Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:23:45 (2487391): wrapper (7.7.26015): starting
02:23:45 (2487391): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 02:23:45] Arguments: --nthreads 12
[2025-07-28 02:23:45] Threads: 12
[2025-07-28 02:23:45] Checking for CVMFS
[2025-07-28 02:23:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 02:23:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 02:23:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 02:23:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 02:23:45] 2.12.6.0 18753 19458 308008 148839 1 105 25574075 32935936 8592 16776704 0 34836011 99.633 74945980 26047 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 02:23:45] CVMFS is ok
[2025-07-28 02:23:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 02:23:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 02:23:45] Further information can be found at the LHC@home message board.
[2025-07-28 02:23:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 02:23:45] Checking for apptainer binary...
[2025-07-28 02:23:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 02:23:45] Running /usr/bin/apptainer --version
[2025-07-28 02:23:45] apptainer version 1.4.1-1.el9
[2025-07-28 02:23:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 02:23:45] c6-1-24-4.aglt2.org
[2025-07-28 02:23:45] apptainer works
[2025-07-28 02:23:45] Set ATHENA_PROC_NUMBER=12
[2025-07-28 02:23:45] Set ATHENA_CORE_NUMBER=12
[2025-07-28 02:23:45] Starting ATLAS job with PandaID=6748453949
[2025-07-28 02:23:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 03:36:01]  *** The last 200 lines of the pilot log: ***
[2025-07-28 03:36:01]  mtime=0
[2025-07-28 03:36:01]  protocol_id=None
[2025-07-28 03:36:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 03:36:01]  replicas=None
[2025-07-28 03:36:01]  scope=mc23_13p6TeV
[2025-07-28 03:36:01]  status=None
[2025-07-28 03:36:01]  status_code=0
[2025-07-28 03:36:01]  storage_token=
[2025-07-28 03:36:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748453949/log.45743349._056235.job.log.tgz.1
[2025-07-28 03:36:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/9d/log.45743349._056235.job.log.tgz.1
[2025-07-28 03:36:01]  workdir=None
[2025-07-28 03:36:01] ]
[2025-07-28 03:36:01] 2025-07-28 07:35:39,333 | INFO     | transferring file log.45743349._056235.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748453949/log.45743349._056235.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 03:36:01] 2025-07-28 07:35:39,333 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748453949/log.45743349._056235.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._056235.job
[2025-07-28 03:36:01] 2025-07-28 07:35:39,354 | INFO     | adding to output.list: log.45743349._056235.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/9d/log.45743349._056235.job.log.tg
[2025-07-28 03:36:01] 2025-07-28 07:35:39,355 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 03:36:01] 2025-07-28 07:35:39,356 | INFO     | summary of transferred files:
[2025-07-28 03:36:01] 2025-07-28 07:35:39,356 | INFO     |  -- lfn=log.45743349._056235.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 03:36:01] 2025-07-28 07:35:39,356 | INFO     | stage-out finished correctly
[2025-07-28 03:36:01] 2025-07-28 07:35:40,267 | INFO     | PID=2495704 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 03:36:01] 2025-07-28 07:35:40,268 | INFO     | .. there are 13 such processes running
[2025-07-28 03:36:01] 2025-07-28 07:35:40,471 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 03:36:01] 2025-07-28 07:35:41,268 | INFO     | 4303s have passed since pilot start - server update state is 'RUNNING'
[2025-07-28 03:36:01] 2025-07-28 07:35:42,027 | WARNING  | process 2505772 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 03:36:01] 2025-07-28 07:35:42,027 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748453949/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:36:01] 2025-07-28 07:35:42,280 | INFO     | number of running child processes to parent process 2505772: 1
[2025-07-28 03:36:01] 2025-07-28 07:35:42,281 | INFO     | maximum number of monitored processes: 6
[2025-07-28 03:36:01] 2025-07-28 07:35:42,541 | INFO     | job 6748453949 has state=finished
[2025-07-28 03:36:01] 2025-07-28 07:35:42,542 | INFO     | preparing for final server update for job 6748453949 in state='finished'
[2025-07-28 03:36:01] 2025-07-28 07:35:42,542 | INFO     | this job has now completed (state=finished)
[2025-07-28 03:36:01] 2025-07-28 07:35:42,542 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 03:36:01] 2025-07-28 07:35:42,542 | INFO     | log transfer has been attempted: DONE
[2025-07-28 03:36:01] 2025-07-28 07:35:42,543 | INFO     | job 6748453949 has finished - writing final server update
[2025-07-28 03:36:01] 2025-07-28 07:35:42,543 | INFO     | total number of processed events: 400 (read)
[2025-07-28 03:36:01] 2025-07-28 07:35:42,544 | INFO     | executing command: lscpu
[2025-07-28 03:36:01] 2025-07-28 07:35:42,599 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 03:36:01] 2025-07-28 07:35:44,783 | INFO     | monitor loop #319: job 0:6748453949 is in state 'finished'
[2025-07-28 03:36:01] 2025-07-28 07:35:44,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 03:36:01] 2025-07-28 07:35:46,931 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 03:36:01] 2025-07-28 07:35:46,935 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2778.5352500000004
[2025-07-28 03:36:01] 2025-07-28 07:35:46,945 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748453949/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:36:01] 2025-07-28 07:35:46,946 | INFO     | extracted standard info from prmon json
[2025-07-28 03:36:01] 2025-07-28 07:35:46,946 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 03:36:01] 2025-07-28 07:35:46,946 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 03:36:01] 2025-07-28 07:35:46,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 03:36:01] 2025-07-28 07:35:46,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 03:36:01] 2025-07-28 07:35:46,949 | INFO     | fitting pss+swap vs Time
[2025-07-28 03:36:01] 2025-07-28 07:35:46,949 | INFO     | sum of square deviations: 77515872.0
[2025-07-28 03:36:01] 2025-07-28 07:35:46,949 | INFO     | sum of deviations: -6083592829.999999
[2025-07-28 03:36:01] 2025-07-28 07:35:46,949 | INFO     | mean x: 1753686069.0
[2025-07-28 03:36:01] 2025-07-28 07:35:46,949 | INFO     | mean y: 2669194.603174603
[2025-07-28 03:36:01] 2025-07-28 07:35:46,950 | INFO     | -- intersect: 137635281976.65747
[2025-07-28 03:36:01] 2025-07-28 07:35:46,950 | INFO     | intersect: 137635281976.65747
[2025-07-28 03:36:01] 2025-07-28 07:35:46,950 | INFO     | chi2: 0.2676348804227264
[2025-07-28 03:36:01] 2025-07-28 07:35:46,950 | INFO     | -- intersect: 137635281976.65747
[2025-07-28 03:36:01] 2025-07-28 07:35:46,950 | INFO     | current memory leak: -78.48 B/s (using 63 data points, chi2=0.27)
[2025-07-28 03:36:01] 2025-07-28 07:35:46,950 | INFO     | could have reported an average CPU frequency of 2745 MHz (6 samples)
[2025-07-28 03:36:01] 2025-07-28 07:35:46,951 | INFO     | ..............................
[2025-07-28 03:36:01] 2025-07-28 07:35:46,951 | INFO     | . Timing measurements:
[2025-07-28 03:36:01] 2025-07-28 07:35:46,951 | INFO     | . get job = 0 s
[2025-07-28 03:36:01] 2025-07-28 07:35:46,951 | INFO     | . initial setup = 2 s
[2025-07-28 03:36:01] 2025-07-28 07:35:46,951 | INFO     | . payload setup = 9 s
[2025-07-28 03:36:01] 2025-07-28 07:35:46,951 | INFO     | . stage-in = 0 s
[2025-07-28 03:36:01] 2025-07-28 07:35:46,951 | INFO     | . payload execution = 4268 s
[2025-07-28 03:36:01] 2025-07-28 07:35:46,951 | INFO     | . stage-out = 0 s
[2025-07-28 03:36:01] 2025-07-28 07:35:46,951 | INFO     | . log creation = 0 s
[2025-07-28 03:36:01] 2025-07-28 07:35:46,951 | INFO     | ..............................
[2025-07-28 03:36:01] 2025-07-28 07:35:47,324 | INFO     | 
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | job summary report
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | --------------------------------------------------
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | PanDA job id: 6748453949
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | task id: 45743349
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | errors: (none)
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | pilot state: finished 
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | transexitcode: 0
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | exeerrorcode: 0
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | exeerrordiag: 
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | exitcode: 0
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | exitmsg: OK
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | cpuconsumptiontime: 45061 s
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | nevents: 400
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | neventsw: 0
[2025-07-28 03:36:01] 2025-07-28 07:35:47,325 | INFO     | pid: 2505772
[2025-07-28 03:36:01] 2025-07-28 07:35:47,326 | INFO     | pgrp: 2505772
[2025-07-28 03:36:01] 2025-07-28 07:35:47,326 | INFO     | corecount: 12
[2025-07-28 03:36:01] 2025-07-28 07:35:47,326 | INFO     | event service: False
[2025-07-28 03:36:01] 2025-07-28 07:35:47,326 | INFO     | sizes: {0: 2396594, 1: 2397450, 7: 2397712, 12: 2397740, 4281: 2423611, 4282: 2423610, 4283: 2432792, 4284: 2432848, 4290: 2433042}
[2025-07-28 03:36:01] 2025-07-28 07:35:47,326 | INFO     | --------------------------------------------------
[2025-07-28 03:36:01] 2025-07-28 07:35:47,326 | INFO     | 
[2025-07-28 03:36:01] 2025-07-28 07:35:47,326 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 03:36:01] 2025-07-28 07:35:47,346 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 03:36:01] 2025-07-28 07:35:47,347 | INFO     | job 6748453949 has completed (purged errors)
[2025-07-28 03:36:01] 2025-07-28 07:35:47,348 | INFO     | overall cleanup function is called
[2025-07-28 03:36:01] 2025-07-28 07:35:48,355 | INFO     | --- collectZombieJob: --- 10, [2505772]
[2025-07-28 03:36:01] 2025-07-28 07:35:48,355 | INFO     | zombie collector waiting for pid 2505772
[2025-07-28 03:36:01] 2025-07-28 07:35:48,356 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 03:36:01] 2025-07-28 07:35:48,356 | INFO     | collected zombie processes
[2025-07-28 03:36:01] 2025-07-28 07:35:48,356 | INFO     | will attempt to kill all subprocesses of pid=2505772
[2025-07-28 03:36:01] 2025-07-28 07:35:48,579 | INFO     | process IDs to be killed: [2505772] (in reverse order)
[2025-07-28 03:36:01] 2025-07-28 07:35:48,679 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 03:36:01] 2025-07-28 07:35:48,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 03:36:01] 2025-07-28 07:35:48,693 | INFO     | did not find any defunct processes belonging to 2505772
[2025-07-28 03:36:01] 2025-07-28 07:35:48,710 | INFO     | did not find any defunct processes belonging to 2505772
[2025-07-28 03:36:01] 2025-07-28 07:35:48,711 | INFO     | ready for new job
[2025-07-28 03:36:01] 2025-07-28 07:35:48,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 03:36:01] 2025-07-28 07:35:48,715 | INFO     | ***************************************
[2025-07-28 03:36:01] 2025-07-28 07:35:48,715 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 03:36:01] 2025-07-28 07:35:48,715 | INFO     | ***************************************
[2025-07-28 03:36:01] 2025-07-28 07:35:48,715 | INFO     | 
[2025-07-28 03:36:01] 2025-07-28 07:35:48,731 | INFO     | architecture information:
[2025-07-28 03:36:01] 2025-07-28 07:35:48,732 | INFO     | executing command: cat /etc/os-release
[2025-07-28 03:36:01] 2025-07-28 07:35:48,747 | INFO     | cat /etc/os-release:
[2025-07-28 03:36:01] NAME="CentOS Linux"
[2025-07-28 03:36:01] VERSION="7 (Core)"
[2025-07-28 03:36:01] ID="centos"
[2025-07-28 03:36:01] ID_LIKE="rhel fedora"
[2025-07-28 03:36:01] VERSION_ID="7"
[2025-07-28 03:36:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 03:36:01] ANSI_COLOR="0;31"
[2025-07-28 03:36:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 03:36:01] HOME_URL="https://www.centos.org/"
[2025-07-28 03:36:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 03:36:01] 
[2025-07-28 03:36:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 03:36:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 03:36:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 03:36:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 03:36:01] 
[2025-07-28 03:36:01] 2025-07-28 07:35:48,748 | INFO     | ***************************************
[2025-07-28 03:36:01] 2025-07-28 07:35:49,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 03:36:01] 2025-07-28 07:35:49,271 | INFO     | sufficient remaining disk space (76510396416 B)
[2025-07-28 03:36:01] 2025-07-28 07:35:49,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 03:36:01] 2025-07-28 07:35:49,271 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 03:36:01] 2025-07-28 07:35:49,271 | INFO     | update_server=False
[2025-07-28 03:36:01] 2025-07-28 07:35:49,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 03:36:01] 2025-07-28 07:35:49,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:36:01] 2025-07-28 07:35:49,272 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 03:36:01] 2025-07-28 07:35:49,272 | INFO     | aborting loop
[2025-07-28 03:36:01] 2025-07-28 07:35:49,273 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 03:36:01] 2025-07-28 07:35:49,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 03:36:01] 2025-07-28 07:35:49,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 03:36:01] 2025-07-28 07:35:49,357 | INFO     | all job control threads have been joined
[2025-07-28 03:36:01] 2025-07-28 07:35:49,425 | INFO     | all data control threads have been joined
[2025-07-28 03:36:01] 2025-07-28 07:35:49,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 03:36:01] 2025-07-28 07:35:50,276 | INFO     | [job] retrieve thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:50,278 | INFO     | [job] job monitor thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:50,329 | INFO     | [data] copytool_in thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:50,362 | INFO     | [job] control thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:50,430 | INFO     | [data] control thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:50,561 | INFO     | all payload control threads have been joined
[2025-07-28 03:36:01] 2025-07-28 07:35:50,579 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:50,651 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:50,783 | INFO     | [payload] validate_post thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:50,831 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:51,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 03:36:01] 2025-07-28 07:35:51,236 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:51,440 | INFO     | [job] validate thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:51,566 | INFO     | [payload] control thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:51,727 | INFO     | [payload] failed_post thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:51,973 | INFO     | [data] copytool_out thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:52,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:36:01] 2025-07-28 07:35:53,059 | INFO     | [job] queue monitor thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:55,047 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 03:36:01] 2025-07-28 07:35:55,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139969634129728)>', '<ExcThread(monitor, started 139968982787840)>']
[2025-07-28 03:36:01] 2025-07-28 07:35:56,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 03:36:01] 2025-07-28 07:35:56,309 | INFO     | [monitor] control thread has ended
[2025-07-28 03:36:01] 2025-07-28 07:36:00,878 | INFO     | all workflow threads have been joined
[2025-07-28 03:36:01] 2025-07-28 07:36:00,879 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 03:36:01] 2025-07-28 07:36:00,879 | INFO     | traces error code: 0
[2025-07-28 03:36:01] 2025-07-28 07:36:00,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 03:36:01] 2025-07-28 07:36:01,026 [wrapper] ==== pilot stdout END ====
[2025-07-28 03:36:01] 2025-07-28 07:36:01,029 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 03:36:01] 2025-07-28 07:36:01,033 [wrapper] pilotpid: 2495704
[2025-07-28 03:36:01] 2025-07-28 07:36:01,036 [wrapper] Pilot exit status: 0
[2025-07-28 03:36:01] 2025-07-28 07:36:01,048 [wrapper] pandaids: 6748453949
[2025-07-28 03:36:01] 2025-07-28 07:36:01,126 [wrapper] cleanup supervisor_pilot 2787810 2495705
[2025-07-28 03:36:01] 2025-07-28 07:36:01,130 [wrapper] Test setup, not cleaning
[2025-07-28 03:36:01] 2025-07-28 07:36:01,133 [wrapper] apfmon messages muted
[2025-07-28 03:36:01] 2025-07-28 07:36:01,137 [wrapper] ==== wrapper stdout END ====
[2025-07-28 03:36:01] 2025-07-28 07:36:01,140 [wrapper] ==== wrapper stderr END ====
[2025-07-28 03:36:01]  *** Error codes and diagnostics ***
[2025-07-28 03:36:01]     "exeErrorCode": 0,
[2025-07-28 03:36:01]     "exeErrorDiag": "",
[2025-07-28 03:36:01]     "pilotErrorCode": 0,
[2025-07-28 03:36:01]     "pilotErrorDiag": "",
[2025-07-28 03:36:01]  *** Listing of results directory ***
[2025-07-28 03:36:01] total 432148
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas    530466 Jul 28 01:05 pilot3.tar.gz
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas      5112 Jul 28 01:08 queuedata.json
[2025-07-28 03:36:01] -rwx------. 1 boincer umatlas     36292 Jul 28 01:11 runpilot2-wrapper.sh
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas       100 Jul 28 02:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 03:36:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 02:23 run_atlas
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas       105 Jul 28 02:23 job.xml
[2025-07-28 03:36:01] -rw-r--r--. 2 boincer umatlas 229454013 Jul 28 02:23 EVNT.45743347._001413.pool.root.1
[2025-07-28 03:36:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 02:23 start_atlas.sh
[2025-07-28 03:36:01] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 02:23 shared
[2025-07-28 03:36:01] -rw-r--r--. 2 boincer umatlas    542901 Jul 28 02:23 input.tar.gz
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas         0 Jul 28 02:23 boinc_lockfile
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas      2561 Jul 28 02:23 pandaJob.out
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas    978460 Jul 28 02:23 agis_schedconf.cvmfs.json
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas   1593052 Jul 28 02:23 agis_ddmendpoints.agis.ALL.json
[2025-07-28 03:36:01] drwx------. 4 boincer umatlas      4096 Jul 28 02:24 pilot3
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas      6843 Jul 28 03:30 init_data.xml
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas       529 Jul 28 03:35 boinc_task_state.xml
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas 207603621 Jul 28 03:35 HITS.45743349._056235.pool.root.1
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas        95 Jul 28 03:35 pilot_heartbeat.json
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas      1040 Jul 28 03:35 memory_monitor_summary.json
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas    361661 Jul 28 03:35 log.45743349._056235.job.log.tgz.1
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas      7828 Jul 28 03:35 heartbeat.json
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 03:35 boinc_mmap_file
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas        27 Jul 28 03:36 wrapper_checkpoint.txt
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas      4480 Jul 28 03:36 pilotlog.txt
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas    432114 Jul 28 03:36 log.45743349._056235.job.log.1
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas       357 Jul 28 03:36 output.list
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas       620 Jul 28 03:36 runtime_log
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas    808960 Jul 28 03:36 result.tar.gz
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas       656 Jul 28 03:36 SlDNDmOKV07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRbWLDmKa1FRm.diag
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 03:36 runtime_log.err
[2025-07-28 03:36:01] -rw-r--r--. 1 boincer umatlas     21816 Jul 28 03:36 stderr.txt
[2025-07-28 03:36:01] HITS file was successfully produced:
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas 207603621 Jul 28 03:35 shared/HITS.pool.root.1
[2025-07-28 03:36:01]  *** Contents of shared directory: ***
[2025-07-28 03:36:01] total 428164
[2025-07-28 03:36:01] -rw-r--r--. 2 boincer umatlas 229454013 Jul 28 02:23 ATLAS.root_0
[2025-07-28 03:36:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 02:23 start_atlas.sh
[2025-07-28 03:36:01] -rw-r--r--. 2 boincer umatlas    542901 Jul 28 02:23 input.tar.gz
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas 207603621 Jul 28 03:35 HITS.pool.root.1
[2025-07-28 03:36:01] -rw-------. 1 boincer umatlas    808960 Jul 28 03:36 result.tar.gz
03:36:03 (2487391): run_atlas exited; CPU time 45118.172347
03:36:03 (2487391): called boinc_finish(0)

</stderr_txt>
]]>

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