Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:29:38 (28719): wrapper (7.7.26015): starting
23:29:38 (28719): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 23:29:38] Arguments: --nthreads 12
[2025-07-27 23:29:38] Threads: 12
[2025-07-27 23:29:38] Checking for CVMFS
[2025-07-27 23:29:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:29:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:29:38] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:29:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:29:38] 2.11.2.0 3081 112856 101244 148834 0 57 14942281 20275200 1 130560 0 38978232 99.970 9661386 10550 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 23:29:38] CVMFS is ok
[2025-07-27 23:29:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:29:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:29:38] Further information can be found at the LHC@home message board.
[2025-07-27 23:29:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:29:38] Checking for apptainer binary...
[2025-07-27 23:29:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:29:38] Running /usr/bin/apptainer --version
[2025-07-27 23:29:38] apptainer version 1.3.2-1.el7
[2025-07-27 23:29:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:29:40] c-205-29.aglt2.org
[2025-07-27 23:29:40] apptainer works
[2025-07-27 23:29:40] Set ATHENA_PROC_NUMBER=12
[2025-07-27 23:29:40] Set ATHENA_CORE_NUMBER=12
[2025-07-27 23:29:40] Starting ATLAS job with PandaID=6748387874
[2025-07-27 23:29:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:51:46]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:51:46]  is_altstaged=None
[2025-07-28 00:51:46]  is_tar=False
[2025-07-28 00:51:46]  lfn=log.45743349._055855.job.log.tgz.1
[2025-07-28 00:51:46]  mtime=0
[2025-07-28 00:51:46]  protocol_id=None
[2025-07-28 00:51:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 00:51:46]  replicas=None
[2025-07-28 00:51:46]  scope=mc23_13p6TeV
[2025-07-28 00:51:46]  status=None
[2025-07-28 00:51:46]  status_code=0
[2025-07-28 00:51:46]  storage_token=
[2025-07-28 00:51:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748387874/log.45743349._055855.job.log.tgz.1
[2025-07-28 00:51:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/54/log.45743349._055855.job.log.tgz.1
[2025-07-28 00:51:46]  workdir=None
[2025-07-28 00:51:46] ]
[2025-07-28 00:51:46] 2025-07-28 04:51:06,056 | INFO     | transferring file log.45743349._055855.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748387874/log.45743349._055855.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 00:51:46] 2025-07-28 04:51:06,056 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748387874/log.45743349._055855.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._055855.job
[2025-07-28 00:51:46] 2025-07-28 04:51:06,078 | INFO     | adding to output.list: log.45743349._055855.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/54/log.45743349._055855.job.log.tg
[2025-07-28 00:51:46] 2025-07-28 04:51:06,079 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:51:46] 2025-07-28 04:51:06,079 | INFO     | summary of transferred files:
[2025-07-28 00:51:46] 2025-07-28 04:51:06,079 | INFO     |  -- lfn=log.45743349._055855.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:51:46] 2025-07-28 04:51:06,079 | INFO     | stage-out finished correctly
[2025-07-28 00:51:46] 2025-07-28 04:51:06,775 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:51:46] 2025-07-28 04:51:06,902 | INFO     | monitor loop #363: job 0:6748387874 is in state 'finished'
[2025-07-28 00:51:46] 2025-07-28 04:51:06,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:51:46] 2025-07-28 04:51:09,370 | INFO     | job 6748387874 has state=finished
[2025-07-28 00:51:46] 2025-07-28 04:51:09,370 | INFO     | preparing for final server update for job 6748387874 in state='finished'
[2025-07-28 00:51:46] 2025-07-28 04:51:09,371 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:51:46] 2025-07-28 04:51:09,371 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:51:46] 2025-07-28 04:51:09,371 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:51:46] 2025-07-28 04:51:09,371 | INFO     | job 6748387874 has finished - writing final server update
[2025-07-28 00:51:46] 2025-07-28 04:51:09,372 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:51:46] 2025-07-28 04:51:09,373 | INFO     | executing command: lscpu
[2025-07-28 00:51:46] 2025-07-28 04:51:09,398 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:51:46] 2025-07-28 04:51:09,404 | INFO     | monitor loop #364: job 0:6748387874 is in state 'finished'
[2025-07-28 00:51:46] 2025-07-28 04:51:09,404 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:51:46] 2025-07-28 04:51:11,908 | INFO     | monitor loop #365: job 0:6748387874 is in state 'finished'
[2025-07-28 00:51:46] 2025-07-28 04:51:11,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:51:46] 2025-07-28 04:51:14,298 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 00:51:46] 2025-07-28 04:51:14,302 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-07-28 00:51:46] 2025-07-28 04:51:14,304 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748387874/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:51:46] 2025-07-28 04:51:14,305 | INFO     | extracted standard info from prmon json
[2025-07-28 00:51:46] 2025-07-28 04:51:14,305 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:51:46] 2025-07-28 04:51:14,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:51:46] 2025-07-28 04:51:14,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:51:46] 2025-07-28 04:51:14,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:51:46] 2025-07-28 04:51:14,307 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:51:46] 2025-07-28 04:51:14,307 | INFO     | sum of square deviations: 120605052.0
[2025-07-28 00:51:46] 2025-07-28 04:51:14,308 | INFO     | sum of deviations: -9788618272.000002
[2025-07-28 00:51:46] 2025-07-28 04:51:14,308 | INFO     | mean x: 1753675926.0
[2025-07-28 00:51:46] 2025-07-28 04:51:14,308 | INFO     | mean y: 2813886.97260274
[2025-07-28 00:51:46] 2025-07-28 04:51:14,308 | INFO     | -- intersect: 142335692383.72183
[2025-07-28 00:51:46] 2025-07-28 04:51:14,308 | INFO     | intersect: 142335692383.72183
[2025-07-28 00:51:46] 2025-07-28 04:51:14,308 | INFO     | chi2: 0.06640437338668703
[2025-07-28 00:51:46] 2025-07-28 04:51:14,308 | INFO     | -- intersect: 142335692383.72183
[2025-07-28 00:51:46] 2025-07-28 04:51:14,309 | INFO     | current memory leak: -81.16 B/s (using 73 data points, chi2=0.07)
[2025-07-28 00:51:46] 2025-07-28 04:51:14,309 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-07-28 00:51:46] 2025-07-28 04:51:14,309 | INFO     | ..............................
[2025-07-28 00:51:46] 2025-07-28 04:51:14,309 | INFO     | . Timing measurements:
[2025-07-28 00:51:46] 2025-07-28 04:51:14,309 | INFO     | . get job = 0 s
[2025-07-28 00:51:46] 2025-07-28 04:51:14,309 | INFO     | . initial setup = 2 s
[2025-07-28 00:51:46] 2025-07-28 04:51:14,309 | INFO     | . payload setup = 9 s
[2025-07-28 00:51:46] 2025-07-28 04:51:14,310 | INFO     | . stage-in = 0 s
[2025-07-28 00:51:46] 2025-07-28 04:51:14,310 | INFO     | . payload execution = 4841 s
[2025-07-28 00:51:46] 2025-07-28 04:51:14,310 | INFO     | . stage-out = 0 s
[2025-07-28 00:51:46] 2025-07-28 04:51:14,310 | INFO     | . log creation = 0 s
[2025-07-28 00:51:46] 2025-07-28 04:51:14,310 | INFO     | ..............................
[2025-07-28 00:51:46] 2025-07-28 04:51:14,394 | INFO     | 
[2025-07-28 00:51:46] 2025-07-28 04:51:14,394 | INFO     | job summary report
[2025-07-28 00:51:46] 2025-07-28 04:51:14,401 | INFO     | --------------------------------------------------
[2025-07-28 00:51:46] 2025-07-28 04:51:14,401 | INFO     | PanDA job id: 6748387874
[2025-07-28 00:51:46] 2025-07-28 04:51:14,401 | INFO     | task id: 45743349
[2025-07-28 00:51:46] 2025-07-28 04:51:14,401 | INFO     | errors: (none)
[2025-07-28 00:51:46] 2025-07-28 04:51:14,401 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:51:46] 2025-07-28 04:51:14,402 | INFO     | pilot state: finished 
[2025-07-28 00:51:46] 2025-07-28 04:51:14,402 | INFO     | transexitcode: 0
[2025-07-28 00:51:46] 2025-07-28 04:51:14,402 | INFO     | exeerrorcode: 0
[2025-07-28 00:51:46] 2025-07-28 04:51:14,402 | INFO     | exeerrordiag: 
[2025-07-28 00:51:46] 2025-07-28 04:51:14,402 | INFO     | exitcode: 0
[2025-07-28 00:51:46] 2025-07-28 04:51:14,402 | INFO     | exitmsg: OK
[2025-07-28 00:51:46] 2025-07-28 04:51:14,402 | INFO     | cpuconsumptiontime: 53276 s
[2025-07-28 00:51:46] 2025-07-28 04:51:14,403 | INFO     | nevents: 400
[2025-07-28 00:51:46] 2025-07-28 04:51:14,403 | INFO     | neventsw: 0
[2025-07-28 00:51:46] 2025-07-28 04:51:14,403 | INFO     | pid: 7494
[2025-07-28 00:51:46] 2025-07-28 04:51:14,403 | INFO     | pgrp: 7494
[2025-07-28 00:51:46] 2025-07-28 04:51:14,403 | INFO     | corecount: 12
[2025-07-28 00:51:46] 2025-07-28 04:51:14,403 | INFO     | event service: False
[2025-07-28 00:51:46] 2025-07-28 04:51:14,403 | INFO     | sizes: {0: 2397313, 1: 2397512, 6: 2397774, 12: 2397802, 4854: 2424020, 4855: 2424019, 4857: 2433257, 4865: 2433395}
[2025-07-28 00:51:46] 2025-07-28 04:51:14,404 | INFO     | --------------------------------------------------
[2025-07-28 00:51:46] 2025-07-28 04:51:14,404 | INFO     | 
[2025-07-28 00:51:46] 2025-07-28 04:51:14,404 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 00:51:46] 2025-07-28 04:51:14,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,431 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,431 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,431 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,434 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:51:46] 2025-07-28 04:51:14,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,434 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:51:46] 2025-07-28 04:51:14,434 | INFO     | job 6748387874 has completed (purged errors)
[2025-07-28 00:51:46] 2025-07-28 04:51:14,434 | INFO     | overall cleanup function is called
[2025-07-28 00:51:46] 2025-07-28 04:51:15,437 | INFO     | --- collectZombieJob: --- 10, [7494]
[2025-07-28 00:51:46] 2025-07-28 04:51:15,437 | INFO     | zombie collector waiting for pid 7494
[2025-07-28 00:51:46] 2025-07-28 04:51:15,438 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:51:46] 2025-07-28 04:51:15,438 | INFO     | collected zombie processes
[2025-07-28 00:51:46] 2025-07-28 04:51:15,438 | INFO     | will attempt to kill all subprocesses of pid=7494
[2025-07-28 00:51:46] 2025-07-28 04:51:15,530 | INFO     | process IDs to be killed: [7494] (in reverse order)
[2025-07-28 00:51:46] 2025-07-28 04:51:15,580 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:51:46] 2025-07-28 04:51:15,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:51:46] 2025-07-28 04:51:15,584 | INFO     | did not find any defunct processes belonging to 7494
[2025-07-28 00:51:46] 2025-07-28 04:51:15,586 | INFO     | did not find any defunct processes belonging to 7494
[2025-07-28 00:51:46] 2025-07-28 04:51:15,586 | INFO     | ready for new job
[2025-07-28 00:51:46] 2025-07-28 04:51:15,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:51:46] 2025-07-28 04:51:15,588 | INFO     | ***************************************
[2025-07-28 00:51:46] 2025-07-28 04:51:15,588 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:51:46] 2025-07-28 04:51:15,588 | INFO     | ***************************************
[2025-07-28 00:51:46] 2025-07-28 04:51:15,588 | INFO     | 
[2025-07-28 00:51:46] 2025-07-28 04:51:15,588 | INFO     | architecture information:
[2025-07-28 00:51:46] 2025-07-28 04:51:15,589 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:51:46] 2025-07-28 04:51:15,605 | INFO     | cat /etc/os-release:
[2025-07-28 00:51:46] NAME="CentOS Linux"
[2025-07-28 00:51:46] VERSION="7 (Core)"
[2025-07-28 00:51:46] ID="centos"
[2025-07-28 00:51:46] ID_LIKE="rhel fedora"
[2025-07-28 00:51:46] VERSION_ID="7"
[2025-07-28 00:51:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:51:46] ANSI_COLOR="0;31"
[2025-07-28 00:51:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:51:46] HOME_URL="https://www.centos.org/"
[2025-07-28 00:51:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:51:46] 
[2025-07-28 00:51:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:51:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:51:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:51:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:51:46] 
[2025-07-28 00:51:46] 2025-07-28 04:51:15,606 | INFO     | ***************************************
[2025-07-28 00:51:46] 2025-07-28 04:51:16,109 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 00:51:46] 2025-07-28 04:51:16,126 | INFO     | sufficient remaining disk space (29519511552 B)
[2025-07-28 00:51:46] 2025-07-28 04:51:16,127 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:51:46] 2025-07-28 04:51:16,127 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:51:46] 2025-07-28 04:51:16,127 | INFO     | update_server=False
[2025-07-28 00:51:46] 2025-07-28 04:51:16,127 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:51:46] 2025-07-28 04:51:16,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:51:46] 2025-07-28 04:51:16,128 | INFO     | aborting loop
[2025-07-28 00:51:46] 2025-07-28 04:51:16,128 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:51:46] 2025-07-28 04:51:16,679 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:51:46] 2025-07-28 04:51:16,996 | INFO     | all payload control threads have been joined
[2025-07-28 00:51:46] 2025-07-28 04:51:17,119 | INFO     | all data control threads have been joined
[2025-07-28 00:51:46] 2025-07-28 04:51:17,130 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:17,133 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:17,134 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:17,207 | INFO     | all job control threads have been joined
[2025-07-28 00:51:46] 2025-07-28 04:51:17,239 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:17,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:51:46] 2025-07-28 04:51:17,440 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:17,630 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:17,904 | INFO     | [job] validate thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:18,001 | INFO     | [payload] control thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:18,042 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:18,124 | INFO     | [data] control thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:18,147 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:18,213 | INFO     | [job] control thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:18,383 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:18,405 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:18,685 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:21,373 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:51:46] 2025-07-28 04:51:23,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339092002624)>', '<ExcThread(monitor, started 140337838282496)>']
[2025-07-28 00:51:46] 2025-07-28 04:51:28,192 | INFO     | all workflow threads have been joined
[2025-07-28 00:51:46] 2025-07-28 04:51:28,192 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:51:46] 2025-07-28 04:51:28,192 | INFO     | traces error code: 0
[2025-07-28 00:51:46] 2025-07-28 04:51:28,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:51:46] 2025-07-28 04:51:46,209 | INFO     | PID=32317 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 00:51:46] 2025-07-28 04:51:46,209 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:51:46] 2025-07-28 04:51:46,210 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:51:46] 2025-07-28 04:51:46,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:51:46] 2025-07-28 04:51:46,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:51:46] 2025-07-28 04:51:46,210 | INFO     | [monitor] control thread has ended
[2025-07-28 00:51:46] 2025-07-28 04:51:46,294 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:51:46] 2025-07-28 04:51:46,298 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:51:46] 2025-07-28 04:51:46,301 [wrapper] pilotpid: 32317
[2025-07-28 00:51:46] 2025-07-28 04:51:46,305 [wrapper] Pilot exit status: 0
[2025-07-28 00:51:46] 2025-07-28 04:51:46,321 [wrapper] pandaids: 6748387874
[2025-07-28 00:51:46] 2025-07-28 04:51:46,364 [wrapper] cleanup supervisor_pilot 31636 32318
[2025-07-28 00:51:46] 2025-07-28 04:51:46,368 [wrapper] Test setup, not cleaning
[2025-07-28 00:51:46] 2025-07-28 04:51:46,372 [wrapper] apfmon messages muted
[2025-07-28 00:51:46] 2025-07-28 04:51:46,376 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:51:46] 2025-07-28 04:51:46,380 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:51:46]  *** Error codes and diagnostics ***
[2025-07-28 00:51:46]     "exeErrorCode": 0,
[2025-07-28 00:51:46]     "exeErrorDiag": "",
[2025-07-28 00:51:46]     "pilotErrorCode": 0,
[2025-07-28 00:51:46]     "pilotErrorDiag": "",
[2025-07-28 00:51:46]  *** Listing of results directory ***
[2025-07-28 00:51:46] total 349732
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 21:42 pilot3.tar.gz
[2025-07-28 00:51:46] -rwx------ 1 boincer umatlas     36292 Jul 27 21:44 runpilot2-wrapper.sh
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 21:44 queuedata.json
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas       100 Jul 27 23:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:51:46] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 23:29 run_atlas
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas       105 Jul 27 23:29 job.xml
[2025-07-28 00:51:46] -rw-r--r-- 2 boincer umatlas 143563933 Jul 27 23:29 EVNT.45743347._002986.pool.root.1
[2025-07-28 00:51:46] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 23:29 start_atlas.sh
[2025-07-28 00:51:46] drwxrwx--x 2 boincer umatlas      4096 Jul 27 23:29 shared
[2025-07-28 00:51:46] -rw-r--r-- 2 boincer umatlas    542896 Jul 27 23:29 input.tar.gz
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas         0 Jul 27 23:29 boinc_lockfile
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas      2572 Jul 27 23:29 pandaJob.out
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas    980117 Jul 27 23:29 agis_schedconf.cvmfs.json
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas   1593052 Jul 27 23:29 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:51:46] drwx------ 4 boincer umatlas      4096 Jul 27 23:29 pilot3
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas      5868 Jul 28 00:46 init_data.xml
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas 209051303 Jul 28 00:50 HITS.45743349._055855.pool.root.1
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas        95 Jul 28 00:50 pilot_heartbeat.json
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas      1047 Jul 28 00:51 memory_monitor_summary.json
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas       529 Jul 28 00:51 boinc_task_state.xml
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas    355362 Jul 28 00:51 log.45743349._055855.job.log.tgz.1
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas      7858 Jul 28 00:51 heartbeat.json
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas      8192 Jul 28 00:51 boinc_mmap_file
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas        27 Jul 28 00:51 wrapper_checkpoint.txt
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas       745 Jul 28 00:51 pilotlog.txt
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas    464070 Jul 28 00:51 log.45743349._055855.job.log.1
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas       357 Jul 28 00:51 output.list
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas       620 Jul 28 00:51 runtime_log
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas    839680 Jul 28 00:51 result.tar.gz
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas      8662 Jul 28 00:51 runtime_log.err
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas       659 Jul 28 00:51 dE0KDmv5R07n9Rq4apOajLDm4fhM0noT9bVof3QYDmCA3KDmAP7jOm.diag
[2025-07-28 00:51:46] -rw-r--r-- 1 boincer umatlas     21517 Jul 28 00:51 stderr.txt
[2025-07-28 00:51:46] HITS file was successfully produced:
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas 209051303 Jul 28 00:50 shared/HITS.pool.root.1
[2025-07-28 00:51:46]  *** Contents of shared directory: ***
[2025-07-28 00:51:46] total 345724
[2025-07-28 00:51:46] -rw-r--r-- 2 boincer umatlas 143563933 Jul 27 23:29 ATLAS.root_0
[2025-07-28 00:51:46] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 23:29 start_atlas.sh
[2025-07-28 00:51:46] -rw-r--r-- 2 boincer umatlas    542896 Jul 27 23:29 input.tar.gz
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas 209051303 Jul 28 00:50 HITS.pool.root.1
[2025-07-28 00:51:46] -rw------- 1 boincer umatlas    839680 Jul 28 00:51 result.tar.gz
00:51:48 (28719): run_atlas exited; CPU time 53252.232782
00:51:48 (28719): called boinc_finish(0)

</stderr_txt>
]]>

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