Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:17:13 (1210837): wrapper (7.7.26015): starting
01:17:13 (1210837): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 01:17:13] Arguments: --nthreads 12
[2025-07-28 01:17:13] Threads: 12
[2025-07-28 01:17:13] Checking for CVMFS
[2025-07-28 01:17:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 01:17:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 01:17:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 01:17:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 01:17:13] 2.13.0.0 3608313 19373 288628 148837 1 64 17856113 32935937 10332 16776704 0 49521379 99.718 71119241 26991 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 01:17:13] CVMFS is ok
[2025-07-28 01:17:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 01:17:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 01:17:14] Further information can be found at the LHC@home message board.
[2025-07-28 01:17:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 01:17:14] Checking for apptainer binary...
[2025-07-28 01:17:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 01:17:14] Running /usr/bin/apptainer --version
[2025-07-28 01:17:14] apptainer version 1.4.1-1.el9
[2025-07-28 01:17:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 01:17:14] c6-6-39-3.aglt2.org
[2025-07-28 01:17:14] apptainer works
[2025-07-28 01:17:14] Set ATHENA_PROC_NUMBER=12
[2025-07-28 01:17:14] Set ATHENA_CORE_NUMBER=12
[2025-07-28 01:17:14] Starting ATLAS job with PandaID=6748388133
[2025-07-28 01:17:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 02:46:02]  *** The last 200 lines of the pilot log: ***
[2025-07-28 02:46:02]  lfn=log.45743349._056083.job.log.tgz.1
[2025-07-28 02:46:02]  mtime=0
[2025-07-28 02:46:02]  protocol_id=None
[2025-07-28 02:46:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 02:46:02]  replicas=None
[2025-07-28 02:46:02]  scope=mc23_13p6TeV
[2025-07-28 02:46:02]  status=None
[2025-07-28 02:46:02]  status_code=0
[2025-07-28 02:46:02]  storage_token=
[2025-07-28 02:46:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748388133/log.45743349._056083.job.log.tgz.1
[2025-07-28 02:46:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/51/log.45743349._056083.job.log.tgz.1
[2025-07-28 02:46:02]  workdir=None
[2025-07-28 02:46:02] ]
[2025-07-28 02:46:02] 2025-07-28 06:45:22,062 | INFO     | transferring file log.45743349._056083.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748388133/log.45743349._056083.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 02:46:02] 2025-07-28 06:45:22,062 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748388133/log.45743349._056083.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._056083.job
[2025-07-28 02:46:02] 2025-07-28 06:45:22,089 | INFO     | adding to output.list: log.45743349._056083.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/51/log.45743349._056083.job.log.tg
[2025-07-28 02:46:02] 2025-07-28 06:45:22,090 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 02:46:02] 2025-07-28 06:45:22,090 | INFO     | summary of transferred files:
[2025-07-28 02:46:02] 2025-07-28 06:45:22,091 | INFO     |  -- lfn=log.45743349._056083.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 02:46:02] 2025-07-28 06:45:22,091 | INFO     | stage-out finished correctly
[2025-07-28 02:46:02] 2025-07-28 06:45:22,189 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 02:46:02] 2025-07-28 06:45:22,619 | INFO     | monitor loop #377: job 0:6748388133 is in state 'finished'
[2025-07-28 02:46:02] 2025-07-28 06:45:22,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 02:46:02] 2025-07-28 06:45:23,877 | INFO     | job 6748388133 has state=finished
[2025-07-28 02:46:02] 2025-07-28 06:45:23,877 | INFO     | preparing for final server update for job 6748388133 in state='finished'
[2025-07-28 02:46:02] 2025-07-28 06:45:23,878 | INFO     | this job has now completed (state=finished)
[2025-07-28 02:46:02] 2025-07-28 06:45:23,878 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 02:46:02] 2025-07-28 06:45:23,878 | INFO     | log transfer has been attempted: DONE
[2025-07-28 02:46:02] 2025-07-28 06:45:23,878 | INFO     | job 6748388133 has finished - writing final server update
[2025-07-28 02:46:02] 2025-07-28 06:45:23,879 | INFO     | total number of processed events: 400 (read)
[2025-07-28 02:46:02] 2025-07-28 06:45:23,879 | INFO     | executing command: lscpu
[2025-07-28 02:46:02] 2025-07-28 06:45:23,939 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 02:46:02] 2025-07-28 06:45:25,124 | INFO     | monitor loop #378: job 0:6748388133 is in state 'finished'
[2025-07-28 02:46:02] 2025-07-28 06:45:25,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 02:46:02] 2025-07-28 06:45:27,627 | INFO     | monitor loop #379: job 0:6748388133 is in state 'finished'
[2025-07-28 02:46:02] 2025-07-28 06:45:27,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 02:46:02] 2025-07-28 06:45:29,638 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 02:46:02] 2025-07-28 06:45:29,660 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2776.4692499999996
[2025-07-28 02:46:02] 2025-07-28 06:45:29,673 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748388133/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:46:02] 2025-07-28 06:45:29,674 | INFO     | extracted standard info from prmon json
[2025-07-28 02:46:02] 2025-07-28 06:45:29,674 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 02:46:02] 2025-07-28 06:45:29,674 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 02:46:02] 2025-07-28 06:45:29,674 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 02:46:02] 2025-07-28 06:45:29,674 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 02:46:02] 2025-07-28 06:45:29,676 | INFO     | fitting pss+swap vs Time
[2025-07-28 02:46:02] 2025-07-28 06:45:29,677 | INFO     | sum of square deviations: 152857095.94936734
[2025-07-28 02:46:02] 2025-07-28 06:45:29,677 | INFO     | sum of deviations: -17372680761.468353
[2025-07-28 02:46:02] 2025-07-28 06:45:29,677 | INFO     | mean x: 1753682566.0253165
[2025-07-28 02:46:02] 2025-07-28 06:45:29,678 | INFO     | mean y: 2569335.734177215
[2025-07-28 02:46:02] 2025-07-28 06:45:29,678 | INFO     | -- intersect: 199314005859.4409
[2025-07-28 02:46:02] 2025-07-28 06:45:29,678 | INFO     | intersect: 199314005859.4409
[2025-07-28 02:46:02] 2025-07-28 06:45:29,678 | INFO     | chi2: 0.21443910734764388
[2025-07-28 02:46:02] 2025-07-28 06:45:29,678 | INFO     | -- intersect: 199314005859.4409
[2025-07-28 02:46:02] 2025-07-28 06:45:29,678 | INFO     | current memory leak: -113.65 B/s (using 79 data points, chi2=0.21)
[2025-07-28 02:46:02] 2025-07-28 06:45:29,678 | INFO     | could have reported an average CPU frequency of 2673 MHz (6 samples)
[2025-07-28 02:46:02] 2025-07-28 06:45:29,679 | INFO     | ..............................
[2025-07-28 02:46:02] 2025-07-28 06:45:29,679 | INFO     | . Timing measurements:
[2025-07-28 02:46:02] 2025-07-28 06:45:29,679 | INFO     | . get job = 0 s
[2025-07-28 02:46:02] 2025-07-28 06:45:29,679 | INFO     | . initial setup = 3 s
[2025-07-28 02:46:02] 2025-07-28 06:45:29,679 | INFO     | . payload setup = 9 s
[2025-07-28 02:46:02] 2025-07-28 06:45:29,679 | INFO     | . stage-in = 0 s
[2025-07-28 02:46:02] 2025-07-28 06:45:29,679 | INFO     | . payload execution = 5241 s
[2025-07-28 02:46:02] 2025-07-28 06:45:29,679 | INFO     | . stage-out = 0 s
[2025-07-28 02:46:02] 2025-07-28 06:45:29,679 | INFO     | . log creation = 0 s
[2025-07-28 02:46:02] 2025-07-28 06:45:29,679 | INFO     | ..............................
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | 
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | job summary report
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | --------------------------------------------------
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | PanDA job id: 6748388133
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | task id: 45743349
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | errors: (none)
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | pilot state: finished 
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | transexitcode: 0
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | exeerrorcode: 0
[2025-07-28 02:46:02] 2025-07-28 06:45:30,071 | INFO     | exeerrordiag: 
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | exitcode: 0
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | exitmsg: OK
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | cpuconsumptiontime: 52085 s
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | nevents: 400
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | neventsw: 0
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | pid: 1222866
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | pgrp: 1222866
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | corecount: 12
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | event service: False
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | sizes: {0: 2397313, 1: 2397512, 6: 2397774, 11: 2397802, 5255: 2424104, 5256: 2433286, 5264: 2433424}
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | --------------------------------------------------
[2025-07-28 02:46:02] 2025-07-28 06:45:30,072 | INFO     | 
[2025-07-28 02:46:02] 2025-07-28 06:45:30,073 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 02:46:02] 2025-07-28 06:45:30,097 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,099 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,099 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 02:46:02] 2025-07-28 06:45:30,099 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,099 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 02:46:02] 2025-07-28 06:45:30,099 | INFO     | job 6748388133 has completed (purged errors)
[2025-07-28 02:46:02] 2025-07-28 06:45:30,099 | INFO     | overall cleanup function is called
[2025-07-28 02:46:02] 2025-07-28 06:45:31,106 | INFO     | --- collectZombieJob: --- 10, [1222866]
[2025-07-28 02:46:02] 2025-07-28 06:45:31,107 | INFO     | zombie collector waiting for pid 1222866
[2025-07-28 02:46:02] 2025-07-28 06:45:31,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 02:46:02] 2025-07-28 06:45:31,107 | INFO     | collected zombie processes
[2025-07-28 02:46:02] 2025-07-28 06:45:31,107 | INFO     | will attempt to kill all subprocesses of pid=1222866
[2025-07-28 02:46:02] 2025-07-28 06:45:31,375 | INFO     | process IDs to be killed: [1222866] (in reverse order)
[2025-07-28 02:46:02] 2025-07-28 06:45:31,478 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 02:46:02] 2025-07-28 06:45:31,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 02:46:02] 2025-07-28 06:45:31,495 | INFO     | did not find any defunct processes belonging to 1222866
[2025-07-28 02:46:02] 2025-07-28 06:45:31,511 | INFO     | did not find any defunct processes belonging to 1222866
[2025-07-28 02:46:02] 2025-07-28 06:45:31,512 | INFO     | ready for new job
[2025-07-28 02:46:02] 2025-07-28 06:45:31,512 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 02:46:02] 2025-07-28 06:45:31,516 | INFO     | ***************************************
[2025-07-28 02:46:02] 2025-07-28 06:45:31,518 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 02:46:02] 2025-07-28 06:45:31,518 | INFO     | ***************************************
[2025-07-28 02:46:02] 2025-07-28 06:45:31,518 | INFO     | 
[2025-07-28 02:46:02] 2025-07-28 06:45:31,534 | INFO     | architecture information:
[2025-07-28 02:46:02] 2025-07-28 06:45:31,534 | INFO     | executing command: cat /etc/os-release
[2025-07-28 02:46:02] 2025-07-28 06:45:31,555 | INFO     | cat /etc/os-release:
[2025-07-28 02:46:02] NAME="CentOS Linux"
[2025-07-28 02:46:02] VERSION="7 (Core)"
[2025-07-28 02:46:02] ID="centos"
[2025-07-28 02:46:02] ID_LIKE="rhel fedora"
[2025-07-28 02:46:02] VERSION_ID="7"
[2025-07-28 02:46:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 02:46:02] ANSI_COLOR="0;31"
[2025-07-28 02:46:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 02:46:02] HOME_URL="https://www.centos.org/"
[2025-07-28 02:46:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 02:46:02] 
[2025-07-28 02:46:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 02:46:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 02:46:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 02:46:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 02:46:02] 
[2025-07-28 02:46:02] 2025-07-28 06:45:31,555 | INFO     | ***************************************
[2025-07-28 02:46:02] 2025-07-28 06:45:32,058 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 02:46:02] 2025-07-28 06:45:32,080 | INFO     | sufficient remaining disk space (73756835840 B)
[2025-07-28 02:46:02] 2025-07-28 06:45:32,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 02:46:02] 2025-07-28 06:45:32,081 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 02:46:02] 2025-07-28 06:45:32,081 | INFO     | update_server=False
[2025-07-28 02:46:02] 2025-07-28 06:45:32,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 02:46:02] 2025-07-28 06:45:32,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:46:02] 2025-07-28 06:45:32,081 | INFO     | aborting loop
[2025-07-28 02:46:02] 2025-07-28 06:45:32,372 | INFO     | all job control threads have been joined
[2025-07-28 02:46:02] 2025-07-28 06:45:32,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 02:46:02] 2025-07-28 06:45:32,754 | INFO     | all data control threads have been joined
[2025-07-28 02:46:02] 2025-07-28 06:45:32,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 02:46:02] 2025-07-28 06:45:33,086 | INFO     | [job] retrieve thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:33,087 | INFO     | [job] job monitor thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:33,134 | INFO     | all payload control threads have been joined
[2025-07-28 02:46:02] 2025-07-28 06:45:33,278 | INFO     | [payload] validate_post thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:33,300 | INFO     | [job] validate thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:33,376 | INFO     | [job] control thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:33,678 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:33,759 | INFO     | [data] control thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:33,825 | INFO     | [payload] failed_post thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:34,002 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:34,139 | INFO     | [payload] control thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:34,178 | INFO     | [data] copytool_in thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:34,499 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:34,715 | INFO     | [data] copytool_out thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:34,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:46:02] 2025-07-28 06:45:35,783 | INFO     | [job] queue monitor thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:36,823 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:42,832 | INFO     | job.realtimelogging is not enabled
[2025-07-28 02:46:02] 2025-07-28 06:45:43,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 02:46:02] 2025-07-28 06:45:43,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687320524608)>', '<ExcThread(monitor, started 140686678550272)>']
[2025-07-28 02:46:02] 2025-07-28 06:45:48,947 | INFO     | all workflow threads have been joined
[2025-07-28 02:46:02] 2025-07-28 06:45:48,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 02:46:02] 2025-07-28 06:45:48,948 | INFO     | traces error code: 0
[2025-07-28 02:46:02] 2025-07-28 06:45:48,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 02:46:02] 2025-07-28 06:46:02,440 | INFO     | PID=1215334 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:46:02] 2025-07-28 06:46:02,441 | INFO     | .. there are 13 such processes running
[2025-07-28 02:46:02] 2025-07-28 06:46:02,442 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 02:46:02] 2025-07-28 06:46:02,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 02:46:02] 2025-07-28 06:46:02,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 02:46:02] 2025-07-28 06:46:02,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 02:46:02] 2025-07-28 06:46:02,442 | INFO     | [monitor] control thread has ended
[2025-07-28 02:46:02] 2025-07-28 06:46:02,652 [wrapper] ==== pilot stdout END ====
[2025-07-28 02:46:02] 2025-07-28 06:46:02,655 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 02:46:02] 2025-07-28 06:46:02,659 [wrapper] pilotpid: 1215334
[2025-07-28 02:46:02] 2025-07-28 06:46:02,662 [wrapper] Pilot exit status: 0
[2025-07-28 02:46:02] 2025-07-28 06:46:02,675 [wrapper] pandaids: 6748388133
[2025-07-28 02:46:02] 2025-07-28 06:46:02,739 [wrapper] cleanup supervisor_pilot 1443907 1215335
[2025-07-28 02:46:02] 2025-07-28 06:46:02,745 [wrapper] Test setup, not cleaning
[2025-07-28 02:46:02] 2025-07-28 06:46:02,750 [wrapper] apfmon messages muted
[2025-07-28 02:46:02] 2025-07-28 06:46:02,754 [wrapper] ==== wrapper stdout END ====
[2025-07-28 02:46:02] 2025-07-28 06:46:02,758 [wrapper] ==== wrapper stderr END ====
[2025-07-28 02:46:02]  *** Error codes and diagnostics ***
[2025-07-28 02:46:02]     "exeErrorCode": 0,
[2025-07-28 02:46:02]     "exeErrorDiag": "",
[2025-07-28 02:46:02]     "pilotErrorCode": 0,
[2025-07-28 02:46:02]     "pilotErrorDiag": "",
[2025-07-28 02:46:02]  *** Listing of results directory ***
[2025-07-28 02:46:02] total 355076
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 21:42 pilot3.tar.gz
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 21:47 queuedata.json
[2025-07-28 02:46:02] -rwx------. 1 boincer umatlas     36292 Jul 27 21:47 runpilot2-wrapper.sh
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas       100 Jul 28 01:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 02:46:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 01:17 run_atlas
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas       105 Jul 28 01:17 job.xml
[2025-07-28 02:46:02] -rw-r--r--. 2 boincer umatlas 149050917 Jul 28 01:17 EVNT.45743347._003001.pool.root.1
[2025-07-28 02:46:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 01:17 start_atlas.sh
[2025-07-28 02:46:02] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 01:17 shared
[2025-07-28 02:46:02] -rw-r--r--. 2 boincer umatlas    542895 Jul 28 01:17 input.tar.gz
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas         0 Jul 28 01:17 boinc_lockfile
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas      2572 Jul 28 01:17 pandaJob.out
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas    980125 Jul 28 01:17 agis_schedconf.cvmfs.json
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas   1593052 Jul 28 01:17 agis_ddmendpoints.agis.ALL.json
[2025-07-28 02:46:02] drwx------. 4 boincer umatlas      4096 Jul 28 01:17 pilot3
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas      6840 Jul 28 02:40 init_data.xml
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas 208928925 Jul 28 02:44 HITS.45743349._056083.pool.root.1
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas       529 Jul 28 02:44 boinc_task_state.xml
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas      1037 Jul 28 02:45 memory_monitor_summary.json
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas    364474 Jul 28 02:45 log.45743349._056083.job.log.tgz.1
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas      7824 Jul 28 02:45 heartbeat.json
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas        27 Jul 28 02:45 wrapper_checkpoint.txt
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 02:46 boinc_mmap_file
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas        95 Jul 28 02:46 pilot_heartbeat.json
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas       823 Jul 28 02:46 pilotlog.txt
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas    506408 Jul 28 02:46 log.45743349._056083.job.log.1
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas       357 Jul 28 02:46 output.list
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas       620 Jul 28 02:46 runtime_log
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas    890880 Jul 28 02:46 result.tar.gz
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 02:46 runtime_log.err
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas       654 Jul 28 02:46 PqtKDm28R07n9Rq4apOajLDm4fhM0noT9bVof3QYDmnB3KDmPBWPJo.diag
[2025-07-28 02:46:02] -rw-r--r--. 1 boincer umatlas     21677 Jul 28 02:46 stderr.txt
[2025-07-28 02:46:02] HITS file was successfully produced:
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas 208928925 Jul 28 02:44 shared/HITS.pool.root.1
[2025-07-28 02:46:02]  *** Contents of shared directory: ***
[2025-07-28 02:46:02] total 351020
[2025-07-28 02:46:02] -rw-r--r--. 2 boincer umatlas 149050917 Jul 28 01:17 ATLAS.root_0
[2025-07-28 02:46:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 01:17 start_atlas.sh
[2025-07-28 02:46:02] -rw-r--r--. 2 boincer umatlas    542895 Jul 28 01:17 input.tar.gz
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas 208928925 Jul 28 02:44 HITS.pool.root.1
[2025-07-28 02:46:02] -rw-------. 1 boincer umatlas    890880 Jul 28 02:46 result.tar.gz
02:46:04 (1210837): run_atlas exited; CPU time 52134.811061
02:46:04 (1210837): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN