Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:13:19 (3322962): wrapper (7.7.26015): starting
01:13:19 (3322962): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 01:13:19] Arguments: --nthreads 12
[2025-07-28 01:13:19] Threads: 12
[2025-07-28 01:13:19] Checking for CVMFS
[2025-07-28 01:13:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 01:13:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 01:13:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 01:13:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 01:13:19] 2.13.0.0 633399 19368 318464 148836 3 293 30004525 32935937 8457 16776704 1 37938345 99.547 81161817 30928 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 01:13:19] CVMFS is ok
[2025-07-28 01:13:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 01:13:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 01:13:19] Further information can be found at the LHC@home message board.
[2025-07-28 01:13:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 01:13:19] Checking for apptainer binary...
[2025-07-28 01:13:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 01:13:19] Running /usr/bin/apptainer --version
[2025-07-28 01:13:19] apptainer version 1.4.1-1.el9
[2025-07-28 01:13:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 01:13:19] c6-6-39-1.aglt2.org
[2025-07-28 01:13:19] apptainer works
[2025-07-28 01:13:19] Set ATHENA_PROC_NUMBER=12
[2025-07-28 01:13:19] Set ATHENA_CORE_NUMBER=12
[2025-07-28 01:13:19] Starting ATLAS job with PandaID=6748417361
[2025-07-28 01:13:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 02:23:47]  *** The last 200 lines of the pilot log: ***
[2025-07-28 02:23:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-28 02:23:47]  is_altstaged=None
[2025-07-28 02:23:47]  is_tar=False
[2025-07-28 02:23:47]  lfn=log.45743349._056177.job.log.tgz.1
[2025-07-28 02:23:47]  mtime=0
[2025-07-28 02:23:47]  protocol_id=None
[2025-07-28 02:23:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 02:23:47]  replicas=None
[2025-07-28 02:23:47]  scope=mc23_13p6TeV
[2025-07-28 02:23:47]  status=None
[2025-07-28 02:23:47]  status_code=0
[2025-07-28 02:23:47]  storage_token=
[2025-07-28 02:23:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748417361/log.45743349._056177.job.log.tgz.1
[2025-07-28 02:23:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/b8/log.45743349._056177.job.log.tgz.1
[2025-07-28 02:23:47]  workdir=None
[2025-07-28 02:23:47] ]
[2025-07-28 02:23:47] 2025-07-28 06:23:09,985 | INFO     | transferring file log.45743349._056177.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748417361/log.45743349._056177.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 02:23:47] 2025-07-28 06:23:09,985 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748417361/log.45743349._056177.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._056177.job
[2025-07-28 02:23:47] 2025-07-28 06:23:10,006 | INFO     | adding to output.list: log.45743349._056177.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/b8/log.45743349._056177.job.log.tg
[2025-07-28 02:23:47] 2025-07-28 06:23:10,007 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 02:23:47] 2025-07-28 06:23:10,007 | INFO     | summary of transferred files:
[2025-07-28 02:23:47] 2025-07-28 06:23:10,007 | INFO     |  -- lfn=log.45743349._056177.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 02:23:47] 2025-07-28 06:23:10,008 | INFO     | stage-out finished correctly
[2025-07-28 02:23:47] 2025-07-28 06:23:10,086 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 02:23:47] 2025-07-28 06:23:10,154 | INFO     | job 6748417361 has state=finished
[2025-07-28 02:23:47] 2025-07-28 06:23:10,154 | INFO     | preparing for final server update for job 6748417361 in state='finished'
[2025-07-28 02:23:47] 2025-07-28 06:23:10,155 | INFO     | this job has now completed (state=finished)
[2025-07-28 02:23:47] 2025-07-28 06:23:10,155 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 02:23:47] 2025-07-28 06:23:10,155 | INFO     | log transfer has been attempted: DONE
[2025-07-28 02:23:47] 2025-07-28 06:23:10,155 | INFO     | job 6748417361 has finished - writing final server update
[2025-07-28 02:23:47] 2025-07-28 06:23:10,155 | INFO     | total number of processed events: 400 (read)
[2025-07-28 02:23:47] 2025-07-28 06:23:10,157 | INFO     | executing command: lscpu
[2025-07-28 02:23:47] 2025-07-28 06:23:10,211 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 02:23:47] 2025-07-28 06:23:12,871 | WARNING  | process 3333708 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 02:23:47] 2025-07-28 06:23:12,871 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748417361/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:23:47] 2025-07-28 06:23:13,152 | INFO     | number of running child processes to parent process 3333708: 1
[2025-07-28 02:23:47] 2025-07-28 06:23:13,152 | INFO     | maximum number of monitored processes: 6
[2025-07-28 02:23:47] 2025-07-28 06:23:15,230 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 02:23:47] 2025-07-28 06:23:15,239 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2914.623946428572
[2025-07-28 02:23:47] 2025-07-28 06:23:15,248 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748417361/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:23:47] 2025-07-28 06:23:15,248 | INFO     | extracted standard info from prmon json
[2025-07-28 02:23:47] 2025-07-28 06:23:15,249 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 02:23:47] 2025-07-28 06:23:15,249 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 02:23:47] 2025-07-28 06:23:15,249 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 02:23:47] 2025-07-28 06:23:15,249 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 02:23:47] 2025-07-28 06:23:15,251 | INFO     | fitting pss+swap vs Time
[2025-07-28 02:23:47] 2025-07-28 06:23:15,251 | INFO     | sum of square deviations: 70364110.0
[2025-07-28 02:23:47] 2025-07-28 06:23:15,251 | INFO     | sum of deviations: -721876257.0
[2025-07-28 02:23:47] 2025-07-28 06:23:15,251 | INFO     | mean x: 1753681777.0
[2025-07-28 02:23:47] 2025-07-28 06:23:15,251 | INFO     | mean y: 2457983.3278688523
[2025-07-28 02:23:47] 2025-07-28 06:23:15,251 | INFO     | -- intersect: 17993749810.22469
[2025-07-28 02:23:47] 2025-07-28 06:23:15,251 | INFO     | intersect: 17993749810.22469
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | chi2: 0.04377073533775856
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | -- intersect: 17993749810.22469
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | current memory leak: -10.26 B/s (using 61 data points, chi2=0.04)
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | could have reported an average CPU frequency of 2811 MHz (6 samples)
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | ..............................
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | . Timing measurements:
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | . get job = 0 s
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | . initial setup = 2 s
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | . payload setup = 8 s
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | . stage-in = 0 s
[2025-07-28 02:23:47] 2025-07-28 06:23:15,252 | INFO     | . payload execution = 4148 s
[2025-07-28 02:23:47] 2025-07-28 06:23:15,253 | INFO     | . stage-out = 0 s
[2025-07-28 02:23:47] 2025-07-28 06:23:15,253 | INFO     | . log creation = 0 s
[2025-07-28 02:23:47] 2025-07-28 06:23:15,253 | INFO     | ..............................
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | 
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | job summary report
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | --------------------------------------------------
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | PanDA job id: 6748417361
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | task id: 45743349
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | errors: (none)
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | pilot state: finished 
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | transexitcode: 0
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | exeerrorcode: 0
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | exeerrordiag: 
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | exitcode: 0
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | exitmsg: OK
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | cpuconsumptiontime: 44445 s
[2025-07-28 02:23:47] 2025-07-28 06:23:15,353 | INFO     | nevents: 400
[2025-07-28 02:23:47] 2025-07-28 06:23:15,354 | INFO     | neventsw: 0
[2025-07-28 02:23:47] 2025-07-28 06:23:15,354 | INFO     | pid: 3333708
[2025-07-28 02:23:47] 2025-07-28 06:23:15,354 | INFO     | pgrp: 3333708
[2025-07-28 02:23:47] 2025-07-28 06:23:15,354 | INFO     | corecount: 12
[2025-07-28 02:23:47] 2025-07-28 06:23:15,354 | INFO     | event service: False
[2025-07-28 02:23:47] 2025-07-28 06:23:15,354 | INFO     | sizes: {0: 2396646, 1: 2397502, 6: 2397764, 12: 2397792, 4160: 2423631, 4161: 2432813, 4166: 2432951}
[2025-07-28 02:23:47] 2025-07-28 06:23:15,354 | INFO     | --------------------------------------------------
[2025-07-28 02:23:47] 2025-07-28 06:23:15,354 | INFO     | 
[2025-07-28 02:23:47] 2025-07-28 06:23:15,354 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 02:23:47] 2025-07-28 06:23:15,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,374 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 02:23:47] 2025-07-28 06:23:15,375 | INFO     | job 6748417361 has completed (purged errors)
[2025-07-28 02:23:47] 2025-07-28 06:23:15,376 | INFO     | overall cleanup function is called
[2025-07-28 02:23:47] 2025-07-28 06:23:16,383 | INFO     | --- collectZombieJob: --- 10, [3333708]
[2025-07-28 02:23:47] 2025-07-28 06:23:16,383 | INFO     | zombie collector waiting for pid 3333708
[2025-07-28 02:23:47] 2025-07-28 06:23:16,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 02:23:47] 2025-07-28 06:23:16,383 | INFO     | collected zombie processes
[2025-07-28 02:23:47] 2025-07-28 06:23:16,384 | INFO     | will attempt to kill all subprocesses of pid=3333708
[2025-07-28 02:23:47] 2025-07-28 06:23:16,625 | INFO     | process IDs to be killed: [3333708] (in reverse order)
[2025-07-28 02:23:47] 2025-07-28 06:23:16,715 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 02:23:47] 2025-07-28 06:23:16,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 02:23:47] 2025-07-28 06:23:16,725 | INFO     | did not find any defunct processes belonging to 3333708
[2025-07-28 02:23:47] 2025-07-28 06:23:16,735 | INFO     | did not find any defunct processes belonging to 3333708
[2025-07-28 02:23:47] 2025-07-28 06:23:16,736 | INFO     | ready for new job
[2025-07-28 02:23:47] 2025-07-28 06:23:16,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 02:23:47] 2025-07-28 06:23:16,737 | INFO     | ***************************************
[2025-07-28 02:23:47] 2025-07-28 06:23:16,738 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 02:23:47] 2025-07-28 06:23:16,738 | INFO     | ***************************************
[2025-07-28 02:23:47] 2025-07-28 06:23:16,738 | INFO     | 
[2025-07-28 02:23:47] 2025-07-28 06:23:16,753 | INFO     | architecture information:
[2025-07-28 02:23:47] 2025-07-28 06:23:16,753 | INFO     | executing command: cat /etc/os-release
[2025-07-28 02:23:47] 2025-07-28 06:23:16,770 | INFO     | cat /etc/os-release:
[2025-07-28 02:23:47] NAME="CentOS Linux"
[2025-07-28 02:23:47] VERSION="7 (Core)"
[2025-07-28 02:23:47] ID="centos"
[2025-07-28 02:23:47] ID_LIKE="rhel fedora"
[2025-07-28 02:23:47] VERSION_ID="7"
[2025-07-28 02:23:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 02:23:47] ANSI_COLOR="0;31"
[2025-07-28 02:23:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 02:23:47] HOME_URL="https://www.centos.org/"
[2025-07-28 02:23:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 02:23:47] 
[2025-07-28 02:23:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 02:23:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 02:23:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 02:23:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 02:23:47] 
[2025-07-28 02:23:47] 2025-07-28 06:23:16,771 | INFO     | ***************************************
[2025-07-28 02:23:47] 2025-07-28 06:23:17,274 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 02:23:47] 2025-07-28 06:23:17,291 | INFO     | sufficient remaining disk space (76436996096 B)
[2025-07-28 02:23:47] 2025-07-28 06:23:17,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 02:23:47] 2025-07-28 06:23:17,291 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 02:23:47] 2025-07-28 06:23:17,291 | INFO     | update_server=False
[2025-07-28 02:23:47] 2025-07-28 06:23:17,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 02:23:47] 2025-07-28 06:23:17,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:23:47] 2025-07-28 06:23:17,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:23:47] 2025-07-28 06:23:17,292 | INFO     | aborting loop
[2025-07-28 02:23:47] 2025-07-28 06:23:17,402 | INFO     | all job control threads have been joined
[2025-07-28 02:23:47] 2025-07-28 06:23:17,605 | INFO     | all data control threads have been joined
[2025-07-28 02:23:47] 2025-07-28 06:23:18,000 | INFO     | all payload control threads have been joined
[2025-07-28 02:23:47] 2025-07-28 06:23:18,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 02:23:47] 2025-07-28 06:23:18,296 | INFO     | [job] queue monitor thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:18,297 | INFO     | [job] retrieve thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:18,297 | INFO     | [job] job monitor thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:18,408 | INFO     | [job] control thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:18,610 | INFO     | [data] control thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:18,743 | INFO     | [payload] failed_post thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:18,893 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:18,991 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:19,005 | INFO     | [payload] control thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:19,026 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:19,328 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:19,503 | INFO     | [data] copytool_in thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:19,691 | INFO     | [job] validate thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:19,855 | INFO     | [payload] validate_post thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:20,101 | INFO     | [data] copytool_out thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:20,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 02:23:47] 2025-07-28 06:23:24,669 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 02:23:47] 2025-07-28 06:23:25,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140539988645696)>', '<ExcThread(monitor, started 140539475240704)>']
[2025-07-28 02:23:47] 2025-07-28 06:23:30,557 | INFO     | all workflow threads have been joined
[2025-07-28 02:23:47] 2025-07-28 06:23:30,558 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 02:23:47] 2025-07-28 06:23:30,558 | INFO     | traces error code: 0
[2025-07-28 02:23:47] 2025-07-28 06:23:30,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 02:23:47] 2025-07-28 06:23:47,149 | INFO     | PID=3326581 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:23:47] 2025-07-28 06:23:47,149 | INFO     | .. there are 12 such processes running
[2025-07-28 02:23:47] 2025-07-28 06:23:47,150 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 02:23:47] 2025-07-28 06:23:47,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 02:23:47] 2025-07-28 06:23:47,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 02:23:47] 2025-07-28 06:23:47,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 02:23:47] 2025-07-28 06:23:47,150 | INFO     | [monitor] control thread has ended
[2025-07-28 02:23:47] 2025-07-28 06:23:47,305 [wrapper] ==== pilot stdout END ====
[2025-07-28 02:23:47] 2025-07-28 06:23:47,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 02:23:47] 2025-07-28 06:23:47,313 [wrapper] pilotpid: 3326581
[2025-07-28 02:23:47] 2025-07-28 06:23:47,318 [wrapper] Pilot exit status: 0
[2025-07-28 02:23:47] 2025-07-28 06:23:47,332 [wrapper] pandaids: 6748417361
[2025-07-28 02:23:47] 2025-07-28 06:23:47,394 [wrapper] cleanup supervisor_pilot 3495263 3326582
[2025-07-28 02:23:47] 2025-07-28 06:23:47,397 [wrapper] Test setup, not cleaning
[2025-07-28 02:23:47] 2025-07-28 06:23:47,400 [wrapper] apfmon messages muted
[2025-07-28 02:23:47] 2025-07-28 06:23:47,402 [wrapper] ==== wrapper stdout END ====
[2025-07-28 02:23:47] 2025-07-28 06:23:47,406 [wrapper] ==== wrapper stderr END ====
[2025-07-28 02:23:47]  *** Error codes and diagnostics ***
[2025-07-28 02:23:47]     "exeErrorCode": 0,
[2025-07-28 02:23:47]     "exeErrorDiag": "",
[2025-07-28 02:23:47]     "pilotErrorCode": 0,
[2025-07-28 02:23:47]     "pilotErrorDiag": "",
[2025-07-28 02:23:47]  *** Listing of results directory ***
[2025-07-28 02:23:47] total 351436
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 23:07 pilot3.tar.gz
[2025-07-28 02:23:47] -rwx------. 1 boincer umatlas     36292 Jul 27 23:23 runpilot2-wrapper.sh
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 23:23 queuedata.json
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas       100 Jul 28 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 02:23:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 01:13 run_atlas
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas       105 Jul 28 01:13 job.xml
[2025-07-28 02:23:47] -rw-r--r--. 2 boincer umatlas 147640789 Jul 28 01:13 EVNT.45743347._002118.pool.root.1
[2025-07-28 02:23:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 01:13 start_atlas.sh
[2025-07-28 02:23:47] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 01:13 shared
[2025-07-28 02:23:47] -rw-r--r--. 2 boincer umatlas    542894 Jul 28 01:13 input.tar.gz
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas         0 Jul 28 01:13 boinc_lockfile
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas      2562 Jul 28 01:13 pandaJob.out
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas    980125 Jul 28 01:13 agis_schedconf.cvmfs.json
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas   1593052 Jul 28 01:13 agis_ddmendpoints.agis.ALL.json
[2025-07-28 02:23:47] drwx------. 4 boincer umatlas      4096 Jul 28 01:13 pilot3
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas      6842 Jul 28 02:20 init_data.xml
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas 206795994 Jul 28 02:22 HITS.45743349._056177.pool.root.1
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas       529 Jul 28 02:22 boinc_task_state.xml
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas      1036 Jul 28 02:23 memory_monitor_summary.json
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas        95 Jul 28 02:23 pilot_heartbeat.json
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas    359465 Jul 28 02:23 log.45743349._056177.job.log.tgz.1
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas      7826 Jul 28 02:23 heartbeat.json
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 02:23 boinc_mmap_file
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas        27 Jul 28 02:23 wrapper_checkpoint.txt
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas       823 Jul 28 02:23 pilotlog.txt
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas    418091 Jul 28 02:23 log.45743349._056177.job.log.1
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas       357 Jul 28 02:23 output.list
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas       620 Jul 28 02:23 runtime_log
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas    798720 Jul 28 02:23 result.tar.gz
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas      8667 Jul 28 02:23 runtime_log.err
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas       655 Jul 28 02:23 3LBODmWdT07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfaWLDmRwBIFn.diag
[2025-07-28 02:23:47] -rw-r--r--. 1 boincer umatlas     21462 Jul 28 02:23 stderr.txt
[2025-07-28 02:23:47] HITS file was successfully produced:
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas 206795994 Jul 28 02:22 shared/HITS.pool.root.1
[2025-07-28 02:23:47]  *** Contents of shared directory: ***
[2025-07-28 02:23:47] total 347468
[2025-07-28 02:23:47] -rw-r--r--. 2 boincer umatlas 147640789 Jul 28 01:13 ATLAS.root_0
[2025-07-28 02:23:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 01:13 start_atlas.sh
[2025-07-28 02:23:47] -rw-r--r--. 2 boincer umatlas    542894 Jul 28 01:13 input.tar.gz
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas 206795994 Jul 28 02:22 HITS.pool.root.1
[2025-07-28 02:23:47] -rw-------. 1 boincer umatlas    798720 Jul 28 02:23 result.tar.gz
02:23:49 (3322962): run_atlas exited; CPU time 44485.835793
02:23:49 (3322962): called boinc_finish(0)

</stderr_txt>
]]>

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