Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:09:39 (3871569): wrapper (7.7.26015): starting
18:09:39 (3871569): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 18:09:39] Arguments: --nthreads 4
[2025-07-28 18:09:39] Threads: 4
[2025-07-28 18:09:39] Checking for CVMFS
[2025-07-28 18:09:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 18:09:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 18:09:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 18:09:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 18:09:40] 2.9.2.0 1735005 6257 96972 148855 3 56 34407480 36864000 0 130560 0 5619117 99.992 234994 1959 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 18:09:40] CVMFS is ok
[2025-07-28 18:09:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 18:09:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 18:09:40] Further information can be found at the LHC@home message board.
[2025-07-28 18:09:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 18:09:40] Checking for apptainer binary...
[2025-07-28 18:09:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 18:09:40] Running /usr/bin/apptainer --version
[2025-07-28 18:09:40] apptainer version 1.4.1-1.1
[2025-07-28 18:09:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 18:09:40] belleA265
[2025-07-28 18:09:40] apptainer works
[2025-07-28 18:09:40] Set ATHENA_PROC_NUMBER=4
[2025-07-28 18:09:40] Set ATHENA_CORE_NUMBER=4
[2025-07-28 18:09:40] Starting ATLAS job with PandaID=6748409476
[2025-07-28 18:09:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 19:42:01]  *** The last 200 lines of the pilot log: ***
[2025-07-28 19:42:01]  is_tar=False
[2025-07-28 19:42:01]  lfn=log.45759947._000131.job.log.tgz.1
[2025-07-28 19:42:01]  mtime=0
[2025-07-28 19:42:01]  protocol_id=None
[2025-07-28 19:42:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 19:42:01]  replicas=None
[2025-07-28 19:42:01]  scope=mc23_13p6TeV
[2025-07-28 19:42:01]  status=None
[2025-07-28 19:42:01]  status_code=0
[2025-07-28 19:42:01]  storage_token=
[2025-07-28 19:42:01]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6748409476/log.45759947._000131.job.log.tgz.1
[2025-07-28 19:42:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/ee/log.45759947._000131.job.log.tgz.1
[2025-07-28 19:42:01]  workdir=None
[2025-07-28 19:42:01] ]
[2025-07-28 19:42:01] 2025-07-28 17:41:22,533 | INFO     | transferring file log.45759947._000131.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6748409476/log.45759947._000131.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 19:42:01] 2025-07-28 17:41:22,533 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6748409476/log.45759947._000131.job.log.tgz.1 /local/data/boinc/slots/0/log.45759947._0001
[2025-07-28 19:42:01] 2025-07-28 17:41:22,546 | INFO     | adding to output.list: log.45759947._000131.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/ee/log.45759947._000131.job.log.tg
[2025-07-28 19:42:01] 2025-07-28 17:41:22,547 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 19:42:01] 2025-07-28 17:41:22,547 | INFO     | summary of transferred files:
[2025-07-28 19:42:01] 2025-07-28 17:41:22,547 | INFO     |  -- lfn=log.45759947._000131.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 19:42:01] 2025-07-28 17:41:22,547 | INFO     | stage-out finished correctly
[2025-07-28 19:42:01] 2025-07-28 17:41:25,375 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 19:42:01] 2025-07-28 17:41:26,188 | WARNING  | process 3881861 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 19:42:01] 2025-07-28 17:41:26,189 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6748409476/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 19:42:01] 2025-07-28 17:41:26,225 | INFO     | number of running child processes to parent process 3881861: 1
[2025-07-28 19:42:01] 2025-07-28 17:41:26,225 | INFO     | maximum number of monitored processes: 6
[2025-07-28 19:42:01] 2025-07-28 17:41:26,581 | INFO     | job 6748409476 has state=finished
[2025-07-28 19:42:01] 2025-07-28 17:41:26,581 | INFO     | preparing for final server update for job 6748409476 in state='finished'
[2025-07-28 19:42:01] 2025-07-28 17:41:26,581 | INFO     | this job has now completed (state=finished)
[2025-07-28 19:42:01] 2025-07-28 17:41:26,581 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 19:42:01] 2025-07-28 17:41:26,582 | INFO     | log transfer has been attempted: DONE
[2025-07-28 19:42:01] 2025-07-28 17:41:26,582 | INFO     | job 6748409476 has finished - writing final server update
[2025-07-28 19:42:01] 2025-07-28 17:41:26,582 | INFO     | total number of processed events: 400 (read)
[2025-07-28 19:42:01] 2025-07-28 17:41:26,582 | INFO     | executing command: lscpu
[2025-07-28 19:42:01] 2025-07-28 17:41:26,599 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 19:42:01] 2025-07-28 17:41:28,728 | INFO     | monitor loop #423: job 0:6748409476 is in state 'finished'
[2025-07-28 19:42:01] 2025-07-28 17:41:28,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 19:42:01] 2025-07-28 17:41:28,803 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 19:42:01] 2025-07-28 17:41:28,804 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3701.8232500000004
[2025-07-28 19:42:01] 2025-07-28 17:41:28,805 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6748409476/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 19:42:01] 2025-07-28 17:41:28,806 | INFO     | extracted standard info from prmon json
[2025-07-28 19:42:01] 2025-07-28 17:41:28,806 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 19:42:01] 2025-07-28 17:41:28,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 19:42:01] 2025-07-28 17:41:28,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 19:42:01] 2025-07-28 17:41:28,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | fitting pss+swap vs Time
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | sum of square deviations: 177275882.0
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | sum of deviations: -404653870.0000002
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | mean x: 1753721811.0
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | mean y: 2403485.253012048
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | -- intersect: 4005487885.2198324
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | intersect: 4005487885.2198324
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | chi2: 0.025625490309388342
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | -- intersect: 4005487885.2198324
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | current memory leak: -2.28 B/s (using 83 data points, chi2=0.03)
[2025-07-28 19:42:01] 2025-07-28 17:41:28,807 | INFO     | could have reported an average CPU frequency of 3860 MHz (7 samples)
[2025-07-28 19:42:01] 2025-07-28 17:41:28,808 | INFO     | ..............................
[2025-07-28 19:42:01] 2025-07-28 17:41:28,808 | INFO     | . Timing measurements:
[2025-07-28 19:42:01] 2025-07-28 17:41:28,808 | INFO     | . get job = 0 s
[2025-07-28 19:42:01] 2025-07-28 17:41:28,808 | INFO     | . initial setup = 1 s
[2025-07-28 19:42:01] 2025-07-28 17:41:28,808 | INFO     | . payload setup = 3 s
[2025-07-28 19:42:01] 2025-07-28 17:41:28,808 | INFO     | . stage-in = 0 s
[2025-07-28 19:42:01] 2025-07-28 17:41:28,808 | INFO     | . payload execution = 5475 s
[2025-07-28 19:42:01] 2025-07-28 17:41:28,808 | INFO     | . stage-out = 0 s
[2025-07-28 19:42:01] 2025-07-28 17:41:28,808 | INFO     | . log creation = 0 s
[2025-07-28 19:42:01] 2025-07-28 17:41:28,808 | INFO     | ..............................
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | 
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | job summary report
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | --------------------------------------------------
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | PanDA job id: 6748409476
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | task id: 45759947
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | errors: (none)
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | pilot state: finished 
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | transexitcode: 0
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | exeerrorcode: 0
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | exeerrordiag: 
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | exitcode: 0
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | exitmsg: OK
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | cpuconsumptiontime: 20971 s
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | nevents: 400
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | neventsw: 0
[2025-07-28 19:42:01] 2025-07-28 17:41:28,838 | INFO     | pid: 3881861
[2025-07-28 19:42:01] 2025-07-28 17:41:28,839 | INFO     | pgrp: 3881861
[2025-07-28 19:42:01] 2025-07-28 17:41:28,839 | INFO     | corecount: 4
[2025-07-28 19:42:01] 2025-07-28 17:41:28,839 | INFO     | event service: False
[2025-07-28 19:42:01] 2025-07-28 17:41:28,839 | INFO     | sizes: {0: 2391803, 3: 2392065, 11: 2392093, 5482: 2418812, 5483: 2418811, 5484: 2427871, 5487: 2428055, 5491: 2428249}
[2025-07-28 19:42:01] 2025-07-28 17:41:28,839 | INFO     | --------------------------------------------------
[2025-07-28 19:42:01] 2025-07-28 17:41:28,839 | INFO     | 
[2025-07-28 19:42:01] 2025-07-28 17:41:28,839 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,852 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 19:42:01] 2025-07-28 17:41:28,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,852 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 19:42:01] 2025-07-28 17:41:28,852 | INFO     | job 6748409476 has completed (purged errors)
[2025-07-28 19:42:01] 2025-07-28 17:41:28,852 | INFO     | overall cleanup function is called
[2025-07-28 19:42:01] 2025-07-28 17:41:29,858 | INFO     | --- collectZombieJob: --- 10, [3881861]
[2025-07-28 19:42:01] 2025-07-28 17:41:29,859 | INFO     | zombie collector waiting for pid 3881861
[2025-07-28 19:42:01] 2025-07-28 17:41:29,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 19:42:01] 2025-07-28 17:41:29,859 | INFO     | collected zombie processes
[2025-07-28 19:42:01] 2025-07-28 17:41:29,859 | INFO     | will attempt to kill all subprocesses of pid=3881861
[2025-07-28 19:42:01] 2025-07-28 17:41:29,903 | INFO     | process IDs to be killed: [3881861] (in reverse order)
[2025-07-28 19:42:01] 2025-07-28 17:41:29,927 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 19:42:01] 2025-07-28 17:41:29,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 19:42:01] 2025-07-28 17:41:29,928 | INFO     | did not find any defunct processes belonging to 3881861
[2025-07-28 19:42:01] 2025-07-28 17:41:29,929 | INFO     | did not find any defunct processes belonging to 3881861
[2025-07-28 19:42:01] 2025-07-28 17:41:29,929 | INFO     | ready for new job
[2025-07-28 19:42:01] 2025-07-28 17:41:29,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 19:42:01] 2025-07-28 17:41:29,930 | INFO     | ***************************************
[2025-07-28 19:42:01] 2025-07-28 17:41:29,930 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 19:42:01] 2025-07-28 17:41:29,930 | INFO     | ***************************************
[2025-07-28 19:42:01] 2025-07-28 17:41:29,930 | INFO     | 
[2025-07-28 19:42:01] 2025-07-28 17:41:29,930 | INFO     | architecture information:
[2025-07-28 19:42:01] 2025-07-28 17:41:29,930 | INFO     | executing command: cat /etc/os-release
[2025-07-28 19:42:01] 2025-07-28 17:41:29,939 | INFO     | cat /etc/os-release:
[2025-07-28 19:42:01] NAME="CentOS Linux"
[2025-07-28 19:42:01] VERSION="7 (Core)"
[2025-07-28 19:42:01] ID="centos"
[2025-07-28 19:42:01] ID_LIKE="rhel fedora"
[2025-07-28 19:42:01] VERSION_ID="7"
[2025-07-28 19:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 19:42:01] ANSI_COLOR="0;31"
[2025-07-28 19:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 19:42:01] HOME_URL="https://www.centos.org/"
[2025-07-28 19:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 19:42:01] 
[2025-07-28 19:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 19:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 19:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 19:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 19:42:01] 
[2025-07-28 19:42:01] 2025-07-28 17:41:29,939 | INFO     | ***************************************
[2025-07-28 19:42:01] 2025-07-28 17:41:30,442 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 19:42:01] 2025-07-28 17:41:30,455 | INFO     | sufficient remaining disk space (222196400128 B)
[2025-07-28 19:42:01] 2025-07-28 17:41:30,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 19:42:01] 2025-07-28 17:41:30,455 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 19:42:01] 2025-07-28 17:41:30,455 | INFO     | update_server=False
[2025-07-28 19:42:01] 2025-07-28 17:41:30,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 19:42:01] 2025-07-28 17:41:30,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:42:01] 2025-07-28 17:41:30,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:42:01] 2025-07-28 17:41:30,455 | INFO     | aborting loop
[2025-07-28 19:42:01] 2025-07-28 17:41:30,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 19:42:01] 2025-07-28 17:41:31,070 | INFO     | all job control threads have been joined
[2025-07-28 19:42:01] 2025-07-28 17:41:31,282 | INFO     | all payload control threads have been joined
[2025-07-28 19:42:01] 2025-07-28 17:41:31,371 | INFO     | all data control threads have been joined
[2025-07-28 19:42:01] 2025-07-28 17:41:31,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 19:42:01] 2025-07-28 17:41:31,461 | INFO     | [job] retrieve thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:31,461 | INFO     | [job] queue monitor thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:31,461 | INFO     | [job] job monitor thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:31,938 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:31,969 | INFO     | [job] validate thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:32,034 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:32,046 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:32,076 | INFO     | [job] control thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:32,288 | INFO     | [payload] control thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:32,377 | INFO     | [data] control thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:32,537 | INFO     | [payload] failed_post thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:32,598 | INFO     | [data] copytool_out thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:32,874 | INFO     | [data] copytool_in thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:33,040 | INFO     | [payload] validate_post thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:35,420 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:40,590 | INFO     | job.realtimelogging is not enabled
[2025-07-28 19:42:01] 2025-07-28 17:41:41,596 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 19:42:01] 2025-07-28 17:41:41,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140384846747456)>', '<ExcThread(monitor, started 140384227292928)>']
[2025-07-28 19:42:01] 2025-07-28 17:41:46,975 | INFO     | all workflow threads have been joined
[2025-07-28 19:42:01] 2025-07-28 17:41:46,975 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 19:42:01] 2025-07-28 17:41:46,975 | INFO     | traces error code: 0
[2025-07-28 19:42:01] 2025-07-28 17:41:46,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 19:42:01] 2025-07-28 17:42:01,040 | INFO     | PID=3875267 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 19:42:01] 2025-07-28 17:42:01,040 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 19:42:01] 2025-07-28 17:42:01,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 19:42:01] 2025-07-28 17:42:01,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 19:42:01] 2025-07-28 17:42:01,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 19:42:01] 2025-07-28 17:42:01,040 | INFO     | [monitor] control thread has ended
[2025-07-28 19:42:01] 2025-07-28 17:42:01,089 [wrapper] ==== pilot stdout END ====
[2025-07-28 19:42:01] 2025-07-28 17:42:01,091 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 19:42:01] 2025-07-28 17:42:01,093 [wrapper] pilotpid: 3875267
[2025-07-28 19:42:01] 2025-07-28 17:42:01,096 [wrapper] Pilot exit status: 0
[2025-07-28 19:42:01] 2025-07-28 17:42:01,103 [wrapper] pandaids: 6748409476
[2025-07-28 19:42:01] 2025-07-28 17:42:01,119 [wrapper] cleanup supervisor_pilot 3894813 3875268
[2025-07-28 19:42:01] 2025-07-28 17:42:01,121 [wrapper] Test setup, not cleaning
[2025-07-28 19:42:01] 2025-07-28 17:42:01,123 [wrapper] apfmon messages muted
[2025-07-28 19:42:01] 2025-07-28 17:42:01,126 [wrapper] ==== wrapper stdout END ====
[2025-07-28 19:42:01] 2025-07-28 17:42:01,128 [wrapper] ==== wrapper stderr END ====
[2025-07-28 19:42:01]  *** Error codes and diagnostics ***
[2025-07-28 19:42:01]     "exeErrorCode": 0,
[2025-07-28 19:42:01]     "exeErrorDiag": "",
[2025-07-28 19:42:01]     "pilotErrorCode": 0,
[2025-07-28 19:42:01]     "pilotErrorDiag": "",
[2025-07-28 19:42:01]  *** Listing of results directory ***
[2025-07-28 19:42:01] total 387364
[2025-07-28 19:42:01] -rwx------ 1 boinc boinc     36292 Jul 28 04:51 runpilot2-wrapper.sh
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc      5112 Jul 28 04:51 queuedata.json
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc    530466 Jul 28 04:51 pilot3.tar.gz
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc       100 Jul 28 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 19:42:01] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 18:09 run_atlas
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc       105 Jul 28 18:09 job.xml
[2025-07-28 19:42:01] -rw-r--r-- 2 boinc boinc 224426804 Jul 28 18:09 EVNT.45759945._000002.pool.root.1
[2025-07-28 19:42:01] drwxrwx--x 2 boinc boinc      4096 Jul 28 18:09 shared
[2025-07-28 19:42:01] -rw-r--r-- 2 boinc boinc    542874 Jul 28 18:09 input.tar.gz
[2025-07-28 19:42:01] -rw-r--r-- 2 boinc boinc     15095 Jul 28 18:09 start_atlas.sh
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc         0 Jul 28 18:09 boinc_setup_complete
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc      6450 Jul 28 18:09 init_data.xml
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc         0 Jul 28 18:09 boinc_lockfile
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc      2557 Jul 28 18:09 pandaJob.out
[2025-07-28 19:42:01] -rw------- 1 boinc boinc    977006 Jul 28 18:09 agis_schedconf.cvmfs.json
[2025-07-28 19:42:01] -rw------- 1 boinc boinc   1589827 Jul 28 18:09 agis_ddmendpoints.agis.ALL.json
[2025-07-28 19:42:01] drwx------ 4 boinc boinc      4096 Jul 28 18:09 pilot3
[2025-07-28 19:42:01] -rw------- 1 boinc boinc 166814217 Jul 28 19:41 HITS.45759947._000131.pool.root.1
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc       529 Jul 28 19:41 boinc_task_state.xml
[2025-07-28 19:42:01] -rw------- 1 boinc boinc        95 Jul 28 19:41 pilot_heartbeat.json
[2025-07-28 19:42:01] -rw------- 1 boinc boinc      1015 Jul 28 19:41 memory_monitor_summary.json
[2025-07-28 19:42:01] -rw------- 1 boinc boinc    242504 Jul 28 19:41 log.45759947._000131.job.log.tgz.1
[2025-07-28 19:42:01] -rw------- 1 boinc boinc      7733 Jul 28 19:41 heartbeat.json
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc      8192 Jul 28 19:41 boinc_mmap_file
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc        27 Jul 28 19:41 wrapper_checkpoint.txt
[2025-07-28 19:42:01] -rw------- 1 boinc boinc       747 Jul 28 19:42 pilotlog.txt
[2025-07-28 19:42:01] -rw------- 1 boinc boinc    531308 Jul 28 19:42 log.45759947._000131.job.log.1
[2025-07-28 19:42:01] -rw------- 1 boinc boinc       357 Jul 28 19:42 output.list
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc       620 Jul 28 19:42 runtime_log
[2025-07-28 19:42:01] -rw------- 1 boinc boinc    788480 Jul 28 19:42 result.tar.gz
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc      8749 Jul 28 19:42 runtime_log.err
[2025-07-28 19:42:01] -rw------- 1 boinc boinc       662 Jul 28 19:42 lQVNDmS8S07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMaWLDmZ8csnm.diag
[2025-07-28 19:42:01] -rw-r--r-- 1 boinc boinc     21604 Jul 28 19:42 stderr.txt
[2025-07-28 19:42:01] HITS file was successfully produced:
[2025-07-28 19:42:01] -rw------- 1 boinc boinc 166814217 Jul 28 19:41 shared/HITS.pool.root.1
[2025-07-28 19:42:01]  *** Contents of shared directory: ***
[2025-07-28 19:42:01] total 383404
[2025-07-28 19:42:01] -rw-r--r-- 2 boinc boinc 224426804 Jul 28 18:09 ATLAS.root_0
[2025-07-28 19:42:01] -rw-r--r-- 2 boinc boinc    542874 Jul 28 18:09 input.tar.gz
[2025-07-28 19:42:01] -rw-r--r-- 2 boinc boinc     15095 Jul 28 18:09 start_atlas.sh
[2025-07-28 19:42:01] -rw------- 1 boinc boinc 166814217 Jul 28 19:41 HITS.pool.root.1
[2025-07-28 19:42:01] -rw------- 1 boinc boinc    788480 Jul 28 19:42 result.tar.gz
19:42:02 (3871569): run_atlas exited; CPU time 20990.325955
19:42:02 (3871569): called boinc_finish(0)

</stderr_txt>
]]>

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