Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:47:35 (21531): wrapper (7.7.26015): starting
23:47:35 (21531): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 23:47:35] Arguments: --nthreads 12
[2025-07-27 23:47:35] Threads: 12
[2025-07-27 23:47:35] Checking for CVMFS
[2025-07-27 23:47:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:47:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:47:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:47:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:47:35] 2.11.2.0 2947 112875 94868 148834 1 57 14612542 20275201 1 130560 0 38919537 99.971 9802026 9673 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:47:35] CVMFS is ok
[2025-07-27 23:47:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:47:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:47:35] Further information can be found at the LHC@home message board.
[2025-07-27 23:47:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:47:35] Checking for apptainer binary...
[2025-07-27 23:47:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:47:35] Running /usr/bin/apptainer --version
[2025-07-27 23:47:35] apptainer version 1.3.2-1.el7
[2025-07-27 23:47:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:47:37] c-205-18.aglt2.org
[2025-07-27 23:47:37] apptainer works
[2025-07-27 23:47:37] Set ATHENA_PROC_NUMBER=12
[2025-07-27 23:47:37] Set ATHENA_CORE_NUMBER=12
[2025-07-27 23:47:37] Starting ATLAS job with PandaID=6748399444
[2025-07-27 23:47:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:06:42]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:06:42]  lfn=log.45743349._056143.job.log.tgz.1
[2025-07-28 01:06:42]  mtime=0
[2025-07-28 01:06:42]  protocol_id=None
[2025-07-28 01:06:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 01:06:42]  replicas=None
[2025-07-28 01:06:42]  scope=mc23_13p6TeV
[2025-07-28 01:06:42]  status=None
[2025-07-28 01:06:42]  status_code=0
[2025-07-28 01:06:42]  storage_token=
[2025-07-28 01:06:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748399444/log.45743349._056143.job.log.tgz.1
[2025-07-28 01:06:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/13/log.45743349._056143.job.log.tgz.1
[2025-07-28 01:06:42]  workdir=None
[2025-07-28 01:06:42] ]
[2025-07-28 01:06:42] 2025-07-28 05:06:00,518 | INFO     | transferring file log.45743349._056143.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748399444/log.45743349._056143.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 01:06:42] 2025-07-28 05:06:00,518 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748399444/log.45743349._056143.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._056143.job
[2025-07-28 01:06:42] 2025-07-28 05:06:00,540 | INFO     | adding to output.list: log.45743349._056143.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/13/log.45743349._056143.job.log.tg
[2025-07-28 01:06:42] 2025-07-28 05:06:00,541 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 01:06:42] 2025-07-28 05:06:00,541 | INFO     | summary of transferred files:
[2025-07-28 01:06:42] 2025-07-28 05:06:00,541 | INFO     |  -- lfn=log.45743349._056143.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 01:06:42] 2025-07-28 05:06:00,542 | INFO     | stage-out finished correctly
[2025-07-28 01:06:42] 2025-07-28 05:06:01,394 | INFO     | monitor loop #350: job 0:6748399444 is in state 'finished'
[2025-07-28 01:06:42] 2025-07-28 05:06:01,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:06:42] 2025-07-28 05:06:02,737 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 01:06:42] 2025-07-28 05:06:03,897 | INFO     | monitor loop #351: job 0:6748399444 is in state 'finished'
[2025-07-28 01:06:42] 2025-07-28 05:06:03,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:06:42] 2025-07-28 05:06:05,217 | INFO     | job 6748399444 has state=finished
[2025-07-28 01:06:42] 2025-07-28 05:06:05,217 | INFO     | preparing for final server update for job 6748399444 in state='finished'
[2025-07-28 01:06:42] 2025-07-28 05:06:05,218 | INFO     | this job has now completed (state=finished)
[2025-07-28 01:06:42] 2025-07-28 05:06:05,218 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 01:06:42] 2025-07-28 05:06:05,218 | INFO     | log transfer has been attempted: DONE
[2025-07-28 01:06:42] 2025-07-28 05:06:05,218 | INFO     | job 6748399444 has finished - writing final server update
[2025-07-28 01:06:42] 2025-07-28 05:06:05,219 | INFO     | total number of processed events: 400 (read)
[2025-07-28 01:06:42] 2025-07-28 05:06:05,220 | INFO     | executing command: lscpu
[2025-07-28 01:06:42] 2025-07-28 05:06:05,245 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 01:06:42] 2025-07-28 05:06:06,400 | INFO     | monitor loop #352: job 0:6748399444 is in state 'finished'
[2025-07-28 01:06:42] 2025-07-28 05:06:06,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:06:42] 2025-07-28 05:06:08,903 | INFO     | monitor loop #353: job 0:6748399444 is in state 'finished'
[2025-07-28 01:06:42] 2025-07-28 05:06:08,903 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:06:42] 2025-07-28 05:06:10,154 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 01:06:42] 2025-07-28 05:06:10,159 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-28 01:06:42] 2025-07-28 05:06:10,160 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748399444/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:06:42] 2025-07-28 05:06:10,161 | INFO     | extracted standard info from prmon json
[2025-07-28 01:06:42] 2025-07-28 05:06:10,161 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:06:42] 2025-07-28 05:06:10,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:06:42] 2025-07-28 05:06:10,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:06:42] 2025-07-28 05:06:10,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:06:42] 2025-07-28 05:06:10,163 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:06:42] 2025-07-28 05:06:10,163 | INFO     | sum of square deviations: 106336877.5
[2025-07-28 01:06:42] 2025-07-28 05:06:10,164 | INFO     | sum of deviations: -6366010263.999999
[2025-07-28 01:06:42] 2025-07-28 05:06:10,164 | INFO     | mean x: 1753676910.5
[2025-07-28 01:06:42] 2025-07-28 05:06:10,164 | INFO     | mean y: 2736326.1428571427
[2025-07-28 01:06:42] 2025-07-28 05:06:10,164 | INFO     | -- intersect: 104989129329.66891
[2025-07-28 01:06:42] 2025-07-28 05:06:10,164 | INFO     | intersect: 104989129329.66891
[2025-07-28 01:06:42] 2025-07-28 05:06:10,164 | INFO     | chi2: 0.059371393492525425
[2025-07-28 01:06:42] 2025-07-28 05:06:10,164 | INFO     | -- intersect: 104989129329.66891
[2025-07-28 01:06:42] 2025-07-28 05:06:10,165 | INFO     | current memory leak: -59.87 B/s (using 70 data points, chi2=0.06)
[2025-07-28 01:06:42] 2025-07-28 05:06:10,165 | INFO     | could have reported an average CPU frequency of 2024 MHz (6 samples)
[2025-07-28 01:06:42] 2025-07-28 05:06:10,165 | INFO     | ..............................
[2025-07-28 01:06:42] 2025-07-28 05:06:10,165 | INFO     | . Timing measurements:
[2025-07-28 01:06:42] 2025-07-28 05:06:10,165 | INFO     | . get job = 0 s
[2025-07-28 01:06:42] 2025-07-28 05:06:10,165 | INFO     | . initial setup = 2 s
[2025-07-28 01:06:42] 2025-07-28 05:06:10,165 | INFO     | . payload setup = 9 s
[2025-07-28 01:06:42] 2025-07-28 05:06:10,165 | INFO     | . stage-in = 0 s
[2025-07-28 01:06:42] 2025-07-28 05:06:10,166 | INFO     | . payload execution = 4660 s
[2025-07-28 01:06:42] 2025-07-28 05:06:10,166 | INFO     | . stage-out = 0 s
[2025-07-28 01:06:42] 2025-07-28 05:06:10,166 | INFO     | . log creation = 0 s
[2025-07-28 01:06:42] 2025-07-28 05:06:10,166 | INFO     | ..............................
[2025-07-28 01:06:42] 2025-07-28 05:06:10,250 | INFO     | 
[2025-07-28 01:06:42] 2025-07-28 05:06:10,251 | INFO     | job summary report
[2025-07-28 01:06:42] 2025-07-28 05:06:10,251 | INFO     | --------------------------------------------------
[2025-07-28 01:06:42] 2025-07-28 05:06:10,251 | INFO     | PanDA job id: 6748399444
[2025-07-28 01:06:42] 2025-07-28 05:06:10,251 | INFO     | task id: 45743349
[2025-07-28 01:06:42] 2025-07-28 05:06:10,251 | INFO     | errors: (none)
[2025-07-28 01:06:42] 2025-07-28 05:06:10,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:06:42] 2025-07-28 05:06:10,252 | INFO     | pilot state: finished 
[2025-07-28 01:06:42] 2025-07-28 05:06:10,252 | INFO     | transexitcode: 0
[2025-07-28 01:06:42] 2025-07-28 05:06:10,252 | INFO     | exeerrorcode: 0
[2025-07-28 01:06:42] 2025-07-28 05:06:10,252 | INFO     | exeerrordiag: 
[2025-07-28 01:06:42] 2025-07-28 05:06:10,252 | INFO     | exitcode: 0
[2025-07-28 01:06:42] 2025-07-28 05:06:10,252 | INFO     | exitmsg: OK
[2025-07-28 01:06:42] 2025-07-28 05:06:10,252 | INFO     | cpuconsumptiontime: 51563 s
[2025-07-28 01:06:42] 2025-07-28 05:06:10,253 | INFO     | nevents: 400
[2025-07-28 01:06:42] 2025-07-28 05:06:10,253 | INFO     | neventsw: 0
[2025-07-28 01:06:42] 2025-07-28 05:06:10,253 | INFO     | pid: 489
[2025-07-28 01:06:42] 2025-07-28 05:06:10,253 | INFO     | pgrp: 489
[2025-07-28 01:06:42] 2025-07-28 05:06:10,253 | INFO     | corecount: 12
[2025-07-28 01:06:42] 2025-07-28 05:06:10,253 | INFO     | event service: False
[2025-07-28 01:06:42] 2025-07-28 05:06:10,254 | INFO     | sizes: {0: 2396596, 1: 2397452, 6: 2397714, 12: 2397742, 4673: 2423930, 4674: 2432928, 4676: 2433112, 4683: 2433306}
[2025-07-28 01:06:42] 2025-07-28 05:06:10,254 | INFO     | --------------------------------------------------
[2025-07-28 01:06:42] 2025-07-28 05:06:10,254 | INFO     | 
[2025-07-28 01:06:42] 2025-07-28 05:06:10,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 01:06:42] 2025-07-28 05:06:10,278 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,278 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,278 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,278 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,279 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,280 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,280 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,280 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,280 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,280 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:06:42] 2025-07-28 05:06:10,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,281 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:06:42] 2025-07-28 05:06:10,281 | INFO     | job 6748399444 has completed (purged errors)
[2025-07-28 01:06:42] 2025-07-28 05:06:10,281 | INFO     | overall cleanup function is called
[2025-07-28 01:06:42] 2025-07-28 05:06:11,288 | INFO     | --- collectZombieJob: --- 10, [489]
[2025-07-28 01:06:42] 2025-07-28 05:06:11,289 | INFO     | zombie collector waiting for pid 489
[2025-07-28 01:06:42] 2025-07-28 05:06:11,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:06:42] 2025-07-28 05:06:11,289 | INFO     | collected zombie processes
[2025-07-28 01:06:42] 2025-07-28 05:06:11,289 | INFO     | will attempt to kill all subprocesses of pid=489
[2025-07-28 01:06:42] 2025-07-28 05:06:11,380 | INFO     | process IDs to be killed: [489] (in reverse order)
[2025-07-28 01:06:42] 2025-07-28 05:06:11,431 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:06:42] 2025-07-28 05:06:11,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:06:42] 2025-07-28 05:06:11,435 | INFO     | did not find any defunct processes belonging to 489
[2025-07-28 01:06:42] 2025-07-28 05:06:11,439 | INFO     | did not find any defunct processes belonging to 489
[2025-07-28 01:06:42] 2025-07-28 05:06:11,439 | INFO     | ready for new job
[2025-07-28 01:06:42] 2025-07-28 05:06:11,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:06:42] 2025-07-28 05:06:11,440 | INFO     | ***************************************
[2025-07-28 01:06:42] 2025-07-28 05:06:11,440 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:06:42] 2025-07-28 05:06:11,440 | INFO     | ***************************************
[2025-07-28 01:06:42] 2025-07-28 05:06:11,440 | INFO     | 
[2025-07-28 01:06:42] 2025-07-28 05:06:11,441 | INFO     | architecture information:
[2025-07-28 01:06:42] 2025-07-28 05:06:11,441 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:06:42] 2025-07-28 05:06:11,455 | INFO     | cat /etc/os-release:
[2025-07-28 01:06:42] NAME="CentOS Linux"
[2025-07-28 01:06:42] VERSION="7 (Core)"
[2025-07-28 01:06:42] ID="centos"
[2025-07-28 01:06:42] ID_LIKE="rhel fedora"
[2025-07-28 01:06:42] VERSION_ID="7"
[2025-07-28 01:06:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:06:42] ANSI_COLOR="0;31"
[2025-07-28 01:06:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:06:42] HOME_URL="https://www.centos.org/"
[2025-07-28 01:06:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:06:42] 
[2025-07-28 01:06:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:06:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:06:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:06:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:06:42] 
[2025-07-28 01:06:42] 2025-07-28 05:06:11,456 | INFO     | ***************************************
[2025-07-28 01:06:42] 2025-07-28 05:06:11,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 01:06:42] 2025-07-28 05:06:11,975 | INFO     | sufficient remaining disk space (29342302208 B)
[2025-07-28 01:06:42] 2025-07-28 05:06:11,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:06:42] 2025-07-28 05:06:11,976 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:06:42] 2025-07-28 05:06:11,976 | INFO     | update_server=False
[2025-07-28 01:06:42] 2025-07-28 05:06:11,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:06:42] 2025-07-28 05:06:11,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:06:42] 2025-07-28 05:06:11,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:06:42] 2025-07-28 05:06:12,120 | INFO     | all payload control threads have been joined
[2025-07-28 01:06:42] 2025-07-28 05:06:12,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:06:42] 2025-07-28 05:06:12,408 | INFO     | aborting loop
[2025-07-28 01:06:42] 2025-07-28 05:06:12,471 | INFO     | all data control threads have been joined
[2025-07-28 01:06:42] 2025-07-28 05:06:12,981 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:12,982 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:13,125 | INFO     | [payload] control thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:13,271 | INFO     | all job control threads have been joined
[2025-07-28 01:06:42] 2025-07-28 05:06:13,328 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:06:42] 2025-07-28 05:06:13,413 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:13,477 | INFO     | [data] control thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:13,544 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:13,592 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:13,867 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:13,982 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:13,999 | INFO     | [job] validate thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:14,006 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:14,199 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:14,219 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:14,276 | INFO     | [job] control thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:14,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:17,334 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:06:42] 2025-07-28 05:06:18,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587484620608)>', '<ExcThread(monitor, started 140587181250304)>']
[2025-07-28 01:06:42] 2025-07-28 05:06:23,647 | INFO     | all workflow threads have been joined
[2025-07-28 01:06:42] 2025-07-28 05:06:23,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:06:42] 2025-07-28 05:06:23,653 | INFO     | traces error code: 0
[2025-07-28 01:06:42] 2025-07-28 05:06:23,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:06:42] 2025-07-28 05:06:41,824 | INFO     | PID=26429 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 01:06:42] 2025-07-28 05:06:41,826 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:06:42] 2025-07-28 05:06:41,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:06:42] 2025-07-28 05:06:41,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:06:42] 2025-07-28 05:06:41,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:06:42] 2025-07-28 05:06:41,826 | INFO     | [monitor] control thread has ended
[2025-07-28 01:06:42] 2025-07-28 05:06:41,930 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:06:42] 2025-07-28 05:06:41,934 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:06:42] 2025-07-28 05:06:41,938 [wrapper] pilotpid: 26429
[2025-07-28 01:06:42] 2025-07-28 05:06:41,942 [wrapper] Pilot exit status: 0
[2025-07-28 01:06:42] 2025-07-28 05:06:41,958 [wrapper] pandaids: 6748399444
[2025-07-28 01:06:42] 2025-07-28 05:06:41,996 [wrapper] cleanup supervisor_pilot 25104 26430
[2025-07-28 01:06:42] 2025-07-28 05:06:42,000 [wrapper] Test setup, not cleaning
[2025-07-28 01:06:42] 2025-07-28 05:06:42,004 [wrapper] apfmon messages muted
[2025-07-28 01:06:42] 2025-07-28 05:06:42,008 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:06:42] 2025-07-28 05:06:42,012 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:06:42]  *** Error codes and diagnostics ***
[2025-07-28 01:06:42]     "exeErrorCode": 0,
[2025-07-28 01:06:42]     "exeErrorDiag": "",
[2025-07-28 01:06:42]     "pilotErrorCode": 0,
[2025-07-28 01:06:42]     "pilotErrorDiag": "",
[2025-07-28 01:06:42]  *** Listing of results directory ***
[2025-07-28 01:06:42] total 435596
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 22:07 pilot3.tar.gz
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 22:14 queuedata.json
[2025-07-28 01:06:42] -rwx------ 1 boincer umatlas     36292 Jul 27 22:17 runpilot2-wrapper.sh
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas       100 Jul 27 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:06:42] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 23:47 run_atlas
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas       105 Jul 27 23:47 job.xml
[2025-07-28 01:06:42] -rw-r--r-- 2 boincer umatlas 233268462 Jul 27 23:47 EVNT.45743347._002665.pool.root.1
[2025-07-28 01:06:42] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 23:47 start_atlas.sh
[2025-07-28 01:06:42] drwxrwx--x 2 boincer umatlas      4096 Jul 27 23:47 shared
[2025-07-28 01:06:42] -rw-r--r-- 2 boincer umatlas    542906 Jul 27 23:47 input.tar.gz
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas         0 Jul 27 23:47 boinc_lockfile
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas      2562 Jul 27 23:47 pandaJob.out
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas    980117 Jul 27 23:47 agis_schedconf.cvmfs.json
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas   1593052 Jul 27 23:47 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:06:42] drwx------ 4 boincer umatlas      4096 Jul 27 23:47 pilot3
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas      5868 Jul 28 01:04 init_data.xml
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas 207306072 Jul 28 01:05 HITS.45743349._056143.pool.root.1
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas       530 Jul 28 01:05 boinc_task_state.xml
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas        95 Jul 28 01:05 pilot_heartbeat.json
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas      1049 Jul 28 01:05 memory_monitor_summary.json
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas    354888 Jul 28 01:06 log.45743349._056143.job.log.tgz.1
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas      7868 Jul 28 01:06 heartbeat.json
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas        27 Jul 28 01:06 wrapper_checkpoint.txt
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas      8192 Jul 28 01:06 boinc_mmap_file
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas       745 Jul 28 01:06 pilotlog.txt
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas    449037 Jul 28 01:06 log.45743349._056143.job.log.1
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas       357 Jul 28 01:06 output.list
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas       620 Jul 28 01:06 runtime_log
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas    819200 Jul 28 01:06 result.tar.gz
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas       659 Jul 28 01:06 uMqLDmdbS07n9Rq4apOajLDm4fhM0noT9bVof3QYDm9B3KDmRN2b5n.diag
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas      8662 Jul 28 01:06 runtime_log.err
[2025-07-28 01:06:42] -rw-r--r-- 1 boincer umatlas     21679 Jul 28 01:06 stderr.txt
[2025-07-28 01:06:42] HITS file was successfully produced:
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas 207306072 Jul 28 01:05 shared/HITS.pool.root.1
[2025-07-28 01:06:42]  *** Contents of shared directory: ***
[2025-07-28 01:06:42] total 431604
[2025-07-28 01:06:42] -rw-r--r-- 2 boincer umatlas 233268462 Jul 27 23:47 ATLAS.root_0
[2025-07-28 01:06:42] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 23:47 start_atlas.sh
[2025-07-28 01:06:42] -rw-r--r-- 2 boincer umatlas    542906 Jul 27 23:47 input.tar.gz
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas 207306072 Jul 28 01:05 HITS.pool.root.1
[2025-07-28 01:06:42] -rw------- 1 boincer umatlas    819200 Jul 28 01:06 result.tar.gz
01:06:43 (21531): run_atlas exited; CPU time 51534.798556
01:06:43 (21531): called boinc_finish(0)

</stderr_txt>
]]>

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