Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:45:12 (3370236): wrapper (7.7.26015): starting
23:45:12 (3370236): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:45:12] Arguments: --nthreads 8
[2025-07-27 23:45:12] Threads: 8
[2025-07-27 23:45:12] Checking for CVMFS
[2025-07-27 23:45:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:45:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:45:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:45:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:45:12] 2.13.1.0 1602499 13845 211424 148834 3 196 23095059 40960000 15990 16776704 0 80452114 99.753 79265132 35851 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:45:12] CVMFS is ok
[2025-07-27 23:45:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:45:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:45:12] Further information can be found at the LHC@home message board.
[2025-07-27 23:45:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:45:12] Checking for apptainer binary...
[2025-07-27 23:45:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:45:12] Running /usr/bin/apptainer --version
[2025-07-27 23:45:12] apptainer version 1.4.1-1.el9
[2025-07-27 23:45:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:45:13] c-212-17.aglt2.org
[2025-07-27 23:45:13] apptainer works
[2025-07-27 23:45:13] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:45:13] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:45:13] Starting ATLAS job with PandaID=6748387995
[2025-07-27 23:45:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:33:28]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:33:28] 2025-07-28 05:32:52,259 | INFO     | number of running child processes to parent process 3384837: 1
[2025-07-28 01:33:28] 2025-07-28 05:32:52,259 | INFO     | maximum number of monitored processes: 6
[2025-07-28 01:33:28] 2025-07-28 05:32:54,762 | INFO     | monitor loop #454: job 0:6748387995 is in state 'finished'
[2025-07-28 01:33:28] 2025-07-28 05:32:54,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:33:28] 2025-07-28 05:32:54,991 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 01:33:28] 2025-07-28 05:32:55,003 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3188.4589479166666
[2025-07-28 01:33:28] 2025-07-28 05:32:55,016 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748387995/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:33:28] 2025-07-28 05:32:55,016 | INFO     | extracted standard info from prmon json
[2025-07-28 01:33:28] 2025-07-28 05:32:55,016 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:33:28] 2025-07-28 05:32:55,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:33:28] 2025-07-28 05:32:55,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:33:28] 2025-07-28 05:32:55,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:33:28] 2025-07-28 05:32:55,019 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:33:28] 2025-07-28 05:32:55,019 | INFO     | sum of square deviations: 358927660.0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,020 | INFO     | sum of deviations: 13099012327.000002
[2025-07-28 01:33:28] 2025-07-28 05:32:55,020 | INFO     | mean x: 1753677546.0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,020 | INFO     | mean y: 2513301.123809524
[2025-07-28 01:33:28] 2025-07-28 05:32:55,020 | INFO     | -- intersect: -63997691622.16661
[2025-07-28 01:33:28] 2025-07-28 05:32:55,020 | INFO     | intersect: -63997691622.16661
[2025-07-28 01:33:28] 2025-07-28 05:32:55,020 | INFO     | chi2: 1.5969145203458945
[2025-07-28 01:33:28] 2025-07-28 05:32:55,020 | INFO     | sum of square deviations: 310052325.0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,021 | INFO     | sum of deviations: 12377901284.499992
[2025-07-28 01:33:28] 2025-07-28 05:32:55,021 | INFO     | mean x: 1753677393.5
[2025-07-28 01:33:28] 2025-07-28 05:32:55,021 | INFO     | mean y: 2511050.97
[2025-07-28 01:33:28] 2025-07-28 05:32:55,021 | INFO     | -- intersect: -70007754673.05656
[2025-07-28 01:33:28] 2025-07-28 05:32:55,021 | INFO     | intersect: -70007754673.05656
[2025-07-28 01:33:28] 2025-07-28 05:32:55,021 | INFO     | chi2: 1.600948560592934
[2025-07-28 01:33:28] 2025-07-28 05:32:55,021 | INFO     | current chi2=1.600948560592934 (change=-0.2526146638184222 %)
[2025-07-28 01:33:28] 2025-07-28 05:32:55,021 | INFO     | right removable region: 99
[2025-07-28 01:33:28] 2025-07-28 05:32:55,022 | INFO     | sum of square deviations: 310052325.0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,022 | INFO     | sum of deviations: -3386821016.0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,022 | INFO     | mean x: 1753677698.5
[2025-07-28 01:33:28] 2025-07-28 05:32:55,022 | INFO     | mean y: 2563637.78
[2025-07-28 01:33:28] 2025-07-28 05:32:55,022 | INFO     | -- intersect: 19158660869.336998
[2025-07-28 01:33:28] 2025-07-28 05:32:55,022 | INFO     | intersect: 19158660869.336998
[2025-07-28 01:33:28] 2025-07-28 05:32:55,022 | INFO     | chi2: 0.04956666033559036
[2025-07-28 01:33:28] 2025-07-28 05:32:55,022 | INFO     | current chi2=0.04956666033559036 (change=96.8960980876513 %)
[2025-07-28 01:33:28] 2025-07-28 05:32:55,023 | INFO     | sum of square deviations: 265828240.0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,023 | INFO     | sum of deviations: -2113720943.0000002
[2025-07-28 01:33:28] 2025-07-28 05:32:55,023 | INFO     | mean x: 1753677851.0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,023 | INFO     | mean y: 2559216.2421052633
[2025-07-28 01:33:28] 2025-07-28 05:32:55,023 | INFO     | -- intersect: 13946847456.400238
[2025-07-28 01:33:28] 2025-07-28 05:32:55,023 | INFO     | intersect: 13946847456.400238
[2025-07-28 01:33:28] 2025-07-28 05:32:55,023 | INFO     | chi2: 0.047000442463474325
[2025-07-28 01:33:28] 2025-07-28 05:32:55,023 | INFO     | current chi2=0.047000442463474325 (change=5.177306388490759 %)
[2025-07-28 01:33:28] 2025-07-28 05:32:55,024 | INFO     | left removable region: 20
[2025-07-28 01:33:28] 2025-07-28 05:32:55,024 | INFO     | sum of square deviations: 152858680.0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,024 | INFO     | sum of deviations: 1440976770.0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,024 | INFO     | mean x: 1753677973.0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,024 | INFO     | mean y: 2542764.8481012657
[2025-07-28 01:33:28] 2025-07-28 05:32:55,024 | INFO     | -- intersect: -16529127017.683628
[2025-07-28 01:33:28] 2025-07-28 05:32:55,024 | INFO     | intersect: -16529127017.683628
[2025-07-28 01:33:28] 2025-07-28 05:32:55,024 | INFO     | chi2: 0.01911619903644516
[2025-07-28 01:33:28] 2025-07-28 05:32:55,024 | INFO     | -- intersect: -16529127017.683628
[2025-07-28 01:33:28] 2025-07-28 05:32:55,025 | INFO     | current memory leak: 9.43 B/s (using 79 data points, chi2=0.02)
[2025-07-28 01:33:28] 2025-07-28 05:32:55,025 | INFO     | could have reported an average CPU frequency of 3153 MHz (7 samples)
[2025-07-28 01:33:28] 2025-07-28 05:32:55,025 | INFO     | ..............................
[2025-07-28 01:33:28] 2025-07-28 05:32:55,025 | INFO     | . Timing measurements:
[2025-07-28 01:33:28] 2025-07-28 05:32:55,025 | INFO     | . get job = 0 s
[2025-07-28 01:33:28] 2025-07-28 05:32:55,025 | INFO     | . initial setup = 3 s
[2025-07-28 01:33:28] 2025-07-28 05:32:55,025 | INFO     | . payload setup = 12 s
[2025-07-28 01:33:28] 2025-07-28 05:32:55,026 | INFO     | . stage-in = 0 s
[2025-07-28 01:33:28] 2025-07-28 05:32:55,026 | INFO     | . payload execution = 6400 s
[2025-07-28 01:33:28] 2025-07-28 05:32:55,026 | INFO     | . stage-out = 0 s
[2025-07-28 01:33:28] 2025-07-28 05:32:55,026 | INFO     | . log creation = 0 s
[2025-07-28 01:33:28] 2025-07-28 05:32:55,026 | INFO     | ..............................
[2025-07-28 01:33:28] 2025-07-28 05:32:55,111 | INFO     | 
[2025-07-28 01:33:28] 2025-07-28 05:32:55,112 | INFO     | job summary report
[2025-07-28 01:33:28] 2025-07-28 05:32:55,112 | INFO     | --------------------------------------------------
[2025-07-28 01:33:28] 2025-07-28 05:32:55,112 | INFO     | PanDA job id: 6748387995
[2025-07-28 01:33:28] 2025-07-28 05:32:55,112 | INFO     | task id: 45743349
[2025-07-28 01:33:28] 2025-07-28 05:32:55,112 | INFO     | errors: (none)
[2025-07-28 01:33:28] 2025-07-28 05:32:55,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:33:28] 2025-07-28 05:32:55,112 | INFO     | pilot state: finished 
[2025-07-28 01:33:28] 2025-07-28 05:32:55,112 | INFO     | transexitcode: 0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,112 | INFO     | exeerrorcode: 0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,112 | INFO     | exeerrordiag: 
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | exitcode: 0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | exitmsg: OK
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | cpuconsumptiontime: 39338 s
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | nevents: 400
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | neventsw: 0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | pid: 3384837
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | pgrp: 3384837
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | corecount: 8
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | event service: False
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | sizes: {0: 2397313, 1: 2397512, 9: 2397774, 11: 2397802, 6416: 2424923, 6417: 2434105, 6423: 2434243}
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | --------------------------------------------------
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | 
[2025-07-28 01:33:28] 2025-07-28 05:32:55,113 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 01:33:28] 2025-07-28 05:32:55,145 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,147 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:33:28] 2025-07-28 05:32:55,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,147 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:33:28] 2025-07-28 05:32:55,147 | INFO     | job 6748387995 has completed (purged errors)
[2025-07-28 01:33:28] 2025-07-28 05:32:55,147 | INFO     | overall cleanup function is called
[2025-07-28 01:33:28] 2025-07-28 05:32:56,155 | INFO     | --- collectZombieJob: --- 10, [3384837]
[2025-07-28 01:33:28] 2025-07-28 05:32:56,156 | INFO     | zombie collector waiting for pid 3384837
[2025-07-28 01:33:28] 2025-07-28 05:32:56,156 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:33:28] 2025-07-28 05:32:56,156 | INFO     | collected zombie processes
[2025-07-28 01:33:28] 2025-07-28 05:32:56,156 | INFO     | will attempt to kill all subprocesses of pid=3384837
[2025-07-28 01:33:28] 2025-07-28 05:32:56,546 | INFO     | process IDs to be killed: [3384837] (in reverse order)
[2025-07-28 01:33:28] 2025-07-28 05:32:56,681 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:33:28] 2025-07-28 05:32:56,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:33:28] 2025-07-28 05:32:56,700 | INFO     | did not find any defunct processes belonging to 3384837
[2025-07-28 01:33:28] 2025-07-28 05:32:56,718 | INFO     | did not find any defunct processes belonging to 3384837
[2025-07-28 01:33:28] 2025-07-28 05:32:56,718 | INFO     | ready for new job
[2025-07-28 01:33:28] 2025-07-28 05:32:56,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:33:28] 2025-07-28 05:32:56,720 | INFO     | ***************************************
[2025-07-28 01:33:28] 2025-07-28 05:32:56,721 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:33:28] 2025-07-28 05:32:56,721 | INFO     | ***************************************
[2025-07-28 01:33:28] 2025-07-28 05:32:56,721 | INFO     | 
[2025-07-28 01:33:28] 2025-07-28 05:32:56,726 | INFO     | architecture information:
[2025-07-28 01:33:28] 2025-07-28 05:32:56,726 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:33:28] 2025-07-28 05:32:56,746 | INFO     | cat /etc/os-release:
[2025-07-28 01:33:28] NAME="CentOS Linux"
[2025-07-28 01:33:28] VERSION="7 (Core)"
[2025-07-28 01:33:28] ID="centos"
[2025-07-28 01:33:28] ID_LIKE="rhel fedora"
[2025-07-28 01:33:28] VERSION_ID="7"
[2025-07-28 01:33:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:33:28] ANSI_COLOR="0;31"
[2025-07-28 01:33:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:33:28] HOME_URL="https://www.centos.org/"
[2025-07-28 01:33:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:33:28] 
[2025-07-28 01:33:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:33:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:33:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:33:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:33:28] 
[2025-07-28 01:33:28] 2025-07-28 05:32:56,747 | INFO     | ***************************************
[2025-07-28 01:33:28] 2025-07-28 05:32:57,249 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 01:33:28] 2025-07-28 05:32:57,271 | INFO     | sufficient remaining disk space (129985675264 B)
[2025-07-28 01:33:28] 2025-07-28 05:32:57,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:33:28] 2025-07-28 05:32:57,272 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:33:28] 2025-07-28 05:32:57,272 | INFO     | update_server=False
[2025-07-28 01:33:28] 2025-07-28 05:32:57,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:33:28] 2025-07-28 05:32:57,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:33:28] 2025-07-28 05:32:57,411 | INFO     | all data control threads have been joined
[2025-07-28 01:33:28] 2025-07-28 05:32:58,271 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:33:28] 2025-07-28 05:32:58,272 | INFO     | aborting loop
[2025-07-28 01:33:28] 2025-07-28 05:32:58,277 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:58,371 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:58,388 | INFO     | all payload control threads have been joined
[2025-07-28 01:33:28] 2025-07-28 05:32:58,416 | INFO     | [data] control thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:58,533 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:58,610 | INFO     | all job control threads have been joined
[2025-07-28 01:33:28] 2025-07-28 05:32:59,133 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:59,154 | INFO     | [job] validate thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:59,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:33:28] 2025-07-28 05:32:59,277 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:59,278 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:59,331 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:59,394 | INFO     | [payload] control thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:59,610 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:59,615 | INFO     | [job] control thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:59,702 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:32:59,806 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:33:00,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:33:28] 2025-07-28 05:33:01,127 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:33:03,198 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:33:28] 2025-07-28 05:33:04,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139906832754496)>', '<ExcThread(monitor, started 139906177283840)>']
[2025-07-28 01:33:28] 2025-07-28 05:33:09,967 | INFO     | all workflow threads have been joined
[2025-07-28 01:33:28] 2025-07-28 05:33:09,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:33:28] 2025-07-28 05:33:09,968 | INFO     | traces error code: 0
[2025-07-28 01:33:28] 2025-07-28 05:33:09,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:33:28] 2025-07-28 05:33:28,186 | INFO     | PID=3375808 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:33:28] 2025-07-28 05:33:28,187 | INFO     | .. there are 14 such processes running
[2025-07-28 01:33:28] 2025-07-28 05:33:28,187 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:33:28] 2025-07-28 05:33:28,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:33:28] 2025-07-28 05:33:28,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:33:28] 2025-07-28 05:33:28,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:33:28] 2025-07-28 05:33:28,187 | INFO     | [monitor] control thread has ended
[2025-07-28 01:33:28] 2025-07-28 05:33:28,378 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:33:28] 2025-07-28 05:33:28,382 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:33:28] 2025-07-28 05:33:28,388 [wrapper] pilotpid: 3375808
[2025-07-28 01:33:28] 2025-07-28 05:33:28,392 [wrapper] Pilot exit status: 0
[2025-07-28 01:33:28] 2025-07-28 05:33:28,407 [wrapper] pandaids: 6748387995
[2025-07-28 01:33:28] 2025-07-28 05:33:28,506 [wrapper] cleanup supervisor_pilot 4036807 3375809
[2025-07-28 01:33:28] 2025-07-28 05:33:28,511 [wrapper] Test setup, not cleaning
[2025-07-28 01:33:28] 2025-07-28 05:33:28,516 [wrapper] apfmon messages muted
[2025-07-28 01:33:28] 2025-07-28 05:33:28,519 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:33:28] 2025-07-28 05:33:28,526 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:33:28]  *** Error codes and diagnostics ***
[2025-07-28 01:33:28]     "exeErrorCode": 0,
[2025-07-28 01:33:28]     "exeErrorDiag": "",
[2025-07-28 01:33:28]     "pilotErrorCode": 0,
[2025-07-28 01:33:28]     "pilotErrorDiag": "",
[2025-07-28 01:33:28]  *** Listing of results directory ***
[2025-07-28 01:33:28] total 353160
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 21:42 pilot3.tar.gz
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 21:47 queuedata.json
[2025-07-28 01:33:28] -rwx------. 1 boincer umatlas     36292 Jul 27 21:47 runpilot2-wrapper.sh
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:33:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:45 run_atlas
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:45 job.xml
[2025-07-28 01:33:28] -rw-r--r--. 2 boincer umatlas 146088604 Jul 27 23:45 EVNT.45743347._002994.pool.root.1
[2025-07-28 01:33:28] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:45 start_atlas.sh
[2025-07-28 01:33:28] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:45 shared
[2025-07-28 01:33:28] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 23:45 input.tar.gz
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:45 boinc_lockfile
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas      2572 Jul 27 23:45 pandaJob.out
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas    980117 Jul 27 23:45 agis_schedconf.cvmfs.json
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:45 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:33:28] drwx------. 4 boincer umatlas      4096 Jul 27 23:45 pilot3
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas      6943 Jul 28 01:30 init_data.xml
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas 209827973 Jul 28 01:32 HITS.45743349._055976.pool.root.1
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas       529 Jul 28 01:32 boinc_task_state.xml
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas        95 Jul 28 01:32 pilot_heartbeat.json
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas      1032 Jul 28 01:32 memory_monitor_summary.json
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas    312619 Jul 28 01:32 log.45743349._055976.job.log.tgz.1
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas      7773 Jul 28 01:32 heartbeat.json
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:33 wrapper_checkpoint.txt
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:33 boinc_mmap_file
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas       823 Jul 28 01:33 pilotlog.txt
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas    606522 Jul 28 01:33 log.45743349._055976.job.log.1
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas       357 Jul 28 01:33 output.list
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:33 runtime_log
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas    942080 Jul 28 01:33 result.tar.gz
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas      8660 Jul 28 01:33 runtime_log.err
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas       652 Jul 28 01:33 c3uLDm28R07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpZWLDmd52UXo.diag
[2025-07-28 01:33:28] -rw-r--r--. 1 boincer umatlas     21120 Jul 28 01:33 stderr.txt
[2025-07-28 01:33:28] HITS file was successfully produced:
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas 209827973 Jul 28 01:32 shared/HITS.pool.root.1
[2025-07-28 01:33:28]  *** Contents of shared directory: ***
[2025-07-28 01:33:28] total 349052
[2025-07-28 01:33:28] -rw-r--r--. 2 boincer umatlas 146088604 Jul 27 23:45 ATLAS.root_0
[2025-07-28 01:33:28] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:45 start_atlas.sh
[2025-07-28 01:33:28] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 23:45 input.tar.gz
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas 209827973 Jul 28 01:32 HITS.pool.root.1
[2025-07-28 01:33:28] -rw-------. 1 boincer umatlas    942080 Jul 28 01:33 result.tar.gz
01:33:30 (3370236): run_atlas exited; CPU time 39511.598005
01:33:30 (3370236): called boinc_finish(0)

</stderr_txt>
]]>

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