Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:40:28 (1387888): wrapper (7.7.26015): starting
23:40:28 (1387888): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:40:28] Arguments: --nthreads 8
[2025-07-27 23:40:28] Threads: 8
[2025-07-27 23:40:28] Checking for CVMFS
[2025-07-27 23:40:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:40:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:40:28] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:40:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:40:29] 2.13.1.0 5065 2909 145604 148834 3 324 29260430 40960000 10812 16776704 0 8797835 99.707 5918740 26240 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:40:29] CVMFS is ok
[2025-07-27 23:40:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:40:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:40:29] Further information can be found at the LHC@home message board.
[2025-07-27 23:40:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:40:29] Checking for apptainer binary...
[2025-07-27 23:40:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:40:29] Running /usr/bin/apptainer --version
[2025-07-27 23:40:29] apptainer version 1.4.1-1.el9
[2025-07-27 23:40:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:40:29] c-206-35.aglt2.org
[2025-07-27 23:40:29] apptainer works
[2025-07-27 23:40:29] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:40:29] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:40:29] Starting ATLAS job with PandaID=6748388144
[2025-07-27 23:40:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:11:42]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:11:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 01:11:42]  replicas=None
[2025-07-28 01:11:42]  scope=mc23_13p6TeV
[2025-07-28 01:11:42]  status=None
[2025-07-28 01:11:42]  status_code=0
[2025-07-28 01:11:42]  storage_token=
[2025-07-28 01:11:42]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6748388144/log.45743349._056094.job.log.tgz.1
[2025-07-28 01:11:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/86/log.45743349._056094.job.log.tgz.1
[2025-07-28 01:11:42]  workdir=None
[2025-07-28 01:11:42] ]
[2025-07-28 01:11:42] 2025-07-28 05:11:01,169 | INFO     | transferring file log.45743349._056094.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6748388144/log.45743349._056094.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 01:11:42] 2025-07-28 05:11:01,170 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6748388144/log.45743349._056094.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._056094.job
[2025-07-28 01:11:42] 2025-07-28 05:11:01,186 | INFO     | adding to output.list: log.45743349._056094.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/86/log.45743349._056094.job.log.tg
[2025-07-28 01:11:42] 2025-07-28 05:11:01,187 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 01:11:42] 2025-07-28 05:11:01,187 | INFO     | summary of transferred files:
[2025-07-28 01:11:42] 2025-07-28 05:11:01,187 | INFO     |  -- lfn=log.45743349._056094.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 01:11:42] 2025-07-28 05:11:01,187 | INFO     | stage-out finished correctly
[2025-07-28 01:11:42] 2025-07-28 05:11:01,333 | WARNING  | process 1398497 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 01:11:42] 2025-07-28 05:11:01,333 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6748388144/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:11:42] 2025-07-28 05:11:01,532 | INFO     | number of running child processes to parent process 1398497: 1
[2025-07-28 01:11:42] 2025-07-28 05:11:01,532 | INFO     | maximum number of monitored processes: 6
[2025-07-28 01:11:42] 2025-07-28 05:11:02,680 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 01:11:42] 2025-07-28 05:11:04,035 | INFO     | monitor loop #403: job 0:6748388144 is in state 'finished'
[2025-07-28 01:11:42] 2025-07-28 05:11:04,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:11:42] 2025-07-28 05:11:05,099 | INFO     | job 6748388144 has state=finished
[2025-07-28 01:11:42] 2025-07-28 05:11:05,099 | INFO     | preparing for final server update for job 6748388144 in state='finished'
[2025-07-28 01:11:42] 2025-07-28 05:11:05,100 | INFO     | this job has now completed (state=finished)
[2025-07-28 01:11:42] 2025-07-28 05:11:05,100 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 01:11:42] 2025-07-28 05:11:05,100 | INFO     | log transfer has been attempted: DONE
[2025-07-28 01:11:42] 2025-07-28 05:11:05,100 | INFO     | job 6748388144 has finished - writing final server update
[2025-07-28 01:11:42] 2025-07-28 05:11:05,100 | INFO     | total number of processed events: 400 (read)
[2025-07-28 01:11:42] 2025-07-28 05:11:05,101 | INFO     | executing command: lscpu
[2025-07-28 01:11:42] 2025-07-28 05:11:05,149 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 01:11:42] 2025-07-28 05:11:06,539 | INFO     | monitor loop #404: job 0:6748388144 is in state 'finished'
[2025-07-28 01:11:42] 2025-07-28 05:11:06,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:11:42] 2025-07-28 05:11:09,042 | INFO     | monitor loop #405: job 0:6748388144 is in state 'finished'
[2025-07-28 01:11:42] 2025-07-28 05:11:09,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:11:42] 2025-07-28 05:11:09,641 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 01:11:42] 2025-07-28 05:11:09,645 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3265.314359375
[2025-07-28 01:11:42] 2025-07-28 05:11:09,654 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6748388144/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:11:42] 2025-07-28 05:11:09,655 | INFO     | extracted standard info from prmon json
[2025-07-28 01:11:42] 2025-07-28 05:11:09,655 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:11:42] 2025-07-28 05:11:09,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:11:42] 2025-07-28 05:11:09,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:11:42] 2025-07-28 05:11:09,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:11:42] 2025-07-28 05:11:09,657 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:11:42] 2025-07-28 05:11:09,658 | INFO     | sum of square deviations: 170944600.5
[2025-07-28 01:11:42] 2025-07-28 05:11:09,658 | INFO     | sum of deviations: -14471772461.499996
[2025-07-28 01:11:42] 2025-07-28 05:11:09,658 | INFO     | mean x: 1753676852.5
[2025-07-28 01:11:42] 2025-07-28 05:11:09,658 | INFO     | mean y: 2648397.548780488
[2025-07-28 01:11:42] 2025-07-28 05:11:09,658 | INFO     | -- intersect: 148464853732.7766
[2025-07-28 01:11:42] 2025-07-28 05:11:09,658 | INFO     | intersect: 148464853732.7766
[2025-07-28 01:11:42] 2025-07-28 05:11:09,658 | INFO     | chi2: 0.12032542430894087
[2025-07-28 01:11:42] 2025-07-28 05:11:09,658 | INFO     | -- intersect: 148464853732.7766
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | current memory leak: -84.66 B/s (using 82 data points, chi2=0.12)
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | could have reported an average CPU frequency of 3241 MHz (6 samples)
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | ..............................
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | . Timing measurements:
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | . get job = 0 s
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | . initial setup = 2 s
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | . payload setup = 9 s
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | . stage-in = 0 s
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | . payload execution = 5385 s
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | . stage-out = 0 s
[2025-07-28 01:11:42] 2025-07-28 05:11:09,659 | INFO     | . log creation = 0 s
[2025-07-28 01:11:42] 2025-07-28 05:11:09,660 | INFO     | ..............................
[2025-07-28 01:11:42] 2025-07-28 05:11:09,798 | INFO     | 
[2025-07-28 01:11:42] 2025-07-28 05:11:09,798 | INFO     | job summary report
[2025-07-28 01:11:42] 2025-07-28 05:11:09,798 | INFO     | --------------------------------------------------
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | PanDA job id: 6748388144
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | task id: 45743349
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | errors: (none)
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | pilot state: finished 
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | transexitcode: 0
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | exeerrorcode: 0
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | exeerrordiag: 
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | exitcode: 0
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | exitmsg: OK
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | cpuconsumptiontime: 37518 s
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | nevents: 400
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | neventsw: 0
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | pid: 1398497
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | pgrp: 1398497
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | corecount: 8
[2025-07-28 01:11:42] 2025-07-28 05:11:09,799 | INFO     | event service: False
[2025-07-28 01:11:42] 2025-07-28 05:11:09,800 | INFO     | sizes: {0: 2397484, 6: 2397746, 11: 2397774, 5398: 2424314, 5400: 2433312, 5402: 2433368, 5409: 2433690}
[2025-07-28 01:11:42] 2025-07-28 05:11:09,800 | INFO     | --------------------------------------------------
[2025-07-28 01:11:42] 2025-07-28 05:11:09,800 | INFO     | 
[2025-07-28 01:11:42] 2025-07-28 05:11:09,800 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-28 01:11:42] 2025-07-28 05:11:09,822 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,822 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,824 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:11:42] 2025-07-28 05:11:09,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,824 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:11:42] 2025-07-28 05:11:09,824 | INFO     | job 6748388144 has completed (purged errors)
[2025-07-28 01:11:42] 2025-07-28 05:11:09,824 | INFO     | overall cleanup function is called
[2025-07-28 01:11:42] 2025-07-28 05:11:10,832 | INFO     | --- collectZombieJob: --- 10, [1398497]
[2025-07-28 01:11:42] 2025-07-28 05:11:10,832 | INFO     | zombie collector waiting for pid 1398497
[2025-07-28 01:11:42] 2025-07-28 05:11:10,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:11:42] 2025-07-28 05:11:10,832 | INFO     | collected zombie processes
[2025-07-28 01:11:42] 2025-07-28 05:11:10,832 | INFO     | will attempt to kill all subprocesses of pid=1398497
[2025-07-28 01:11:42] 2025-07-28 05:11:11,041 | INFO     | process IDs to be killed: [1398497] (in reverse order)
[2025-07-28 01:11:42] 2025-07-28 05:11:11,121 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:11:42] 2025-07-28 05:11:11,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:11:42] 2025-07-28 05:11:11,130 | INFO     | did not find any defunct processes belonging to 1398497
[2025-07-28 01:11:42] 2025-07-28 05:11:11,136 | INFO     | did not find any defunct processes belonging to 1398497
[2025-07-28 01:11:42] 2025-07-28 05:11:11,136 | INFO     | ready for new job
[2025-07-28 01:11:42] 2025-07-28 05:11:11,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:11:42] 2025-07-28 05:11:11,138 | INFO     | ***************************************
[2025-07-28 01:11:42] 2025-07-28 05:11:11,138 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:11:42] 2025-07-28 05:11:11,138 | INFO     | ***************************************
[2025-07-28 01:11:42] 2025-07-28 05:11:11,138 | INFO     | 
[2025-07-28 01:11:42] 2025-07-28 05:11:11,141 | INFO     | architecture information:
[2025-07-28 01:11:42] 2025-07-28 05:11:11,141 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:11:42] 2025-07-28 05:11:11,153 | INFO     | cat /etc/os-release:
[2025-07-28 01:11:42] NAME="CentOS Linux"
[2025-07-28 01:11:42] VERSION="7 (Core)"
[2025-07-28 01:11:42] ID="centos"
[2025-07-28 01:11:42] ID_LIKE="rhel fedora"
[2025-07-28 01:11:42] VERSION_ID="7"
[2025-07-28 01:11:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:11:42] ANSI_COLOR="0;31"
[2025-07-28 01:11:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:11:42] HOME_URL="https://www.centos.org/"
[2025-07-28 01:11:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:11:42] 
[2025-07-28 01:11:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:11:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:11:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:11:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:11:42] 
[2025-07-28 01:11:42] 2025-07-28 05:11:11,153 | INFO     | ***************************************
[2025-07-28 01:11:42] 2025-07-28 05:11:11,656 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-28 01:11:42] 2025-07-28 05:11:11,673 | INFO     | sufficient remaining disk space (86169878528 B)
[2025-07-28 01:11:42] 2025-07-28 05:11:11,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:11:42] 2025-07-28 05:11:11,673 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:11:42] 2025-07-28 05:11:11,673 | INFO     | update_server=False
[2025-07-28 01:11:42] 2025-07-28 05:11:11,673 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:11:42] 2025-07-28 05:11:11,674 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:11:42] 2025-07-28 05:11:11,750 | INFO     | all payload control threads have been joined
[2025-07-28 01:11:42] 2025-07-28 05:11:11,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:11:42] 2025-07-28 05:11:12,289 | INFO     | all data control threads have been joined
[2025-07-28 01:11:42] 2025-07-28 05:11:12,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:11:42] 2025-07-28 05:11:12,552 | INFO     | aborting loop
[2025-07-28 01:11:42] 2025-07-28 05:11:12,678 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:12,679 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:12,757 | INFO     | [payload] control thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:12,844 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:12,990 | INFO     | all job control threads have been joined
[2025-07-28 01:11:42] 2025-07-28 05:11:13,056 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:13,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:11:42] 2025-07-28 05:11:13,295 | INFO     | [data] control thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:13,346 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:13,375 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:13,522 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:13,558 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:13,612 | INFO     | [job] validate thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:13,773 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:13,908 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:13,994 | INFO     | [job] control thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:14,114 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:17,272 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:11:42] 2025-07-28 05:11:18,861 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054832301888)>', '<ExcThread(monitor, started 140054118790912)>']
[2025-07-28 01:11:42] 2025-07-28 05:11:23,887 | INFO     | all workflow threads have been joined
[2025-07-28 01:11:42] 2025-07-28 05:11:23,887 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:11:42] 2025-07-28 05:11:23,888 | INFO     | traces error code: 0
[2025-07-28 01:11:42] 2025-07-28 05:11:23,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:11:42] 2025-07-28 05:11:41,934 | INFO     | PID=1392098 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:11:42] 2025-07-28 05:11:41,934 | INFO     | .. there are 10 such processes running
[2025-07-28 01:11:42] 2025-07-28 05:11:41,935 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:11:42] 2025-07-28 05:11:41,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:11:42] 2025-07-28 05:11:41,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:11:42] 2025-07-28 05:11:41,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:11:42] 2025-07-28 05:11:41,935 | INFO     | [monitor] control thread has ended
[2025-07-28 01:11:42] 2025-07-28 05:11:42,147 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:11:42] 2025-07-28 05:11:42,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:11:42] 2025-07-28 05:11:42,157 [wrapper] pilotpid: 1392098
[2025-07-28 01:11:42] 2025-07-28 05:11:42,161 [wrapper] Pilot exit status: 0
[2025-07-28 01:11:42] 2025-07-28 05:11:42,177 [wrapper] pandaids: 6748388144
[2025-07-28 01:11:42] 2025-07-28 05:11:42,244 [wrapper] cleanup supervisor_pilot 1528996 1392099
[2025-07-28 01:11:42] 2025-07-28 05:11:42,248 [wrapper] Test setup, not cleaning
[2025-07-28 01:11:42] 2025-07-28 05:11:42,254 [wrapper] apfmon messages muted
[2025-07-28 01:11:42] 2025-07-28 05:11:42,258 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:11:42] 2025-07-28 05:11:42,263 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:11:42]  *** Error codes and diagnostics ***
[2025-07-28 01:11:42]     "exeErrorCode": 0,
[2025-07-28 01:11:42]     "exeErrorDiag": "",
[2025-07-28 01:11:42]     "pilotErrorCode": 0,
[2025-07-28 01:11:42]     "pilotErrorDiag": "",
[2025-07-28 01:11:42]  *** Listing of results directory ***
[2025-07-28 01:11:42] total 358152
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 21:42 pilot3.tar.gz
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 21:47 queuedata.json
[2025-07-28 01:11:42] -rwx------. 1 boincer umatlas     36292 Jul 27 21:47 runpilot2-wrapper.sh
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:11:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:40 run_atlas
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:40 job.xml
[2025-07-28 01:11:42] -rw-r--r--. 2 boincer umatlas 149050917 Jul 27 23:40 EVNT.45743347._003001.pool.root.1
[2025-07-28 01:11:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:40 start_atlas.sh
[2025-07-28 01:11:42] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:40 shared
[2025-07-28 01:11:42] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 23:40 input.tar.gz
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:40 boinc_lockfile
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas      2572 Jul 27 23:40 pandaJob.out
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas    980117 Jul 27 23:40 agis_schedconf.cvmfs.json
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:40 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:11:42] drwx------. 4 boincer umatlas      4096 Jul 27 23:40 pilot3
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas      6895 Jul 28 01:09 init_data.xml
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas 212138823 Jul 28 01:10 HITS.45743349._056094.pool.root.1
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas       530 Jul 28 01:10 boinc_task_state.xml
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas      1031 Jul 28 01:10 memory_monitor_summary.json
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas    314837 Jul 28 01:11 log.45743349._056094.job.log.tgz.1
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas      7772 Jul 28 01:11 heartbeat.json
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:11 wrapper_checkpoint.txt
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:11 boinc_mmap_file
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas       823 Jul 28 01:11 pilotlog.txt
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas        95 Jul 28 01:11 pilot_heartbeat.json
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas    529061 Jul 28 01:11 log.45743349._056094.job.log.1
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas       357 Jul 28 01:11 output.list
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:11 runtime_log
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas    860160 Jul 28 01:11 result.tar.gz
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas       652 Jul 28 01:11 Zs9KDm28R07n9Rq4apOajLDm4fhM0noT9bVof3QYDmyB3KDmuOVj2n.diag
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas      8660 Jul 28 01:11 runtime_log.err
[2025-07-28 01:11:42] -rw-r--r--. 1 boincer umatlas     21943 Jul 28 01:11 stderr.txt
[2025-07-28 01:11:42] HITS file was successfully produced:
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas 212138823 Jul 28 01:10 shared/HITS.pool.root.1
[2025-07-28 01:11:42]  *** Contents of shared directory: ***
[2025-07-28 01:11:42] total 354120
[2025-07-28 01:11:42] -rw-r--r--. 2 boincer umatlas 149050917 Jul 27 23:40 ATLAS.root_0
[2025-07-28 01:11:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:40 start_atlas.sh
[2025-07-28 01:11:42] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 23:40 input.tar.gz
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas 212138823 Jul 28 01:10 HITS.pool.root.1
[2025-07-28 01:11:42] -rw-------. 1 boincer umatlas    860160 Jul 28 01:11 result.tar.gz
01:11:44 (1387888): run_atlas exited; CPU time 37524.094992
01:11:44 (1387888): called boinc_finish(0)

</stderr_txt>
]]>

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