Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:44 (3400933): wrapper (7.7.26015): starting
00:13:44 (3400933): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 00:13:44] Arguments: --nthreads 8
[2025-07-28 00:13:44] Threads: 8
[2025-07-28 00:13:44] Checking for CVMFS
[2025-07-28 00:13:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:13:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:13:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:13:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:13:45] 2.13.1.0 5036 14928 261276 148835 0 19 35891602 40960000 8411 16776704 0 81088532 99.782 68366403 33635 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-28 00:13:45] CVMFS is ok
[2025-07-28 00:13:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 00:13:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 00:13:45] Further information can be found at the LHC@home message board.
[2025-07-28 00:13:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:13:45] Checking for apptainer binary...
[2025-07-28 00:13:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 00:13:45] Running /usr/bin/apptainer --version
[2025-07-28 00:13:45] apptainer version 1.4.1-1.el9
[2025-07-28 00:13:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:13:45] c-212-2.aglt2.org
[2025-07-28 00:13:45] apptainer works
[2025-07-28 00:13:45] Set ATHENA_PROC_NUMBER=8
[2025-07-28 00:13:45] Set ATHENA_CORE_NUMBER=8
[2025-07-28 00:13:45] Starting ATLAS job with PandaID=6748187552
[2025-07-28 00:13:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:12:58]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:12:58]  lfn=log.45743349._055638.job.log.tgz.1
[2025-07-28 01:12:58]  mtime=0
[2025-07-28 01:12:58]  protocol_id=None
[2025-07-28 01:12:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 01:12:58]  replicas=None
[2025-07-28 01:12:58]  scope=mc23_13p6TeV
[2025-07-28 01:12:58]  status=None
[2025-07-28 01:12:58]  status_code=0
[2025-07-28 01:12:58]  storage_token=
[2025-07-28 01:12:58]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6748187552/log.45743349._055638.job.log.tgz.1
[2025-07-28 01:12:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/1d/log.45743349._055638.job.log.tgz.1
[2025-07-28 01:12:58]  workdir=None
[2025-07-28 01:12:58] ]
[2025-07-28 01:12:58] 2025-07-28 05:12:19,346 | INFO     | transferring file log.45743349._055638.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6748187552/log.45743349._055638.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 01:12:58] 2025-07-28 05:12:19,346 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6748187552/log.45743349._055638.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._055638.job
[2025-07-28 01:12:58] 2025-07-28 05:12:19,361 | INFO     | adding to output.list: log.45743349._055638.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/1d/log.45743349._055638.job.log.tg
[2025-07-28 01:12:58] 2025-07-28 05:12:19,361 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 01:12:58] 2025-07-28 05:12:19,361 | INFO     | summary of transferred files:
[2025-07-28 01:12:58] 2025-07-28 05:12:19,361 | INFO     |  -- lfn=log.45743349._055638.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 01:12:58] 2025-07-28 05:12:19,361 | INFO     | stage-out finished correctly
[2025-07-28 01:12:58] 2025-07-28 05:12:19,501 | INFO     | monitor loop #265: job 0:6748187552 is in state 'finished'
[2025-07-28 01:12:58] 2025-07-28 05:12:19,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:12:58] 2025-07-28 05:12:22,004 | INFO     | monitor loop #266: job 0:6748187552 is in state 'finished'
[2025-07-28 01:12:58] 2025-07-28 05:12:22,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:12:58] 2025-07-28 05:12:22,037 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 01:12:58] 2025-07-28 05:12:23,699 | INFO     | job 6748187552 has state=finished
[2025-07-28 01:12:58] 2025-07-28 05:12:23,699 | INFO     | preparing for final server update for job 6748187552 in state='finished'
[2025-07-28 01:12:58] 2025-07-28 05:12:23,768 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-28 01:12:58] 2025-07-28 05:12:23,768 | INFO     | this job has now completed (state=finished)
[2025-07-28 01:12:58] 2025-07-28 05:12:23,768 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 01:12:58] 2025-07-28 05:12:23,768 | INFO     | log transfer has been attempted: DONE
[2025-07-28 01:12:58] 2025-07-28 05:12:23,768 | INFO     | job 6748187552 has finished - writing final server update
[2025-07-28 01:12:58] 2025-07-28 05:12:23,769 | INFO     | total number of processed events: 400 (read)
[2025-07-28 01:12:58] 2025-07-28 05:12:23,769 | INFO     | executing command: lscpu
[2025-07-28 01:12:58] 2025-07-28 05:12:23,811 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 01:12:58] 2025-07-28 05:12:24,507 | INFO     | monitor loop #267: job 0:6748187552 is in state 'finished'
[2025-07-28 01:12:58] 2025-07-28 05:12:24,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:12:58] 2025-07-28 05:12:26,716 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 01:12:58] 2025-07-28 05:12:26,721 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3156.564770833336
[2025-07-28 01:12:58] 2025-07-28 05:12:26,729 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6748187552/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:12:58] 2025-07-28 05:12:26,730 | INFO     | extracted standard info from prmon json
[2025-07-28 01:12:58] 2025-07-28 05:12:26,730 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:12:58] 2025-07-28 05:12:26,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:12:58] 2025-07-28 05:12:26,730 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:12:58] 2025-07-28 05:12:26,730 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:12:58] 2025-07-28 05:12:26,731 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:12:58] 2025-07-28 05:12:26,731 | INFO     | sum of square deviations: 38744912.5
[2025-07-28 01:12:58] 2025-07-28 05:12:26,731 | INFO     | sum of deviations: -249716706.5
[2025-07-28 01:12:58] 2025-07-28 05:12:26,731 | INFO     | mean x: 1753677865.5
[2025-07-28 01:12:58] 2025-07-28 05:12:26,731 | INFO     | mean y: 2612132.1
[2025-07-28 01:12:58] 2025-07-28 05:12:26,731 | INFO     | -- intersect: 11305326026.07537
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | intersect: 11305326026.07537
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | chi2: 0.0022663092610765694
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | -- intersect: 11305326026.07537
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | current memory leak: -6.45 B/s (using 50 data points, chi2=0.00)
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | could have reported an average CPU frequency of 3283 MHz (5 samples)
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | ..............................
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | . Timing measurements:
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | . get job = 0 s
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | . initial setup = 2 s
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | . payload setup = 7 s
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | . stage-in = 0 s
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | . payload execution = 3473 s
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | . stage-out = 0 s
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | . log creation = 0 s
[2025-07-28 01:12:58] 2025-07-28 05:12:26,732 | INFO     | ..............................
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | 
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | job summary report
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | --------------------------------------------------
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | PanDA job id: 6748187552
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | task id: 45743349
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | errors: (none)
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | pilot state: finished 
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | transexitcode: 0
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | exeerrorcode: 0
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | exeerrordiag: 
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | exitcode: 0
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | exitmsg: OK
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | cpuconsumptiontime: 25284 s
[2025-07-28 01:12:58] 2025-07-28 05:12:26,851 | INFO     | nevents: 400
[2025-07-28 01:12:58] 2025-07-28 05:12:26,852 | INFO     | neventsw: 0
[2025-07-28 01:12:58] 2025-07-28 05:12:26,852 | INFO     | pid: 3417246
[2025-07-28 01:12:58] 2025-07-28 05:12:26,852 | INFO     | pgrp: 3417246
[2025-07-28 01:12:58] 2025-07-28 05:12:26,852 | INFO     | corecount: 8
[2025-07-28 01:12:58] 2025-07-28 05:12:26,852 | INFO     | event service: False
[2025-07-28 01:12:58] 2025-07-28 05:12:26,852 | INFO     | sizes: {0: 2397425, 5: 2397687, 11: 2397743, 3484: 2423330, 3485: 2423329, 3486: 2432383, 3489: 2432567, 3494: 2432793}
[2025-07-28 01:12:58] 2025-07-28 05:12:26,852 | INFO     | --------------------------------------------------
[2025-07-28 01:12:58] 2025-07-28 05:12:26,852 | INFO     | 
[2025-07-28 01:12:58] 2025-07-28 05:12:26,852 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,867 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,868 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,868 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,868 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:12:58] 2025-07-28 05:12:26,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,868 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:12:58] 2025-07-28 05:12:26,868 | INFO     | job 6748187552 has completed (purged errors)
[2025-07-28 01:12:58] 2025-07-28 05:12:26,868 | INFO     | overall cleanup function is called
[2025-07-28 01:12:58] 2025-07-28 05:12:27,875 | INFO     | --- collectZombieJob: --- 10, [3417246]
[2025-07-28 01:12:58] 2025-07-28 05:12:27,876 | INFO     | zombie collector waiting for pid 3417246
[2025-07-28 01:12:58] 2025-07-28 05:12:27,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:12:58] 2025-07-28 05:12:27,876 | INFO     | collected zombie processes
[2025-07-28 01:12:58] 2025-07-28 05:12:27,876 | INFO     | will attempt to kill all subprocesses of pid=3417246
[2025-07-28 01:12:58] 2025-07-28 05:12:28,060 | INFO     | process IDs to be killed: [3417246] (in reverse order)
[2025-07-28 01:12:58] 2025-07-28 05:12:28,132 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:12:58] 2025-07-28 05:12:28,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:12:58] 2025-07-28 05:12:28,140 | INFO     | did not find any defunct processes belonging to 3417246
[2025-07-28 01:12:58] 2025-07-28 05:12:28,146 | INFO     | did not find any defunct processes belonging to 3417246
[2025-07-28 01:12:58] 2025-07-28 05:12:28,147 | INFO     | ready for new job
[2025-07-28 01:12:58] 2025-07-28 05:12:28,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:12:58] 2025-07-28 05:12:28,148 | INFO     | ***************************************
[2025-07-28 01:12:58] 2025-07-28 05:12:28,148 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:12:58] 2025-07-28 05:12:28,148 | INFO     | ***************************************
[2025-07-28 01:12:58] 2025-07-28 05:12:28,148 | INFO     | 
[2025-07-28 01:12:58] 2025-07-28 05:12:28,152 | INFO     | architecture information:
[2025-07-28 01:12:58] 2025-07-28 05:12:28,153 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:12:58] 2025-07-28 05:12:28,168 | INFO     | cat /etc/os-release:
[2025-07-28 01:12:58] NAME="CentOS Linux"
[2025-07-28 01:12:58] VERSION="7 (Core)"
[2025-07-28 01:12:58] ID="centos"
[2025-07-28 01:12:58] ID_LIKE="rhel fedora"
[2025-07-28 01:12:58] VERSION_ID="7"
[2025-07-28 01:12:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:12:58] ANSI_COLOR="0;31"
[2025-07-28 01:12:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:12:58] HOME_URL="https://www.centos.org/"
[2025-07-28 01:12:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:12:58] 
[2025-07-28 01:12:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:12:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:12:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:12:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:12:58] 
[2025-07-28 01:12:58] 2025-07-28 05:12:28,168 | INFO     | ***************************************
[2025-07-28 01:12:58] 2025-07-28 05:12:28,671 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-28 01:12:58] 2025-07-28 05:12:28,688 | INFO     | sufficient remaining disk space (128101384192 B)
[2025-07-28 01:12:58] 2025-07-28 05:12:28,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:12:58] 2025-07-28 05:12:28,689 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:12:58] 2025-07-28 05:12:28,689 | INFO     | update_server=False
[2025-07-28 01:12:58] 2025-07-28 05:12:28,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:12:58] 2025-07-28 05:12:28,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:12:58] 2025-07-28 05:12:28,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:12:58] 2025-07-28 05:12:28,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:12:58] 2025-07-28 05:12:28,690 | INFO     | aborting loop
[2025-07-28 01:12:58] 2025-07-28 05:12:28,769 | INFO     | all data control threads have been joined
[2025-07-28 01:12:58] 2025-07-28 05:12:29,305 | INFO     | all payload control threads have been joined
[2025-07-28 01:12:58] 2025-07-28 05:12:29,599 | INFO     | all job control threads have been joined
[2025-07-28 01:12:58] 2025-07-28 05:12:29,694 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:29,696 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:29,696 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:29,740 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:29,774 | INFO     | [data] control thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:29,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:12:58] 2025-07-28 05:12:30,070 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:30,311 | INFO     | [payload] control thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:30,344 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:30,391 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:30,605 | INFO     | [job] control thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:30,962 | INFO     | [job] validate thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:31,110 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:31,153 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:31,169 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:31,917 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:32,696 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:12:58] 2025-07-28 05:12:33,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140446865303360)>', '<ExcThread(monitor, started 140446059702016)>']
[2025-07-28 01:12:58] 2025-07-28 05:12:38,552 | INFO     | all workflow threads have been joined
[2025-07-28 01:12:58] 2025-07-28 05:12:38,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:12:58] 2025-07-28 05:12:38,553 | INFO     | traces error code: 0
[2025-07-28 01:12:58] 2025-07-28 05:12:38,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:12:58] 2025-07-28 05:12:58,619 | INFO     | PID=3404522 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:12:58] 2025-07-28 05:12:58,619 | INFO     | .. there are 5 such processes running
[2025-07-28 01:12:58] 2025-07-28 05:12:58,619 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:12:58] 2025-07-28 05:12:58,619 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:12:58] 2025-07-28 05:12:58,619 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:12:58] 2025-07-28 05:12:58,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:12:58] 2025-07-28 05:12:58,619 | INFO     | [monitor] control thread has ended
[2025-07-28 01:12:58] 2025-07-28 05:12:58,694 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:12:58] 2025-07-28 05:12:58,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:12:58] 2025-07-28 05:12:58,700 [wrapper] pilotpid: 3404522
[2025-07-28 01:12:58] 2025-07-28 05:12:58,703 [wrapper] Pilot exit status: 0
[2025-07-28 01:12:58] 2025-07-28 05:12:58,711 [wrapper] pandaids: 6748187552
[2025-07-28 01:12:58] 2025-07-28 05:12:58,758 [wrapper] cleanup supervisor_pilot 3568033 3404523
[2025-07-28 01:12:58] 2025-07-28 05:12:58,761 [wrapper] Test setup, not cleaning
[2025-07-28 01:12:58] 2025-07-28 05:12:58,763 [wrapper] apfmon messages muted
[2025-07-28 01:12:58] 2025-07-28 05:12:58,765 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:12:58] 2025-07-28 05:12:58,767 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:12:58]  *** Error codes and diagnostics ***
[2025-07-28 01:12:58]     "exeErrorCode": 0,
[2025-07-28 01:12:58]     "exeErrorDiag": "",
[2025-07-28 01:12:58]     "pilotErrorCode": 0,
[2025-07-28 01:12:58]     "pilotErrorDiag": "",
[2025-07-28 01:12:58]  *** Listing of results directory ***
[2025-07-28 01:12:58] total 359104
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:58 pilot3.tar.gz
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 17:10 queuedata.json
[2025-07-28 01:12:58] -rwx------. 1 boincer umatlas     36292 Jul 27 17:10 runpilot2-wrapper.sh
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas       100 Jul 28 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:12:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 00:13 run_atlas
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas       105 Jul 28 00:13 job.xml
[2025-07-28 01:12:58] -rw-r--r--. 2 boincer umatlas 145618770 Jul 28 00:13 EVNT.45743347._002408.pool.root.1
[2025-07-28 01:12:58] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 00:13 shared
[2025-07-28 01:12:58] -rw-r--r--. 2 boincer umatlas    542904 Jul 28 00:13 input.tar.gz
[2025-07-28 01:12:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 00:13 start_atlas.sh
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas         0 Jul 28 00:13 boinc_lockfile
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas      2563 Jul 28 00:13 pandaJob.out
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas    980117 Jul 28 00:13 agis_schedconf.cvmfs.json
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas   1593052 Jul 28 00:13 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:12:58] drwx------. 4 boincer umatlas      4096 Jul 28 00:13 pilot3
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas      6945 Jul 28 01:00 init_data.xml
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas 216887784 Jul 28 01:11 HITS.45743349._055638.pool.root.1
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas       530 Jul 28 01:11 boinc_task_state.xml
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas        95 Jul 28 01:12 pilot_heartbeat.json
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas      1025 Jul 28 01:12 memory_monitor_summary.json
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas    309504 Jul 28 01:12 log.45743349._055638.job.log.tgz.1
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas      7761 Jul 28 01:12 heartbeat.json
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:12 boinc_mmap_file
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:12 wrapper_checkpoint.txt
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas       822 Jul 28 01:12 pilotlog.txt
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas    358801 Jul 28 01:12 log.45743349._055638.job.log.1
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas       357 Jul 28 01:12 output.list
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:12 runtime_log
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas    686080 Jul 28 01:12 result.tar.gz
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas      8655 Jul 28 01:12 runtime_log.err
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas       650 Jul 28 01:12 df4KDm6oN07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvTWLDm4GqcWm.diag
[2025-07-28 01:12:58] -rw-r--r--. 1 boincer umatlas     21680 Jul 28 01:12 stderr.txt
[2025-07-28 01:12:58] HITS file was successfully produced:
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas 216887784 Jul 28 01:11 shared/HITS.pool.root.1
[2025-07-28 01:12:58]  *** Contents of shared directory: ***
[2025-07-28 01:12:58] total 355244
[2025-07-28 01:12:58] -rw-r--r--. 2 boincer umatlas 145618770 Jul 28 00:13 ATLAS.root_0
[2025-07-28 01:12:58] -rw-r--r--. 2 boincer umatlas    542904 Jul 28 00:13 input.tar.gz
[2025-07-28 01:12:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 00:13 start_atlas.sh
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas 216887784 Jul 28 01:11 HITS.pool.root.1
[2025-07-28 01:12:58] -rw-------. 1 boincer umatlas    686080 Jul 28 01:12 result.tar.gz
01:13:00 (3400933): run_atlas exited; CPU time 25344.891546
01:13:00 (3400933): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN