Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:50:48 (2168939): wrapper (7.7.26015): starting
00:50:48 (2168939): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 00:50:48] Arguments: --nthreads 12
[2025-07-28 00:50:48] Threads: 12
[2025-07-28 00:50:48] Checking for CVMFS
[2025-07-28 00:50:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:50:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:50:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:50:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:50:49] 2.12.6.0 1263230 19347 345520 148836 1 382 21154299 32935936 10686 16776704 0 37672465 99.595 60943607 28942 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-28 00:50:49] CVMFS is ok
[2025-07-28 00:50:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 00:50:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 00:50:49] Further information can be found at the LHC@home message board.
[2025-07-28 00:50:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:50:49] Checking for apptainer binary...
[2025-07-28 00:50:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 00:50:49] Running /usr/bin/apptainer --version
[2025-07-28 00:50:49] apptainer version 1.4.1-1.el9
[2025-07-28 00:50:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:50:49] c6-5-7-2.aglt2.org
[2025-07-28 00:50:49] apptainer works
[2025-07-28 00:50:49] Set ATHENA_PROC_NUMBER=12
[2025-07-28 00:50:49] Set ATHENA_CORE_NUMBER=12
[2025-07-28 00:50:49] Starting ATLAS job with PandaID=6748382704
[2025-07-28 00:50:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 02:14:04]  *** The last 200 lines of the pilot log: ***
[2025-07-28 02:14:04]  protocol_id=None
[2025-07-28 02:14:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 02:14:04]  replicas=None
[2025-07-28 02:14:04]  scope=mc23_13p6TeV
[2025-07-28 02:14:04]  status=None
[2025-07-28 02:14:04]  status_code=0
[2025-07-28 02:14:04]  storage_token=
[2025-07-28 02:14:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6748382704/log.45758400._000129.job.log.tgz.1
[2025-07-28 02:14:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/8a/log.45758400._000129.job.log.tgz.1
[2025-07-28 02:14:04]  workdir=None
[2025-07-28 02:14:04] ]
[2025-07-28 02:14:04] 2025-07-28 06:13:22,763 | INFO     | transferring file log.45758400._000129.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6748382704/log.45758400._000129.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-28 02:14:04] 2025-07-28 06:13:22,763 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6748382704/log.45758400._000129.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758400._000129.job
[2025-07-28 02:14:04] 2025-07-28 06:13:22,787 | INFO     | adding to output.list: log.45758400._000129.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/8a/log.45758400._000129.job.log.tg
[2025-07-28 02:14:04] 2025-07-28 06:13:22,788 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 02:14:04] 2025-07-28 06:13:22,788 | INFO     | summary of transferred files:
[2025-07-28 02:14:04] 2025-07-28 06:13:22,789 | INFO     |  -- lfn=log.45758400._000129.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 02:14:04] 2025-07-28 06:13:22,789 | INFO     | stage-out finished correctly
[2025-07-28 02:14:04] 2025-07-28 06:13:23,392 | INFO     | PID=2174118 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:14:04] 2025-07-28 06:13:23,392 | INFO     | .. there are 14 such processes running
[2025-07-28 02:14:04] 2025-07-28 06:13:25,160 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 02:14:04] 2025-07-28 06:13:25,237 | INFO     | job 6748382704 has state=finished
[2025-07-28 02:14:04] 2025-07-28 06:13:25,238 | INFO     | preparing for final server update for job 6748382704 in state='finished'
[2025-07-28 02:14:04] 2025-07-28 06:13:25,238 | INFO     | this job has now completed (state=finished)
[2025-07-28 02:14:04] 2025-07-28 06:13:25,238 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 02:14:04] 2025-07-28 06:13:25,238 | INFO     | log transfer has been attempted: DONE
[2025-07-28 02:14:04] 2025-07-28 06:13:25,238 | INFO     | job 6748382704 has finished - writing final server update
[2025-07-28 02:14:04] 2025-07-28 06:13:25,239 | INFO     | total number of processed events: 400 (read)
[2025-07-28 02:14:04] 2025-07-28 06:13:25,239 | INFO     | executing command: lscpu
[2025-07-28 02:14:04] 2025-07-28 06:13:25,301 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 02:14:04] 2025-07-28 06:13:26,705 | WARNING  | process 2185183 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 02:14:04] 2025-07-28 06:13:26,706 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748382704/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:14:04] 2025-07-28 06:13:27,033 | INFO     | number of running child processes to parent process 2185183: 1
[2025-07-28 02:14:04] 2025-07-28 06:13:27,033 | INFO     | maximum number of monitored processes: 6
[2025-07-28 02:14:04] 2025-07-28 06:13:29,536 | INFO     | monitor loop #362: job 0:6748382704 is in state 'finished'
[2025-07-28 02:14:04] 2025-07-28 06:13:29,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 02:14:04] 2025-07-28 06:13:30,612 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 02:14:04] 2025-07-28 06:13:30,631 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2798.2634107142862
[2025-07-28 02:14:04] 2025-07-28 06:13:30,639 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6748382704/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:14:04] 2025-07-28 06:13:30,640 | INFO     | extracted standard info from prmon json
[2025-07-28 02:14:04] 2025-07-28 06:13:30,640 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 02:14:04] 2025-07-28 06:13:30,640 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 02:14:04] 2025-07-28 06:13:30,640 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 02:14:04] 2025-07-28 06:13:30,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 02:14:04] 2025-07-28 06:13:30,642 | INFO     | fitting pss+swap vs Time
[2025-07-28 02:14:04] 2025-07-28 06:13:30,642 | INFO     | sum of square deviations: 125630262.5
[2025-07-28 02:14:04] 2025-07-28 06:13:30,643 | INFO     | sum of deviations: -12548184004.500006
[2025-07-28 02:14:04] 2025-07-28 06:13:30,643 | INFO     | mean x: 1753680824.5
[2025-07-28 02:14:04] 2025-07-28 06:13:30,643 | INFO     | mean y: 2486503.635135135
[2025-07-28 02:14:04] 2025-07-28 06:13:30,643 | INFO     | -- intersect: 175163385104.7129
[2025-07-28 02:14:04] 2025-07-28 06:13:30,643 | INFO     | intersect: 175163385104.7129
[2025-07-28 02:14:04] 2025-07-28 06:13:30,643 | INFO     | chi2: 0.16714356349398976
[2025-07-28 02:14:04] 2025-07-28 06:13:30,643 | INFO     | -- intersect: 175163385104.7129
[2025-07-28 02:14:04] 2025-07-28 06:13:30,643 | INFO     | current memory leak: -99.88 B/s (using 74 data points, chi2=0.17)
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | could have reported an average CPU frequency of 2744 MHz (6 samples)
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | ..............................
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | . Timing measurements:
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | . get job = 0 s
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | . initial setup = 2 s
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | . payload setup = 8 s
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | . stage-in = 0 s
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | . payload execution = 4911 s
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | . stage-out = 0 s
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | . log creation = 0 s
[2025-07-28 02:14:04] 2025-07-28 06:13:30,644 | INFO     | ..............................
[2025-07-28 02:14:04] 2025-07-28 06:13:30,721 | INFO     | 
[2025-07-28 02:14:04] 2025-07-28 06:13:30,721 | INFO     | job summary report
[2025-07-28 02:14:04] 2025-07-28 06:13:30,721 | INFO     | --------------------------------------------------
[2025-07-28 02:14:04] 2025-07-28 06:13:30,721 | INFO     | PanDA job id: 6748382704
[2025-07-28 02:14:04] 2025-07-28 06:13:30,721 | INFO     | task id: 45758400
[2025-07-28 02:14:04] 2025-07-28 06:13:30,721 | INFO     | errors: (none)
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | pilot state: finished 
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | transexitcode: 0
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | exeerrorcode: 0
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | exeerrordiag: 
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | exitcode: 0
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | exitmsg: OK
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | cpuconsumptiontime: 53001 s
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | nevents: 400
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | neventsw: 0
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | pid: 2185183
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | pgrp: 2185183
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | corecount: 12
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | event service: False
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | sizes: {0: 2396581, 1: 2397437, 6: 2397699, 12: 2397727, 4923: 2423882, 4924: 2432880, 4926: 2433064, 4932: 2433258}
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | --------------------------------------------------
[2025-07-28 02:14:04] 2025-07-28 06:13:30,722 | INFO     | 
[2025-07-28 02:14:04] 2025-07-28 06:13:30,723 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-28 02:14:04] 2025-07-28 06:13:30,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,747 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 02:14:04] 2025-07-28 06:13:30,748 | INFO     | job 6748382704 has completed (purged errors)
[2025-07-28 02:14:04] 2025-07-28 06:13:30,749 | INFO     | overall cleanup function is called
[2025-07-28 02:14:04] 2025-07-28 06:13:31,757 | INFO     | --- collectZombieJob: --- 10, [2185183]
[2025-07-28 02:14:04] 2025-07-28 06:13:31,757 | INFO     | zombie collector waiting for pid 2185183
[2025-07-28 02:14:04] 2025-07-28 06:13:31,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 02:14:04] 2025-07-28 06:13:31,757 | INFO     | collected zombie processes
[2025-07-28 02:14:04] 2025-07-28 06:13:31,757 | INFO     | will attempt to kill all subprocesses of pid=2185183
[2025-07-28 02:14:04] 2025-07-28 06:13:32,004 | INFO     | process IDs to be killed: [2185183] (in reverse order)
[2025-07-28 02:14:04] 2025-07-28 06:13:32,096 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 02:14:04] 2025-07-28 06:13:32,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 02:14:04] 2025-07-28 06:13:32,111 | INFO     | did not find any defunct processes belonging to 2185183
[2025-07-28 02:14:04] 2025-07-28 06:13:32,124 | INFO     | did not find any defunct processes belonging to 2185183
[2025-07-28 02:14:04] 2025-07-28 06:13:32,125 | INFO     | ready for new job
[2025-07-28 02:14:04] 2025-07-28 06:13:32,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 02:14:04] 2025-07-28 06:13:32,128 | INFO     | ***************************************
[2025-07-28 02:14:04] 2025-07-28 06:13:32,128 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 02:14:04] 2025-07-28 06:13:32,128 | INFO     | ***************************************
[2025-07-28 02:14:04] 2025-07-28 06:13:32,128 | INFO     | 
[2025-07-28 02:14:04] 2025-07-28 06:13:32,144 | INFO     | architecture information:
[2025-07-28 02:14:04] 2025-07-28 06:13:32,145 | INFO     | executing command: cat /etc/os-release
[2025-07-28 02:14:04] 2025-07-28 06:13:32,164 | INFO     | cat /etc/os-release:
[2025-07-28 02:14:04] NAME="CentOS Linux"
[2025-07-28 02:14:04] VERSION="7 (Core)"
[2025-07-28 02:14:04] ID="centos"
[2025-07-28 02:14:04] ID_LIKE="rhel fedora"
[2025-07-28 02:14:04] VERSION_ID="7"
[2025-07-28 02:14:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 02:14:04] ANSI_COLOR="0;31"
[2025-07-28 02:14:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 02:14:04] HOME_URL="https://www.centos.org/"
[2025-07-28 02:14:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 02:14:04] 
[2025-07-28 02:14:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 02:14:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 02:14:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 02:14:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 02:14:04] 
[2025-07-28 02:14:04] 2025-07-28 06:13:32,164 | INFO     | ***************************************
[2025-07-28 02:14:04] 2025-07-28 06:13:32,667 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-28 02:14:04] 2025-07-28 06:13:32,686 | INFO     | sufficient remaining disk space (76539756544 B)
[2025-07-28 02:14:04] 2025-07-28 06:13:32,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 02:14:04] 2025-07-28 06:13:32,686 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 02:14:04] 2025-07-28 06:13:32,687 | INFO     | update_server=False
[2025-07-28 02:14:04] 2025-07-28 06:13:32,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 02:14:04] 2025-07-28 06:13:32,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:14:04] 2025-07-28 06:13:32,824 | INFO     | all data control threads have been joined
[2025-07-28 02:14:04] 2025-07-28 06:13:33,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:14:04] 2025-07-28 06:13:33,045 | INFO     | aborting loop
[2025-07-28 02:14:04] 2025-07-28 06:13:33,428 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 02:14:04] 2025-07-28 06:13:33,692 | INFO     | [job] retrieve thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:33,692 | INFO     | [job] queue monitor thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:33,722 | INFO     | all payload control threads have been joined
[2025-07-28 02:14:04] 2025-07-28 06:13:33,830 | INFO     | [data] control thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:34,051 | INFO     | [job] job monitor thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:34,128 | INFO     | all job control threads have been joined
[2025-07-28 02:14:04] 2025-07-28 06:13:34,131 | INFO     | [payload] failed_post thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:34,147 | INFO     | [payload] validate_post thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:34,187 | INFO     | [data] copytool_in thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:34,463 | INFO     | [job] validate thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:34,727 | INFO     | [payload] control thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:34,821 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:34,941 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:34,949 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:35,134 | INFO     | [job] control thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:35,433 | INFO     | [data] copytool_out thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:35,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 02:14:04] 2025-07-28 06:13:39,752 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:43,102 | INFO     | job.realtimelogging is not enabled
[2025-07-28 02:14:04] 2025-07-28 06:13:44,107 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 02:14:04] 2025-07-28 06:13:44,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140623248258880)>', '<ExcThread(monitor, started 140622295971584)>']
[2025-07-28 02:14:04] 2025-07-28 06:13:49,411 | INFO     | all workflow threads have been joined
[2025-07-28 02:14:04] 2025-07-28 06:13:49,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 02:14:04] 2025-07-28 06:13:49,412 | INFO     | traces error code: 0
[2025-07-28 02:14:04] 2025-07-28 06:13:49,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 02:14:04] 2025-07-28 06:14:03,845 | INFO     | PID=2174118 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:14:04] 2025-07-28 06:14:03,846 | INFO     | .. there are 14 such processes running
[2025-07-28 02:14:04] 2025-07-28 06:14:03,847 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 02:14:04] 2025-07-28 06:14:03,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 02:14:04] 2025-07-28 06:14:03,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 02:14:04] 2025-07-28 06:14:03,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 02:14:04] 2025-07-28 06:14:03,847 | INFO     | [monitor] control thread has ended
[2025-07-28 02:14:04] 2025-07-28 06:14:04,020 [wrapper] ==== pilot stdout END ====
[2025-07-28 02:14:04] 2025-07-28 06:14:04,024 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 02:14:04] 2025-07-28 06:14:04,027 [wrapper] pilotpid: 2174118
[2025-07-28 02:14:04] 2025-07-28 06:14:04,030 [wrapper] Pilot exit status: 0
[2025-07-28 02:14:04] 2025-07-28 06:14:04,046 [wrapper] pandaids: 6748382704
[2025-07-28 02:14:04] 2025-07-28 06:14:04,108 [wrapper] cleanup supervisor_pilot 2338556 2174119
[2025-07-28 02:14:04] 2025-07-28 06:14:04,112 [wrapper] Test setup, not cleaning
[2025-07-28 02:14:04] 2025-07-28 06:14:04,116 [wrapper] apfmon messages muted
[2025-07-28 02:14:04] 2025-07-28 06:14:04,120 [wrapper] ==== wrapper stdout END ====
[2025-07-28 02:14:04] 2025-07-28 06:14:04,123 [wrapper] ==== wrapper stderr END ====
[2025-07-28 02:14:04]  *** Error codes and diagnostics ***
[2025-07-28 02:14:04]     "exeErrorCode": 0,
[2025-07-28 02:14:04]     "exeErrorDiag": "",
[2025-07-28 02:14:04]     "pilotErrorCode": 0,
[2025-07-28 02:14:04]     "pilotErrorDiag": "",
[2025-07-28 02:14:04]  *** Listing of results directory ***
[2025-07-28 02:14:04] total 405020
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 20:35 pilot3.tar.gz
[2025-07-28 02:14:04] -rwx------. 1 boincer umatlas     36292 Jul 27 21:26 runpilot2-wrapper.sh
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 21:26 queuedata.json
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas       100 Jul 28 00:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 02:14:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 28 00:50 run_atlas
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas       105 Jul 28 00:50 job.xml
[2025-07-28 02:14:04] -rw-r--r--. 2 boincer umatlas 238502740 Jul 28 00:50 EVNT.45758398._000004.pool.root.1
[2025-07-28 02:14:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 00:50 start_atlas.sh
[2025-07-28 02:14:04] drwxrwx--x. 2 boincer umatlas      4096 Jul 28 00:50 shared
[2025-07-28 02:14:04] -rw-r--r--. 2 boincer umatlas    542888 Jul 28 00:50 input.tar.gz
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas         0 Jul 28 00:50 boinc_lockfile
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas      2552 Jul 28 00:50 pandaJob.out
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas    980125 Jul 28 00:50 agis_schedconf.cvmfs.json
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas   1593052 Jul 28 00:51 agis_ddmendpoints.agis.ALL.json
[2025-07-28 02:14:04] drwx------. 4 boincer umatlas      4096 Jul 28 00:51 pilot3
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas      6841 Jul 28 02:12 init_data.xml
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas       529 Jul 28 02:12 boinc_task_state.xml
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas 170687006 Jul 28 02:12 HITS.45758400._000129.pool.root.1
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas      1034 Jul 28 02:13 memory_monitor_summary.json
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas    359209 Jul 28 02:13 log.45758400._000129.job.log.tgz.1
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas      7808 Jul 28 02:13 heartbeat.json
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas        27 Jul 28 02:13 wrapper_checkpoint.txt
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas      8192 Jul 28 02:13 boinc_mmap_file
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas       823 Jul 28 02:14 pilotlog.txt
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas        95 Jul 28 02:14 pilot_heartbeat.json
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas    482309 Jul 28 02:14 log.45758400._000129.job.log.1
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas       357 Jul 28 02:14 output.list
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas       620 Jul 28 02:14 runtime_log
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas    860160 Jul 28 02:14 result.tar.gz
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas      8662 Jul 28 02:14 runtime_log.err
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas       654 Jul 28 02:14 mbHNDmqoR07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoWWLDmjvd9cm.diag
[2025-07-28 02:14:04] -rw-r--r--. 1 boincer umatlas     21912 Jul 28 02:14 stderr.txt
[2025-07-28 02:14:04] HITS file was successfully produced:
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas 170687006 Jul 28 02:12 shared/HITS.pool.root.1
[2025-07-28 02:14:04]  *** Contents of shared directory: ***
[2025-07-28 02:14:04] total 400992
[2025-07-28 02:14:04] -rw-r--r--. 2 boincer umatlas 238502740 Jul 28 00:50 ATLAS.root_0
[2025-07-28 02:14:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 28 00:50 start_atlas.sh
[2025-07-28 02:14:04] -rw-r--r--. 2 boincer umatlas    542888 Jul 28 00:50 input.tar.gz
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas 170687006 Jul 28 02:12 HITS.pool.root.1
[2025-07-28 02:14:04] -rw-------. 1 boincer umatlas    860160 Jul 28 02:14 result.tar.gz
02:14:06 (2168939): run_atlas exited; CPU time 53067.399265
02:14:06 (2168939): called boinc_finish(0)

</stderr_txt>
]]>

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