Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:40:31 (3489846): wrapper (7.7.26015): starting
00:40:31 (3489846): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 00:40:31] Arguments: --nthreads 8
[2025-07-28 00:40:31] Threads: 8
[2025-07-28 00:40:31] Checking for CVMFS
[2025-07-28 00:40:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:40:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:40:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:40:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:40:31] 2.13.1.0 5036 14955 260148 148836 2 196 35901991 40960001 6579 16776704 0 81299450 99.782 68367699 33636 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 00:40:31] CVMFS is ok
[2025-07-28 00:40:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 00:40:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 00:40:31] Further information can be found at the LHC@home message board.
[2025-07-28 00:40:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:40:31] Checking for apptainer binary...
[2025-07-28 00:40:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 00:40:31] Running /usr/bin/apptainer --version
[2025-07-28 00:40:31] apptainer version 1.4.1-1.el9
[2025-07-28 00:40:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:40:31] c-212-2.aglt2.org
[2025-07-28 00:40:31] apptainer works
[2025-07-28 00:40:31] Set ATHENA_PROC_NUMBER=8
[2025-07-28 00:40:31] Set ATHENA_CORE_NUMBER=8
[2025-07-28 00:40:31] Starting ATLAS job with PandaID=6748440901
[2025-07-28 00:40:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:26:54]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:26:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 01:26:54]  replicas=None
[2025-07-28 01:26:54]  scope=mc23_13p6TeV
[2025-07-28 01:26:54]  status=None
[2025-07-28 01:26:54]  status_code=0
[2025-07-28 01:26:54]  storage_token=
[2025-07-28 01:26:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748440901/log.45743349._056216.job.log.tgz.1
[2025-07-28 01:26:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/1b/log.45743349._056216.job.log.tgz.1
[2025-07-28 01:26:54]  workdir=None
[2025-07-28 01:26:54] ]
[2025-07-28 01:26:54] 2025-07-28 05:26:28,525 | INFO     | transferring file log.45743349._056216.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748440901/log.45743349._056216.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 01:26:54] 2025-07-28 05:26:28,526 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748440901/log.45743349._056216.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._056216.job
[2025-07-28 01:26:54] 2025-07-28 05:26:28,537 | INFO     | adding to output.list: log.45743349._056216.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/1b/log.45743349._056216.job.log.tg
[2025-07-28 01:26:54] 2025-07-28 05:26:28,538 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 01:26:54] 2025-07-28 05:26:28,538 | INFO     | summary of transferred files:
[2025-07-28 01:26:54] 2025-07-28 05:26:28,538 | INFO     |  -- lfn=log.45743349._056216.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 01:26:54] 2025-07-28 05:26:28,538 | INFO     | stage-out finished correctly
[2025-07-28 01:26:54] 2025-07-28 05:26:28,810 | INFO     | number of running child processes to parent process 3499881: 1
[2025-07-28 01:26:54] 2025-07-28 05:26:28,810 | INFO     | maximum number of monitored processes: 6
[2025-07-28 01:26:54] 2025-07-28 05:26:28,906 | INFO     | PID=3493447 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:26:54] 2025-07-28 05:26:28,906 | INFO     | .. there are 3 such processes running
[2025-07-28 01:26:54] 2025-07-28 05:26:29,847 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 01:26:54] 2025-07-28 05:26:31,313 | INFO     | monitor loop #209: job 0:6748440901 is in state 'finished'
[2025-07-28 01:26:54] 2025-07-28 05:26:31,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:26:54] 2025-07-28 05:26:31,343 | INFO     | job 6748440901 has state=finished
[2025-07-28 01:26:54] 2025-07-28 05:26:31,343 | INFO     | preparing for final server update for job 6748440901 in state='finished'
[2025-07-28 01:26:54] 2025-07-28 05:26:31,344 | INFO     | this job has now completed (state=finished)
[2025-07-28 01:26:54] 2025-07-28 05:26:31,344 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 01:26:54] 2025-07-28 05:26:31,344 | INFO     | log transfer has been attempted: DONE
[2025-07-28 01:26:54] 2025-07-28 05:26:31,344 | INFO     | job 6748440901 has finished - writing final server update
[2025-07-28 01:26:54] 2025-07-28 05:26:31,344 | INFO     | total number of processed events: 400 (read)
[2025-07-28 01:26:54] 2025-07-28 05:26:31,344 | INFO     | executing command: lscpu
[2025-07-28 01:26:54] 2025-07-28 05:26:31,385 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 01:26:54] 2025-07-28 05:26:33,816 | INFO     | monitor loop #210: job 0:6748440901 is in state 'finished'
[2025-07-28 01:26:54] 2025-07-28 05:26:33,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:26:54] 2025-07-28 05:26:34,041 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 01:26:54] 2025-07-28 05:26:34,044 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2936.5932291666686
[2025-07-28 01:26:54] 2025-07-28 05:26:34,052 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748440901/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:26:54] 2025-07-28 05:26:34,052 | INFO     | extracted standard info from prmon json
[2025-07-28 01:26:54] 2025-07-28 05:26:34,052 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:26:54] 2025-07-28 05:26:34,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:26:54] 2025-07-28 05:26:34,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:26:54] 2025-07-28 05:26:34,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:26:54] 2025-07-28 05:26:34,053 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:26:54] 2025-07-28 05:26:34,054 | INFO     | sum of square deviations: 17003109.5
[2025-07-28 01:26:54] 2025-07-28 05:26:34,054 | INFO     | sum of deviations: -327068610.49999994
[2025-07-28 01:26:54] 2025-07-28 05:26:34,054 | INFO     | mean x: 1753679101.5
[2025-07-28 01:26:54] 2025-07-28 05:26:34,054 | INFO     | mean y: 2610241.710526316
[2025-07-28 01:26:54] 2025-07-28 05:26:34,054 | INFO     | -- intersect: 33736050997.97298
[2025-07-28 01:26:54] 2025-07-28 05:26:34,054 | INFO     | intersect: 33736050997.97298
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | chi2: 0.007621843389379062
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | -- intersect: 33736050997.97298
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | current memory leak: -19.24 B/s (using 38 data points, chi2=0.01)
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | could have reported an average CPU frequency of 3218 MHz (5 samples)
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | ..............................
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | . Timing measurements:
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | . get job = 0 s
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | . initial setup = 2 s
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | . payload setup = 6 s
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | . stage-in = 0 s
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | . payload execution = 2721 s
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | . stage-out = 0 s
[2025-07-28 01:26:54] 2025-07-28 05:26:34,055 | INFO     | . log creation = 0 s
[2025-07-28 01:26:54] 2025-07-28 05:26:34,056 | INFO     | ..............................
[2025-07-28 01:26:54] 2025-07-28 05:26:34,101 | INFO     | 
[2025-07-28 01:26:54] 2025-07-28 05:26:34,101 | INFO     | job summary report
[2025-07-28 01:26:54] 2025-07-28 05:26:34,101 | INFO     | --------------------------------------------------
[2025-07-28 01:26:54] 2025-07-28 05:26:34,101 | INFO     | PanDA job id: 6748440901
[2025-07-28 01:26:54] 2025-07-28 05:26:34,101 | INFO     | task id: 45743349
[2025-07-28 01:26:54] 2025-07-28 05:26:34,101 | INFO     | errors: (none)
[2025-07-28 01:26:54] 2025-07-28 05:26:34,101 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:26:54] 2025-07-28 05:26:34,101 | INFO     | pilot state: finished 
[2025-07-28 01:26:54] 2025-07-28 05:26:34,101 | INFO     | transexitcode: 0
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | exeerrorcode: 0
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | exeerrordiag: 
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | exitcode: 0
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | exitmsg: OK
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | cpuconsumptiontime: 20346 s
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | nevents: 400
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | neventsw: 0
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | pid: 3499881
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | pgrp: 3499881
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | corecount: 8
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | event service: False
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | sizes: {0: 2397201, 1: 2397400, 5: 2397662, 11: 2397718, 2732: 2423067, 2733: 2432093, 2734: 2432277, 2738: 2432503}
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | --------------------------------------------------
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | 
[2025-07-28 01:26:54] 2025-07-28 05:26:34,102 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 01:26:54] 2025-07-28 05:26:34,116 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,116 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,116 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,116 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | job 6748440901 has completed (purged errors)
[2025-07-28 01:26:54] 2025-07-28 05:26:34,117 | INFO     | overall cleanup function is called
[2025-07-28 01:26:54] 2025-07-28 05:26:35,124 | INFO     | --- collectZombieJob: --- 10, [3499881]
[2025-07-28 01:26:54] 2025-07-28 05:26:35,124 | INFO     | zombie collector waiting for pid 3499881
[2025-07-28 01:26:54] 2025-07-28 05:26:35,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:26:54] 2025-07-28 05:26:35,124 | INFO     | collected zombie processes
[2025-07-28 01:26:54] 2025-07-28 05:26:35,124 | INFO     | will attempt to kill all subprocesses of pid=3499881
[2025-07-28 01:26:54] 2025-07-28 05:26:35,299 | INFO     | process IDs to be killed: [3499881] (in reverse order)
[2025-07-28 01:26:54] 2025-07-28 05:26:35,359 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:26:54] 2025-07-28 05:26:35,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:26:54] 2025-07-28 05:26:35,365 | INFO     | did not find any defunct processes belonging to 3499881
[2025-07-28 01:26:54] 2025-07-28 05:26:35,370 | INFO     | did not find any defunct processes belonging to 3499881
[2025-07-28 01:26:54] 2025-07-28 05:26:35,370 | INFO     | ready for new job
[2025-07-28 01:26:54] 2025-07-28 05:26:35,370 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:26:54] 2025-07-28 05:26:35,371 | INFO     | ***************************************
[2025-07-28 01:26:54] 2025-07-28 05:26:35,372 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:26:54] 2025-07-28 05:26:35,372 | INFO     | ***************************************
[2025-07-28 01:26:54] 2025-07-28 05:26:35,372 | INFO     | 
[2025-07-28 01:26:54] 2025-07-28 05:26:35,375 | INFO     | architecture information:
[2025-07-28 01:26:54] 2025-07-28 05:26:35,375 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:26:54] 2025-07-28 05:26:35,384 | INFO     | cat /etc/os-release:
[2025-07-28 01:26:54] NAME="CentOS Linux"
[2025-07-28 01:26:54] VERSION="7 (Core)"
[2025-07-28 01:26:54] ID="centos"
[2025-07-28 01:26:54] ID_LIKE="rhel fedora"
[2025-07-28 01:26:54] VERSION_ID="7"
[2025-07-28 01:26:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:26:54] ANSI_COLOR="0;31"
[2025-07-28 01:26:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:26:54] HOME_URL="https://www.centos.org/"
[2025-07-28 01:26:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:26:54] 
[2025-07-28 01:26:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:26:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:26:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:26:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:26:54] 
[2025-07-28 01:26:54] 2025-07-28 05:26:35,384 | INFO     | ***************************************
[2025-07-28 01:26:54] 2025-07-28 05:26:35,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 01:26:54] 2025-07-28 05:26:35,898 | INFO     | sufficient remaining disk space (129326120960 B)
[2025-07-28 01:26:54] 2025-07-28 05:26:35,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:26:54] 2025-07-28 05:26:35,899 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:26:54] 2025-07-28 05:26:35,899 | INFO     | update_server=False
[2025-07-28 01:26:54] 2025-07-28 05:26:35,899 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:26:54] 2025-07-28 05:26:35,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:26:54] 2025-07-28 05:26:35,899 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 01:26:54] 2025-07-28 05:26:35,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:26:54] 2025-07-28 05:26:35,900 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:26:54] 2025-07-28 05:26:35,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:26:54] 2025-07-28 05:26:35,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:26:54] 2025-07-28 05:26:35,952 | INFO     | all data control threads have been joined
[2025-07-28 01:26:54] 2025-07-28 05:26:36,093 | INFO     | all payload control threads have been joined
[2025-07-28 01:26:54] 2025-07-28 05:26:36,319 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 01:26:54] 2025-07-28 05:26:36,319 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 01:26:54] 2025-07-28 05:26:36,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:26:54] 2025-07-28 05:26:36,319 | INFO     | will abort loop
[2025-07-28 01:26:54] 2025-07-28 05:26:36,588 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:26:54] 2025-07-28 05:26:36,904 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:36,906 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:36,951 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:36,957 | INFO     | [data] control thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:36,980 | INFO     | all job control threads have been joined
[2025-07-28 01:26:54] 2025-07-28 05:26:37,055 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:37,098 | INFO     | [payload] control thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:37,325 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:37,839 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:37,985 | INFO     | [job] control thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:38,096 | INFO     | [job] validate thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:38,096 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:38,121 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:38,480 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:38,593 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:39,905 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:46,790 | INFO     | job.realtimelogging is not enabled
[2025-07-28 01:26:54] 2025-07-28 05:26:47,795 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:26:54] 2025-07-28 05:26:49,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595167283008)>', '<ExcThread(monitor, started 140594546472704)>']
[2025-07-28 01:26:54] 2025-07-28 05:26:49,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:26:54] 2025-07-28 05:26:49,972 | INFO     | [monitor] control thread has ended
[2025-07-28 01:26:54] 2025-07-28 05:26:54,695 | INFO     | all workflow threads have been joined
[2025-07-28 01:26:54] 2025-07-28 05:26:54,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:26:54] 2025-07-28 05:26:54,696 | INFO     | traces error code: 0
[2025-07-28 01:26:54] 2025-07-28 05:26:54,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:26:54] 2025-07-28 05:26:54,774 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:26:54] 2025-07-28 05:26:54,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:26:54] 2025-07-28 05:26:54,779 [wrapper] pilotpid: 3493447
[2025-07-28 01:26:54] 2025-07-28 05:26:54,781 [wrapper] Pilot exit status: 0
[2025-07-28 01:26:54] 2025-07-28 05:26:54,789 [wrapper] pandaids: 6748440901
[2025-07-28 01:26:54] 2025-07-28 05:26:54,835 [wrapper] cleanup supervisor_pilot 3603175 3493448
[2025-07-28 01:26:54] 2025-07-28 05:26:54,838 [wrapper] Test setup, not cleaning
[2025-07-28 01:26:54] 2025-07-28 05:26:54,840 [wrapper] apfmon messages muted
[2025-07-28 01:26:54] 2025-07-28 05:26:54,842 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:26:54] 2025-07-28 05:26:54,844 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:26:54]  *** Error codes and diagnostics ***
[2025-07-28 01:26:54]     "exeErrorCode": 0,
[2025-07-28 01:26:54]     "exeErrorDiag": "",
[2025-07-28 01:26:54]     "pilotErrorCode": 0,
[2025-07-28 01:26:54]     "pilotErrorDiag": "",
[2025-07-28 01:26:54]  *** Listing of results directory ***
[2025-07-28 01:26:54] total 430640
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 23:59 pilot3.tar.gz
[2025-07-28 01:26:54] -rwx------. 1 boincer umatlas     36292 Jul 28 00:39 runpilot2-wrapper.sh
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas      5112 Jul 28 00:39 queuedata.json
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas       100 Jul 28 00:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:26:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 00:40 run_atlas
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas       105 Jul 28 00:40 job.xml
[2025-07-28 01:26:54] -rw-r--r--. 2 boincer umatlas 229454013 Jul 28 00:40 EVNT.45743347._001413.pool.root.1
[2025-07-28 01:26:54] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 00:40 start_atlas.sh
[2025-07-28 01:26:54] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 00:40 shared
[2025-07-28 01:26:54] -rw-r--r--. 2 boincer umatlas    542895 Jul 28 00:40 input.tar.gz
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas         0 Jul 28 00:40 boinc_lockfile
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas      2561 Jul 28 00:40 pandaJob.out
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas    980125 Jul 28 00:40 agis_schedconf.cvmfs.json
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas   1593052 Jul 28 00:40 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:26:54] drwx------. 4 boincer umatlas      4096 Jul 28 00:40 pilot3
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas      6947 Jul 28 01:20 init_data.xml
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas 206487163 Jul 28 01:26 HITS.45743349._056216.pool.root.1
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas       529 Jul 28 01:26 boinc_task_state.xml
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas        95 Jul 28 01:26 pilot_heartbeat.json
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas      1024 Jul 28 01:26 memory_monitor_summary.json
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas    279212 Jul 28 01:26 log.45743349._056216.job.log.tgz.1
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas      7762 Jul 28 01:26 heartbeat.json
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:26 boinc_mmap_file
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:26 wrapper_checkpoint.txt
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas      4739 Jul 28 01:26 pilotlog.txt
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas    295756 Jul 28 01:26 log.45743349._056216.job.log.1
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas       357 Jul 28 01:26 output.list
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:26 runtime_log
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas    593920 Jul 28 01:26 result.tar.gz
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas      8655 Jul 28 01:26 runtime_log.err
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas       649 Jul 28 01:26 JurLDmfpU07n9Rq4apOajLDm4fhM0noT9bVof3QYDmdC3KDm9z1NIn.diag
[2025-07-28 01:26:54] -rw-r--r--. 1 boincer umatlas     21874 Jul 28 01:26 stderr.txt
[2025-07-28 01:26:54] HITS file was successfully produced:
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas 206487163 Jul 28 01:26 shared/HITS.pool.root.1
[2025-07-28 01:26:54]  *** Contents of shared directory: ***
[2025-07-28 01:26:54] total 426864
[2025-07-28 01:26:54] -rw-r--r--. 2 boincer umatlas 229454013 Jul 28 00:40 ATLAS.root_0
[2025-07-28 01:26:54] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 00:40 start_atlas.sh
[2025-07-28 01:26:54] -rw-r--r--. 2 boincer umatlas    542895 Jul 28 00:40 input.tar.gz
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas 206487163 Jul 28 01:26 HITS.pool.root.1
[2025-07-28 01:26:54] -rw-------. 1 boincer umatlas    593920 Jul 28 01:26 result.tar.gz
01:26:56 (3489846): run_atlas exited; CPU time 20377.877636
01:26:56 (3489846): called boinc_finish(0)

</stderr_txt>
]]>

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