Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-28 01:04:36 (27968): Detected: vboxwrapper 26206
2025-07-28 01:04:36 (27968): Detected: BOINC client v8.0.2
2025-07-28 01:04:37 (27968): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-07-28 01:04:37 (27968): Successfully copied 'init_data.xml' to the shared directory.
2025-07-28 01:04:37 (27968): Create VM. (boinc_a21560108a5fd17f, slot#1)
2025-07-28 01:04:38 (27968): Setting Memory Size for VM. (4800MB)
2025-07-28 01:04:38 (27968): Setting CPU Count for VM. (8)
2025-07-28 01:04:39 (27968): Setting Chipset Options for VM.
2025-07-28 01:04:39 (27968): Setting Graphics Controller Options for VM.
2025-07-28 01:04:39 (27968): Setting Boot Options for VM.
2025-07-28 01:04:39 (27968): Setting Network Configuration for NAT.
2025-07-28 01:04:40 (27968): Enabling VM Network Access.
2025-07-28 01:04:40 (27968): Disabling USB Support for VM.
2025-07-28 01:04:40 (27968): Disabling COM Port Support for VM.
2025-07-28 01:04:40 (27968): Disabling LPT Port Support for VM.
2025-07-28 01:04:41 (27968): Disabling Audio Support for VM.
2025-07-28 01:04:41 (27968): Disabling Clipboard Support for VM.
2025-07-28 01:04:41 (27968): Disabling Drag and Drop Support for VM.
2025-07-28 01:04:41 (27968): Adding storage controller(s) to VM.
2025-07-28 01:04:42 (27968): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-28 01:04:45 (27968): Adding VirtualBox Guest Additions to VM.
2025-07-28 01:04:45 (27968): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-28 01:04:45 (27968): forwarding host port 50704 to guest port 80
2025-07-28 01:04:45 (27968): Enabling remote desktop for VM.
2025-07-28 01:04:46 (27968): Required extension pack not installed, remote desktop not enabled.
2025-07-28 01:04:46 (27968): Enabling shared directory for VM.
2025-07-28 01:04:46 (27968): Starting VM using VBoxManage interface. (boinc_a21560108a5fd17f, slot#1)
2025-07-28 01:04:51 (27968): Successfully started VM. (PID = '25856')
2025-07-28 01:04:51 (27968): Reporting VM Process ID to BOINC.
2025-07-28 01:04:51 (27968): Guest Log: BIOS: VirtualBox 7.0.6
2025-07-28 01:04:51 (27968): Guest Log: CPUID EDX: 0x178bfbff
2025-07-28 01:04:51 (27968): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-28 01:04:51 (27968): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-28 01:04:51 (27968): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-28 01:04:51 (27968): Detected: Web Application Enabled (http://localhost:50704)
2025-07-28 01:04:51 (27968): Preference change detected
2025-07-28 01:04:51 (27968): Setting CPU throttle for VM. (100%)
2025-07-28 01:04:51 (27968): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-28 01:04:53 (27968): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-28 01:04:53 (27968): Guest Log: BIOS: Booting from Hard Disk...
2025-07-28 01:04:56 (27968): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-28 01:04:56 (27968): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-28 01:04:56 (27968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-28 01:05:03 (27968): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-28 01:05:03 (27968): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-28 01:05:07 (27968): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-28 01:05:07 (27968): Guest Log: 00:00:00.000117 main     Log opened 2025-07-28T01:05:05.823415000Z
2025-07-28 01:05:07 (27968): Guest Log: 00:00:00.000195 main     OS Product: Linux
2025-07-28 01:05:07 (27968): Guest Log: 00:00:00.000228 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-28 01:05:07 (27968): Guest Log: 00:00:00.000254 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-28 01:05:07 (27968): Guest Log: 00:00:00.000277 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-28 01:05:07 (27968): Guest Log: 00:00:00.000278 main     Process ID: 1367
2025-07-28 01:05:07 (27968): Guest Log: 00:00:00.000278 main     Package type: LINUX_64BITS_GENERIC
2025-07-28 01:05:07 (27968): Guest Log: 00:00:00.000772 main     5.2.32 r132073 started. Verbose level = 0
2025-07-28 01:05:07 (27968): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-28 01:05:07 (27968): Guest Log: [INFO] Mounting shared directory
2025-07-28 01:05:07 (27968): Guest Log: [INFO] Checking for init_data.xml
2025-07-28 01:05:14 (27968): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-28 01:05:14 (27968): Guest Log: [INFO] Detected branch: prod
2025-07-28 01:05:15 (27968): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-28 01:05:15 (27968): Guest Log: Copying input files
2025-07-28 01:05:16 (27968): Guest Log: Copied input files into RunAtlas.
2025-07-28 01:05:16 (27968): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-28 01:05:16 (27968): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-28 01:05:16 (27968): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-28 01:05:16 (27968): Guest Log: Further information can be found at the LHC@home message board.
2025-07-28 01:05:17 (27968): Guest Log: 00:00:10.003879 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 698 213 000ns (GuestNow=1 753 682 716 524 155 000 ns GuestLast=1 753 664 705 825 942 000 ns fSetTimeLastLoop=true )
2025-07-28 01:05:32 (27968): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-28 01:05:33 (27968): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-28 01:05:33 (27968): Guest Log: 2.6.3.0 1651 0 32188 148838 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-28 01:05:33 (27968): Guest Log: copied the webapp to /var/www
2025-07-28 01:05:33 (27968): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-28 01:05:33 (27968): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-28 01:05:34 (27968): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-28 01:05:34 (27968): Guest Log:  *** Starting ATLAS job. (PandaID=6748387985 taskID=45743349) ***
2025-07-28 02:10:47 (27968): VM state change detected. (old = 'running', new = 'paused')
2025-07-28 02:11:07 (27968): VM state change detected. (old = 'paused', new = 'running')
2025-07-28 02:22:17 (27968): Guest Log:  *** Job finished ***
2025-07-28 02:22:17 (27968): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:44,041 | INFO     | all workflow threads have been joined
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:44,041 | INFO     | end of generic workflow (traces error code: 0)
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:44,042 | INFO     | traces error code: 0
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:44,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,608 | INFO     | PID=6005 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,609 | INFO     | found 0 job(s) in 20 queues
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,609 | INFO     | [monitor] control thread has ended
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,676 [wrapper] ==== pilot stdout END ====
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,680 [wrapper] ==== wrapper stdout RESUME ====
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,685 [wrapper] pilotpid: 6005
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,689 [wrapper] Pilot exit status: 0
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,805 [wrapper] pandaids: 6748387985
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,837 [wrapper] cleanup supervisor_pilot 25071 6006
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,841 [wrapper] Test setup, not cleaning
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,845 [wrapper] apfmon messages muted
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,850 [wrapper] ==== wrapper stdout END ====
2025-07-28 02:22:17 (27968): Guest Log: 2025-07-28 07:21:56,854 [wrapper] ==== wrapper stderr END ====
2025-07-28 02:22:17 (27968): Guest Log:  *** Error codes and diagnostics ***
2025-07-28 02:22:17 (27968): Guest Log:     "exeErrorCode": 0,
2025-07-28 02:22:17 (27968): Guest Log:     "exeErrorDiag": "",
2025-07-28 02:22:17 (27968): Guest Log:     "pilotErrorCode": 0,
2025-07-28 02:22:17 (27968): Guest Log:     "pilotErrorDiag": "",
2025-07-28 02:22:17 (27968): Guest Log:  *** Listing of results directory ***
2025-07-28 02:22:17 (27968): Guest Log: total 211364
2025-07-28 02:22:17 (27968): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 28 01:42 pilot3.tar.gz
2025-07-28 02:22:17 (27968): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 28 01:47 queuedata.json
2025-07-28 02:22:17 (27968): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 28 01:47 runpilot2-wrapper.sh
2025-07-28 02:22:17 (27968): Guest Log: -rwxr-xr-x. 1 atlas atlas     12044 Jul 28 06:05 init_data.xml
2025-07-28 02:22:17 (27968): Guest Log: -rwxr-xr-x. 1 atlas atlas    542889 Jul 28 06:05 input.tar.gz
2025-07-28 02:22:17 (27968): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 28 06:05 start_atlas.sh
2025-07-28 02:22:17 (27968): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 28 06:05 EVNT.45743347._002993.pool.root.1 -> /data/./ATLAS.root_0
2025-07-28 02:22:17 (27968): Guest Log: -rw-r--r--. 1 atlas atlas      2572 Jul 28 06:05 pandaJob.out
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas    980125 Jul 28 06:06 agis_schedconf.cvmfs.json
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 28 06:06 agis_ddmendpoints.agis.ALL.json
2025-07-28 02:22:17 (27968): Guest Log: drwx------. 4 atlas atlas      4096 Jul 28 06:06 pilot3
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas 211248591 Jul 28 07:20 HITS.45743349._055966.pool.root.1
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas      1029 Jul 28 07:21 memory_monitor_summary.json
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas    293519 Jul 28 07:21 log.45743349._055966.job.log.tgz.1
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas      7815 Jul 28 07:21 heartbeat.json
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas        95 Jul 28 07:21 pilot_heartbeat.json
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas       744 Jul 28 07:21 pilotlog.txt
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas    397456 Jul 28 07:21 log.45743349._055966.job.log.1
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas       357 Jul 28 07:21 output.list
2025-07-28 02:22:17 (27968): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 28 07:21 runtime_log
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas    706560 Jul 28 07:21 result.tar.gz
2025-07-28 02:22:17 (27968): Guest Log: -rw-r--r--. 1 atlas atlas      8614 Jul 28 07:21 runtime_log.err
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas       660 Jul 28 07:21 n3gLDm28R07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfZWLDm4bdorn.diag
2025-07-28 02:22:17 (27968): Guest Log: Looking for outputfile HITS.45743349._055966.pool.root.1
2025-07-28 02:22:17 (27968): Guest Log: HITS file was successfully produced
2025-07-28 02:22:17 (27968): Guest Log: -rw-------. 1 atlas atlas 211248591 Jul 28 07:20 /home/atlas/RunAtlas/HITS.45743349._055966.pool.root.1
2025-07-28 02:22:18 (27968): Guest Log: Successfully finished the ATLAS job!
2025-07-28 02:22:18 (27968): Guest Log: Copying the results back to the shared directory!
2025-07-28 02:22:18 (27968): Guest Log:  *** Contents of shared directory: ***
2025-07-28 02:22:18 (27968): Guest Log: total 351508
2025-07-28 02:22:18 (27968): Guest Log: -rwxrwxrwx. 1 root root 147408768 Jul 28 06:04 ATLAS.root_0
2025-07-28 02:22:18 (27968): Guest Log: -rwxrwxrwx. 1 root root 211248591 Jul 28  2025 HITS.pool.root.1
2025-07-28 02:22:18 (27968): Guest Log: -rwxrwxrwx. 1 root root     12044 Jul 28 06:04 init_data.xml
2025-07-28 02:22:18 (27968): Guest Log: -rwxrwxrwx. 1 root root    542889 Jul 28 04:08 input.tar.gz
2025-07-28 02:22:18 (27968): Guest Log: -rwxrwxrwx. 1 root root    706560 Jul 28  2025 result.tar.gz
2025-07-28 02:22:18 (27968): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 28 04:08 start_atlas.sh
2025-07-28 02:22:18 (27968): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-28 02:22:18 (27968): VM Completion File Detected.
2025-07-28 02:22:18 (27968): Powering off VM.
2025-07-28 02:22:19 (27968): Successfully stopped VM.
2025-07-28 02:22:19 (27968): Deregistering VM. (boinc_a21560108a5fd17f, slot#1)
2025-07-28 02:22:19 (27968): Removing network bandwidth throttle group from VM.
2025-07-28 02:22:19 (27968): Removing VM from VirtualBox.
02:22:25 (27968): called boinc_finish(0)

</stderr_txt>
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