Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:40:43 (2147223): wrapper (7.7.26015): starting
14:40:43 (2147223): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 14:40:43] Arguments: --nthreads 12
[2025-07-28 14:40:43] Threads: 12
[2025-07-28 14:40:43] Checking for CVMFS
[2025-07-28 14:40:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 14:40:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 14:40:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 14:40:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 14:40:45] 2.13.1.0 4095 5635 126716 148848 3 162 32714139 46080001 38219 130560 0 38935689 99.913 8646086 21729 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-28 14:40:45] CVMFS is ok
[2025-07-28 14:40:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 14:40:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 14:40:45] Further information can be found at the LHC@home message board.
[2025-07-28 14:40:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 14:40:45] Checking for apptainer binary...
[2025-07-28 14:40:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 14:40:45] Running /usr/bin/apptainer --version
[2025-07-28 14:40:45] apptainer version 1.4.1-1.el9
[2025-07-28 14:40:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 14:40:46] mff2104.farm.particle.cz
[2025-07-28 14:40:46] apptainer works
[2025-07-28 14:40:46] Set ATHENA_PROC_NUMBER=12
[2025-07-28 14:40:46] Set ATHENA_CORE_NUMBER=12
[2025-07-28 14:40:46] Starting ATLAS job with PandaID=6748388141
[2025-07-28 14:40:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:09:38]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:09:38] 2025-07-28 14:59:25,051 | INFO     | monitor loop #579: job 0:6748388141 is in state 'finished'
[2025-07-28 17:09:38] 2025-07-28 14:59:25,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:09:38] 2025-07-28 14:59:27,556 | INFO     | monitor loop #580: job 0:6748388141 is in state 'finished'
[2025-07-28 17:09:38] 2025-07-28 14:59:27,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:09:38] 2025-07-28 14:59:29,098 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 17:09:38] 2025-07-28 14:59:29,126 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2711.985552083333
[2025-07-28 17:09:38] 2025-07-28 14:59:29,159 | INFO     | using path: /scratch/.boinc/slots/8/PanDA_Pilot-6748388141/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:09:38] 2025-07-28 14:59:29,160 | INFO     | extracted standard info from prmon json
[2025-07-28 17:09:38] 2025-07-28 14:59:29,160 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 17:09:38] 2025-07-28 14:59:29,160 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:09:38] 2025-07-28 14:59:29,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:09:38] 2025-07-28 14:59:29,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:09:38] 2025-07-28 14:59:29,163 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:09:38] 2025-07-28 14:59:29,168 | INFO     | sum of square deviations: 697020536.0763377
[2025-07-28 17:09:38] 2025-07-28 14:59:29,168 | INFO     | sum of deviations: 49070835610.92366
[2025-07-28 17:09:38] 2025-07-28 14:59:29,169 | INFO     | mean x: 1753710725.0839694
[2025-07-28 17:09:38] 2025-07-28 14:59:29,169 | INFO     | mean y: 2551519.9160305345
[2025-07-28 17:09:38] 2025-07-28 14:59:29,169 | INFO     | -- intersect: -123460167647.77911
[2025-07-28 17:09:38] 2025-07-28 14:59:29,169 | INFO     | intersect: -123460167647.77911
[2025-07-28 17:09:38] 2025-07-28 14:59:29,169 | INFO     | chi2: 4.4205504703857965
[2025-07-28 17:09:38] 2025-07-28 14:59:29,169 | INFO     | sum of square deviations: 620213148.5396805
[2025-07-28 17:09:38] 2025-07-28 14:59:29,170 | INFO     | sum of deviations: 55549690266.33334
[2025-07-28 17:09:38] 2025-07-28 14:59:29,170 | INFO     | mean x: 1753710572.5873015
[2025-07-28 17:09:38] 2025-07-28 14:59:29,170 | INFO     | mean y: 2563838.8333333335
[2025-07-28 17:09:38] 2025-07-28 14:59:29,170 | INFO     | -- intersect: -157069370791.0498
[2025-07-28 17:09:38] 2025-07-28 14:59:29,170 | INFO     | intersect: -157069370791.0498
[2025-07-28 17:09:38] 2025-07-28 14:59:29,170 | INFO     | chi2: 3.7384672014701215
[2025-07-28 17:09:38] 2025-07-28 14:59:29,171 | INFO     | current chi2=3.7384672014701215 (change=15.429826522400214 %)
[2025-07-28 17:09:38] 2025-07-28 14:59:29,171 | INFO     | right removable region: 125
[2025-07-28 17:09:38] 2025-07-28 14:59:29,171 | INFO     | sum of square deviations: 620206438.5396805
[2025-07-28 17:09:38] 2025-07-28 14:59:29,171 | INFO     | sum of deviations: 9010056813.746037
[2025-07-28 17:09:38] 2025-07-28 14:59:29,172 | INFO     | mean x: 1753710877.5873015
[2025-07-28 17:09:38] 2025-07-28 14:59:29,172 | INFO     | mean y: 2630715.3412698414
[2025-07-28 17:09:38] 2025-07-28 14:59:29,172 | INFO     | -- intersect: -25474426051.677547
[2025-07-28 17:09:38] 2025-07-28 14:59:29,172 | INFO     | intersect: -25474426051.677547
[2025-07-28 17:09:38] 2025-07-28 14:59:29,172 | INFO     | chi2: 0.9975579155261277
[2025-07-28 17:09:38] 2025-07-28 14:59:29,172 | INFO     | current chi2=0.9975579155261277 (change=77.4336268252341 %)
[2025-07-28 17:09:38] 2025-07-28 14:59:29,172 | INFO     | sum of square deviations: 549252915.9999983
[2025-07-28 17:09:38] 2025-07-28 14:59:29,173 | INFO     | sum of deviations: -885387548.909091
[2025-07-28 17:09:38] 2025-07-28 14:59:29,173 | INFO     | mean x: 1753711030.090909
[2025-07-28 17:09:38] 2025-07-28 14:59:29,173 | INFO     | mean y: 2651909.4462809917
[2025-07-28 17:09:38] 2025-07-28 14:59:29,173 | INFO     | -- intersect: 2829608062.423777
[2025-07-28 17:09:38] 2025-07-28 14:59:29,173 | INFO     | intersect: 2829608062.423777
[2025-07-28 17:09:38] 2025-07-28 14:59:29,173 | INFO     | chi2: 0.8185986005920552
[2025-07-28 17:09:38] 2025-07-28 14:59:29,173 | INFO     | current chi2=0.8185986005920552 (change=17.93974185846508 %)
[2025-07-28 17:09:38] 2025-07-28 14:59:29,173 | INFO     | left removable region: 20
[2025-07-28 17:09:38] 2025-07-28 14:59:29,174 | INFO     | sum of square deviations: 358903755.3904763
[2025-07-28 17:09:38] 2025-07-28 14:59:29,174 | INFO     | sum of deviations: 1136056657.7809522
[2025-07-28 17:09:38] 2025-07-28 14:59:29,174 | INFO     | mean x: 1753711152.0761905
[2025-07-28 17:09:38] 2025-07-28 14:59:29,174 | INFO     | mean y: 2684129.1523809526
[2025-07-28 17:09:38] 2025-07-28 14:59:29,174 | INFO     | -- intersect: -5548428669.801986
[2025-07-28 17:09:38] 2025-07-28 14:59:29,174 | INFO     | intersect: -5548428669.801986
[2025-07-28 17:09:38] 2025-07-28 14:59:29,175 | INFO     | chi2: 0.0020468251150793154
[2025-07-28 17:09:38] 2025-07-28 14:59:29,175 | INFO     | -- intersect: -5548428669.801986
[2025-07-28 17:09:38] 2025-07-28 14:59:29,175 | INFO     | current memory leak: 3.17 B/s (using 105 data points, chi2=0.00)
[2025-07-28 17:09:38] 2025-07-28 14:59:29,175 | INFO     | could have reported an average CPU frequency of 2737 MHz (8 samples)
[2025-07-28 17:09:38] 2025-07-28 14:59:29,175 | INFO     | ..............................
[2025-07-28 17:09:38] 2025-07-28 14:59:29,176 | INFO     | . Timing measurements:
[2025-07-28 17:09:38] 2025-07-28 14:59:29,176 | INFO     | . get job = 0 s
[2025-07-28 17:09:38] 2025-07-28 14:59:29,176 | INFO     | . initial setup = 4 s
[2025-07-28 17:09:38] 2025-07-28 14:59:29,176 | INFO     | . payload setup = 78 s
[2025-07-28 17:09:38] 2025-07-28 14:59:29,176 | INFO     | . stage-in = 0 s
[2025-07-28 17:09:38] 2025-07-28 14:59:29,176 | INFO     | . payload execution = 8010 s
[2025-07-28 17:09:38] 2025-07-28 14:59:29,176 | INFO     | . stage-out = 2 s
[2025-07-28 17:09:38] 2025-07-28 14:59:29,176 | INFO     | . log creation = 0 s
[2025-07-28 17:09:38] 2025-07-28 14:59:29,176 | INFO     | ..............................
[2025-07-28 17:09:38] 2025-07-28 14:59:29,772 | INFO     | 
[2025-07-28 17:09:38] 2025-07-28 14:59:29,772 | INFO     | job summary report
[2025-07-28 17:09:38] 2025-07-28 14:59:29,772 | INFO     | --------------------------------------------------
[2025-07-28 17:09:38] 2025-07-28 14:59:29,772 | INFO     | PanDA job id: 6748388141
[2025-07-28 17:09:38] 2025-07-28 14:59:29,772 | INFO     | task id: 45743349
[2025-07-28 17:09:38] 2025-07-28 14:59:29,772 | INFO     | errors: (none)
[2025-07-28 17:09:38] 2025-07-28 14:59:29,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:09:38] 2025-07-28 14:59:29,772 | INFO     | pilot state: finished 
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | transexitcode: 0
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | exeerrorcode: 0
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | exeerrordiag: 
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | exitcode: 0
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | exitmsg: OK
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | cpuconsumptiontime: 45832 s
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | nevents: 400
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | neventsw: 0
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | pid: 2239371
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | pgrp: 2239371
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | corecount: 12
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | event service: False
[2025-07-28 17:09:38] 2025-07-28 14:59:29,773 | INFO     | sizes: {0: 2397314, 1: 2397513, 12: 2397513, 23: 2397541, 33: 2397569, 44: 2397625, 45: 2398043, 55: 2398071, 8093: 2425932, 8096: 2434988, 8135: 2435126}
[2025-07-28 17:09:38] 2025-07-28 14:59:29,774 | INFO     | --------------------------------------------------
[2025-07-28 17:09:38] 2025-07-28 14:59:29,774 | INFO     | 
[2025-07-28 17:09:38] 2025-07-28 14:59:29,774 | INFO     | executing command: ls -lF /scratch/.boinc/slots/8
[2025-07-28 17:09:38] 2025-07-28 14:59:29,900 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,902 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:09:38] 2025-07-28 14:59:29,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,902 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:09:38] 2025-07-28 14:59:29,902 | INFO     | job 6748388141 has completed (purged errors)
[2025-07-28 17:09:38] 2025-07-28 14:59:29,902 | INFO     | overall cleanup function is called
[2025-07-28 17:09:38] 2025-07-28 14:59:30,917 | INFO     | --- collectZombieJob: --- 10, [2239371]
[2025-07-28 17:09:38] 2025-07-28 14:59:30,917 | INFO     | zombie collector waiting for pid 2239371
[2025-07-28 17:09:38] 2025-07-28 14:59:30,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:09:38] 2025-07-28 14:59:30,917 | INFO     | collected zombie processes
[2025-07-28 17:09:38] 2025-07-28 14:59:30,917 | INFO     | will attempt to kill all subprocesses of pid=2239371
[2025-07-28 17:09:38] 2025-07-28 14:59:31,629 | INFO     | process IDs to be killed: [2239371] (in reverse order)
[2025-07-28 17:09:38] 2025-07-28 14:59:32,053 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:09:38] 2025-07-28 14:59:32,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:09:38] 2025-07-28 14:59:32,089 | INFO     | did not find any defunct processes belonging to 2239371
[2025-07-28 17:09:38] 2025-07-28 14:59:32,118 | INFO     | did not find any defunct processes belonging to 2239371
[2025-07-28 17:09:38] 2025-07-28 14:59:32,119 | INFO     | ready for new job
[2025-07-28 17:09:38] 2025-07-28 14:59:32,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:09:38] 2025-07-28 14:59:32,121 | INFO     | ***************************************
[2025-07-28 17:09:38] 2025-07-28 14:59:32,121 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:09:38] 2025-07-28 14:59:32,121 | INFO     | ***************************************
[2025-07-28 17:09:38] 2025-07-28 14:59:32,121 | INFO     | 
[2025-07-28 17:09:38] 2025-07-28 14:59:32,128 | INFO     | architecture information:
[2025-07-28 17:09:38] 2025-07-28 14:59:32,132 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:09:38] 2025-07-28 14:59:32,243 | INFO     | cat /etc/os-release:
[2025-07-28 17:09:38] NAME="CentOS Linux"
[2025-07-28 17:09:38] VERSION="7 (Core)"
[2025-07-28 17:09:38] ID="centos"
[2025-07-28 17:09:38] ID_LIKE="rhel fedora"
[2025-07-28 17:09:38] VERSION_ID="7"
[2025-07-28 17:09:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:09:38] ANSI_COLOR="0;31"
[2025-07-28 17:09:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:09:38] HOME_URL="https://www.centos.org/"
[2025-07-28 17:09:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:09:38] 
[2025-07-28 17:09:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:09:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:09:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:09:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:09:38] 
[2025-07-28 17:09:38] 2025-07-28 14:59:32,243 | INFO     | ***************************************
[2025-07-28 17:09:38] 2025-07-28 14:59:32,747 | INFO     | executing command: df -mP /scratch/.boinc/slots/8
[2025-07-28 17:09:38] 2025-07-28 14:59:32,895 | INFO     | sufficient remaining disk space (1535274647552 B)
[2025-07-28 17:09:38] 2025-07-28 14:59:32,896 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:09:38] 2025-07-28 14:59:32,896 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:09:38] 2025-07-28 14:59:32,896 | INFO     | update_server=False
[2025-07-28 17:09:38] 2025-07-28 14:59:32,896 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:09:38] 2025-07-28 14:59:32,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:09:38] 2025-07-28 14:59:32,923 | INFO     | all data control threads have been joined
[2025-07-28 17:09:38] 2025-07-28 14:59:33,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:09:38] 2025-07-28 14:59:33,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:09:38] 2025-07-28 14:59:33,581 | INFO     | aborting loop
[2025-07-28 17:09:38] 2025-07-28 14:59:33,846 | INFO     | all payload control threads have been joined
[2025-07-28 17:09:38] 2025-07-28 14:59:33,902 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:33,929 | INFO     | [data] control thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:33,995 | INFO     | all job control threads have been joined
[2025-07-28 17:09:38] 2025-07-28 14:59:34,017 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:34,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:09:38] 2025-07-28 14:59:34,526 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:34,539 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:34,587 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:34,604 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:34,661 | INFO     | [job] validate thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:34,795 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:34,852 | INFO     | [payload] control thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:35,002 | INFO     | [job] control thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:35,158 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:35,314 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:35,318 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:35,320 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:36,910 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:09:38] 2025-07-28 14:59:37,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669175977792)>', '<ExcThread(monitor, started 140668676589312)>']
[2025-07-28 17:09:38] 2025-07-28 14:59:42,609 | INFO     | all workflow threads have been joined
[2025-07-28 17:09:38] 2025-07-28 14:59:42,609 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:09:38] 2025-07-28 14:59:42,609 | INFO     | traces error code: 0
[2025-07-28 17:09:38] 2025-07-28 14:59:42,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:09:38] 2025-07-28 15:00:02,585 | INFO     | PID=2174048 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 17:09:38] 2025-07-28 15:00:02,585 | INFO     | .. there are 59 such processes running
[2025-07-28 17:09:38] 2025-07-28 15:00:02,586 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:09:38] 2025-07-28 15:00:02,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:09:38] 2025-07-28 15:00:02,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:09:38] 2025-07-28 15:00:02,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:09:38] 2025-07-28 15:00:02,586 | INFO     | [monitor] control thread has ended
[2025-07-28 17:09:38] 2025-07-28 15:00:03,205 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:09:38] 2025-07-28 15:00:03,255 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:09:38] 2025-07-28 15:00:03,298 [wrapper] pilotpid: 2174048
[2025-07-28 17:09:38] 2025-07-28 15:00:03,317 [wrapper] Pilot exit status: 0
[2025-07-28 17:09:38] 2025-07-28 15:00:03,495 [wrapper] pandaids: 6748388141
[2025-07-28 17:09:38] 2025-07-28 15:00:03,865 [wrapper] cleanup supervisor_pilot 2654101 2174049
[2025-07-28 17:09:38] 2025-07-28 15:00:03,902 [wrapper] Test setup, not cleaning
[2025-07-28 17:09:38] 2025-07-28 15:00:03,947 [wrapper] apfmon messages muted
[2025-07-28 17:09:38] 2025-07-28 15:00:03,991 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:09:38] 2025-07-28 15:00:04,035 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:09:38]  *** Error codes and diagnostics ***
[2025-07-28 17:09:38]     "exeErrorCode": 0,
[2025-07-28 17:09:38]     "exeErrorDiag": "",
[2025-07-28 17:09:38]     "pilotErrorCode": 0,
[2025-07-28 17:09:38]     "pilotErrorDiag": "",
[2025-07-28 17:09:38]  *** Listing of results directory ***
[2025-07-28 17:09:38] total 353712
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc    530466 Jul 28 03:42 pilot3.tar.gz
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc      5112 Jul 28 03:47 queuedata.json
[2025-07-28 17:09:38] -rwx------ 1 boinc boinc     36292 Jul 28 03:47 runpilot2-wrapper.sh
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc       100 Jul 28 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:09:38] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 14:40 run_atlas
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc       105 Jul 28 14:40 job.xml
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc      6664 Jul 28 14:40 init_data.xml
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc 149050917 Jul 28 14:40 EVNT.45743347._003001.pool.root.1
[2025-07-28 17:09:38] drwxrwx--x 2 boinc boinc      4096 Jul 28 14:40 shared
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc    542898 Jul 28 14:40 input.tar.gz
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc     15095 Jul 28 14:40 start_atlas.sh
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc         0 Jul 28 14:40 boinc_lockfile
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc      2572 Jul 28 14:40 pandaJob.out
[2025-07-28 17:09:38] -rw------- 1 boinc boinc    977006 Jul 28 14:42 agis_schedconf.cvmfs.json
[2025-07-28 17:09:38] -rw------- 1 boinc boinc   1593052 Jul 28 14:42 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:09:38] drwx------ 4 boinc boinc      4096 Jul 28 14:42 pilot3
[2025-07-28 17:09:38] -rw------- 1 boinc boinc 207026675 Jul 28 16:57 HITS.45743349._056091.pool.root.1
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc       529 Jul 28 16:57 boinc_task_state.xml
[2025-07-28 17:09:38] -rw------- 1 boinc boinc      1027 Jul 28 16:58 memory_monitor_summary.json
[2025-07-28 17:09:38] -rw------- 1 boinc boinc    396338 Jul 28 16:58 log.45743349._056091.job.log.tgz.1
[2025-07-28 17:09:38] -rw------- 1 boinc boinc      7780 Jul 28 16:59 heartbeat.json
[2025-07-28 17:09:38] -rw------- 1 boinc boinc       823 Jul 28 17:00 pilotlog.txt
[2025-07-28 17:09:38] -rw------- 1 boinc boinc        95 Jul 28 17:00 pilot_heartbeat.json
[2025-07-28 17:09:38] -rw------- 1 boinc boinc    731514 Jul 28 17:00 log.45743349._056091.job.log.1
[2025-07-28 17:09:38] -rw------- 1 boinc boinc       357 Jul 28 17:00 output.list
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc       620 Jul 28 17:00 runtime_log
[2025-07-28 17:09:38] -rw------- 1 boinc boinc   1146880 Jul 28 17:00 result.tar.gz
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc      8721 Jul 28 17:00 runtime_log.err
[2025-07-28 17:09:38] -rw------- 1 boinc boinc       664 Jul 28 17:00 jt5KDm28R07n9Rq4apOajLDm4fhM0noT9bVof3QYDmvB3KDmrzzLpm.diag
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc        26 Jul 28 17:09 wrapper_checkpoint.txt
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc      8192 Jul 28 17:09 boinc_mmap_file
[2025-07-28 17:09:38] -rw-r--r-- 1 boinc boinc     21303 Jul 28 17:09 stderr.txt
[2025-07-28 17:09:38] HITS file was successfully produced:
[2025-07-28 17:09:38] -rw------- 1 boinc boinc 207026675 Jul 28 16:57 shared/HITS.pool.root.1
[2025-07-28 17:09:38]  *** Contents of shared directory: ***
[2025-07-28 17:09:38] total 349408
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc 149050917 Jul 28 14:40 ATLAS.root_0
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc    542898 Jul 28 14:40 input.tar.gz
[2025-07-28 17:09:38] -rw-r--r-- 2 boinc boinc     15095 Jul 28 14:40 start_atlas.sh
[2025-07-28 17:09:38] -rw------- 1 boinc boinc 207026675 Jul 28 16:57 HITS.pool.root.1
[2025-07-28 17:09:38] -rw------- 1 boinc boinc   1146880 Jul 28 17:00 result.tar.gz
17:09:40 (2147223): run_atlas exited; CPU time 46179.829532
17:09:40 (2147223): called boinc_finish(0)

</stderr_txt>
]]>

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