Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:47:47 (564269): wrapper (7.7.26015): starting
20:47:47 (564269): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 20:47:47] Arguments: --nthreads 12
[2025-07-27 20:47:47] Threads: 12
[2025-07-27 20:47:47] Checking for CVMFS
[2025-07-27 20:47:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:47:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:47:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:47:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:47:47] 2.11.5.0 26151 37914 170012 148834 0 283 44689442 45568000 6547 130560 0 291858360 99.766 207707121 30089 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 20:47:47] CVMFS is ok
[2025-07-27 20:47:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:47:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:47:47] Further information can be found at the LHC@home message board.
[2025-07-27 20:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:47:47] Checking for apptainer binary...
[2025-07-27 20:47:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:47:47] Running /usr/bin/apptainer --version
[2025-07-27 20:47:47] apptainer version 1.4.1-1.el9
[2025-07-27 20:47:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:47:47] wns0093.triumf.lcg
[2025-07-27 20:47:47] apptainer works
[2025-07-27 20:47:47] Set ATHENA_PROC_NUMBER=12
[2025-07-27 20:47:47] Set ATHENA_CORE_NUMBER=12
[2025-07-27 20:47:47] Starting ATLAS job with PandaID=6748418624
[2025-07-27 20:47:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:51:06]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | found no stored workdir sizes
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | wrong length of table data, x=[1753674497.0], y=[1095.0] (must be same and length>=4)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | INFO     | could have reported an average CPU frequency of 2509 MHz (4 samples)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | ..............................
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . Timing measurements:
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . get job = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . initial setup = 2 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . payload setup = 3 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . stage-in = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . payload execution = 14 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . stage-out = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . log creation = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | ..............................
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 20:51:06] 2025-07-28 03:50:33,327 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748418624/pilotlog.txt
[2025-07-27 20:51:06] 2025-07-28 03:50:33,336 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 20:51:06] - Log from pilotlog.txt -
[2025-07-27 20:51:06] 2025-07-28 03:50:33,324 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:51:06] 2025-07-28 03:50:33,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | found no stored workdir sizes
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | wrong length of table data, x=[1753674497.0], y=[1095.0] (must be same and length>=4)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | INFO     | could have reported an average CPU frequency of 2509 MHz (4 samples)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | ..............................
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . Timing measurements:
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . get job = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . initial setup = 2 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . payload setup = 3 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . stage-in = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . payload execution = 14 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . stage-out = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . log creation = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | ..............................
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 20:51:06] 2025-07-28 03:50:33,327 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748418624/pilotlog.txt
[2025-07-27 20:51:06] 2025-07-28 03:50:33,337 | WARNING  | 
[2025-07-27 20:51:06] [begin log extracts]
[2025-07-27 20:51:06] - Log from pilotlog.txt -
[2025-07-27 20:51:06] 2025-07-28 03:50:33,324 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:51:06] 2025-07-28 03:50:33,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | found no stored workdir sizes
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | WARNING  | wrong length of table data, x=[1753674497.0], y=[1095.0] (must be same and length>=4)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,325 | INFO     | could have reported an average CPU frequency of 2509 MHz (4 samples)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | ..............................
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . Timing measurements:
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . get job = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . initial setup = 2 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . payload setup = 3 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . stage-in = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . payload execution = 14 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . stage-out = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | . log creation = 0 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | ..............................
[2025-07-27 20:51:06] 2025-07-28 03:50:33,326 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 20:51:06] 2025-07-28 03:50:33,327 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748418624/pilotlog.txt
[2025-07-27 20:51:06] [end log extracts]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,337 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,338 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 20:51:06] 2025-07-28 03:50:33,726 | INFO     | 
[2025-07-27 20:51:06] 2025-07-28 03:50:33,726 | INFO     | job summary report
[2025-07-27 20:51:06] 2025-07-28 03:50:33,726 | INFO     | --------------------------------------------------
[2025-07-27 20:51:06] 2025-07-28 03:50:33,726 | INFO     | PanDA job id: 6748418624
[2025-07-27 20:51:06] 2025-07-28 03:50:33,726 | INFO     | task id: 45743349
[2025-07-27 20:51:06] 2025-07-28 03:50:33,726 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 20:48:24,133 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 20:51:06] 2025-07-28 03:50:33,726 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:51:06] 2025-07-28 03:50:33,726 | INFO     | pilot state: failed 
[2025-07-27 20:51:06] 2025-07-28 03:50:33,726 | INFO     | transexitcode: 65
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | exeerrorcode: 65
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | exitcode: 65
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | cpuconsumptiontime: 15 s
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | nevents: 0
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | neventsw: 0
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | pid: 581932
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | pgrp: 581932
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | corecount: 12
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | event service: False
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | sizes: {0: 2397421, 3: 2397683, 11: 2397711, 21: 2420885, 22: 2425177, 24: 2425205, 143: 2425499}
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | --------------------------------------------------
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | 
[2025-07-27 20:51:06] 2025-07-28 03:50:33,727 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 20:51:06] 2025-07-28 03:50:33,741 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:51:06] 2025-07-28 03:50:33,743 | INFO     | job 6748418624 has completed (purged errors)
[2025-07-27 20:51:06] 2025-07-28 03:50:33,743 | INFO     | overall cleanup function is called
[2025-07-27 20:51:06] 2025-07-28 03:50:34,747 | INFO     | --- collectZombieJob: --- 10, [581932]
[2025-07-27 20:51:06] 2025-07-28 03:50:34,747 | INFO     | zombie collector waiting for pid 581932
[2025-07-27 20:51:06] 2025-07-28 03:50:34,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:51:06] 2025-07-28 03:50:34,748 | INFO     | collected zombie processes
[2025-07-27 20:51:06] 2025-07-28 03:50:34,748 | INFO     | will attempt to kill all subprocesses of pid=581932
[2025-07-27 20:51:06] 2025-07-28 03:50:34,863 | INFO     | process IDs to be killed: [581932] (in reverse order)
[2025-07-27 20:51:06] 2025-07-28 03:50:34,910 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:51:06] 2025-07-28 03:50:34,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:51:06] 2025-07-28 03:50:34,915 | INFO     | did not find any defunct processes belonging to 581932
[2025-07-27 20:51:06] 2025-07-28 03:50:34,920 | INFO     | did not find any defunct processes belonging to 581932
[2025-07-27 20:51:06] 2025-07-28 03:50:34,920 | INFO     | ready for new job
[2025-07-27 20:51:06] 2025-07-28 03:50:34,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:51:06] 2025-07-28 03:50:34,922 | INFO     | ***************************************
[2025-07-27 20:51:06] 2025-07-28 03:50:34,922 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:51:06] 2025-07-28 03:50:34,922 | INFO     | ***************************************
[2025-07-27 20:51:06] 2025-07-28 03:50:34,922 | INFO     | 
[2025-07-27 20:51:06] 2025-07-28 03:50:34,924 | INFO     | architecture information:
[2025-07-27 20:51:06] 2025-07-28 03:50:34,924 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:51:06] 2025-07-28 03:50:34,934 | INFO     | cat /etc/os-release:
[2025-07-27 20:51:06] NAME="CentOS Linux"
[2025-07-27 20:51:06] VERSION="7 (Core)"
[2025-07-27 20:51:06] ID="centos"
[2025-07-27 20:51:06] ID_LIKE="rhel fedora"
[2025-07-27 20:51:06] VERSION_ID="7"
[2025-07-27 20:51:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:51:06] ANSI_COLOR="0;31"
[2025-07-27 20:51:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:51:06] HOME_URL="https://www.centos.org/"
[2025-07-27 20:51:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:51:06] 
[2025-07-27 20:51:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:51:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:51:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:51:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:51:06] 
[2025-07-27 20:51:06] 2025-07-28 03:50:34,934 | INFO     | ***************************************
[2025-07-27 20:51:06] 2025-07-28 03:50:35,437 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 20:51:06] 2025-07-28 03:50:35,448 | INFO     | sufficient remaining disk space (2176447414272 B)
[2025-07-27 20:51:06] 2025-07-28 03:50:35,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:51:06] 2025-07-28 03:50:35,449 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:51:06] 2025-07-28 03:50:35,449 | INFO     | update_server=False
[2025-07-27 20:51:06] 2025-07-28 03:50:35,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:51:06] 2025-07-28 03:50:35,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:51:06] 2025-07-28 03:50:35,502 | INFO     | all data control threads have been joined
[2025-07-27 20:51:06] 2025-07-28 03:50:35,780 | INFO     | all job control threads have been joined
[2025-07-27 20:51:06] 2025-07-28 03:50:36,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:51:06] 2025-07-28 03:50:36,166 | INFO     | aborting loop
[2025-07-27 20:51:06] 2025-07-28 03:50:36,454 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:36,466 | INFO     | all payload control threads have been joined
[2025-07-27 20:51:06] 2025-07-28 03:50:36,507 | INFO     | [data] control thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:36,553 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:36,639 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:36,693 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:36,785 | INFO     | [job] control thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:37,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:51:06] 2025-07-28 03:50:37,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:37,171 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:37,182 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:37,455 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:37,471 | INFO     | [payload] control thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:37,746 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:37,811 | INFO     | [job] validate thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:37,933 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:38,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:51:06] 2025-07-28 03:50:39,412 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:41,015 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:51:06] 2025-07-28 03:50:42,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140481378756416)>', '<ExcThread(monitor, started 140480704661248)>']
[2025-07-27 20:51:06] 2025-07-28 03:50:47,250 | INFO     | all workflow threads have been joined
[2025-07-27 20:51:06] 2025-07-28 03:50:47,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:51:06] 2025-07-28 03:50:47,250 | INFO     | traces error code: 0
[2025-07-27 20:51:06] 2025-07-28 03:50:47,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:51:06] 2025-07-28 03:51:05,893 | INFO     | PID=567857 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 20:51:06] 2025-07-28 03:51:05,893 | INFO     | .. there are 7 such processes running
[2025-07-27 20:51:06] 2025-07-28 03:51:05,894 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:51:06] 2025-07-28 03:51:05,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:51:06] 2025-07-28 03:51:05,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:51:06] 2025-07-28 03:51:05,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:51:06] 2025-07-28 03:51:05,894 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 20:51:06] 2025-07-28 03:51:05,894 | INFO     | [monitor] control thread has ended
[2025-07-27 20:51:06] 2025-07-28 03:51:06,005 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:51:06] 2025-07-28 03:51:06,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:51:06] 2025-07-28 03:51:06,010 [wrapper] pilotpid: 567857
[2025-07-27 20:51:06] 2025-07-28 03:51:06,012 [wrapper] Pilot exit status: 0
[2025-07-27 20:51:06] 2025-07-28 03:51:06,019 [wrapper] pandaids: 6748418624
[2025-07-27 20:51:06] 2025-07-28 03:51:06,049 [wrapper] cleanup supervisor_pilot  567863 567858
[2025-07-27 20:51:06] 2025-07-28 03:51:06,051 [wrapper] Test setup, not cleaning
[2025-07-27 20:51:06] 2025-07-28 03:51:06,053 [wrapper] apfmon messages muted
[2025-07-27 20:51:06] 2025-07-28 03:51:06,055 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:51:06] 2025-07-28 03:51:06,057 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:51:06]  *** Error codes and diagnostics ***
[2025-07-27 20:51:06]     "exeErrorCode": 65,
[2025-07-27 20:51:06]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 20:51:06]     "pilotErrorCode": 1305,
[2025-07-27 20:51:06]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 20:51:06]  *** Listing of results directory ***
[2025-07-27 20:51:06] total 230332
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc    530466 Jul 27 20:07 pilot3.tar.gz
[2025-07-27 20:51:06] -rwx------. 1 boinc boinc     36292 Jul 27 20:32 runpilot2-wrapper.sh
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc      5112 Jul 27 20:32 queuedata.json
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc       100 Jul 27 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:51:06] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 20:47 run_atlas
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc       105 Jul 27 20:47 job.xml
[2025-07-27 20:51:06] -rw-r--r--. 2 boinc boinc 231793635 Jul 27 20:47 EVNT.45743347._002601.pool.root.1
[2025-07-27 20:51:06] -rw-r--r--. 2 boinc boinc     15095 Jul 27 20:47 start_atlas.sh
[2025-07-27 20:51:06] drwxrwx--x. 2 boinc boinc      4096 Jul 27 20:47 shared
[2025-07-27 20:51:06] -rw-r--r--. 2 boinc boinc    542905 Jul 27 20:47 input.tar.gz
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc      6596 Jul 27 20:47 init_data.xml
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc         0 Jul 27 20:47 boinc_lockfile
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc      2562 Jul 27 20:47 pandaJob.out
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc    980117 Jul 27 20:47 agis_schedconf.cvmfs.json
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc   1593052 Jul 27 20:47 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:51:06] drwx------. 4 boinc boinc      4096 Jul 27 20:47 pilot3
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc       522 Jul 27 20:48 boinc_task_state.xml
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc       962 Jul 27 20:48 memory_monitor_summary.json
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc     20150 Jul 27 20:48 log.45743349._056181.job.log.tgz.1
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc      8365 Jul 27 20:50 heartbeat.json
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc        22 Jul 27 20:51 wrapper_checkpoint.txt
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc        95 Jul 27 20:51 pilot_heartbeat.json
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc       891 Jul 27 20:51 pilotlog.txt
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc     74404 Jul 27 20:51 log.45743349._056181.job.log.1
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc       188 Jul 27 20:51 output.list
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc       620 Jul 27 20:51 runtime_log
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc    112640 Jul 27 20:51 result.tar.gz
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc      8485 Jul 27 20:51 runtime_log.err
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc       644 Jul 27 20:51 PSVMDmTmT07n9Rq4apOajLDm4fhM0noT9bVof3QYDmMC3KDmJxBPjn.diag
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc      8192 Jul 27 20:51 boinc_mmap_file
[2025-07-27 20:51:06] -rw-r--r--. 1 boinc boinc     21619 Jul 27 20:51 stderr.txt
[2025-07-27 20:51:06] No HITS result produced
[2025-07-27 20:51:06]  *** Contents of shared directory: ***
[2025-07-27 20:51:06] total 227028
[2025-07-27 20:51:06] -rw-r--r--. 2 boinc boinc 231793635 Jul 27 20:47 ATLAS.root_0
[2025-07-27 20:51:06] -rw-r--r--. 2 boinc boinc     15095 Jul 27 20:47 start_atlas.sh
[2025-07-27 20:51:06] -rw-r--r--. 2 boinc boinc    542905 Jul 27 20:47 input.tar.gz
[2025-07-27 20:51:06] -rw-------. 1 boinc boinc    112640 Jul 27 20:51 result.tar.gz
20:51:07 (564269): run_atlas exited; CPU time 18.178000
20:51:07 (564269): called boinc_finish(0)

</stderr_txt>
]]>

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