Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:42:04 (2093880): wrapper (7.7.26015): starting
01:42:04 (2093880): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 01:42:04] Arguments: --nthreads 4
[2025-07-28 01:42:04] Threads: 4
[2025-07-28 01:42:04] Checking for CVMFS
[2025-07-28 01:42:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 01:42:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 01:42:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 01:42:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 01:42:05] 2.13.1.0 9317 971 53208 148837 1 188 1795201 4096001 6454 130560 0 5867112 99.886 702721 2377 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-28 01:42:05] CVMFS is ok
[2025-07-28 01:42:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 01:42:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-28 01:42:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-28 01:42:05] Further information can be found at the LHC@home message board.
[2025-07-28 01:42:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 01:42:05] Checking for apptainer binary...
[2025-07-28 01:42:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 01:42:05] Running /usr/bin/apptainer --version
[2025-07-28 01:42:05] apptainer version 1.4.1
[2025-07-28 01:42:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 01:42:05] linux-7950X
[2025-07-28 01:42:05] apptainer works
[2025-07-28 01:42:05] Set ATHENA_PROC_NUMBER=4
[2025-07-28 01:42:05] Set ATHENA_CORE_NUMBER=4
[2025-07-28 01:42:05] Starting ATLAS job with PandaID=6748418625
[2025-07-28 01:42:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 02:40:40]  *** The last 200 lines of the pilot log: ***
[2025-07-28 02:40:40]  lfn=log.45743349._056182.job.log.tgz.1
[2025-07-28 02:40:40]  mtime=0
[2025-07-28 02:40:40]  protocol_id=None
[2025-07-28 02:40:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 02:40:40]  replicas=None
[2025-07-28 02:40:40]  scope=mc23_13p6TeV
[2025-07-28 02:40:40]  status=None
[2025-07-28 02:40:40]  status_code=0
[2025-07-28 02:40:40]  storage_token=
[2025-07-28 02:40:40]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6748418625/log.45743349._056182.job.log.tgz.1
[2025-07-28 02:40:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/b4/log.45743349._056182.job.log.tgz.1
[2025-07-28 02:40:40]  workdir=None
[2025-07-28 02:40:40] ]
[2025-07-28 02:40:40] 2025-07-28 06:40:04,278 | INFO     | transferring file log.45743349._056182.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6748418625/log.45743349._056182.job.log.tgz.1 to /var/lib/boinc
[2025-07-28 02:40:40] 2025-07-28 06:40:04,279 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6748418625/log.45743349._056182.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.457433
[2025-07-28 02:40:40] 2025-07-28 06:40:04,291 | INFO     | adding to output.list: log.45743349._056182.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/b4/log.45743349._056182.job.log.tg
[2025-07-28 02:40:40] 2025-07-28 06:40:04,291 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 02:40:40] 2025-07-28 06:40:04,291 | INFO     | summary of transferred files:
[2025-07-28 02:40:40] 2025-07-28 06:40:04,291 | INFO     |  -- lfn=log.45743349._056182.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 02:40:40] 2025-07-28 06:40:04,291 | INFO     | stage-out finished correctly
[2025-07-28 02:40:40] 2025-07-28 06:40:05,118 | INFO     | monitor loop #269: job 0:6748418625 is in state 'finished'
[2025-07-28 02:40:40] 2025-07-28 06:40:05,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 02:40:40] 2025-07-28 06:40:05,232 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 02:40:40] 2025-07-28 06:40:06,289 | INFO     | PID=2097646 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:40:40] 2025-07-28 06:40:06,289 | INFO     | .. there are 6 such processes running
[2025-07-28 02:40:40] 2025-07-28 06:40:06,327 | INFO     | job 6748418625 has state=finished
[2025-07-28 02:40:40] 2025-07-28 06:40:06,327 | INFO     | preparing for final server update for job 6748418625 in state='finished'
[2025-07-28 02:40:40] 2025-07-28 06:40:06,327 | INFO     | this job has now completed (state=finished)
[2025-07-28 02:40:40] 2025-07-28 06:40:06,327 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 02:40:40] 2025-07-28 06:40:06,327 | INFO     | log transfer has been attempted: DONE
[2025-07-28 02:40:40] 2025-07-28 06:40:06,327 | INFO     | job 6748418625 has finished - writing final server update
[2025-07-28 02:40:40] 2025-07-28 06:40:06,327 | INFO     | total number of processed events: 400 (read)
[2025-07-28 02:40:40] 2025-07-28 06:40:06,328 | INFO     | executing command: lscpu
[2025-07-28 02:40:40] 2025-07-28 06:40:06,348 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 02:40:40] 2025-07-28 06:40:07,620 | INFO     | monitor loop #270: job 0:6748418625 is in state 'finished'
[2025-07-28 02:40:40] 2025-07-28 06:40:07,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 02:40:40] 2025-07-28 06:40:08,513 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 02:40:40] 2025-07-28 06:40:08,516 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4731.424562499999
[2025-07-28 02:40:40] 2025-07-28 06:40:08,519 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6748418625/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:40:40] 2025-07-28 06:40:08,519 | INFO     | extracted standard info from prmon json
[2025-07-28 02:40:40] 2025-07-28 06:40:08,519 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 02:40:40] 2025-07-28 06:40:08,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 02:40:40] 2025-07-28 06:40:08,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 02:40:40] 2025-07-28 06:40:08,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 02:40:40] 2025-07-28 06:40:08,520 | INFO     | fitting pss+swap vs Time
[2025-07-28 02:40:40] 2025-07-28 06:40:08,520 | INFO     | sum of square deviations: 38744912.5
[2025-07-28 02:40:40] 2025-07-28 06:40:08,520 | INFO     | sum of deviations: -3064632527.5
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | mean x: 1753683150.5
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | mean y: 2427949.3
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | -- intersect: 138714689228.78998
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | intersect: 138714689228.78998
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | chi2: 0.024339350708853874
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | -- intersect: 138714689228.78998
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | current memory leak: -79.10 B/s (using 50 data points, chi2=0.02)
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | could have reported an average CPU frequency of 4532 MHz (5 samples)
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | ..............................
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | . Timing measurements:
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | . get job = 0 s
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | . initial setup = 2 s
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | . payload setup = 3 s
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | . stage-in = 0 s
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | . payload execution = 3452 s
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | . stage-out = 0 s
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | . log creation = 0 s
[2025-07-28 02:40:40] 2025-07-28 06:40:08,521 | INFO     | ..............................
[2025-07-28 02:40:40] 2025-07-28 06:40:08,568 | INFO     | 
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | job summary report
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | --------------------------------------------------
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | PanDA job id: 6748418625
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | task id: 45743349
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | errors: (none)
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | pilot state: finished 
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | transexitcode: 0
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | exeerrorcode: 0
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | exeerrordiag: 
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | exitcode: 0
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | exitmsg: OK
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | cpuconsumptiontime: 13291 s
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | nevents: 400
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | neventsw: 0
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | pid: 2104346
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | pgrp: 2104346
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | corecount: 4
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | event service: False
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | sizes: {0: 2397204, 1: 2397459, 3: 2397721, 11: 2397749, 3459: 2432489, 3460: 2432489, 3463: 2432843}
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | --------------------------------------------------
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | 
[2025-07-28 02:40:40] 2025-07-28 06:40:08,569 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-07-28 02:40:40] 2025-07-28 06:40:08,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,582 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | job 6748418625 has completed (purged errors)
[2025-07-28 02:40:40] 2025-07-28 06:40:08,583 | INFO     | overall cleanup function is called
[2025-07-28 02:40:40] 2025-07-28 06:40:09,588 | INFO     | --- collectZombieJob: --- 10, [2104346]
[2025-07-28 02:40:40] 2025-07-28 06:40:09,588 | INFO     | zombie collector waiting for pid 2104346
[2025-07-28 02:40:40] 2025-07-28 06:40:09,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 02:40:40] 2025-07-28 06:40:09,588 | INFO     | collected zombie processes
[2025-07-28 02:40:40] 2025-07-28 06:40:09,588 | INFO     | will attempt to kill all subprocesses of pid=2104346
[2025-07-28 02:40:40] 2025-07-28 06:40:09,667 | INFO     | process IDs to be killed: [2104346] (in reverse order)
[2025-07-28 02:40:40] 2025-07-28 06:40:09,707 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 02:40:40] 2025-07-28 06:40:09,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 02:40:40] 2025-07-28 06:40:09,710 | INFO     | did not find any defunct processes belonging to 2104346
[2025-07-28 02:40:40] 2025-07-28 06:40:09,713 | INFO     | did not find any defunct processes belonging to 2104346
[2025-07-28 02:40:40] 2025-07-28 06:40:09,713 | INFO     | ready for new job
[2025-07-28 02:40:40] 2025-07-28 06:40:09,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 02:40:40] 2025-07-28 06:40:09,714 | INFO     | ***************************************
[2025-07-28 02:40:40] 2025-07-28 06:40:09,714 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 02:40:40] 2025-07-28 06:40:09,714 | INFO     | ***************************************
[2025-07-28 02:40:40] 2025-07-28 06:40:09,714 | INFO     | 
[2025-07-28 02:40:40] 2025-07-28 06:40:09,715 | INFO     | architecture information:
[2025-07-28 02:40:40] 2025-07-28 06:40:09,715 | INFO     | executing command: cat /etc/os-release
[2025-07-28 02:40:40] 2025-07-28 06:40:09,725 | INFO     | cat /etc/os-release:
[2025-07-28 02:40:40] NAME="CentOS Linux"
[2025-07-28 02:40:40] VERSION="7 (Core)"
[2025-07-28 02:40:40] ID="centos"
[2025-07-28 02:40:40] ID_LIKE="rhel fedora"
[2025-07-28 02:40:40] VERSION_ID="7"
[2025-07-28 02:40:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 02:40:40] ANSI_COLOR="0;31"
[2025-07-28 02:40:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 02:40:40] HOME_URL="https://www.centos.org/"
[2025-07-28 02:40:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 02:40:40] 
[2025-07-28 02:40:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 02:40:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 02:40:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 02:40:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 02:40:40] 
[2025-07-28 02:40:40] 2025-07-28 06:40:09,725 | INFO     | ***************************************
[2025-07-28 02:40:40] 2025-07-28 06:40:10,228 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-07-28 02:40:40] 2025-07-28 06:40:10,239 | INFO     | sufficient remaining disk space (902980173824 B)
[2025-07-28 02:40:40] 2025-07-28 06:40:10,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 02:40:40] 2025-07-28 06:40:10,239 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 02:40:40] 2025-07-28 06:40:10,239 | INFO     | update_server=False
[2025-07-28 02:40:40] 2025-07-28 06:40:10,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 02:40:40] 2025-07-28 06:40:10,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:40:40] 2025-07-28 06:40:10,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 02:40:40] 2025-07-28 06:40:10,309 | INFO     | all data control threads have been joined
[2025-07-28 02:40:40] 2025-07-28 06:40:10,625 | INFO     | all job control threads have been joined
[2025-07-28 02:40:40] 2025-07-28 06:40:11,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:40:40] 2025-07-28 06:40:11,125 | INFO     | aborting loop
[2025-07-28 02:40:40] 2025-07-28 06:40:11,245 | INFO     | [job] retrieve thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:11,245 | INFO     | [job] queue monitor thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:11,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 02:40:40] 2025-07-28 06:40:11,310 | INFO     | [data] control thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:11,322 | INFO     | [payload] validate_post thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:11,612 | INFO     | all payload control threads have been joined
[2025-07-28 02:40:40] 2025-07-28 06:40:11,629 | INFO     | [job] control thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:12,130 | INFO     | [job] job monitor thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:12,236 | INFO     | [payload] failed_post thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:12,244 | INFO     | [data] copytool_out thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:12,275 | INFO     | [data] copytool_in thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:12,377 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:12,514 | INFO     | [job] validate thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:12,615 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:12,617 | INFO     | [payload] control thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:12,711 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:15,285 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:20,479 | INFO     | job.realtimelogging is not enabled
[2025-07-28 02:40:40] 2025-07-28 06:40:21,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 02:40:40] 2025-07-28 06:40:22,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134062929573696)>', '<ExcThread(monitor, started 134062169650944)>']
[2025-07-28 02:40:40] 2025-07-28 06:40:27,685 | INFO     | all workflow threads have been joined
[2025-07-28 02:40:40] 2025-07-28 06:40:27,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 02:40:40] 2025-07-28 06:40:27,685 | INFO     | traces error code: 0
[2025-07-28 02:40:40] 2025-07-28 06:40:27,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 02:40:40] 2025-07-28 06:40:40,454 | INFO     | PID=2097646 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:40:40] 2025-07-28 06:40:40,454 | INFO     | .. there are 6 such processes running
[2025-07-28 02:40:40] 2025-07-28 06:40:40,455 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 02:40:40] 2025-07-28 06:40:40,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 02:40:40] 2025-07-28 06:40:40,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 02:40:40] 2025-07-28 06:40:40,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 02:40:40] 2025-07-28 06:40:40,455 | INFO     | [monitor] control thread has ended
[2025-07-28 02:40:40] 2025-07-28 06:40:40,517 [wrapper] ==== pilot stdout END ====
[2025-07-28 02:40:40] 2025-07-28 06:40:40,519 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 02:40:40] 2025-07-28 06:40:40,521 [wrapper] pilotpid: 2097646
[2025-07-28 02:40:40] 2025-07-28 06:40:40,523 [wrapper] Pilot exit status: 0
[2025-07-28 02:40:40] 2025-07-28 06:40:40,528 [wrapper] pandaids: 6748418625
[2025-07-28 02:40:40] 2025-07-28 06:40:40,554 [wrapper] cleanup supervisor_pilot 2135943 2097647
[2025-07-28 02:40:40] 2025-07-28 06:40:40,556 [wrapper] Test setup, not cleaning
[2025-07-28 02:40:40] 2025-07-28 06:40:40,558 [wrapper] apfmon messages muted
[2025-07-28 02:40:40] 2025-07-28 06:40:40,559 [wrapper] ==== wrapper stdout END ====
[2025-07-28 02:40:40] 2025-07-28 06:40:40,561 [wrapper] ==== wrapper stderr END ====
[2025-07-28 02:40:40]  *** Error codes and diagnostics ***
[2025-07-28 02:40:40]     "exeErrorCode": 0,
[2025-07-28 02:40:40]     "exeErrorDiag": "",
[2025-07-28 02:40:40]     "pilotErrorCode": 0,
[2025-07-28 02:40:40]     "pilotErrorDiag": "",
[2025-07-28 02:40:40]  *** Listing of results directory ***
[2025-07-28 02:40:40] total 430600
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc    530466 Jul 27 23:07 pilot3.tar.gz
[2025-07-28 02:40:40] -rwx------ 1 boinc boinc     36292 Jul 27 23:32 runpilot2-wrapper.sh
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc      5112 Jul 27 23:32 queuedata.json
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc       100 Jul 28 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 02:40:40] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 01:42 run_atlas
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc       105 Jul 28 01:42 job.xml
[2025-07-28 02:40:40] -rw-r--r-- 2 boinc boinc 229306288 Jul 28 01:42 EVNT.45743347._002657.pool.root.1
[2025-07-28 02:40:40] -rw-r--r-- 2 boinc boinc     15095 Jul 28 01:42 start_atlas.sh
[2025-07-28 02:40:40] drwxrwx--x 2 boinc boinc      4096 Jul 28 01:42 shared
[2025-07-28 02:40:40] -rw-r--r-- 2 boinc boinc    542904 Jul 28 01:42 input.tar.gz
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc      9400 Jul 28 01:42 init_data.xml
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc         0 Jul 28 01:42 boinc_setup_complete
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc         0 Jul 28 01:42 boinc_lockfile
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc      2562 Jul 28 01:42 pandaJob.out
[2025-07-28 02:40:40] -rw------- 1 boinc boinc    980125 Jul 28 01:42 agis_schedconf.cvmfs.json
[2025-07-28 02:40:40] -rw------- 1 boinc boinc   1593052 Jul 28 01:42 agis_ddmendpoints.agis.ALL.json
[2025-07-28 02:40:40] drwx------ 4 boinc boinc      4096 Jul 28 01:42 pilot3
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc       529 Jul 28 02:39 boinc_task_state.xml
[2025-07-28 02:40:40] -rw------- 1 boinc boinc 206549585 Jul 28 02:39 HITS.45743349._056182.pool.root.1
[2025-07-28 02:40:40] -rw------- 1 boinc boinc      1023 Jul 28 02:40 memory_monitor_summary.json
[2025-07-28 02:40:40] -rw------- 1 boinc boinc    233721 Jul 28 02:40 log.45743349._056182.job.log.tgz.1
[2025-07-28 02:40:40] -rw------- 1 boinc boinc      7742 Jul 28 02:40 heartbeat.json
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc      8192 Jul 28 02:40 boinc_mmap_file
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc        27 Jul 28 02:40 wrapper_checkpoint.txt
[2025-07-28 02:40:40] -rw------- 1 boinc boinc       822 Jul 28 02:40 pilotlog.txt
[2025-07-28 02:40:40] -rw------- 1 boinc boinc        95 Jul 28 02:40 pilot_heartbeat.json
[2025-07-28 02:40:40] -rw------- 1 boinc boinc    366521 Jul 28 02:40 log.45743349._056182.job.log.1
[2025-07-28 02:40:40] -rw------- 1 boinc boinc       357 Jul 28 02:40 output.list
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc       620 Jul 28 02:40 runtime_log
[2025-07-28 02:40:40] -rw------- 1 boinc boinc    614400 Jul 28 02:40 result.tar.gz
[2025-07-28 02:40:40] -rw------- 1 boinc boinc       643 Jul 28 02:40 yoWMDmTmT07n9Rq4apOajLDm4fhM0noT9bVof3QYDmNC3KDmOd2mem.diag
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc      8726 Jul 28 02:40 runtime_log.err
[2025-07-28 02:40:40] -rw-r--r-- 1 boinc boinc     21782 Jul 28 02:40 stderr.txt
[2025-07-28 02:40:40] HITS file was successfully produced:
[2025-07-28 02:40:40] -rw------- 1 boinc boinc 206549585 Jul 28 02:39 shared/HITS.pool.root.1
[2025-07-28 02:40:40]  *** Contents of shared directory: ***
[2025-07-28 02:40:40] total 426800
[2025-07-28 02:40:40] -rw-r--r-- 2 boinc boinc 229306288 Jul 28 01:42 ATLAS.root_0
[2025-07-28 02:40:40] -rw-r--r-- 2 boinc boinc     15095 Jul 28 01:42 start_atlas.sh
[2025-07-28 02:40:40] -rw-r--r-- 2 boinc boinc    542904 Jul 28 01:42 input.tar.gz
[2025-07-28 02:40:40] -rw------- 1 boinc boinc 206549585 Jul 28 02:39 HITS.pool.root.1
[2025-07-28 02:40:40] -rw------- 1 boinc boinc    614400 Jul 28 02:40 result.tar.gz
02:40:42 (2093880): run_atlas exited; CPU time 13304.672404
02:40:42 (2093880): called boinc_finish(0)

</stderr_txt>
]]>

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