1
[2025-07-28 04:47:35]  workdir=None
[2025-07-28 04:47:35] ]
[2025-07-28 04:47:35] 2025-07-28 08:46:53,194 | INFO     | transferring file log.45743349._056239.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748457527/log.45743349._056239.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 04:47:35] 2025-07-28 08:46:53,195 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748457527/log.45743349._056239.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._056239.job
[2025-07-28 04:47:35] 2025-07-28 08:46:53,214 | INFO     | adding to output.list: log.45743349._056239.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/19/log.45743349._056239.job.log.tg
[2025-07-28 04:47:35] 2025-07-28 08:46:53,215 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 04:47:35] 2025-07-28 08:46:53,216 | INFO     | summary of transferred files:
[2025-07-28 04:47:35] 2025-07-28 08:46:53,216 | INFO     |  -- lfn=log.45743349._056239.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 04:47:35] 2025-07-28 08:46:53,216 | INFO     | stage-out finished correctly
[2025-07-28 04:47:35] 2025-07-28 08:46:54,698 | WARNING  | process 508177 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 04:47:35] 2025-07-28 08:46:54,698 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748457527/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 04:47:35] 2025-07-28 08:46:55,008 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 04:47:35] 2025-07-28 08:46:55,097 | INFO     | number of running child processes to parent process 508177: 1
[2025-07-28 04:47:35] 2025-07-28 08:46:55,097 | INFO     | maximum number of monitored processes: 6
[2025-07-28 04:47:35] 2025-07-28 08:46:56,208 | INFO     | PID=498132 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 04:47:35] 2025-07-28 08:46:56,208 | INFO     | .. there are 15 such processes running
[2025-07-28 04:47:35] 2025-07-28 08:46:57,541 | INFO     | job 6748457527 has state=finished
[2025-07-28 04:47:35] 2025-07-28 08:46:57,541 | INFO     | preparing for final server update for job 6748457527 in state='finished'
[2025-07-28 04:47:35] 2025-07-28 08:46:57,542 | INFO     | this job has now completed (state=finished)
[2025-07-28 04:47:35] 2025-07-28 08:46:57,542 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 04:47:35] 2025-07-28 08:46:57,542 | INFO     | log transfer has been attempted: DONE
[2025-07-28 04:47:35] 2025-07-28 08:46:57,542 | INFO     | job 6748457527 has finished - writing final server update
[2025-07-28 04:47:35] 2025-07-28 08:46:57,542 | INFO     | total number of processed events: 400 (read)
[2025-07-28 04:47:35] 2025-07-28 08:46:57,543 | INFO     | executing command: lscpu
[2025-07-28 04:47:35] 2025-07-28 08:46:57,596 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 04:47:35] 2025-07-28 08:46:57,601 | INFO     | monitor loop #296: job 0:6748457527 is in state 'finished'
[2025-07-28 04:47:35] 2025-07-28 08:46:57,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 04:47:35] 2025-07-28 08:46:59,214 | INFO     | 4096s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-28 04:47:35] 2025-07-28 08:47:00,104 | INFO     | monitor loop #297: job 0:6748457527 is in state 'finished'
[2025-07-28 04:47:35] 2025-07-28 08:47:00,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 04:47:35] 2025-07-28 08:47:01,362 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 04:47:35] 2025-07-28 08:47:01,365 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2842.0776250000004
[2025-07-28 04:47:35] 2025-07-28 08:47:01,370 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748457527/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 04:47:35] 2025-07-28 08:47:01,371 | INFO     | extracted standard info from prmon json
[2025-07-28 04:47:35] 2025-07-28 08:47:01,371 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 04:47:35] 2025-07-28 08:47:01,371 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 04:47:35] 2025-07-28 08:47:01,371 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 04:47:35] 2025-07-28 08:47:01,371 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 04:47:35] 2025-07-28 08:47:01,372 | INFO     | fitting pss+swap vs Time
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | sum of square deviations: 66954951.65000001
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | sum of deviations: -10373418595.95
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | mean x: 1753690455.65
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | mean y: 2599318.05
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | -- intersect: 271704164861.33176
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | intersect: 271704164861.33176
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | chi2: 0.12410667490784001
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | -- intersect: 271704164861.33176
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | current memory leak: -154.93 B/s (using 60 data points, chi2=0.12)
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | could have reported an average CPU frequency of 2818 MHz (6 samples)
[2025-07-28 04:47:35] 2025-07-28 08:47:01,373 | INFO     | ..............................
[2025-07-28 04:47:35] 2025-07-28 08:47:01,374 | INFO     | . Timing measurements:
[2025-07-28 04:47:35] 2025-07-28 08:47:01,374 | INFO     | . get job = 0 s
[2025-07-28 04:47:35] 2025-07-28 08:47:01,374 | INFO     | . initial setup = 2 s
[2025-07-28 04:47:35] 2025-07-28 08:47:01,374 | INFO     | . payload setup = 6 s
[2025-07-28 04:47:35] 2025-07-28 08:47:01,374 | INFO     | . stage-in = 0 s
[2025-07-28 04:47:35] 2025-07-28 08:47:01,374 | INFO     | . payload execution = 4061 s
[2025-07-28 04:47:35] 2025-07-28 08:47:01,374 | INFO     | . stage-out = 0 s
[2025-07-28 04:47:35] 2025-07-28 08:47:01,374 | INFO     | . log creation = 0 s
[2025-07-28 04:47:35] 2025-07-28 08:47:01,374 | INFO     | ..............................
[2025-07-28 04:47:35] 2025-07-28 08:47:01,577 | INFO     | 
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | job summary report
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | --------------------------------------------------
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | PanDA job id: 6748457527
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | task id: 45743349
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | errors: (none)
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | pilot state: finished 
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | transexitcode: 0
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | exeerrorcode: 0
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | exeerrordiag: 
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | exitcode: 0
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | exitmsg: OK
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | cpuconsumptiontime: 41222 s
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | nevents: 400
[2025-07-28 04:47:35] 2025-07-28 08:47:01,578 | INFO     | neventsw: 0
[2025-07-28 04:47:35] 2025-07-28 08:47:01,579 | INFO     | pid: 508177
[2025-07-28 04:47:35] 2025-07-28 08:47:01,579 | INFO     | pgrp: 508177
[2025-07-28 04:47:35] 2025-07-28 08:47:01,579 | INFO     | corecount: 12
[2025-07-28 04:47:35] 2025-07-28 08:47:01,579 | INFO     | event service: False
[2025-07-28 04:47:35] 2025-07-28 08:47:01,579 | INFO     | sizes: {0: 2397253, 1: 2397452, 5: 2397714, 11: 2397770, 4071: 2423725, 4072: 2432906, 4074: 2432906, 4081: 2433100}
[2025-07-28 04:47:35] 2025-07-28 08:47:01,579 | INFO     | --------------------------------------------------
[2025-07-28 04:47:35] 2025-07-28 08:47:01,579 | INFO     | 
[2025-07-28 04:47:35] 2025-07-28 08:47:01,579 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 04:47:35] 2025-07-28 08:47:01,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,598 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,598 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,598 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 04:47:35] 2025-07-28 08:47:01,599 | INFO     | job 6748457527 has completed (purged errors)
[2025-07-28 04:47:35] 2025-07-28 08:47:01,600 | INFO     | overall cleanup function is called
[2025-07-28 04:47:35] 2025-07-28 08:47:02,608 | INFO     | --- collectZombieJob: --- 10, [508177]
[2025-07-28 04:47:35] 2025-07-28 08:47:02,608 | INFO     | zombie collector waiting for pid 508177
[2025-07-28 04:47:35] 2025-07-28 08:47:02,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 04:47:35] 2025-07-28 08:47:02,608 | INFO     | collected zombie processes
[2025-07-28 04:47:35] 2025-07-28 08:47:02,609 | INFO     | will attempt to kill all subprocesses of pid=508177
[2025-07-28 04:47:35] 2025-07-28 08:47:02,856 | INFO     | process IDs to be killed: [508177] (in reverse order)
[2025-07-28 04:47:35] 2025-07-28 08:47:02,931 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 04:47:35] 2025-07-28 08:47:02,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 04:47:35] 2025-07-28 08:47:02,944 | INFO     | did not find any defunct processes belonging to 508177
[2025-07-28 04:47:35] 2025-07-28 08:47:02,956 | INFO     | did not find any defunct processes belonging to 508177
[2025-07-28 04:47:35] 2025-07-28 08:47:02,957 | INFO     | ready for new job
[2025-07-28 04:47:35] 2025-07-28 08:47:02,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 04:47:35] 2025-07-28 08:47:02,959 | INFO     | ***************************************
[2025-07-28 04:47:35] 2025-07-28 08:47:02,959 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 04:47:35] 2025-07-28 08:47:02,959 | INFO     | ***************************************
[2025-07-28 04:47:35] 2025-07-28 08:47:02,959 | INFO     | 
[2025-07-28 04:47:35] 2025-07-28 08:47:02,977 | INFO     | architecture information:
[2025-07-28 04:47:35] 2025-07-28 08:47:02,978 | INFO     | executing command: cat /etc/os-release
[2025-07-28 04:47:35] 2025-07-28 08:47:02,993 | INFO     | cat /etc/os-release:
[2025-07-28 04:47:35] NAME="CentOS Linux"
[2025-07-28 04:47:35] VERSION="7 (Core)"
[2025-07-28 04:47:35] ID="centos"
[2025-07-28 04:47:35] ID_LIKE="rhel fedora"
[2025-07-28 04:47:35] VERSION_ID="7"
[2025-07-28 04:47:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 04:47:35] ANSI_COLOR="0;31"
[2025-07-28 04:47:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 04:47:35] HOME_URL="https://www.centos.org/"
[2025-07-28 04:47:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 04:47:35] 
[2025-07-28 04:47:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 04:47:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 04:47:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 04:47:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 04:47:35] 
[2025-07-28 04:47:35] 2025-07-28 08:47:02,994 | INFO     | ***************************************
[2025-07-28 04:47:35] 2025-07-28 08:47:03,497 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 04:47:35] 2025-07-28 08:47:03,515 | INFO     | sufficient remaining disk space (76533465088 B)
[2025-07-28 04:47:35] 2025-07-28 08:47:03,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 04:47:35] 2025-07-28 08:47:03,516 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 04:47:35] 2025-07-28 08:47:03,516 | INFO     | update_server=False
[2025-07-28 04:47:35] 2025-07-28 08:47:03,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 04:47:35] 2025-07-28 08:47:03,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 04:47:35] 2025-07-28 08:47:03,613 | INFO     | aborting loop
[2025-07-28 04:47:35] 2025-07-28 08:47:03,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 04:47:35] 2025-07-28 08:47:04,217 | INFO     | all payload control threads have been joined
[2025-07-28 04:47:35] 2025-07-28 08:47:04,307 | INFO     | all data control threads have been joined
[2025-07-28 04:47:35] 2025-07-28 08:47:04,521 | INFO     | [job] retrieve thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:04,619 | INFO     | [job] job monitor thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:04,641 | INFO     | [payload] validate_post thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:04,683 | INFO     | [data] copytool_in thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:04,834 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:05,103 | INFO     | [job] validate thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:05,117 | INFO     | all job control threads have been joined
[2025-07-28 04:47:35] 2025-07-28 08:47:05,222 | INFO     | [payload] control thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:05,279 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:05,313 | INFO     | [data] control thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:05,335 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:05,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 04:47:35] 2025-07-28 08:47:05,786 | INFO     | [data] copytool_out thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:05,965 | INFO     | [payload] failed_post thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:06,121 | INFO     | [job] control thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:06,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 04:47:35] 2025-07-28 08:47:07,459 | INFO     | [job] queue monitor thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:09,600 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:13,588 | INFO     | job.realtimelogging is not enabled
[2025-07-28 04:47:35] 2025-07-28 08:47:14,593 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 04:47:35] 2025-07-28 08:47:16,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140001629439808)>', '<ExcThread(monitor, started 140001127933696)>']
[2025-07-28 04:47:35] 2025-07-28 08:47:21,059 | INFO     | all workflow threads have been joined
[2025-07-28 04:47:35] 2025-07-28 08:47:21,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 04:47:35] 2025-07-28 08:47:21,060 | INFO     | traces error code: 0
[2025-07-28 04:47:35] 2025-07-28 08:47:21,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 04:47:35] 2025-07-28 08:47:34,675 | INFO     | PID=498132 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 04:47:35] 2025-07-28 08:47:34,676 | INFO     | .. there are 15 such processes running
[2025-07-28 04:47:35] 2025-07-28 08:47:34,676 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 04:47:35] 2025-07-28 08:47:34,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 04:47:35] 2025-07-28 08:47:34,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 04:47:35] 2025-07-28 08:47:34,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 04:47:35] 2025-07-28 08:47:34,677 | INFO     | [monitor] control thread has ended
[2025-07-28 04:47:35] 2025-07-28 08:47:34,844 [wrapper] ==== pilot stdout END ====
[2025-07-28 04:47:35] 2025-07-28 08:47:34,846 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 04:47:35] 2025-07-28 08:47:34,850 [wrapper] pilotpid: 498132
[2025-07-28 04:47:35] 2025-07-28 08:47:34,853 [wrapper] Pilot exit status: 0
[2025-07-28 04:47:35] 2025-07-28 08:47:34,866 [wrapper] pandaids: 6748457527
[2025-07-28 04:47:35] 2025-07-28 08:47:34,934 [wrapper] cleanup supervisor_pilot  792040 498133
[2025-07-28 04:47:35] 2025-07-28 08:47:34,938 [wrapper] Test setup, not cleaning
[2025-07-28 04:47:35] 2025-07-28 08:47:34,942 [wrapper] apfmon messages muted
[2025-07-28 04:47:35] 2025-07-28 08:47:34,945 [wrapper] ==== wrapper stdout END ====
[2025-07-28 04:47:35] 2025-07-28 08:47:34,948 [wrapper] ==== wrapper stderr END ====
[2025-07-28 04:47:35]  *** Error codes and diagnostics ***
[2025-07-28 04:47:35]     "exeErrorCode": 0,
[2025-07-28 04:47:35]     "exeErrorDiag": "",
[2025-07-28 04:47:35]     "pilotErrorCode": 0,
[2025-07-28 04:47:35]     "pilotErrorDiag": "",
[2025-07-28 04:47:35]  *** Listing of results directory ***
[2025-07-28 04:47:35] total 343736
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas    530466 Jul 28 01:05 pilot3.tar.gz
[2025-07-28 04:47:35] -rwx------. 1 boincer umatlas     36292 Jul 28 01:22 runpilot2-wrapper.sh
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas      5112 Jul 28 01:22 queuedata.json
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas       100 Jul 28 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 04:47:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 03:38 run_atlas
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas       105 Jul 28 03:38 job.xml
[2025-07-28 04:47:35] -rw-r--r--. 2 boincer umatlas 143874658 Jul 28 03:38 EVNT.45743347._002854.pool.root.1
[2025-07-28 04:47:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 03:38 start_atlas.sh
[2025-07-28 04:47:35] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 03:38 shared
[2025-07-28 04:47:35] -rw-r--r--. 2 boincer umatlas    542896 Jul 28 03:38 input.tar.gz
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas         0 Jul 28 03:38 boinc_lockfile
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas      2562 Jul 28 03:38 pandaJob.out
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas    978452 Jul 28 03:38 agis_schedconf.cvmfs.json
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas   1593052 Jul 28 03:38 agis_ddmendpoints.agis.ALL.json
[2025-07-28 04:47:35] drwx------. 4 boincer umatlas      4096 Jul 28 03:38 pilot3
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas      6843 Jul 28 04:39 init_data.xml
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas       529 Jul 28 04:46 boinc_task_state.xml
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas 202719549 Jul 28 04:46 HITS.45743349._056239.pool.root.1
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas      1036 Jul 28 04:46 memory_monitor_summary.json
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas    355026 Jul 28 04:46 log.45743349._056239.job.log.tgz.1
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas      7827 Jul 28 04:47 heartbeat.json
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 04:47 boinc_mmap_file
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas        27 Jul 28 04:47 wrapper_checkpoint.txt
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas        95 Jul 28 04:47 pilot_heartbeat.json
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas       822 Jul 28 04:47 pilotlog.txt
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas    408773 Jul 28 04:47 log.45743349._056239.job.log.1
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas       357 Jul 28 04:47 output.list
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas       620 Jul 28 04:47 runtime_log
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas    778240 Jul 28 04:47 result.tar.gz
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas       654 Jul 28 04:47 SRsNDm7UV07n9Rq4apOajLDm4fhM0noT9bVof3QYDmpC3KDmCEBDTo.diag
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 04:47 runtime_log.err
[2025-07-28 04:47:35] -rw-r--r--. 1 boincer umatlas     22064 Jul 28 04:47 stderr.txt
[2025-07-28 04:47:35] HITS file was successfully produced:
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas 202719549 Jul 28 04:46 shared/HITS.pool.root.1
[2025-07-28 04:47:35]  *** Contents of shared directory: ***
[2025-07-28 04:47:35] total 339788
[2025-07-28 04:47:35] -rw-r--r--. 2 boincer umatlas 143874658 Jul 28 03:38 ATLAS.root_0
[2025-07-28 04:47:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 03:38 start_atlas.sh
[2025-07-28 04:47:35] -rw-r--r--. 2 boincer umatlas    542896 Jul 28 03:38 input.tar.gz
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas 202719549 Jul 28 04:46 HITS.pool.root.1
[2025-07-28 04:47:35] -rw-------. 1 boincer umatlas    778240 Jul 28 04:47 result.tar.gz
04:47:36 (493068): run_atlas exited; CPU time 41293.810882
04:47:36 (493068): called boinc_finish(0)

</stderr_txt>
]]>

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