Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:39:14 (621392): wrapper (7.7.26015): starting
23:39:14 (621392): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 23:39:14] Arguments: --nthreads 8
[2025-07-27 23:39:14] Threads: 8
[2025-07-27 23:39:14] Checking for CVMFS
[2025-07-27 23:39:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:39:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:39:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:39:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:39:15] 2.13.0.0 107782 28143 146516 148834 0 320 22374561 32503809 22011 16776704 0 270134233 99.579 351584388 28835 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 23:39:15] CVMFS is ok
[2025-07-27 23:39:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:39:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:39:15] Further information can be found at the LHC@home message board.
[2025-07-27 23:39:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:39:15] Checking for apptainer binary...
[2025-07-27 23:39:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:39:15] Running /usr/bin/apptainer --version
[2025-07-27 23:39:15] apptainer version 1.4.1-1.el9
[2025-07-27 23:39:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:39:15] c8-7-2.aglt2.org
[2025-07-27 23:39:15] apptainer works
[2025-07-27 23:39:15] Set ATHENA_PROC_NUMBER=8
[2025-07-27 23:39:15] Set ATHENA_CORE_NUMBER=8
[2025-07-27 23:39:15] Starting ATLAS job with PandaID=6748075877
[2025-07-27 23:39:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:04:04]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:04:04]  scope=mc23_13p6TeV
[2025-07-28 01:04:04]  status=None
[2025-07-28 01:04:04]  status_code=0
[2025-07-28 01:04:04]  storage_token=
[2025-07-28 01:04:04]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6748075877/log.45758877._000133.job.log.tgz.1
[2025-07-28 01:04:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/b6/log.45758877._000133.job.log.tgz.1
[2025-07-28 01:04:04]  workdir=None
[2025-07-28 01:04:04] ]
[2025-07-28 01:04:04] 2025-07-28 05:03:20,399 | INFO     | transferring file log.45758877._000133.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6748075877/log.45758877._000133.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 01:04:04] 2025-07-28 05:03:20,399 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6748075877/log.45758877._000133.job.log.tgz.1 /tmp/boinchome/slots/2/log.45758877._000133.job
[2025-07-28 01:04:04] 2025-07-28 05:03:20,421 | INFO     | adding to output.list: log.45758877._000133.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/b6/log.45758877._000133.job.log.tg
[2025-07-28 01:04:04] 2025-07-28 05:03:20,423 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 01:04:04] 2025-07-28 05:03:20,423 | INFO     | summary of transferred files:
[2025-07-28 01:04:04] 2025-07-28 05:03:20,423 | INFO     |  -- lfn=log.45758877._000133.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 01:04:04] 2025-07-28 05:03:20,423 | INFO     | stage-out finished correctly
[2025-07-28 01:04:04] 2025-07-28 05:03:22,394 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 01:04:04] 2025-07-28 05:03:22,748 | INFO     | monitor loop #339: job 0:6748075877 is in state 'finished'
[2025-07-28 01:04:04] 2025-07-28 05:03:22,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:04:04] 2025-07-28 05:03:24,686 | INFO     | job 6748075877 has state=finished
[2025-07-28 01:04:04] 2025-07-28 05:03:24,686 | INFO     | preparing for final server update for job 6748075877 in state='finished'
[2025-07-28 01:04:04] 2025-07-28 05:03:24,744 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-28 01:04:04] 2025-07-28 05:03:24,744 | INFO     | this job has now completed (state=finished)
[2025-07-28 01:04:04] 2025-07-28 05:03:24,745 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 01:04:04] 2025-07-28 05:03:24,745 | INFO     | log transfer has been attempted: DONE
[2025-07-28 01:04:04] 2025-07-28 05:03:24,745 | INFO     | job 6748075877 has finished - writing final server update
[2025-07-28 01:04:04] 2025-07-28 05:03:24,745 | INFO     | total number of processed events: 400 (read)
[2025-07-28 01:04:04] 2025-07-28 05:03:24,746 | INFO     | executing command: lscpu
[2025-07-28 01:04:04] 2025-07-28 05:03:24,815 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 01:04:04] 2025-07-28 05:03:25,253 | INFO     | monitor loop #340: job 0:6748075877 is in state 'finished'
[2025-07-28 01:04:04] 2025-07-28 05:03:25,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:04:04] 2025-07-28 05:03:27,480 | INFO     | PID=626947 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:04:04] 2025-07-28 05:03:27,480 | INFO     | .. there are 22 such processes running
[2025-07-28 01:04:04] 2025-07-28 05:03:27,761 | INFO     | monitor loop #341: job 0:6748075877 is in state 'finished'
[2025-07-28 01:04:04] 2025-07-28 05:03:27,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:04:04] 2025-07-28 05:03:30,266 | INFO     | monitor loop #342: job 0:6748075877 is in state 'finished'
[2025-07-28 01:04:04] 2025-07-28 05:03:30,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:04:04] 2025-07-28 05:03:30,560 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 01:04:04] 2025-07-28 05:03:30,565 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3626.703187499998
[2025-07-28 01:04:04] 2025-07-28 05:03:30,578 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6748075877/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:04:04] 2025-07-28 05:03:30,579 | INFO     | extracted standard info from prmon json
[2025-07-28 01:04:04] 2025-07-28 05:03:30,579 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:04:04] 2025-07-28 05:03:30,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:04:04] 2025-07-28 05:03:30,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:04:04] 2025-07-28 05:03:30,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:04:04] 2025-07-28 05:03:30,581 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:04:04] 2025-07-28 05:03:30,581 | INFO     | sum of square deviations: 130793150.0
[2025-07-28 01:04:04] 2025-07-28 05:03:30,581 | INFO     | sum of deviations: -3356796694.000001
[2025-07-28 01:04:04] 2025-07-28 05:03:30,581 | INFO     | mean x: 1753676563.0
[2025-07-28 01:04:04] 2025-07-28 05:03:30,581 | INFO     | mean y: 2250493.2133333334
[2025-07-28 01:04:04] 2025-07-28 05:03:30,581 | INFO     | -- intersect: 45010232096.4065
[2025-07-28 01:04:04] 2025-07-28 05:03:30,581 | INFO     | intersect: 45010232096.4065
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | chi2: 0.032979670333280996
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | -- intersect: 45010232096.4065
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | current memory leak: -25.66 B/s (using 75 data points, chi2=0.03)
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | could have reported an average CPU frequency of 3678 MHz (6 samples)
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | ..............................
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | . Timing measurements:
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | . get job = 0 s
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | . initial setup = 3 s
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | . payload setup = 8 s
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | . stage-in = 0 s
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | . payload execution = 5001 s
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | . stage-out = 0 s
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | . log creation = 0 s
[2025-07-28 01:04:04] 2025-07-28 05:03:30,582 | INFO     | ..............................
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | 
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | job summary report
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | --------------------------------------------------
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | PanDA job id: 6748075877
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | task id: 45758877
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | errors: (none)
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | pilot state: finished 
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | transexitcode: 0
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | exeerrorcode: 0
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | exeerrordiag: 
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | exitcode: 0
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | exitmsg: OK
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | cpuconsumptiontime: 31998 s
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | nevents: 400
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | neventsw: 0
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | pid: 635598
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | pgrp: 635598
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | corecount: 8
[2025-07-28 01:04:04] 2025-07-28 05:03:30,638 | INFO     | event service: False
[2025-07-28 01:04:04] 2025-07-28 05:03:30,639 | INFO     | sizes: {0: 2397203, 1: 2397402, 7: 2397664, 11: 2397692, 5013: 2423964, 5015: 2432962, 5017: 2433146, 5025: 2433340}
[2025-07-28 01:04:04] 2025-07-28 05:03:30,639 | INFO     | --------------------------------------------------
[2025-07-28 01:04:04] 2025-07-28 05:03:30,639 | INFO     | 
[2025-07-28 01:04:04] 2025-07-28 05:03:30,639 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-28 01:04:04] 2025-07-28 05:03:30,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | job 6748075877 has completed (purged errors)
[2025-07-28 01:04:04] 2025-07-28 05:03:30,664 | INFO     | overall cleanup function is called
[2025-07-28 01:04:04] 2025-07-28 05:03:31,671 | INFO     | --- collectZombieJob: --- 10, [635598]
[2025-07-28 01:04:04] 2025-07-28 05:03:31,671 | INFO     | zombie collector waiting for pid 635598
[2025-07-28 01:04:04] 2025-07-28 05:03:31,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:04:04] 2025-07-28 05:03:31,671 | INFO     | collected zombie processes
[2025-07-28 01:04:04] 2025-07-28 05:03:31,671 | INFO     | will attempt to kill all subprocesses of pid=635598
[2025-07-28 01:04:04] 2025-07-28 05:03:32,095 | INFO     | process IDs to be killed: [635598] (in reverse order)
[2025-07-28 01:04:04] 2025-07-28 05:03:32,252 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:04:04] 2025-07-28 05:03:32,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:04:04] 2025-07-28 05:03:32,277 | INFO     | did not find any defunct processes belonging to 635598
[2025-07-28 01:04:04] 2025-07-28 05:03:32,300 | INFO     | did not find any defunct processes belonging to 635598
[2025-07-28 01:04:04] 2025-07-28 05:03:32,301 | INFO     | ready for new job
[2025-07-28 01:04:04] 2025-07-28 05:03:32,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:04:04] 2025-07-28 05:03:32,302 | INFO     | ***************************************
[2025-07-28 01:04:04] 2025-07-28 05:03:32,302 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:04:04] 2025-07-28 05:03:32,302 | INFO     | ***************************************
[2025-07-28 01:04:04] 2025-07-28 05:03:32,302 | INFO     | 
[2025-07-28 01:04:04] 2025-07-28 05:03:32,320 | INFO     | architecture information:
[2025-07-28 01:04:04] 2025-07-28 05:03:32,320 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:04:04] 2025-07-28 05:03:32,337 | INFO     | cat /etc/os-release:
[2025-07-28 01:04:04] NAME="CentOS Linux"
[2025-07-28 01:04:04] VERSION="7 (Core)"
[2025-07-28 01:04:04] ID="centos"
[2025-07-28 01:04:04] ID_LIKE="rhel fedora"
[2025-07-28 01:04:04] VERSION_ID="7"
[2025-07-28 01:04:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:04:04] ANSI_COLOR="0;31"
[2025-07-28 01:04:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:04:04] HOME_URL="https://www.centos.org/"
[2025-07-28 01:04:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:04:04] 
[2025-07-28 01:04:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:04:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:04:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:04:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:04:04] 
[2025-07-28 01:04:04] 2025-07-28 05:03:32,338 | INFO     | ***************************************
[2025-07-28 01:04:04] 2025-07-28 05:03:32,839 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-28 01:04:04] 2025-07-28 05:03:32,860 | INFO     | sufficient remaining disk space (95155126272 B)
[2025-07-28 01:04:04] 2025-07-28 05:03:32,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:04:04] 2025-07-28 05:03:32,860 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:04:04] 2025-07-28 05:03:32,860 | INFO     | update_server=False
[2025-07-28 01:04:04] 2025-07-28 05:03:32,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:04:04] 2025-07-28 05:03:32,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:04:04] 2025-07-28 05:03:33,059 | INFO     | all data control threads have been joined
[2025-07-28 01:04:04] 2025-07-28 05:03:33,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:04:04] 2025-07-28 05:03:33,760 | INFO     | all job control threads have been joined
[2025-07-28 01:04:04] 2025-07-28 05:03:33,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:04:04] 2025-07-28 05:03:33,776 | INFO     | aborting loop
[2025-07-28 01:04:04] 2025-07-28 05:03:33,865 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:33,952 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:34,066 | INFO     | [data] control thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:34,095 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:34,259 | INFO     | all payload control threads have been joined
[2025-07-28 01:04:04] 2025-07-28 05:03:34,445 | INFO     | [job] validate thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:34,711 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:34,765 | INFO     | [job] control thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:34,781 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:35,060 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:35,079 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:35,253 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:35,264 | INFO     | [payload] control thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:35,502 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:35,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:04:04] 2025-07-28 05:03:36,653 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:36,978 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:43,415 | INFO     | job.realtimelogging is not enabled
[2025-07-28 01:04:04] 2025-07-28 05:03:44,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:04:04] 2025-07-28 05:03:46,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745044637504)>', '<ExcThread(monitor, started 139744394598144)>']
[2025-07-28 01:04:04] 2025-07-28 05:03:51,147 | INFO     | all workflow threads have been joined
[2025-07-28 01:04:04] 2025-07-28 05:03:51,148 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:04:04] 2025-07-28 05:03:51,148 | INFO     | traces error code: 0
[2025-07-28 01:04:04] 2025-07-28 05:03:51,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:04:04] 2025-07-28 05:04:04,055 | INFO     | PID=626947 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 01:04:04] 2025-07-28 05:04:04,056 | INFO     | .. there are 22 such processes running
[2025-07-28 01:04:04] 2025-07-28 05:04:04,056 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:04:04] 2025-07-28 05:04:04,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:04:04] 2025-07-28 05:04:04,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:04:04] 2025-07-28 05:04:04,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:04:04] 2025-07-28 05:04:04,056 | INFO     | [monitor] control thread has ended
[2025-07-28 01:04:04] 2025-07-28 05:04:04,222 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:04:04] 2025-07-28 05:04:04,226 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:04:04] 2025-07-28 05:04:04,230 [wrapper] pilotpid: 626947
[2025-07-28 01:04:04] 2025-07-28 05:04:04,235 [wrapper] Pilot exit status: 0
[2025-07-28 01:04:04] 2025-07-28 05:04:04,263 [wrapper] pandaids: 6748075877
[2025-07-28 01:04:04] 2025-07-28 05:04:04,395 [wrapper] cleanup supervisor_pilot 1369969 626948
[2025-07-28 01:04:04] 2025-07-28 05:04:04,399 [wrapper] Test setup, not cleaning
[2025-07-28 01:04:04] 2025-07-28 05:04:04,402 [wrapper] apfmon messages muted
[2025-07-28 01:04:04] 2025-07-28 05:04:04,404 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:04:04] 2025-07-28 05:04:04,409 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:04:04]  *** Error codes and diagnostics ***
[2025-07-28 01:04:04]     "exeErrorCode": 0,
[2025-07-28 01:04:04]     "exeErrorDiag": "",
[2025-07-28 01:04:04]     "pilotErrorCode": 0,
[2025-07-28 01:04:04]     "pilotErrorDiag": "",
[2025-07-28 01:04:04]  *** Listing of results directory ***
[2025-07-28 01:04:04] total 413332
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 16:27 pilot3.tar.gz
[2025-07-28 01:04:04] -rwx------. 1 boincer umatlas     36292 Jul 27 16:41 runpilot2-wrapper.sh
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 16:41 queuedata.json
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas       100 Jul 27 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:04:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 23:39 run_atlas
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas       105 Jul 27 23:39 job.xml
[2025-07-28 01:04:04] -rw-r--r--. 2 boincer umatlas 242467017 Jul 27 23:39 EVNT.45758875._000004.pool.root.1
[2025-07-28 01:04:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:39 start_atlas.sh
[2025-07-28 01:04:04] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 23:39 shared
[2025-07-28 01:04:04] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 23:39 input.tar.gz
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas         0 Jul 27 23:39 boinc_lockfile
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas      2567 Jul 27 23:39 pandaJob.out
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas    980117 Jul 27 23:39 agis_schedconf.cvmfs.json
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas   1593052 Jul 27 23:39 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:04:04] drwx------. 4 boincer umatlas      4096 Jul 27 23:39 pilot3
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas      7159 Jul 28 00:54 init_data.xml
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas 175326007 Jul 28 01:02 HITS.45758877._000133.pool.root.1
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas       529 Jul 28 01:03 boinc_task_state.xml
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas        95 Jul 28 01:03 pilot_heartbeat.json
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas      1042 Jul 28 01:03 memory_monitor_summary.json
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas    315699 Jul 28 01:03 log.45758877._000133.job.log.tgz.1
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas      7781 Jul 28 01:03 heartbeat.json
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 01:04 boinc_mmap_file
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas        27 Jul 28 01:04 wrapper_checkpoint.txt
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas       822 Jul 28 01:04 pilotlog.txt
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas    471374 Jul 28 01:04 log.45758877._000133.job.log.1
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas       357 Jul 28 01:04 output.list
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas       620 Jul 28 01:04 runtime_log
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas    808960 Jul 28 01:04 result.tar.gz
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas      8650 Jul 28 01:04 runtime_log.err
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas       654 Jul 28 01:04 ejTLDm3MN07n9Rq4apOajLDm4fhM0noT9bVof3QYDmv62KDmN8ODdm.diag
[2025-07-28 01:04:04] -rw-r--r--. 1 boincer umatlas     22034 Jul 28 01:04 stderr.txt
[2025-07-28 01:04:04] HITS file was successfully produced:
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas 175326007 Jul 28 01:02 shared/HITS.pool.root.1
[2025-07-28 01:04:04]  *** Contents of shared directory: ***
[2025-07-28 01:04:04] total 409352
[2025-07-28 01:04:04] -rw-r--r--. 2 boincer umatlas 242467017 Jul 27 23:39 ATLAS.root_0
[2025-07-28 01:04:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 23:39 start_atlas.sh
[2025-07-28 01:04:04] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 23:39 input.tar.gz
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas 175326007 Jul 28 01:02 HITS.pool.root.1
[2025-07-28 01:04:04] -rw-------. 1 boincer umatlas    808960 Jul 28 01:04 result.tar.gz
01:04:06 (621392): run_atlas exited; CPU time 32130.437948
01:04:06 (621392): called boinc_finish(0)

</stderr_txt>
]]>

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