Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:51:19 (4178929): wrapper (7.7.26015): starting
23:51:19 (4178929): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:51:19] Arguments: --nthreads 8
[2025-07-27 23:51:19] Threads: 8
[2025-07-27 23:51:19] Checking for CVMFS
[2025-07-27 23:51:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:51:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:51:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:51:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:51:20] 2.13.1.0 641173 15093 240644 148834 0 236 39778583 40960001 14292 16776704 0 52773436 99.809 51581946 40057 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:51:20] CVMFS is ok
[2025-07-27 23:51:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:51:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:51:20] Further information can be found at the LHC@home message board.
[2025-07-27 23:51:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:51:20] Checking for apptainer binary...
[2025-07-27 23:51:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:51:20] Running /usr/bin/apptainer --version
[2025-07-27 23:51:20] apptainer version 1.4.1-1.el9
[2025-07-27 23:51:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:51:20] c-212-8.aglt2.org
[2025-07-27 23:51:20] apptainer works
[2025-07-27 23:51:20] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:51:20] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:51:20] Starting ATLAS job with PandaID=6748388019
[2025-07-27 23:51:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:21:54]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:21:54]  protocol_id=None
[2025-07-28 01:21:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 01:21:54]  replicas=None
[2025-07-28 01:21:54]  scope=mc23_13p6TeV
[2025-07-28 01:21:54]  status=None
[2025-07-28 01:21:54]  status_code=0
[2025-07-28 01:21:54]  storage_token=
[2025-07-28 01:21:54]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6748388019/log.45743349._056000.job.log.tgz.1
[2025-07-28 01:21:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/bf/log.45743349._056000.job.log.tgz.1
[2025-07-28 01:21:54]  workdir=None
[2025-07-28 01:21:54] ]
[2025-07-28 01:21:54] 2025-07-28 05:21:12,005 | INFO     | transferring file log.45743349._056000.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6748388019/log.45743349._056000.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 01:21:54] 2025-07-28 05:21:12,005 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6748388019/log.45743349._056000.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._056000.job
[2025-07-28 01:21:54] 2025-07-28 05:21:12,033 | INFO     | adding to output.list: log.45743349._056000.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/bf/log.45743349._056000.job.log.tg
[2025-07-28 01:21:54] 2025-07-28 05:21:12,034 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 01:21:54] 2025-07-28 05:21:12,034 | INFO     | summary of transferred files:
[2025-07-28 01:21:54] 2025-07-28 05:21:12,034 | INFO     |  -- lfn=log.45743349._056000.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 01:21:54] 2025-07-28 05:21:12,034 | INFO     | stage-out finished correctly
[2025-07-28 01:21:54] 2025-07-28 05:21:13,426 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 01:21:54] 2025-07-28 05:21:13,965 | INFO     | job 6748388019 has state=finished
[2025-07-28 01:21:54] 2025-07-28 05:21:13,965 | INFO     | preparing for final server update for job 6748388019 in state='finished'
[2025-07-28 01:21:54] 2025-07-28 05:21:13,965 | INFO     | this job has now completed (state=finished)
[2025-07-28 01:21:54] 2025-07-28 05:21:13,966 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 01:21:54] 2025-07-28 05:21:13,966 | INFO     | log transfer has been attempted: DONE
[2025-07-28 01:21:54] 2025-07-28 05:21:13,966 | INFO     | job 6748388019 has finished - writing final server update
[2025-07-28 01:21:54] 2025-07-28 05:21:13,966 | INFO     | total number of processed events: 400 (read)
[2025-07-28 01:21:54] 2025-07-28 05:21:13,968 | INFO     | executing command: lscpu
[2025-07-28 01:21:54] 2025-07-28 05:21:14,037 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 01:21:54] 2025-07-28 05:21:17,033 | WARNING  | process 4191490 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 01:21:54] 2025-07-28 05:21:17,034 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6748388019/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:21:54] 2025-07-28 05:21:17,387 | INFO     | PID=4183509 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 01:21:54] 2025-07-28 05:21:17,387 | INFO     | .. there are 17 such processes running
[2025-07-28 01:21:54] 2025-07-28 05:21:17,578 | INFO     | number of running child processes to parent process 4191490: 1
[2025-07-28 01:21:54] 2025-07-28 05:21:17,578 | INFO     | maximum number of monitored processes: 6
[2025-07-28 01:21:54] 2025-07-28 05:21:20,081 | INFO     | monitor loop #392: job 0:6748388019 is in state 'finished'
[2025-07-28 01:21:54] 2025-07-28 05:21:20,082 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:21:54] 2025-07-28 05:21:20,963 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 01:21:54] 2025-07-28 05:21:20,969 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3040.7251770833336
[2025-07-28 01:21:54] 2025-07-28 05:21:20,984 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6748388019/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:21:54] 2025-07-28 05:21:20,985 | INFO     | extracted standard info from prmon json
[2025-07-28 01:21:54] 2025-07-28 05:21:20,985 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:21:54] 2025-07-28 05:21:20,985 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:21:54] 2025-07-28 05:21:20,986 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:21:54] 2025-07-28 05:21:20,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:21:54] 2025-07-28 05:21:20,987 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:21:54] 2025-07-28 05:21:20,987 | INFO     | sum of square deviations: 164765880.0
[2025-07-28 01:21:54] 2025-07-28 05:21:20,988 | INFO     | sum of deviations: -4242572692.0000014
[2025-07-28 01:21:54] 2025-07-28 05:21:20,988 | INFO     | mean x: 1753677487.0
[2025-07-28 01:21:54] 2025-07-28 05:21:20,988 | INFO     | mean y: 2568498.1975308643
[2025-07-28 01:21:54] 2025-07-28 05:21:20,988 | INFO     | -- intersect: 45158180915.77687
[2025-07-28 01:21:54] 2025-07-28 05:21:20,988 | INFO     | intersect: 45158180915.77687
[2025-07-28 01:21:54] 2025-07-28 05:21:20,988 | INFO     | chi2: 0.038880851227805754
[2025-07-28 01:21:54] 2025-07-28 05:21:20,988 | INFO     | -- intersect: 45158180915.77687
[2025-07-28 01:21:54] 2025-07-28 05:21:20,989 | INFO     | current memory leak: -25.75 B/s (using 81 data points, chi2=0.04)
[2025-07-28 01:21:54] 2025-07-28 05:21:20,989 | INFO     | could have reported an average CPU frequency of 3000 MHz (6 samples)
[2025-07-28 01:21:54] 2025-07-28 05:21:20,989 | INFO     | ..............................
[2025-07-28 01:21:54] 2025-07-28 05:21:20,989 | INFO     | . Timing measurements:
[2025-07-28 01:21:54] 2025-07-28 05:21:20,989 | INFO     | . get job = 0 s
[2025-07-28 01:21:54] 2025-07-28 05:21:20,989 | INFO     | . initial setup = 2 s
[2025-07-28 01:21:54] 2025-07-28 05:21:20,989 | INFO     | . payload setup = 13 s
[2025-07-28 01:21:54] 2025-07-28 05:21:20,989 | INFO     | . stage-in = 0 s
[2025-07-28 01:21:54] 2025-07-28 05:21:20,989 | INFO     | . payload execution = 5333 s
[2025-07-28 01:21:54] 2025-07-28 05:21:20,990 | INFO     | . stage-out = 0 s
[2025-07-28 01:21:54] 2025-07-28 05:21:20,990 | INFO     | . log creation = 0 s
[2025-07-28 01:21:54] 2025-07-28 05:21:20,990 | INFO     | ..............................
[2025-07-28 01:21:54] 2025-07-28 05:21:21,065 | INFO     | 
[2025-07-28 01:21:54] 2025-07-28 05:21:21,065 | INFO     | job summary report
[2025-07-28 01:21:54] 2025-07-28 05:21:21,066 | INFO     | --------------------------------------------------
[2025-07-28 01:21:54] 2025-07-28 05:21:21,066 | INFO     | PanDA job id: 6748388019
[2025-07-28 01:21:54] 2025-07-28 05:21:21,066 | INFO     | task id: 45743349
[2025-07-28 01:21:54] 2025-07-28 05:21:21,066 | INFO     | errors: (none)
[2025-07-28 01:21:54] 2025-07-28 05:21:21,066 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | pilot state: finished 
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | transexitcode: 0
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | exeerrorcode: 0
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | exeerrordiag: 
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | exitcode: 0
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | exitmsg: OK
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | cpuconsumptiontime: 38981 s
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | nevents: 400
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | neventsw: 0
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | pid: 4191490
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | pgrp: 4191490
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | corecount: 8
[2025-07-28 01:21:54] 2025-07-28 05:21:21,067 | INFO     | event service: False
[2025-07-28 01:21:54] 2025-07-28 05:21:21,068 | INFO     | sizes: {0: 2396656, 1: 2397512, 9: 2397774, 12: 2397802, 5350: 2424227, 5351: 2424226, 5353: 2433408, 5354: 2433464, 5362: 2433658}
[2025-07-28 01:21:54] 2025-07-28 05:21:21,068 | INFO     | --------------------------------------------------
[2025-07-28 01:21:54] 2025-07-28 05:21:21,068 | INFO     | 
[2025-07-28 01:21:54] 2025-07-28 05:21:21,068 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-28 01:21:54] 2025-07-28 05:21:21,091 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,092 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,093 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,093 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:21:54] 2025-07-28 05:21:21,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,093 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:21:54] 2025-07-28 05:21:21,093 | INFO     | job 6748388019 has completed (purged errors)
[2025-07-28 01:21:54] 2025-07-28 05:21:21,093 | INFO     | overall cleanup function is called
[2025-07-28 01:21:54] 2025-07-28 05:21:22,101 | INFO     | --- collectZombieJob: --- 10, [4191490]
[2025-07-28 01:21:54] 2025-07-28 05:21:22,102 | INFO     | zombie collector waiting for pid 4191490
[2025-07-28 01:21:54] 2025-07-28 05:21:22,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:21:54] 2025-07-28 05:21:22,103 | INFO     | collected zombie processes
[2025-07-28 01:21:54] 2025-07-28 05:21:22,103 | INFO     | will attempt to kill all subprocesses of pid=4191490
[2025-07-28 01:21:54] 2025-07-28 05:21:22,479 | INFO     | process IDs to be killed: [4191490] (in reverse order)
[2025-07-28 01:21:54] 2025-07-28 05:21:22,626 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:21:54] 2025-07-28 05:21:22,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:21:54] 2025-07-28 05:21:22,642 | INFO     | did not find any defunct processes belonging to 4191490
[2025-07-28 01:21:54] 2025-07-28 05:21:22,658 | INFO     | did not find any defunct processes belonging to 4191490
[2025-07-28 01:21:54] 2025-07-28 05:21:22,659 | INFO     | ready for new job
[2025-07-28 01:21:54] 2025-07-28 05:21:22,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:21:54] 2025-07-28 05:21:22,660 | INFO     | ***************************************
[2025-07-28 01:21:54] 2025-07-28 05:21:22,661 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:21:54] 2025-07-28 05:21:22,661 | INFO     | ***************************************
[2025-07-28 01:21:54] 2025-07-28 05:21:22,661 | INFO     | 
[2025-07-28 01:21:54] 2025-07-28 05:21:22,666 | INFO     | architecture information:
[2025-07-28 01:21:54] 2025-07-28 05:21:22,666 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:21:54] 2025-07-28 05:21:22,686 | INFO     | cat /etc/os-release:
[2025-07-28 01:21:54] NAME="CentOS Linux"
[2025-07-28 01:21:54] VERSION="7 (Core)"
[2025-07-28 01:21:54] ID="centos"
[2025-07-28 01:21:54] ID_LIKE="rhel fedora"
[2025-07-28 01:21:54] VERSION_ID="7"
[2025-07-28 01:21:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:21:54] ANSI_COLOR="0;31"
[2025-07-28 01:21:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:21:54] HOME_URL="https://www.centos.org/"
[2025-07-28 01:21:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:21:54] 
[2025-07-28 01:21:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:21:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:21:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:21:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:21:54] 
[2025-07-28 01:21:54] 2025-07-28 05:21:22,687 | INFO     | ***************************************
[2025-07-28 01:21:54] 2025-07-28 05:21:23,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-28 01:21:54] 2025-07-28 05:21:23,211 | INFO     | sufficient remaining disk space (129511718912 B)
[2025-07-28 01:21:54] 2025-07-28 05:21:23,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:21:54] 2025-07-28 05:21:23,211 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:21:54] 2025-07-28 05:21:23,211 | INFO     | update_server=False
[2025-07-28 01:21:54] 2025-07-28 05:21:23,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:21:54] 2025-07-28 05:21:23,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:21:54] 2025-07-28 05:21:23,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:21:54] 2025-07-28 05:21:23,591 | INFO     | aborting loop
[2025-07-28 01:21:54] 2025-07-28 05:21:23,614 | INFO     | all data control threads have been joined
[2025-07-28 01:21:54] 2025-07-28 05:21:23,780 | INFO     | all job control threads have been joined
[2025-07-28 01:21:54] 2025-07-28 05:21:24,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:21:54] 2025-07-28 05:21:24,216 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:24,504 | INFO     | all payload control threads have been joined
[2025-07-28 01:21:54] 2025-07-28 05:21:24,595 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:24,619 | INFO     | [data] control thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:24,786 | INFO     | [job] control thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:24,912 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:24,958 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:25,100 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:25,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:25,108 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:25,218 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:25,359 | INFO     | [job] validate thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:25,506 | INFO     | [payload] control thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:25,513 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:25,563 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:26,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:21:54] 2025-07-28 05:21:27,081 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:28,018 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:21:54] 2025-07-28 05:21:28,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474191202112)>', '<ExcThread(monitor, started 140473456903936)>']
[2025-07-28 01:21:54] 2025-07-28 05:21:33,611 | INFO     | all workflow threads have been joined
[2025-07-28 01:21:54] 2025-07-28 05:21:33,611 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:21:54] 2025-07-28 05:21:33,612 | INFO     | traces error code: 0
[2025-07-28 01:21:54] 2025-07-28 05:21:33,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:21:54] 2025-07-28 05:21:35,597 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-07-28 01:21:54] 2025-07-28 05:21:53,922 | INFO     | PID=4183509 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:21:54] 2025-07-28 05:21:53,922 | INFO     | .. there are 17 such processes running
[2025-07-28 01:21:54] 2025-07-28 05:21:53,922 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:21:54] 2025-07-28 05:21:53,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:21:54] 2025-07-28 05:21:53,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:21:54] 2025-07-28 05:21:53,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:21:54] 2025-07-28 05:21:53,922 | INFO     | [monitor] control thread has ended
[2025-07-28 01:21:54] 2025-07-28 05:21:54,087 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:21:54] 2025-07-28 05:21:54,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:21:54] 2025-07-28 05:21:54,101 [wrapper] pilotpid: 4183509
[2025-07-28 01:21:54] 2025-07-28 05:21:54,106 [wrapper] Pilot exit status: 0
[2025-07-28 01:21:54] 2025-07-28 05:21:54,125 [wrapper] pandaids: 6748388019
[2025-07-28 01:21:54] 2025-07-28 05:21:54,221 [wrapper] cleanup supervisor_pilot  366853 4183510
[2025-07-28 01:21:54] 2025-07-28 05:21:54,228 [wrapper] Test setup, not cleaning
[2025-07-28 01:21:54] 2025-07-28 05:21:54,232 [wrapper] apfmon messages muted
[2025-07-28 01:21:54] 2025-07-28 05:21:54,236 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:21:54] 2025-07-28 05:21:54,240 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:21:54]  *** Error codes and diagnostics ***
[2025-07-28 01:21:54]     "exeErrorCode": 0,
[2025-07-28 01:21:54]     "exeErrorDiag": "",
[2025-07-28 01:21:54]     "pilotErrorCode": 0,
[2025-07-28 01:21:54]     "pilotErrorDiag": "",
[2025-07-28 01:21:54]  *** Listing of results directory ***
[2025-07-28 01:21:54] total 352884
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 21:42 pilot3.tar.gz
[2025-07-28 01:21:54] -rwx------. 1 boincer umatlas     36292 Jul 27 21:47 runpilot2-wrapper.sh
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 21:47 queuedata.json
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:21:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:51 run_atlas
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:51 job.xml
[2025-07-28 01:21:54] -rw-r--r--. 2 boincer umatlas 146728878 Jul 27 23:51 EVNT.45743347._002995.pool.root.1
[2025-07-28 01:21:54] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:51 shared
[2025-07-28 01:21:54] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 23:51 input.tar.gz
[2025-07-28 01:21:54] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:51 start_atlas.sh
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:51 boinc_lockfile
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas      2572 Jul 27 23:51 pandaJob.out
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas    980117 Jul 27 23:51 agis_schedconf.cvmfs.json
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:51 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:21:54] drwx------. 4 boincer umatlas      4096 Jul 27 23:51 pilot3
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas      6943 Jul 28 01:13 init_data.xml
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas 209087425 Jul 28 01:20 HITS.45743349._056000.pool.root.1
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas       529 Jul 28 01:20 boinc_task_state.xml
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas      1031 Jul 28 01:21 memory_monitor_summary.json
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas    310376 Jul 28 01:21 log.45743349._056000.job.log.tgz.1
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas        95 Jul 28 01:21 pilot_heartbeat.json
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas      7767 Jul 28 01:21 heartbeat.json
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:21 boinc_mmap_file
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:21 wrapper_checkpoint.txt
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas       823 Jul 28 01:21 pilotlog.txt
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas    517868 Jul 28 01:21 log.45743349._056000.job.log.1
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas       357 Jul 28 01:21 output.list
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:21 runtime_log
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas    849920 Jul 28 01:21 result.tar.gz
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas       651 Jul 28 01:21 ydGODm18R07n9Rq4apOajLDm4fhM0noT9bVof3QYDmDB3KDmxrkgPo.diag
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas      8655 Jul 28 01:21 runtime_log.err
[2025-07-28 01:21:54] -rw-r--r--. 1 boincer umatlas     21929 Jul 28 01:21 stderr.txt
[2025-07-28 01:21:54] HITS file was successfully produced:
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas 209087425 Jul 28 01:20 shared/HITS.pool.root.1
[2025-07-28 01:21:54]  *** Contents of shared directory: ***
[2025-07-28 01:21:54] total 348868
[2025-07-28 01:21:54] -rw-r--r--. 2 boincer umatlas 146728878 Jul 27 23:51 ATLAS.root_0
[2025-07-28 01:21:54] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 23:51 input.tar.gz
[2025-07-28 01:21:54] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:51 start_atlas.sh
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas 209087425 Jul 28 01:20 HITS.pool.root.1
[2025-07-28 01:21:54] -rw-------. 1 boincer umatlas    849920 Jul 28 01:21 result.tar.gz
01:21:56 (4178929): run_atlas exited; CPU time 39109.414914
01:21:56 (4178929): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN